ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags24n11 |
|---|---|
| Clone Library Name | barley_pub |
>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 461 Score = 190 bits (482), Expect = 3e-48 Identities = 85/89 (95%), Positives = 87/89 (97%) Frame = +3 Query: 57 GGGKWCVAKDGANGTDLQNNINYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQAN 236 GGGKWCVAKDGANGTDLQNNINYACGFVDCK IQSGGACFSPNSLQ+HASYVMNAYYQAN Sbjct: 373 GGGKWCVAKDGANGTDLQNNINYACGFVDCKPIQSGGACFSPNSLQAHASYVMNAYYQAN 432 Query: 237 GHTDSACDFKGTGVVTSSDPSYGGCKYVS 323 GHTD ACDFKGTG+VTSSDPSYGGCKYVS Sbjct: 433 GHTDLACDFKGTGIVTSSDPSYGGCKYVS 461
>E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 402 Score = 88.2 bits (217), Expect = 2e-17 Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 2/83 (2%) Frame = +3 Query: 69 WCVAKDGANGTDLQNNINYACG--FVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGH 242 +C+A DG + LQ +++ACG +C IQ G +C+ PN+++ HAS+ N+YYQ G Sbjct: 272 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGR 331 Query: 243 TDSACDFKGTGVVTSSDPSYGGC 311 +CDFKG ++T++DPS+G C Sbjct: 332 ASGSCDFKGVAMITTTDPSHGSC 354
>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 505 Score = 83.6 bits (205), Expect = 4e-16 Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 2/89 (2%) Frame = +3 Query: 57 GGGKWCVAKDGANGTDLQNNINYACGF--VDCKAIQSGGACFSPNSLQSHASYVMNAYYQ 230 G +CVAK A+ L + +N+ACG +C AIQ G C+ PN ++SHAS+ N YYQ Sbjct: 358 GSSMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQ 417 Query: 231 ANGHTDSACDFKGTGVVTSSDPSYGGCKY 317 CDF GT + T+ DPSY C Y Sbjct: 418 KMKSAGGTCDFDGTAITTTRDPSYRTCAY 446
>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 501 Score = 82.0 bits (201), Expect = 1e-15 Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 2/85 (2%) Frame = +3 Query: 69 WCVAKDGANGTDLQNNINYACG--FVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANGH 242 +C+AK+ + LQ +++ACG VDC A+ G +C+ P+ + +H++Y NAYYQ G Sbjct: 360 FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGK 419 Query: 243 TDSACDFKGTGVVTSSDPSYGGCKY 317 +CDFKG VT++DPS G C + Sbjct: 420 ASGSCDFKGVATVTTTDPSRGTCVF 444
>E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 484 Score = 75.5 bits (184), Expect = 1e-13 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%) Frame = +3 Query: 66 KWCVAKDGANGTDLQ--NNINYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANG 239 KWC+ AN D Q +++YAC DC ++ G +C + N L + SY N+YYQ + Sbjct: 364 KWCILAPNANLQDPQLGPSVSYACDHADCTSLGYGSSCGNLN-LAQNVSYAFNSYYQVSN 422 Query: 240 HTDSACDFKGTGVVTSSDPSYGGCKY 317 DSAC F G +V++ DPS G CK+ Sbjct: 423 QLDSACKFPGLSIVSTRDPSVGSCKF 448
>EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Anther-specific protein A6) Length = 478 Score = 63.9 bits (154), Expect = 4e-10 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 2/90 (2%) Frame = +3 Query: 60 GGKWCVAKDGANGTDLQNNINYACGFVD--CKAIQSGGACFSPNSLQSHASYVMNAYYQA 233 G WCV +GAN T+L+ + AC + C A+ G C+ P S+ HASY +N+Y+ Sbjct: 386 GQVWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQ 445 Query: 234 NGHTDSACDFKGTGVVTSSDPSYGGCKYVS 323 + C F G T+++P CK+ S Sbjct: 446 FRNQSIQCFFNGLAHETTTNPGNDRCKFPS 475
