ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags25d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HAT1_ORYSA (Q6ES10) Probable acetyltransferase type B catalytic ... 273 2e-73
2HAT1_MAIZE (Q8LPU4) Histone acetyltransferase type B catalytic s... 265 4e-71
3HATB_ARATH (Q9FJT8) Histone acetyltransferase type B catalytic s... 127 2e-29
4HAT1_YARLI (Q6CC99) Histone acetyltransferase type B catalytic s... 35 0.092
5HAT1_ASHGO (Q750F5) Histone acetyltransferase type B catalytic s... 35 0.12
6HAT1_CRYNE (Q5KNS9) Histone acetyltransferase type B catalytic s... 33 0.46
7RL3R1_HUMAN (Q9NSD7) Relaxin-3 receptor 1 (RLN3 receptor 1) (Rel... 32 0.78
8HAT1_USTMA (Q4PBE6) Histone acetyltransferase type B catalytic s... 32 1.0
9IL1A_FELCA (O46613) Interleukin-1 alpha precursor (IL-1 alpha) 31 1.7
10BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTP... 31 2.3
11KPYK_CLOAB (O08309) Pyruvate kinase (EC 2.7.1.40) (PK) 30 3.0
12Y2873_GEOSL (P61404) UPF0313 protein GSU2873 30 3.0
13ALF_BUCAP (Q8K9B2) Fructose-bisphosphate aldolase class 2 (EC 4.... 30 5.0
14IL1A_CANFA (O46612) Interleukin-1 alpha precursor (IL-1 alpha) 30 5.0
15CFP1_HUMAN (Q8ND76) Cyclin fold protein 1 (Cyclin-box protein 1) 30 5.0
16SYN1_BOVIN (P17599) Synapsin-1 (Synapsin I) 29 6.6
17BAG5_CHICK (Q5F486) BAG family molecular chaperone regulator 5 (... 29 6.6
18GPNMB_RAT (Q6P7C7) Transmembrane glycoprotein NMB precursor 29 6.6
19HAT1_ASPFU (Q4X0W8) Histone acetyltransferase type B catalytic s... 29 6.6
20SRBP1_RAT (P56720) Sterol regulatory element-binding protein 1 (... 29 8.6
21FTSY_SYNY3 (P73930) Cell division protein ftsY homolog 29 8.6
22PURT_SYNY3 (Q55336) Phosphoribosylglycinamide formyltransferase ... 29 8.6
23HAT1_GIBZE (Q4I6A4) Histone acetyltransferase type B catalytic s... 29 8.6

>HAT1_ORYSA (Q6ES10) Probable acetyltransferase type B catalytic subunit (EC|
           2.3.1.48) (HAT B)
          Length = 466

 Score =  273 bits (699), Expect = 2e-73
 Identities = 130/170 (76%), Positives = 155/170 (91%)
 Frame = +3

Query: 3   MYDLTIEDPSDYLQYVRSSMDCLRLLTFEPIKPALGAMVLSLEQTNLSKRTHSLIMVPPA 182
           +YD+TIEDPSDYLQY+RSS+DCLRLLTF+PIKPAL +MV SL+ TNLSKRT SL MVPP+
Sbjct: 268 IYDVTIEDPSDYLQYIRSSIDCLRLLTFDPIKPALCSMVSSLKDTNLSKRTSSLKMVPPS 327

Query: 183 DLAETVRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFRACIYDRTKGELLGAASGTN 362
           DLAETVR KLKINKKQFLRCWEILIYL+LDAE+ K + NFRACIYDR KGE+LG ++G N
Sbjct: 328 DLAETVRQKLKINKKQFLRCWEILIYLNLDAEDRKSMDNFRACIYDRIKGEILGTSTGPN 387

Query: 363 GKRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQLNEL 512
           GKRLVQ+P++FDE+T FAV+WT++GGD D+QTV+QQPEDL TQE+QLNE+
Sbjct: 388 GKRLVQMPSNFDEETCFAVYWTQDGGDADDQTVEQQPEDLKTQEQQLNEV 437



to top

>HAT1_MAIZE (Q8LPU4) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48) (Histone acetyltransferase HAT B) (Histone
           acetyltransferase HAT-B-p50)
          Length = 468

