ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags25c01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507356.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA Length = 1487 Score = 557 bits (281), Expect = e-155 Identities = 510/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| |||||||||| |||||||||| |||| |||||| | |||||||| || Sbjct: 483 cgcccgcggccaccgcatcgagaccgtccccgagctccccctcgtcatttccgactccgc 542 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||||||||||||||||||| | || ||||| | ||||||| ||| Sbjct: 543 cgagtccatcgagaagacctcccaggccatcaagatcctgaagcaggtcggcgcctacgc 602 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 603 cgacgccgagaaggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaa 662 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 663 ccgccgctacatcaaccgcaagggccccctcatcgtctacggcaccgagggatccaagat 722 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 723 cgtcaaggccttccgcaacctccccggcgtggatgtcgccaacgtcgagcgcctcaacct 782 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||| || || ||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 783 gctcgacctcgcacccggtggtcacctcgggcgcttcgtgatctggaccgagagcgcctt 842 Query: 371 caagaagctggacgaggtgtacggctcctttgaggcgtcttcctccaagaagaagggctt 430 ||||||||| || |||||||| ||| |||| |||||| | || ||||||||||| || Sbjct: 843 caagaagcttgaggaggtgtatggcaccttcgaggcgccgtcgctgaagaagaaggggtt 902 Query: 431 cgtcctccccaggcctaagatgaccaacgctgaccttggccgcctcatcaactctgacga 490 | |||| || ||||| |||||| |||| ||||| |||||| | ||||||||||||| || Sbjct: 903 catcctgccgaggcccaagatggccaatgctgatcttggcaggatcatcaactctgatga 962 Query: 491 ggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagggaggccaggaagaa 550 ||| |||||||| |||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 963 ggtgcagtctgtggtgaagccgctcaacaaggaggtcaagcgcagggagaagaggaagaa 1022 Query: 551 ccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||| || ||||||| || || ||||||||||||||||||||||| Sbjct: 1023 cccgctcaagaatgtcgccgctgtgctcaagctcaacccctactt 1067
>ref|XM_476865.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1395 Score = 557 bits (281), Expect = e-155 Identities = 510/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| |||||||||| |||||||||| |||| |||||| | |||||||| || Sbjct: 487 cgcccgcggccaccgcatcgagaccgtccccgagctccccctcgtcatttccgactccgc 546 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||||||||||||||||||| | || ||||| | ||||||| ||| Sbjct: 547 cgagtccatcgagaagacctcccaggccatcaagatcctgaagcaggtcggcgcctacgc 606 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 607 cgacgccgagaaggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaa 666 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 667 ccgccgctacatcaaccgcaagggccccctcatcgtctacggcaccgagggatccaagat 726 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 727 cgtcaaggccttccgcaacctccccggcgtggatgtcgccaacgtcgagcgcctcaacct 786 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||| || || ||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 787 gctcgacctcgcacccggtggtcacctcgggcgcttcgtgatctggaccgagagcgcctt 846 Query: 371 caagaagctggacgaggtgtacggctcctttgaggcgtcttcctccaagaagaagggctt 430 ||||||||| || |||||||| ||| |||| |||||| | || ||||||||||| || Sbjct: 847 caagaagcttgaggaggtgtatggcaccttcgaggcgccgtcgctgaagaagaaggggtt 906 Query: 431 cgtcctccccaggcctaagatgaccaacgctgaccttggccgcctcatcaactctgacga 490 | |||| || ||||| |||||| |||| ||||| |||||| | ||||||||||||| || Sbjct: 907 catcctgccgaggcccaagatggccaatgctgatcttggcaggatcatcaactctgatga 966 Query: 491 ggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagggaggccaggaagaa 550 ||| |||||||| |||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 967 ggtgcagtctgtggtgaagccgctcaacaaggaggtcaagcgcagggagaagaggaagaa 1026 Query: 551 ccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||| || ||||||| || || ||||||||||||||||||||||| Sbjct: 1027 cccgctcaagaatgtcgccgctgtgctcaagctcaacccctactt 1071