>E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 477 Score = 63.2 bits (152), Expect = 6e-10 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 2/86 (2%) Frame = +3 Query: 66 KWCVAKDGANGTDLQ--NNINYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANG 239 KWCV K D Q ++YAC DC ++ G +C + + Q+ SY N+YYQ Sbjct: 361 KWCVMKPNVRLDDPQVAPAVSYACSLGDCTSLGVGTSCANLDGKQN-ISYAFNSYYQIQD 419 Query: 240 HTDSACDFKGTGVVTSSDPSYGGCKY 317 D+AC F VT +DPS G C++ Sbjct: 420 QLDTACKFPNISEVTKTDPSTGTCRF 445
>PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regulated protein 1)| Length = 548 Score = 58.9 bits (141), Expect = 1e-08 Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 5/89 (5%) Frame = +3 Query: 72 CVAKDGANGTDLQNNINYACGFVDCKAIQSGGA-----CFSPNSLQSHASYVMNAYYQAN 236 CV D + D + CG++DC AI + G+ S S + SYV+N YY Sbjct: 390 CVVADDVDKEDYGDLFGQVCGYIDCSAISADGSKGEYGVASFCSDKDRLSYVLNQYYLDQ 449 Query: 237 GHTDSACDFKGTGVVTSSDPSYGGCKYVS 323 SACDFKG+ + S + G CK VS Sbjct: 450 DKKSSACDFKGSASINSKASASGSCKAVS 478
>PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regulated protein 2)| Length = 546 Score = 55.5 bits (132), Expect = 1e-07 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%) Frame = +3 Query: 72 CVAKDGANGTDLQNNINYACGFVDCKAIQSGGA-----CFSPNSLQSHASYVMNAYYQAN 236 CV D + D + +Y C +DC I + G +SP + S+VMN YY+ N Sbjct: 380 CVVDDKVDSDDYSDLFSYICAKIDCDGINANGTTGEYGAYSPCHSKDKLSFVMNLYYEQN 439 Query: 237 GHTDSACDFKGTGVVTSSDPSYGGCKYVS 323 + SACDF G+ + S+ + Y+S Sbjct: 440 KESKSACDFGGSASLQSAKTASSCSAYLS 468
>EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudohyphal| development 1) Length = 549 Score = 53.5 bits (127), Expect = 5e-07 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%) Frame = +3 Query: 72 CVAKDGANGTDLQNNINYACGFVDCKAIQSGGA-----CFSPNSLQSHASYVMNAYYQAN 236 CV D + D + +Y C +DC I + +SP + S+V+N YY+ Sbjct: 378 CVVADNVSTDDYSDLFDYVCAKIDCSGINANATTGDYGAYSPCGAKDKLSFVLNLYYEEQ 437 Query: 237 GHTDSACDFKGTGVVTSSDPSYGGCKYVS 323 + SACDF G+ + S+ + Y+S Sbjct: 438 NESKSACDFSGSASLQSASTASSCAAYLS 466
>GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precursor| (Glycoprotein GP115) Length = 559 Score = 48.5 bits (114), Expect = 2e-05 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Frame = +3 Query: 72 CVAKDGANGTDLQNNINYACGFVDCKAIQSGGAC-----FSPNSLQSHASYVMNAYYQAN 236 CV D + D + N+ C VDC I + G +S + + S+VMN YY+ + Sbjct: 379 CVVSDDVDSDDYETLFNWICNEVDCSGISANGTAGKYGAYSFCTPKEQLSFVMNLYYEKS 438 Query: 237 GHTDSACDFKGTGVVTSS 290 G + S C F G+ + ++ Sbjct: 439 GGSKSDCSFSGSATLQTA 456
>EPD2_CANMA (O74137) Protein EPD2 precursor (Essential for pseudohyphal| development 2) Length = 549 Score = 47.4 bits (111), Expect = 3e-05 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 5/85 (5%) Frame = +3 Query: 72 CVAKDGANGTDLQNNINYACGFVDCKAIQSGGAC-----FSPNSLQSHASYVMNAYYQAN 236 CV D + D CG++DC I + G FS S + SYV+N YY Sbjct: 390 CVVADDVDAEDYSTLFGEVCGYIDCGDISANGNTGEYGGFSFCSDKDRLSYVLNQYYHDQ 449 Query: 237 GHTDSACDFKGTGVVTSSDPSYGGC 311 ACDF G+ + + + C Sbjct: 450 NERADACDFAGSASINDNASASTSC 474
>YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor| Length = 542 Score = 46.2 bits (108), Expect = 8e-05 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%) Frame = +3 Query: 72 CVAKDGANGTDLQNNINYACGFVDCKAIQSGG------ACFSPNSLQSHASYVMNAYYQA 233 CV D + D + +Y C + C I + G +S + YV++AYY A Sbjct: 376 CVINDDVSSDDYSDLFSYVCNEISCDGITANGTYPGQYGSYSYCDAKQQLDYVLDAYYSA 435 Query: 234 NGHTDSACDFKGTGVVTSSDPSYGGC 311 G CDF G+ + S+ + G C Sbjct: 436 KGD----CDFSGSATLVSASSATGTC 457