 Score =  265 bits (678), Expect = 4e-71
 Identities = 128/170 (75%), Positives = 152/170 (89%)
 Frame = +3

Query: 3   MYDLTIEDPSDYLQYVRSSMDCLRLLTFEPIKPALGAMVLSLEQTNLSKRTHSLIMVPPA 182
           +YD+TIE PSDYLQYVRSS+DCLRLL F+PIKPALGA+VLSL++TNLSKR  SL MVPPA
Sbjct: 270 IYDVTIESPSDYLQYVRSSIDCLRLLMFDPIKPALGAIVLSLKETNLSKRAQSLRMVPPA 329

Query: 183 DLAETVRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFRACIYDRTKGELLGAASGTN 362
           DL ETVR KLKINKKQFLRCWEIL++L LD+++ K + NFRACIYDR KGE+LG+ASGTN
Sbjct: 330 DLMETVRQKLKINKKQFLRCWEILVFLSLDSQDHKSMDNFRACIYDRMKGEILGSASGTN 389

Query: 363 GKRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQLNEL 512
            KRL+Q+PTSF+++ SFAV+WT+E  DED QTV+QQPEDL TQE+QLNEL
Sbjct: 390 RKRLLQMPTSFNKEASFAVYWTQEIEDEDEQTVEQQPEDLKTQEQQLNEL 439



to top

>HATB_ARATH (Q9FJT8) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48) (HAT B)
          Length = 467

 Score =  127 bits (318), Expect = 2e-29
 Identities = 71/170 (41%), Positives = 107/170 (62%)
 Frame = +3

Query: 3   MYDLTIEDPSDYLQYVRSSMDCLRLLTFEPIKPALGAMVLSLEQTNLSKRTHSLIMVPPA 182
           +YDLT+E+PS+  Q++R+ +D  RL +F+PIKP + + V +L +  LSK+       PP 
Sbjct: 277 VYDLTVEEPSEKFQHIRTCIDINRLRSFDPIKPDIDSAVQTLTKGKLSKKAQIPRFTPPL 336

Query: 183 DLAETVRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFRACIYDRTKGELLGAASGTN 362
           +  E VR  LKINKKQFL+CWEILIYL LD  + K + ++ + I +  + ++LG    T 
Sbjct: 337 NAIEKVRESLKINKKQFLKCWEILIYLALDPID-KYMEDYTSVITNHVRTDILGKDIETP 395

Query: 363 GKRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQLNEL 512
            K++V VP+SF+ + SF VF +  G  E+  T  Q  E+   QE+QL +L
Sbjct: 396 KKQVVDVPSSFEPEASFVVFKSVNG--EEANTNVQVDENKPDQEQQLKQL 443



to top

>HAT1_YARLI (Q6CC99) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48)
          Length = 451

 Score = 35.4 bits (80), Expect = 0.092
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
 Frame = +3

Query: 3   MYDLTIEDPSDYLQYVRSSMDCLRLLTFEPIKPALGAMVLSLEQ------TNLSKRTHSL 164
           +Y++T+EDPS+    +R   D L+ L  +     +  M+ +          N + RT  +
Sbjct: 270 VYEITVEDPSEAFDDLRDRCD-LKWLADQGFPSEVFRMLQTTSAHGEKAGDNRTGRTKVV 328

Query: 165 IMVPPADLAETVRLKLKINKKQFLRCWEILIYLHLDAENP 284
                    E  RLK K+  +QF RC+E+++   L+  +P
Sbjct: 329 AGAFWTKWLEEHRLKYKLAHRQFARCFEMILLACLEVSSP 368



to top

>HAT1_ASHGO (Q750F5) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48)
          Length = 391

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 34/132 (25%), Positives = 54/132 (40%)
 Frame = +3

Query: 9   DLTIEDPSDYLQYVRSSMDCLRLLTFEPIKPALGAMVLSLEQTNLSKRTHSLIMVPPADL 188
           ++T+EDP++    +R   D +R                 L  + LS      + +P   L
Sbjct: 250 EVTVEDPNEAFDDLRDRCDFMR-----------------LSGSGLSSSIPEDVPIPRTWL 292

