ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags25c19 |
|---|---|
| Clone Library Name | barley_pub |
>LIP_STAHY (P04635) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)| [Contains: Lipase 86 kDa form; Lipase 46 kDa form] Length = 641 Score = 36.2 bits (82), Expect = 0.031 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 15/69 (21%) Frame = +1 Query: 55 WDEQNPVHFVGHSAGAQVVRVLHQML-----AEKAFP---GHDTSE-------DWVLSLT 189 W +PVHF+GHS G Q +R+L L AE A+ G SE + V S+T Sbjct: 357 WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSIT 416 Query: 190 SLSGALNGT 216 +++ NGT Sbjct: 417 TIATPHNGT 425
>LIP1_STAAR (Q6GDD3) Lipase 1 precursor (EC 3.1.1.3) (Glycerol ester hydrolase| 1) Length = 680 Score = 33.9 bits (76), Expect = 0.16 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 15/74 (20%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQMLA---------EKAFPGH------DTSEDW 174 G Y W VH VGHS G Q +R L ++L +K G +++ Sbjct: 391 GIYKDWKPGQKVHLVGHSMGGQTIRQLEELLRNGSREEIEYQKKHSGEISPLFKGNNDNM 450 Query: 175 VLSLTSLSGALNGT 216 + S+T+L NGT Sbjct: 451 ISSITTLGTPHNGT 464
>LIP2_STAAR (Q6GJZ6) Lipase 2 precursor (EC 3.1.1.3) (Glycerol ester hydrolase| 2) Length = 691 Score = 33.9 bits (76), Expect = 0.16 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQML 132 G P W+ VH VGHS G Q +R++ + L Sbjct: 396 GIMPNWEPGKKVHLVGHSMGGQTIRLMEEFL 426
>LIP2_STAAN (Q7A7P2) Lipase 2 precursor (EC 3.1.1.3) (Glycerol ester hydrolase| 2) Length = 691 Score = 33.9 bits (76), Expect = 0.16 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQML 132 G P W+ VH VGHS G Q +R++ + L Sbjct: 396 GIMPNWEPGKKVHLVGHSMGGQTIRLMEEFL 426
>LIP2_STAAM (Q99WQ6) Lipase 2 precursor (EC 3.1.1.3) (Glycerol ester hydrolase| 2) Length = 691 Score = 33.9 bits (76), Expect = 0.16 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQML 132 G P W+ VH VGHS G Q +R++ + L Sbjct: 396 GIMPNWEPGKKVHLVGHSMGGQTIRLMEEFL 426
>LIP2_STAAW (Q8NYC2) Lipase 2 precursor (EC 3.1.1.3) (Glycerol ester hydrolase| 2) Length = 690 Score = 33.9 bits (76), Expect = 0.16 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQML 132 G P W+ VH VGHS G Q +R++ + L Sbjct: 395 GIMPNWEPGKKVHLVGHSMGGQTIRLMEEFL 425
>LIP2_STAAU (P10335) Lipase 2 precursor (EC 3.1.1.3) (Glycerol ester hydrolase| 2) Length = 690 Score = 33.9 bits (76), Expect = 0.16 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQML 132 G P W+ VH VGHS G Q +R++ + L Sbjct: 395 GIMPNWEPGKKVHLVGHSMGGQTIRLMEEFL 425
>LIP2_STAAS (Q6GCF1) Lipase 2 precursor (EC 3.1.1.3) (Glycerol ester hydrolase| 2) Length = 690 Score = 33.9 bits (76), Expect = 0.16 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQML 132 G P W+ VH VGHS G Q +R++ + L Sbjct: 395 GIMPNWEPGKKVHLVGHSMGGQTIRLMEEFL 425
>LIP2_STAAC (Q5HJ48) Lipase 2 precursor (EC 3.1.1.3) (Glycerol ester hydrolase| 2) Length = 690 Score = 33.9 bits (76), Expect = 0.16 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQML 132 G P W+ VH VGHS G Q +R++ + L Sbjct: 395 GIMPNWEPGKKVHLVGHSMGGQTIRLMEEFL 425
>LIP1_STAAN (P65289) Lipase 1 precursor (EC 3.1.1.3) (Glycerol ester hydrolase| 1) Length = 680 Score = 33.5 bits (75), Expect = 0.20 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 15/74 (20%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQMLA---------EKAFPGH------DTSEDW 174 G Y W VH VGHS G Q +R L ++L +K G +++ Sbjct: 391 GIYKDWKPGQKVHLVGHSMGGQTIRQLEELLRNGNREEIEYQKKHGGEISPLFKGNNDNM 450 Query: 175 VLSLTSLSGALNGT 216 + S+T+L NGT Sbjct: 451 ISSITTLGTPHNGT 464
