ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags25c15 |
|---|---|
| Clone Library Name | barley_pub |
>OSBL6_MOUSE (Q8BXR9) Oxysterol-binding protein-related protein 6 (OSBP-related| protein 6) (ORP-6) Length = 959 Score = 51.2 bits (121), Expect = 8e-07 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = +1 Query: 22 PFNPILGETYEMVNH-QGITFIAEQVSHHXPMGVAHC 129 PFNP+LGETYE + +G F +EQVSHH P+ HC Sbjct: 672 PFNPVLGETYECIREDKGFRFFSEQVSHHPPISACHC 708
>OSBL6_HUMAN (Q9BZF3) Oxysterol-binding protein-related protein 6 (OSBP-related| protein 6) (ORP-6) Length = 934 Score = 51.2 bits (121), Expect = 8e-07 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = +1 Query: 22 PFNPILGETYEMVNH-QGITFIAEQVSHHXPMGVAHC 129 PFNP+LGETYE + +G F +EQVSHH P+ HC Sbjct: 647 PFNPVLGETYECIREDKGFRFFSEQVSHHPPISACHC 683
>OSBL2_HUMAN (Q9H1P3) Oxysterol-binding protein-related protein 2 (OSBP-related| protein 2) (ORP-2) Length = 480 Score = 50.8 bits (120), Expect = 1e-06 Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 1/38 (2%) Frame = +1 Query: 16 GXPFNPILGETYEMVNHQ-GITFIAEQVSHHXPMGVAH 126 G PFNP+LGETYE++ G FI+EQVSHH P+ H Sbjct: 149 GKPFNPLLGETYELIREDLGFRFISEQVSHHPPISAFH 186
>YB35_SCHPO (O14340) Oxysterol-binding protein homolog C2F12.05c| Length = 1310 Score = 50.1 bits (118), Expect = 2e-06 Identities = 23/36 (63%), Positives = 27/36 (75%), Gaps = 1/36 (2%) Frame = +1 Query: 22 PFNPILGETYEMVNHQ-GITFIAEQVSHHXPMGVAH 126 PFNP+LGETYE + Q G FI EQVSHH P+G A+ Sbjct: 1013 PFNPLLGETYEFCHPQRGFRFIVEQVSHHPPVGAAY 1048
>OSBL3_MOUSE (Q9DBS9) Oxysterol-binding protein-related protein 3 (OSBP-related| protein 3) (ORP-3) Length = 855 Score = 48.9 bits (115), Expect = 4e-06 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Frame = +1 Query: 22 PFNPILGETYEMVNH-QGITFIAEQVSHHXPMGVAH 126 PFNP+LGETYE + +G F AEQVSHH P+ H Sbjct: 572 PFNPVLGETYECIRQDKGFQFFAEQVSHHPPISACH 607
>OSBL1_RAT (Q8K4M9) Oxysterol-binding protein-related protein 1 (OSBP-related| protein 1) (ORP-1) Length = 950 Score = 48.5 bits (114), Expect = 5e-06 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Frame = +1 Query: 16 GXPFNPILGETYEMVNHQ-GITFIAEQVSHHXPMGVAH 126 G PFNP+LGETYE+V G I+EQVSHH P+ H Sbjct: 622 GKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFH 659
>OSBL1_MOUSE (Q91XL9) Oxysterol-binding protein-related protein 1 (OSBP-related| protein 1) (ORP-1) Length = 950 Score = 48.5 bits (114), Expect = 5e-06 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Frame = +1 Query: 16 GXPFNPILGETYEMVNHQ-GITFIAEQVSHHXPMGVAH 126 G PFNP+LGETYE+V G I+EQVSHH P+ H Sbjct: 622 GKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFH 659
>OSBL1_HUMAN (Q9BXW6) Oxysterol-binding protein-related protein 1 (OSBP-related| protein 1) (ORP-1) Length = 950 Score = 48.5 bits (114), Expect = 5e-06 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Frame = +1 Query: 16 GXPFNPILGETYEMVNHQ-GITFIAEQVSHHXPMGVAH 126 G PFNP+LGETYE+V G I+EQVSHH P+ H Sbjct: 622 GKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFH 659