Query: 189 AETVRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFRACIYDRTKGELLGAASGTNGK 368
            E  R K K++  QF R  EI++   L   +P      +A +Y +    L G  S T   
Sbjct: 293 TEQAR-KYKLSLVQFTRLVEIIL---LYDNSPNFEIQVKARLYQKNHEVLTGMDSDTRKA 348

Query: 369 RLVQVPTSFDED 404
           +L +  TS  ED
Sbjct: 349 KLQEAFTSLKED 360



to top

>HAT1_CRYNE (Q5KNS9) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48)
          Length = 416

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 28/99 (28%), Positives = 46/99 (46%)
 Frame = +3

Query: 9   DLTIEDPSDYLQYVRSSMDCLRLLTFEPIKPALGAMVLSLEQTNLSKRTHSLIMVPPADL 188
           +LTIEDP++  + +R   D LR L    +K  +    +        KR   +      + 
Sbjct: 282 ELTIEDPAEAFEDLRDRND-LRFL----VKEGIVKDPMLYVDVGKGKRGSRV------EW 330

Query: 189 AETVRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFR 305
              +R K KI ++QF R  E+L++  LD  NP  +  +R
Sbjct: 331 ELAIRRKYKIAQRQFDRLLEMLLFRQLDKGNPDKVKAYR 369



to top

>RL3R1_HUMAN (Q9NSD7) Relaxin-3 receptor 1 (RLN3 receptor 1) (Relaxin family|
           peptide receptor 3) (Somatostatin- and angiotensin-like
           peptide receptor) (G protein-coupled receptor SALPR)
           (GPCR135)
          Length = 469

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
 Frame = +1

Query: 217 STRNSSCGAGKF*SIYTLMPKIPSASVTSGPASTTAPKVNY--------SAPPLEPTGSA 372
           +T N + G  K   +++L+P +  A+ TSG AS   P + +         APP  P GS 
Sbjct: 10  ATMNKAAGGDKLAELFSLVPDLLEAANTSGNASLQLPDLWWELGLELPDGAPPGHPPGSG 69

Query: 373 LSKCPLVLTRTRHLL 417
            ++      R R L+
Sbjct: 70  GAESADTEARVRILI 84



to top

>HAT1_USTMA (Q4PBE6) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48)
          Length = 448

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
 Frame = +3

Query: 9   DLTIEDPSDYLQYVRSSMDCLRLLTFEPIKPALGAMVLSLEQTNLSKRTHSLIMVPPADL 188
           +LT+EDPS+    +R   D  RLL       A G    S +  N   + H+ +     + 
Sbjct: 271 ELTVEDPSEDFDRLRDGNDLRRLL-------APGGFADSAKAQN---KLHAPL---DKEW 317

Query: 189 AETVRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFR----ACIYDRTKGELL 341
            E+ RL+ K+  +Q+ R  E++  ++LD  + + +  +R    A IY + K  L+
Sbjct: 318 IESQRLQHKLAPRQWSRVLEMVQLMNLDTTDHEQVKQYRLQVKARIYRQNKDILM 372



to top

>IL1A_FELCA (O46613) Interleukin-1 alpha precursor (IL-1 alpha)|
          Length = 270

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 366 KRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQL 503
           K + + P +  ++T+   FW + G     ++V      +ATQEEQL
Sbjct: 205 KEMPETPKTIRDETNLLFFWERHGSKNYFKSVAHPKLFIATQEEQL 250



to top

>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum|
           protein MSE55)
          Length = 391

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +1

Query: 265 TLMPKIPSASVTSGPASTTAPKVNYSAPPLEPTGSALSKCPLVLTRTRHLLCSGQRRAG 441
           T  P  P+A+  +  A+  AP  N SAP   PTG A +      + T H  C     AG
Sbjct: 235 TANPTGPAANPPATTANPPAPAANPSAPAATPTGPAANPPAPAASSTPHGHCPNGVTAG 293



to top

>KPYK_CLOAB (O08309) Pyruvate kinase (EC 2.7.1.40) (PK)|
          Length = 473

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +3

Query: 336 LLGAASGTNGKRL-VQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQLNE 509
           L+G+  G N   + +Q+P   ++D S  +F  KE  D  + +  ++PED+    + LNE
Sbjct: 150 LVGSHKGVNVPNVSIQLPAMTEKDKSDLIFGCKEEIDMVSASFIRKPEDVLAIRKVLNE 208



to top

>Y2873_GEOSL (P61404) UPF0313 protein GSU2873|
          Length = 605

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 25/101 (24%), Positives = 37/101 (36%)
 Frame = +3