>ref|XM_507355.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA Length = 1641 Score = 557 bits (281), Expect = e-155 Identities = 510/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| |||||||||| |||||||||| |||| |||||| | |||||||| || Sbjct: 487 cgcccgcggccaccgcatcgagaccgtccccgagctccccctcgtcatttccgactccgc 546 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||||||||||||||||||| | || ||||| | ||||||| ||| Sbjct: 547 cgagtccatcgagaagacctcccaggccatcaagatcctgaagcaggtcggcgcctacgc 606 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 607 cgacgccgagaaggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaa 666 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 667 ccgccgctacatcaaccgcaagggccccctcatcgtctacggcaccgagggatccaagat 726 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 727 cgtcaaggccttccgcaacctccccggcgtggatgtcgccaacgtcgagcgcctcaacct 786 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||| || || ||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 787 gctcgacctcgcacccggtggtcacctcgggcgcttcgtgatctggaccgagagcgcctt 846 Query: 371 caagaagctggacgaggtgtacggctcctttgaggcgtcttcctccaagaagaagggctt 430 ||||||||| || |||||||| ||| |||| |||||| | || ||||||||||| || Sbjct: 847 caagaagcttgaggaggtgtatggcaccttcgaggcgccgtcgctgaagaagaaggggtt 906 Query: 431 cgtcctccccaggcctaagatgaccaacgctgaccttggccgcctcatcaactctgacga 490 | |||| || ||||| |||||| |||| ||||| |||||| | ||||||||||||| || Sbjct: 907 catcctgccgaggcccaagatggccaatgctgatcttggcaggatcatcaactctgatga 966 Query: 491 ggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagggaggccaggaagaa 550 ||| |||||||| |||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 967 ggtgcagtctgtggtgaagccgctcaacaaggaggtcaagcgcagggagaagaggaagaa 1026 Query: 551 ccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||| || ||||||| || || ||||||||||||||||||||||| Sbjct: 1027 cccgctcaagaatgtcgccgctgtgctcaagctcaacccctactt 1071
>ref|XM_507354.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA Length = 1480 Score = 557 bits (281), Expect = e-155 Identities = 510/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| |||||||||| |||||||||| |||| |||||| | |||||||| || Sbjct: 488 cgcccgcggccaccgcatcgagaccgtccccgagctccccctcgtcatttccgactccgc 547 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||||||||||||||||||| | || ||||| | ||||||| ||| Sbjct: 548 cgagtccatcgagaagacctcccaggccatcaagatcctgaagcaggtcggcgcctacgc 607 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 608 cgacgccgagaaggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaa 667 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 668 ccgccgctacatcaaccgcaagggccccctcatcgtctacggcaccgagggatccaagat 727 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 728 cgtcaaggccttccgcaacctccccggcgtggatgtcgccaacgtcgagcgcctcaacct 787 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||| || || ||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 788 gctcgacctcgcacccggtggtcacctcgggcgcttcgtgatctggaccgagagcgcctt 847 Query: 371 caagaagctggacgaggtgtacggctcctttgaggcgtcttcctccaagaagaagggctt 430 ||||||||| || |||||||| ||| |||| |||||| | || ||||||||||| || Sbjct: 848 caagaagcttgaggaggtgtatggcaccttcgaggcgccgtcgctgaagaagaaggggtt 907 Query: 431 cgtcctccccaggcctaagatgaccaacgctgaccttggccgcctcatcaactctgacga 490 | |||| || ||||| |||||| |||| ||||| |||||| | ||||||||||||| || Sbjct: 908 catcctgccgaggcccaagatggccaatgctgatcttggcaggatcatcaactctgatga 967 Query: 491 ggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagggaggccaggaagaa 550 ||| |||||||| |||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 968 ggtgcagtctgtggtgaagccgctcaacaaggaggtcaagcgcagggagaagaggaagaa 1027 Query: 551 ccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||| || ||||||| || || ||||||||||||||||||||||| Sbjct: 1028 cccgctcaagaatgtcgccgctgtgctcaagctcaacccctactt 1072