>OSBL2_MOUSE (Q8BX94) Oxysterol-binding protein-related protein 2 (OSBP-related| protein 2) (ORP-2) Length = 484 Score = 48.5 bits (114), Expect = 5e-06 Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 1/34 (2%) Frame = +1 Query: 16 GXPFNPILGETYEMVNHQ-GITFIAEQVSHHXPM 114 G PFNP+LGETYE++ G FI+EQVSHH P+ Sbjct: 149 GKPFNPLLGETYELIREDLGFRFISEQVSHHPPI 182
>OSBL3_HUMAN (Q9H4L5) Oxysterol-binding protein-related protein 3 (OSBP-related| protein 3) (ORP-3) Length = 887 Score = 47.8 bits (112), Expect = 9e-06 Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Frame = +1 Query: 22 PFNPILGETYEMVNH-QGITFIAEQVSHHXPMGVAH 126 PFNP+LGETYE + +G F +EQVSHH P+ H Sbjct: 604 PFNPVLGETYECIREDKGFQFFSEQVSHHPPISACH 639
>OSBL7_HUMAN (Q9BZF2) Oxysterol-binding protein-related protein 7 (OSBP-related| protein 7) (ORP-7) Length = 842 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Frame = +1 Query: 22 PFNPILGETYEMVN-HQGITFIAEQVSHHXPMGVAH 126 PFNP+LGETYE +G FI+EQVSHH P+ H Sbjct: 555 PFNPVLGETYECERPDRGFRFISEQVSHHPPISACH 590
>OSBP2_MOUSE (Q5QNQ6) Oxysterol-binding protein 2| Length = 908 Score = 44.3 bits (103), Expect = 1e-04 Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 4/45 (8%) Frame = +1 Query: 4 TTVH--GXPFNPILGETYEM--VNHQGITFIAEQVSHHXPMGVAH 126 TTVH PFNP+LGET+E+ + G+ + EQVSHH P H Sbjct: 587 TTVHRIAKPFNPMLGETFELDRMEDMGLRSLCEQVSHHPPSAAHH 631
>OSBP2_HUMAN (Q969R2) Oxysterol-binding protein 2 (Oxysterol-binding| protein-related protein 4) (OSBP-related protein 4) (ORP-4) Length = 916 Score = 42.7 bits (99), Expect = 3e-04 Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 4/40 (10%) Frame = +1 Query: 4 TTVH--GXPFNPILGETYEM--VNHQGITFIAEQVSHHXP 111 TTVH PFNP+LGET+E+ ++ G+ + EQVSHH P Sbjct: 590 TTVHRIAKPFNPMLGETFELDRLDDMGLRSLCEQVSHHPP 629
>OSBP1_HUMAN (P22059) Oxysterol-binding protein 1| Length = 807 Score = 40.8 bits (94), Expect = 0.001 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 22 PFNPILGETYEM--VNHQGITFIAEQVSHHXPMGVAH 126 PFNP+LGET+E+ + G + EQVSHH P H Sbjct: 494 PFNPLLGETFELDRLEENGYRSLCEQVSHHPPAAAHH 530
>OSBP1_RABIT (P16258) Oxysterol-binding protein 1| Length = 809 Score = 40.8 bits (94), Expect = 0.001 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 22 PFNPILGETYEM--VNHQGITFIAEQVSHHXPMGVAH 126 PFNP+LGET+E+ + G + EQVSHH P H Sbjct: 496 PFNPLLGETFELDRLEENGYRSLCEQVSHHPPAAAHH 532
>OSH1_YEAST (P35845) Oxysterol-binding protein homolog 1| Length = 1188 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = +1 Query: 22 PFNPILGETYEMVNHQG-ITFIAEQVSHHXPM 114 PFNP+LGET+E G F EQVSHH P+ Sbjct: 875 PFNPLLGETFEYARTDGQYRFFTEQVSHHPPI 906
>OSBL5_HUMAN (Q9H0X9) Oxysterol-binding protein-related protein 5 (OSBP-related| protein 5) (ORP-5) Length = 879 Score = 37.0 bits (84), Expect = 0.015 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 5/40 (12%) Frame = +1 Query: 22 PFNPILGETYEMVNHQGIT-----FIAEQVSHHXPMGVAH 126 P+NPILGET+ T +IAEQVSHH P+ H Sbjct: 447 PYNPILGETFRCCWFHPQTDSRTFYIAEQVSHHPPVSAFH 486