Query: 69  LRLLTFEPIKPALGAMVLSLEQTNLSKRTHSLIMVPPADLAETVRLKLKINKKQFLRCWE 248
           LR+   +   P  G +   +  T L     + + VP  D  +              R  +
Sbjct: 509 LRVEQVQDFTPTPGTLSTCMYHTGLDPFAGAPVHVPRGDREK--------------RLQK 554

Query: 249 ILIYLHLDAENPKCIGNFRACIYDRTKGELLGAASGTNGKR 371
            L+  HL  E    +   RAC  +    ELLG A+G  G R
Sbjct: 555 ALLLWHLPTERRNVLDALRACGRESVARELLGGAAGGGGGR 595



to top

>ALF_BUCAP (Q8K9B2) Fructose-bisphosphate aldolase class 2 (EC 4.1.2.13)|
           (Fructose-bisphosphate aldolase class II) (FBP aldolase)
          Length = 359

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 191 GQVSRRNHYQTVSSFRQVGLL*RQDHSTKRRLDWLKG 81
           G +S   H   +S + Q+ ++   DH +K  L W+ G
Sbjct: 86  GSISGAQHVHLMSQYYQIPVILHTDHCSKEMLPWIDG 122



to top

>IL1A_CANFA (O46612) Interleukin-1 alpha precursor (IL-1 alpha)|
          Length = 265

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +3

Query: 366 KRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQL 503
           K + + P +  ++T+   FW + G     ++V Q    +ATQE +L
Sbjct: 200 KEMPETPKTIRDETNLLFFWERHGSKHYFKSVAQPKLFIATQERKL 245



to top

>CFP1_HUMAN (Q8ND76) Cyclin fold protein 1 (Cyclin-box protein 1)|
          Length = 341

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 14/106 (13%)
 Frame = +3

Query: 9   DLTIEDPSDYLQYV--RSSMDCLRLLTFEPIKPALGAMVLSLEQTNLSKRTHSLIMV--P 176
           DL+ ED    LQ++  R ++D L +       P    + LS  QT++ ++  SL +   P
Sbjct: 31  DLSREDTGCNLQHISDRENIDDLNMEFNPSDHPRASTIFLSKSQTDVREKRKSLFINHHP 90

Query: 177 PADLAETVRLKLKI----------NKKQFLRCWEILIYLHLDAENP 284
           P  +A        I          N K  ++C  + IY H+   +P
Sbjct: 91  PGQIARKYSSCSTIFLDDSTVSQPNLKYTIKCVALAIYYHIKNRDP 136



to top

>SYN1_BOVIN (P17599) Synapsin-1 (Synapsin I)|
          Length = 706

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 274 PKIPSASVTSGPASTTAPKVNYSAPPLEP 360
           P  PS   T+GPA+ TA + + +AP   P
Sbjct: 35  PAAPSPGATTGPATATAERASSAAPVASP 63



to top

>BAG5_CHICK (Q5F486) BAG family molecular chaperone regulator 5|
           (BCL2-associated athanogene 5) (BAG-5)
          Length = 450

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
 Frame = +3

Query: 51  RSSMDCLRLLTFEPIKPALGAMVLSLEQTNLSKRTHSLIMVPPADLA----ETVRLKLKI 218
           R+ ++   L+T+  +K ALG   +  EQT    ++H  +     +L+    E +      
Sbjct: 334 RAVIEVQTLITYIDLKEALGKRQMYAEQTAAEHQSHKAVWTVLGNLSQIQQEVISFDGNK 393