>ref|XM_506197.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA Length = 1486 Score = 557 bits (281), Expect = e-155 Identities = 510/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| |||||||||| |||||||||| |||| |||||| | |||||||| || Sbjct: 488 cgcccgcggccaccgcatcgagaccgtccccgagctccccctcgtcatttccgactccgc 547 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||||||||||||||||||| | || ||||| | ||||||| ||| Sbjct: 548 cgagtccatcgagaagacctcccaggccatcaagatcctgaagcaggtcggcgcctacgc 607 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 608 cgacgccgagaaggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaa 667 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 668 ccgccgctacatcaaccgcaagggccccctcatcgtctacggcaccgagggatccaagat 727 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 728 cgtcaaggccttccgcaacctccccggcgtggatgtcgccaacgtcgagcgcctcaacct 787 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||| || || ||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 788 gctcgacctcgcacccggtggtcacctcgggcgcttcgtgatctggaccgagagcgcctt 847 Query: 371 caagaagctggacgaggtgtacggctcctttgaggcgtcttcctccaagaagaagggctt 430 ||||||||| || |||||||| ||| |||| |||||| | || ||||||||||| || Sbjct: 848 caagaagcttgaggaggtgtatggcaccttcgaggcgccgtcgctgaagaagaaggggtt 907 Query: 431 cgtcctccccaggcctaagatgaccaacgctgaccttggccgcctcatcaactctgacga 490 | |||| || ||||| |||||| |||| ||||| |||||| | ||||||||||||| || Sbjct: 908 catcctgccgaggcccaagatggccaatgctgatcttggcaggatcatcaactctgatga 967 Query: 491 ggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagggaggccaggaagaa 550 ||| |||||||| |||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 968 ggtgcagtctgtggtgaagccgctcaacaaggaggtcaagcgcagggagaagaggaagaa 1027 Query: 551 ccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||| || ||||||| || || ||||||||||||||||||||||| Sbjct: 1028 cccgctcaagaatgtcgccgctgtgctcaagctcaacccctactt 1072
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 557 bits (281), Expect = e-155 Identities = 510/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| |||||||||| |||||||||| |||| |||||| | |||||||| || Sbjct: 4295811 cgcccgcggccaccgcatcgagaccgtccccgagctccccctcgtcatttccgactccgc 4295870 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||||||||||||||||||| | || ||||| | ||||||| ||| Sbjct: 4295871 cgagtccatcgagaagacctcccaggccatcaagatcctgaagcaggtcggcgcctacgc 4295930 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 4295931 cgacgccgagaaggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaa 4295990 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 4295991 ccgccgctacatcaaccgcaagggccccctcatcgtctacggcaccgagggatccaagat 4296050 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 4296051 cgtcaaggccttccgcaacctccccggcgtggatgtcgccaacgtcgagcgcctcaacct 4296110 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||| || || ||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 4296111 gctcgacctcgcacccggtggtcacctcgggcgcttcgtgatctggaccgagagcgcctt 4296170 Query: 371 caagaagctggacgaggtgtacggctcctttgaggcgtcttcctccaagaagaagggctt 430 ||||||||| || |||||||| ||| |||| |||||| | || ||||||||||| || Sbjct: 4296171 caagaagcttgaggaggtgtatggcaccttcgaggcgccgtcgctgaagaagaaggggtt 4296230 Query: 431 cgtcctccccaggcctaagatgaccaacgctgaccttggccgcctcatcaactctgacga 490 | |||| || ||||| |||||| |||| ||||| |||||| | ||||||||||||| || Sbjct: 4296231 catcctgccgaggcccaagatggccaatgctgatcttggcaggatcatcaactctgatga 4296290 Query: 491 ggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagggaggccaggaagaa 550 ||| |||||||| |||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 4296291 ggtgcagtctgtggtgaagccgctcaacaaggaggtcaagcgcagggagaagaggaagaa 4296350 Query: 551 ccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||| || ||||||| || || ||||||||||||||||||||||| Sbjct: 4296351 cccgctcaagaatgtcgccgctgtgctcaagctcaacccctactt 4296395