>OSH2_YEAST (Q12451) Oxysterol-binding protein homolog 2| Length = 1283 Score = 36.6 bits (83), Expect = 0.020 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = +1 Query: 22 PFNPILGETYEMVN-HQGITFIAEQVSHHXPM 114 PFNP+LGET+E + F EQVSHH P+ Sbjct: 973 PFNPLLGETFEYSRPDKQYRFFTEQVSHHPPI 1004
>OSBL8_HUMAN (Q9BZF1) Oxysterol-binding protein-related protein 8 (OSBP-related| protein 8) (ORP-8) Length = 889 Score = 35.8 bits (81), Expect = 0.034 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 5/36 (13%) Frame = +1 Query: 22 PFNPILGETYEMV-----NHQGITFIAEQVSHHXPM 114 P+NPILGET+ + + +IAEQVSHH P+ Sbjct: 483 PYNPILGETFRCLWIHPRTNSKTFYIAEQVSHHPPI 518
>OSH3_YEAST (P38713) Oxysterol-binding protein homolog 3| Length = 996 Score = 35.8 bits (81), Expect = 0.034 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%) Frame = +1 Query: 22 PFNPILGETYEMVNH-QGITFIAEQVSHHXPM 114 PFNP+L ET+E++ G I+E+VSH P+ Sbjct: 718 PFNPLLAETFELIREDMGFRLISEKVSHRPPV 749
>OBPAL_CANAL (Q9UW21) Oxysterol-binding protein-like protein OBPalpha| Length = 429 Score = 35.0 bits (79), Expect = 0.058 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 5/35 (14%) Frame = +1 Query: 22 PFNPILGETY-----EMVNHQGITFIAEQVSHHXP 111 P NP+LGE + E+ N++ +++EQ+SHH P Sbjct: 121 PLNPVLGEVFTCYWDELPNNKSAYYLSEQISHHPP 155
>OSH7_YEAST (P38755) Oxysterol-binding protein homolog 7| Length = 437 Score = 34.7 bits (78), Expect = 0.076 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%) Frame = +1 Query: 22 PFNPILGETY----EMVNHQGITFIAEQVSHHXP 111 P NPILGE + ++ N Q +IAEQ SHH P Sbjct: 127 PLNPILGEHFTAYWDLPNKQQAFYIAEQTSHHPP 160
>OSBL5_MOUSE (Q9ER64) Oxysterol-binding protein-related protein 5 (OSBP-related| protein 5) (ORP-5) (Oxysterol-binding protein homolog 1) Length = 874 Score = 34.7 bits (78), Expect = 0.076 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 5/36 (13%) Frame = +1 Query: 22 PFNPILGETYEM-----VNHQGITFIAEQVSHHXPM 114 P+NPILGET+ + +IAEQVSHH P+ Sbjct: 446 PYNPILGETFRCRWLHPQTNSHTFYIAEQVSHHPPV 481
>OSBL9_HUMAN (Q96SU4) Oxysterol-binding protein-related protein 9 (OSBP-related| protein 9) (ORP-9) Length = 736 Score = 34.3 bits (77), Expect = 0.099 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 22/53 (41%) Frame = +1 Query: 22 PFNPILGETYEM----------------------VNHQGITFIAEQVSHHXPM 114 P+NPILGE ++ V+ +TF+AEQVSHH P+ Sbjct: 453 PYNPILGEIFQCHWTLPNDTEENTELVSEGPVPWVSKNSVTFVAEQVSHHPPI 505
>OSH6_YEAST (Q02201) Oxysterol-binding protein homolog 6| Length = 448 Score = 33.1 bits (74), Expect = 0.22 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%) Frame = +1 Query: 22 PFNPILGETY----EMVNHQGITFIAEQVSHHXP 111 P NP+LGE + ++ N Q +I+EQ SHH P Sbjct: 127 PLNPVLGEYFTAYWDLPNKQQAYYISEQTSHHPP 160