>LIP1_STAAM (P65288) Lipase 1 precursor (EC 3.1.1.3) (Glycerol ester hydrolase| 1) Length = 680 Score = 33.5 bits (75), Expect = 0.20 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 15/74 (20%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQMLA---------EKAFPGH------DTSEDW 174 G Y W VH VGHS G Q +R L ++L +K G +++ Sbjct: 391 GIYKDWKPGQKVHLVGHSMGGQTIRQLEELLRNGNREEIEYQKKHGGEISPLFKGNNDNM 450 Query: 175 VLSLTSLSGALNGT 216 + S+T+L NGT Sbjct: 451 ISSITTLGTPHNGT 464
>LIP1_STAAW (Q8NUI5) Lipase 1 precursor (EC 3.1.1.3) (Glycerol ester hydrolase| 1) Length = 680 Score = 33.1 bits (74), Expect = 0.27 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQML 132 G Y W VH VGHS G Q +R L ++L Sbjct: 391 GIYKDWKPGQKVHLVGHSMGGQTIRQLEELL 421
>LIP1_STAAS (Q6G604) Lipase 1 precursor (EC 3.1.1.3) (Glycerol ester hydrolase| 1) Length = 680 Score = 33.1 bits (74), Expect = 0.27 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQML 132 G Y W VH VGHS G Q +R L ++L Sbjct: 391 GIYKDWKPGQKVHLVGHSMGGQTIRQLEELL 421
>LIP1_STAAC (Q5HCM7) Lipase 1 precursor (EC 3.1.1.3) (Glycerol ester hydrolase| 1) Length = 680 Score = 33.1 bits (74), Expect = 0.27 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQML 132 G Y W VH VGHS G Q +R L ++L Sbjct: 391 GIYKDWKPGQKVHLVGHSMGGQTIRQLEELL 421
>LIP_STAES (P0C0R4) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase)| Length = 688 Score = 32.7 bits (73), Expect = 0.35 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQML 132 G Y W +H VGHS G Q +R L ++L Sbjct: 401 GVYKDWKPGQKIHLVGHSMGGQTIRQLEELL 431
>LIP_STAEQ (Q5HKP6) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase)| Length = 688 Score = 32.7 bits (73), Expect = 0.35 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQML 132 G Y W +H VGHS G Q +R L ++L Sbjct: 401 GVYKDWKPGQKIHLVGHSMGGQTIRQLEELL 431
>LIP_STAEP (P0C0R3) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase)| Length = 688 Score = 32.7 bits (73), Expect = 0.35 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 40 GHYPVWDEQNPVHFVGHSAGAQVVRVLHQML 132 G Y W +H VGHS G Q +R L ++L Sbjct: 401 GVYKDWKPGQKIHLVGHSMGGQTIRQLEELL 431
>CT022_MOUSE (Q99LR1) Protein C20orf22 homolog| Length = 398 Score = 29.3 bits (64), Expect = 3.8 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Frame = +1 Query: 1 SMGTLASAGI-YDTGHYPVWDE----QNPVHFVGHSAGAQVVRVLHQMLAEKAFP 150 S+GT + G+ YD H W + NPV+ GHS G V L + L E+ P Sbjct: 211 SVGTPSERGMTYDALHVFDWIKARSGDNPVYIWGHSLGTGVATNLVRRLCERETP 265
>CT022_HUMAN (Q8N2K0) Protein C20orf22| Length = 398 Score = 29.3 bits (64), Expect = 3.8 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Frame = +1 Query: 1 SMGTLASAGI-YDTGHYPVWDE----QNPVHFVGHSAGAQVVRVLHQMLAEKAFP 150 S+GT + G+ YD H W + NPV+ GHS G V L + L E+ P Sbjct: 211 SVGTPSERGMTYDALHVFDWIKARSGDNPVYIWGHSLGTGVATNLVRRLCERETP 265
>SAT_ARCFU (O28606) Sulfate adenylyltransferase (EC 2.7.7.4) (Sulfate| adenylate transferase) (SAT) (ATP-sulfurylase) Length = 456 Score = 28.5 bits (62), Expect = 6.6 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = -1 Query: 288 ELKKTN*FHGSPIFSQHAVVVSPCGSIKRA*QGSKAQNPVFRSIMPRESLLSEHLMQHP 112 ELK T G+PI + ++S C +GS QN + R ++ LLSE + +P Sbjct: 36 ELKPTTLPDGTPIRHVYREIMSVCYGFFSPVEGSMVQNELER-VLNERRLLSEWIFPYP 93