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 557 bits (281), Expect = e-155 Identities = 510/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| |||||||||| |||||||||| |||| |||||| | |||||||| || Sbjct: 116865 cgcccgcggccaccgcatcgagaccgtccccgagctccccctcgtcatttccgactccgc 116924 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||||||||||||||||||| | || ||||| | ||||||| ||| Sbjct: 116925 cgagtccatcgagaagacctcccaggccatcaagatcctgaagcaggtcggcgcctacgc 116984 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 116985 cgacgccgagaaggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaa 117044 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 117045 ccgccgctacatcaaccgcaagggccccctcatcgtctacggcaccgagggatccaagat 117104 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 117105 cgtcaaggccttccgcaacctccccggcgtggatgtcgccaacgtcgagcgcctcaacct 117164 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||| || || ||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 117165 gctcgacctcgcacccggtggtcacctcgggcgcttcgtgatctggaccgagagcgcctt 117224 Query: 371 caagaagctggacgaggtgtacggctcctttgaggcgtcttcctccaagaagaagggctt 430 ||||||||| || |||||||| ||| |||| |||||| | || ||||||||||| || Sbjct: 117225 caagaagcttgaggaggtgtatggcaccttcgaggcgccgtcgctgaagaagaaggggtt 117284 Query: 431 cgtcctccccaggcctaagatgaccaacgctgaccttggccgcctcatcaactctgacga 490 | |||| || ||||| |||||| |||| ||||| |||||| | ||||||||||||| || Sbjct: 117285 catcctgccgaggcccaagatggccaatgctgatcttggcaggatcatcaactctgatga 117344 Query: 491 ggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagggaggccaggaagaa 550 ||| |||||||| |||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 117345 ggtgcagtctgtggtgaagccgctcaacaaggaggtcaagcgcagggagaagaggaagaa 117404 Query: 551 ccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||| || ||||||| || || ||||||||||||||||||||||| Sbjct: 117405 cccgctcaagaatgtcgccgctgtgctcaagctcaacccctactt 117449
>dbj|AK104504.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F06, full insert sequence Length = 1486 Score = 557 bits (281), Expect = e-155 Identities = 510/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| |||||||||| |||||||||| |||| |||||| | |||||||| || Sbjct: 488 cgcccgcggccaccgcatcgagaccgtccccgagctccccctcgtcatttccgactccgc 547 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||||||||||||||||||| | || ||||| | ||||||| ||| Sbjct: 548 cgagtccatcgagaagacctcccaggccatcaagatcctgaagcaggtcggcgcctacgc 607 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 608 cgacgccgagaaggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaa 667 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 668 ccgccgctacatcaaccgcaagggccccctcatcgtctacggcaccgagggatccaagat 727 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 728 cgtcaaggccttccgcaacctccccggcgtggatgtcgccaacgtcgagcgcctcaacct 787 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||| || || ||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 788 gctcgacctcgcacccggtggtcacctcgggcgcttcgtgatctggaccgagagcgcctt 847 Query: 371 caagaagctggacgaggtgtacggctcctttgaggcgtcttcctccaagaagaagggctt 430 ||||||||| || |||||||| ||| |||| |||||| | || ||||||||||| || Sbjct: 848 caagaagcttgaggaggtgtatggcaccttcgaggcgccgtcgctgaagaagaaggggtt 907 Query: 431 cgtcctccccaggcctaagatgaccaacgctgaccttggccgcctcatcaactctgacga 