>PSTA_DICDI (P11976) Prestalk protein precursor| Length = 1046 Score = 33.9 bits (76), Expect = 0.39 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 2/82 (2%) Frame = +3 Query: 72 CVAKDGANGTDLQNNINYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANG--HT 245 C G T L + N C C S G C +P ++ H + + Q+ G HT Sbjct: 613 CSNSTGCVHTPLTCDDNNPCTVDSCS--NSTGCCHTPINVDDHNACTEDKCTQSGGVTHT 670 Query: 246 DSACDFKGTGVVTSSDPSYGGC 311 ACD K V S S G C Sbjct: 671 PIACDDKNACTVDSCSNSTGCC 692 Score = 30.0 bits (66), Expect = 5.6 Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 2/82 (2%) Frame = +3 Query: 72 CVAKDGANGTDLQNNINYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQANG--HT 245 C G T L + N C C S G +P ++ H + + Q+ G HT Sbjct: 181 CSNSTGCCHTPLSCDDNNPCTVDSCS--NSTGCVHTPINVDDHNACTEDKCTQSGGVTHT 238 Query: 246 DSACDFKGTGVVTSSDPSYGGC 311 ACD K S S G C Sbjct: 239 PIACDDKNACTADSCSNSTGSC 260 Score = 29.3 bits (64), Expect = 9.6 Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 2/82 (2%) Frame = +3 Query: 72 CVAKDGANGTDLQNNINYACGFVDCKAIQSGGACFSPNSLQSHASYVMNAYYQAN--GHT 245 C G T L + N C C S G C +P ++ H + + Q HT Sbjct: 109 CSNSTGCCHTPLSCDDNNPCTVDSCS--NSTGCCHTPINVVVHNACTEDKCIQLGVVTHT 166 Query: 246 DSACDFKGTGVVTSSDPSYGGC 311 ACD K V S S G C Sbjct: 167 PIACDDKNACTVDSCSNSTGCC 188
>TRPG_CAEEL (Q93971) Transient receptor potential channel (Abnormal gonad| development protein 2) Length = 2032 Score = 30.8 bits (68), Expect = 3.3 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +2 Query: 305 GLQVRLLTVRSKLRQYEGGGASLQPTTISISEPRWRQRRRTAD-TAGLAP 451 GLQ+R + +R G SL P T I + R +RRR+ T G+ P Sbjct: 99 GLQMRTFQPNASIRDENGSMPSLLPRTAPIKKTRKHRRRRSGSFTGGVYP 148
>NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor (Notch 3)| [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2319 Score = 29.6 bits (65), Expect = 7.3 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = -1 Query: 477 LSDTSIEEHGASPAVSAVLRRCRHRGSEMEMVVG*RLAPPPSY----CRSLLRTVRRRTC 310 L + + ++ G P++ + LR C H G+ +++V G R PP Y C + + R TC Sbjct: 1158 LCEINEDDCGPGPSLDSGLR-CLHNGTCVDLVGGFRCNCPPGYTGLHCEADINECRPGTC 1216 Query: 309 N 307 + Sbjct: 1217 H 1217
>DYR1A_RAT (Q63470) Dual specificity tyrosine-phosphorylation-regulated kinase| 1A (EC 2.7.12.2) (Protein kinase minibrain homolog) (MNBH) (RP86) (Dual specificity YAK1-related kinase) Length = 763 Score = 29.6 bits (65), Expect = 7.3 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +1 Query: 301 TGVASTSPDGTQQATAVRGRGRQPSAHYHLHLGAAVAAATE--DC 429 T +++S G T+ GR R H H H G AAA + DC Sbjct: 507 TTSSTSSSSGGSSGTSNSGRARSDPTHQHRHSGGHFAAAVQAMDC 551
>DYR1A_MOUSE (Q61214) Dual specificity tyrosine-phosphorylation-regulated kinase| 1A (EC 2.7.12.1) (Protein kinase minibrain homolog) (MNBH) (MP86) (Dual specificity YAK1-related kinase) Length = 763 Score = 29.6 bits (65), Expect = 7.3 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +1 Query: 301 TGVASTSPDGTQQATAVRGRGRQPSAHYHLHLGAAVAAATE--DC 429 T +++S G T+ GR R H H H G AAA + DC Sbjct: 507 TTSSTSSSSGGSSGTSNSGRARSDPTHQHRHSGGHFAAAVQAMDC 551 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,536,092 Number of Sequences: 219361 Number of extensions: 1231679 Number of successful extensions: 3202 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3085 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3186 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