>YGV7_SCHPO (O43021) Oxysterol-binding protein homolog C354.07c| Length = 399 Score = 33.1 bits (74), Expect = 0.22 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%) Frame = +1 Query: 22 PFNPILGETY--EMVNHQG-ITFIAEQVSHHXPMGVAH 126 P NPILGE + + +G + AEQVSHH P AH Sbjct: 110 PLNPILGELFYGSWDSSKGKVELTAEQVSHHGPESAAH 147
>KES1_USTMA (P0C199) Protein KES1| Length = 383 Score = 32.0 bits (71), Expect = 0.49 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 5/40 (12%) Frame = +1 Query: 22 PFNPILGETY-----EMVNHQGITFIAEQVSHHXPMGVAH 126 P NPILGE + + + T AEQVSHH P+ H Sbjct: 102 PLNPILGELFLGKWPDKNDRGETTLTAEQVSHHPPVTAYH 141
>OBPA_CANAL (Q9UW25) Oxysterol-binding protein-like protein OBPa| Length = 433 Score = 31.6 bits (70), Expect = 0.64 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 5/35 (14%) Frame = +1 Query: 22 PFNPILGETYE-----MVNHQGITFIAEQVSHHXP 111 P NP+LGET+ + + +I+EQVSHH P Sbjct: 125 PLNPVLGETFNCYWENISDDCSAYYISEQVSHHPP 159
>YEH1_SCHPO (O13944) Oxysterol-binding protein homolog C23H4.01c| Length = 945 Score = 30.0 bits (66), Expect = 1.9 Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%) Frame = +1 Query: 25 FNPILGETYEMVNH-QGITFIAEQVSH 102 F+P+LGET+E+V + F+AE+V H Sbjct: 651 FSPLLGETFELVREDRNYRFLAEKVCH 677
>OSB10_HUMAN (Q9BXB5) Oxysterol-binding protein-related protein 10 (OSBP-related| protein 10) (ORP-10) Length = 764 Score = 29.6 bits (65), Expect = 2.4 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +1 Query: 1 PTTVHGXPFNPILGETYEMVNHQGITFIAEQVSHHXPMGVAHC 129 P + H P ++Y++ F+AEQVSHH P+ +C Sbjct: 508 PASCHEHPMADDPSKSYKL------RFVAEQVSHHPPISCFYC 544
>HES1_YEAST (P35843) Protein HES1 (Oxysterol-binding protein homolog 5)| Length = 434 Score = 28.5 bits (62), Expect = 5.4 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 7/38 (18%) Frame = +1 Query: 22 PFNPILGETY-------EMVNHQGITFIAEQVSHHXPM 114 P NP LGE + E ++EQVSHH PM Sbjct: 110 PLNPFLGEVFVGKWKNDEHPEFGETVLLSEQVSHHPPM 147
>KES1_SCHPO (O74178) Protein kes1| Length = 388 Score = 28.5 bits (62), Expect = 5.4 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Frame = +1 Query: 22 PFNPILGETYEMVNHQGI----TFIAEQVSHHXPMGVAH 126 P NPILGE + + I +EQVSHH P+ H Sbjct: 111 PLNPILGELFTGKWNTDIGEDTELTSEQVSHHPPITAYH 149
>OSB11_HUMAN (Q9BXB4) Oxysterol-binding protein-related protein 11 (OSBP-related| protein 11) (ORP-11) Length = 747 Score = 28.1 bits (61), Expect = 7.1 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = +1 Query: 31 PILGETYEMVNHQGIT--FIAEQVSHHXPM 114 P+ GE+ V T F+AEQVSHH P+ Sbjct: 486 PLSGESLTQVGSDCYTVRFVAEQVSHHPPV 515 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,042,405 Number of Sequences: 219361 Number of extensions: 216693 Number of successful extensions: 470 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 440 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 444 length of database: 80,573,946 effective HSP length: 18 effective length of database: 76,625,448 effective search space used: 1839010752 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