490 | |||| || ||||| |||||| |||| ||||| |||||| | ||||||||||||| || Sbjct: 908 catcctgccgaggcccaagatggccaatgctgatcttggcaggatcatcaactctgatga 967 Query: 491 ggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagggaggccaggaagaa 550 ||| |||||||| |||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 968 ggtgcagtctgtggtgaagccgctcaacaaggaggtcaagcgcagggagaagaggaagaa 1027 Query: 551 ccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||| || ||||||| || || ||||||||||||||||||||||| Sbjct: 1028 cccgctcaagaatgtcgccgctgtgctcaagctcaacccctactt 1072
>dbj|AK104629.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C02, full insert sequence Length = 1487 Score = 557 bits (281), Expect = e-155 Identities = 510/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| |||||||||| |||||||||| |||| |||||| | |||||||| || Sbjct: 483 cgcccgcggccaccgcatcgagaccgtccccgagctccccctcgtcatttccgactccgc 542 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||||||||||||||||||| | || ||||| | ||||||| ||| Sbjct: 543 cgagtccatcgagaagacctcccaggccatcaagatcctgaagcaggtcggcgcctacgc 602 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 603 cgacgccgagaaggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaa 662 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 663 ccgccgctacatcaaccgcaagggccccctcatcgtctacggcaccgagggatccaagat 722 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 723 cgtcaaggccttccgcaacctccccggcgtggatgtcgccaacgtcgagcgcctcaacct 782 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||| || || ||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 783 gctcgacctcgcacccggtggtcacctcgggcgcttcgtgatctggaccgagagcgcctt 842 Query: 371 caagaagctggacgaggtgtacggctcctttgaggcgtcttcctccaagaagaagggctt 430 ||||||||| || |||||||| ||| |||| |||||| | || ||||||||||| || Sbjct: 843 caagaagcttgaggaggtgtatggcaccttcgaggcgccgtcgctgaagaagaaggggtt 902 Query: 431 cgtcctccccaggcctaagatgaccaacgctgaccttggccgcctcatcaactctgacga 490 | |||| || ||||| |||||| |||| ||||| |||||| | ||||||||||||| || Sbjct: 903 catcctgccgaggcccaagatggccaatgctgatcttggcaggatcatcaactctgatga 962 Query: 491 ggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagggaggccaggaagaa 550 ||| |||||||| |||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 963 ggtgcagtctgtggtgaagccgctcaacaaggaggtcaagcgcagggagaagaggaagaa 1022 Query: 551 ccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||| || ||||||| || || ||||||||||||||||||||||| Sbjct: 1023 cccgctcaagaatgtcgccgctgtgctcaagctcaacccctactt 1067
>dbj|AK104447.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B12, full insert sequence Length = 1480 Score = 557 bits (281), Expect = e-155 Identities = 510/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| |||||||||| |||||||||| |||| |||||| | |||||||| || Sbjct: 488 cgcccgcggccaccgcatcgagaccgtccccgagctccccctcgtcatttccgactccgc 547 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||||||||||||||||||| | || ||||| | ||||||| ||| Sbjct: 548 cgagtccatcgagaagacctcccaggccatcaagatcctgaagcaggtcggcgcctacgc 607 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 608 cgacgccgagaaggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaa 667 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 668 ccgccgctacatcaaccgcaagggccccctcatcgtctacggcaccgagggatccaagat 727 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 728 cgtcaaggccttccgcaacctccccggcgtggatgtcgccaacgtcgagcgcctcaacct 787 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||| || || ||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 788 gctcgacctcgcacccggtggtcacctcgggcgcttcgtgatctggaccgagagcgcctt 847 Query: 371 caagaagctggacgaggtgtacggctcctttgaggcgtcttcctccaagaagaagggctt 430 ||||||||| || |||||||| ||| |||| |||||| | || ||||||||||| || Sbjct: 