Query: 219 NKKQFLRCWEILI--YLHLDAENPK 287
             K ++R  E+L    L LDA +P+
Sbjct: 394 TDKNYMRLEELLTKQLLALDAVDPQ 418



to top

>GPNMB_RAT (Q6P7C7) Transmembrane glycoprotein NMB precursor|
          Length = 572

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 283 PSASVTSGPASTTAPKVNYSAPPLEPTG 366
           PS+S +  PAS+ +P ++  +P L PTG
Sbjct: 330 PSSSTSPSPASSPSPTLSTPSPSLMPTG 357



to top

>HAT1_ASPFU (Q4X0W8) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48)
          Length = 570

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
 Frame = +3

Query: 9   DLTIEDPSDYLQYVRSSMDCLRLLTFEPIKPALGAMVLSLEQTNLSKRTHSL--IMVPPA 182
           +LT+EDP++    +R S D   +L  E IK  +       E  + ++R   +    + P 
Sbjct: 343 ELTVEDPNEAFDVLRDSAD-YHILRPEFIKHEVNINPDPYEAHSRNQRPRRVPTAALIPV 401

Query: 183 DLAETVRLKLKINKKQFLRCWEILIYLHLDAEN 281
            L   +R   KI+  QF    E+ +   +  +N
Sbjct: 402 KLLHDIRTSYKIDSTQFAHILEMFLLSQIPLKN 434



to top

>SRBP1_RAT (P56720) Sterol regulatory element-binding protein 1 (SREBP-1)|
           (Sterol regulatory element-binding transcription factor
           1) (Adipocyte determination- and
           differentiation-dependent factor 1) (ADD1) (Fragment)
          Length = 1024

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +1

Query: 274 PKIPSASVTSGPASTTAPKVNYSAPPLEPTGSALSKCPLVLT 399
           PK+  A ++  P++ TA K+  S PP  P G  + + P+ LT
Sbjct: 65  PKVTPAPLSPPPSAPTAVKMYPSVPPFSP-GPGIKEEPVPLT 105



to top

>FTSY_SYNY3 (P73930) Cell division protein ftsY homolog|
          Length = 504

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 13/63 (20%), Positives = 30/63 (47%)
 Frame = +3

Query: 24  DPSDYLQYVRSSMDCLRLLTFEPIKPALGAMVLSLEQTNLSKRTHSLIMVPPADLAETVR 203
           +P DYLQ+ +++   ++    E + P   A  +++E   + +    +++ P +D A    
Sbjct: 66  NPDDYLQWAKAAYQNIQARKAETVSPPESAAAITVE-AGIEETAEEIVVAPESDQATATE 124

Query: 204 LKL 212
             L
Sbjct: 125 ADL 127



to top

>PURT_SYNY3 (Q55336) Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)|
           (GART 2) (GAR transformylase 2)
           (5'-phosphoribosylglycinamide transformylase 2)
           (Formate-dependent GAR transformylase)
          Length = 391

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -2

Query: 299 VTDALG---IFGIKV*IDQNFPAPQELFLVDLQLQPHSLGQVS 180
           VTDALG   IFG++      F  P+E+   +L  +PH  G V+
Sbjct: 251 VTDALGGAGIFGVEF-----FITPEEVIFSELSPRPHDTGMVT 288



to top

>HAT1_GIBZE (Q4I6A4) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48)
          Length = 478

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 24/93 (25%), Positives = 43/93 (46%)
 Frame = +3

Query: 6   YDLTIEDPSDYLQYVRSSMDCLRLLTFEPIKPALGAMVLSLEQTNLSKRTHSLIMVPPAD 185
           Y+ T+EDP++    +R   D    L F    P    +++      + K+     ++  + 
Sbjct: 286 YEFTVEDPNEAFDDLRDICD----LQFLRKMPEFNNLLVDTN-IKIPKKGFLPKLIIGSS 340

Query: 186 LAETVRLKLKINKKQFLRCWEILIYLHLDAENP 284
           L E +RL+ KI  +QF R  E    +HL ++ P
Sbjct: 341 LLEEIRLRAKIAPRQFGRVLE----MHLMSKLP 369


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,700,935
Number of Sequences: 219361
Number of extensions: 1496518
Number of successful extensions: 5054
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5033
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top