>ATG9_MAGGR (Q51WZ9) Autophagy-related protein 9| Length = 917 Score = 28.1 bits (61), Expect = 8.6 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 5/54 (9%) Frame = -1 Query: 195 QGSKAQNPVFRSIMPRESLLSEHLMQHPHNLRA-----RRVPHEVHRVLLVPHR 49 QGS+ + P FR+ MP+ S ++ L+ PH+ A R H R + VPHR Sbjct: 782 QGSQGRTPQFRTPMPQPSPMASILLD-PHHQPAPGAFGSRSMHR-SRQMAVPHR 833
>ILF2_XENTR (Q6P8G1) Interleukin enhancer-binding factor 2 homolog| Length = 388 Score = 28.1 bits (61), Expect = 8.6 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = +1 Query: 55 WDEQNPVHFVGHSAGAQVVRVLHQMLAEKAFPGHDTSEDWVLSLTSLSGALNGTTR 222 W E+N HS ++R+L + + FPG + W+L L +N TR Sbjct: 209 WFEEN----ASHSTVKVLIRLLKDLRSR--FPGFEPLTPWILDLLGHYAVMNNPTR 258
>RS15_ONYPE (Q6YR80) 30S ribosomal protein S15| Length = 74 Score = 28.1 bits (61), Expect = 8.6 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -1 Query: 138 LSEHLMQHPHNLRARR 91 LSEHL QHPH+ ++R Sbjct: 39 LSEHLKQHPHDFHSKR 54
>DYH1A_CHLRE (Q9SMH3) Dynein-1-alpha heavy chain, flagellar inner arm I1 complex| (1-alpha DHC) (Dynein-1, subspecies f) Length = 4625 Score = 28.1 bits (61), Expect = 8.6 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 5/104 (4%) Frame = +1 Query: 46 YPVWDEQNPVHFVGHSAGAQVVRVLHQMLAEKAFPGHDTS----EDWVLSLTSLSGALNG 213 Y V ++ VG + G + V +L+ + + G T +S+ L G L+ Sbjct: 2229 YEVMMTRHTTMVVGQTGGGKTV-ILNTLARAQTKLGKKTHLYTINPKAISVAELYGVLDK 2287 Query: 214 TTRTYYDGMLAEDGRSMKSICLLQLCRLGVIVYDW-LDIPWLKN 342 TR + DG+L+ R M + +V+D +D W++N Sbjct: 2288 DTRDWTDGLLSNIFREMNKPLPAERDEARYLVFDGDVDAVWVEN 2331
>GBLP_ORYSA (P49027) Guanine nucleotide-binding protein beta subunit-like| protein (GPB-LR) (RWD) Length = 334 Score = 28.1 bits (61), Expect = 8.6 Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Frame = +1 Query: 52 VWDEQNPVHFVGHSAGAQVVRVLHQMLAEKAFPGHD-TSEDWVLSLT---SLSGALNGTT 219 VWD NPV VG AGA V + L GH +D VLS +LSG+ +G Sbjct: 45 VWDLTNPVQNVGEGAGASEYGVPFRRLT-----GHSHFVQDVVLSSDGQFALSGSWDGEL 99 Query: 220 RTY 228 R + Sbjct: 100 RLW 102
>CSPG3_MOUSE (P55066) Neurocan core protein precursor (Chondroitin sulfate| proteoglycan 3) Length = 1268 Score = 28.1 bits (61), Expect = 8.6 Identities = 18/60 (30%), Positives = 20/60 (33%) Frame = -1 Query: 249 FSQHAVVVSPCGSIKRA*QGSKAQNPVFRSIMPRESLLSEHLMQHPHNLRARRVPHEVHR 70 FSQH V C + K P I PR S HPH R H H+ Sbjct: 1200 FSQHRVATIRCRN------NGKWDRPQIMCIKPRRSHRMRRHHHHPHRHHKPRKEHRKHK 1253
>PLSX_SYMTH (Q67PG1) Fatty acid/phospholipid synthesis protein plsX| Length = 346 Score = 28.1 bits (61), Expect = 8.6 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Frame = +1 Query: 46 YPVWDEQNPVHFVGHSAGAQVVRVLHQMLAEKAFPGH---DTSEDWVLSL-TSLSGALNG 213 YP+ E +HF+G+ V ++ FPG+ T E ++L SL AL G Sbjct: 197 YPLLQELPSIHFIGNIEARDVPFGGADVVVADGFPGNVLLKTYEGVAMALFQSLKEALTG 256 Query: 214 TTRTYYDGMLAEDG 255 + T LA+ G Sbjct: 257 SPLTAVGAALAKPG 270 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,092,460 Number of Sequences: 219361 Number of extensions: 1165523 Number of successful extensions: 3204 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 3128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3202 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