848 caagaagcttgaggaggtgtatggcaccttcgaggcgccgtcgctgaagaagaaggggtt 907 Query: 431 cgtcctccccaggcctaagatgaccaacgctgaccttggccgcctcatcaactctgacga 490 | |||| || ||||| |||||| |||| ||||| |||||| | ||||||||||||| || Sbjct: 908 catcctgccgaggcccaagatggccaatgctgatcttggcaggatcatcaactctgatga 967 Query: 491 ggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagggaggccaggaagaa 550 ||| |||||||| |||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 968 ggtgcagtctgtggtgaagccgctcaacaaggaggtcaagcgcagggagaagaggaagaa 1027 Query: 551 ccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||| || ||||||| || || ||||||||||||||||||||||| Sbjct: 1028 cccgctcaagaatgtcgccgctgtgctcaagctcaacccctactt 1072
>dbj|AK060963.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-A09, full insert sequence Length = 1395 Score = 557 bits (281), Expect = e-155 Identities = 510/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| |||||||||| |||||||||| |||| |||||| | |||||||| || Sbjct: 487 cgcccgcggccaccgcatcgagaccgtccccgagctccccctcgtcatttccgactccgc 546 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||||||||||||||||||| | || ||||| | ||||||| ||| Sbjct: 547 cgagtccatcgagaagacctcccaggccatcaagatcctgaagcaggtcggcgcctacgc 606 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 607 cgacgccgagaaggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaa 666 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 667 ccgccgctacatcaaccgcaagggccccctcatcgtctacggcaccgagggatccaagat 726 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 727 cgtcaaggccttccgcaacctccccggcgtggatgtcgccaacgtcgagcgcctcaacct 786 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||| || || ||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 787 gctcgacctcgcacccggtggtcacctcgggcgcttcgtgatctggaccgagagcgcctt 846 Query: 371 caagaagctggacgaggtgtacggctcctttgaggcgtcttcctccaagaagaagggctt 430 ||||||||| || |||||||| ||| |||| |||||| | || ||||||||||| || Sbjct: 847 caagaagcttgaggaggtgtatggcaccttcgaggcgccgtcgctgaagaagaaggggtt 906 Query: 431 cgtcctccccaggcctaagatgaccaacgctgaccttggccgcctcatcaactctgacga 490 | |||| || ||||| |||||| |||| ||||| |||||| | ||||||||||||| || Sbjct: 907 catcctgccgaggcccaagatggccaatgctgatcttggcaggatcatcaactctgatga 966 Query: 491 ggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagggaggccaggaagaa 550 ||| |||||||| |||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 967 ggtgcagtctgtggtgaagccgctcaacaaggaggtcaagcgcagggagaagaggaagaa 1026 Query: 551 ccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||| || ||||||| || || ||||||||||||||||||||||| Sbjct: 1027 cccgctcaagaatgtcgccgctgtgctcaagctcaacccctactt 1071
>dbj|AK060711.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B02, full insert sequence Length = 1641 Score = 557 bits (281), Expect = e-155 Identities = 510/585 (87%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| |||||||||| |||||||||| |||| |||||| | |||||||| || Sbjct: 487 cgcccgcggccaccgcatcgagaccgtccccgagctccccctcgtcatttccgactccgc 546 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||||||||||||||||||| | || ||||| | ||||||| ||| Sbjct: 547 cgagtccatcgagaagacctcccaggccatcaagatcctgaagcaggtcggcgcctacgc 606 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 607 cgacgccgagaaggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaa 666 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| | ||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 667 ccgccgctacatcaaccgcaagggccccctcatcgtctacggcaccgagggatccaagat 726 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 727 cgtcaaggccttccgcaacctccccggcgtggatgtcgccaacgtcgagcgcctcaacct 786 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||| || || ||||| ||||| || || || ||||||||||||||| ||||| Sbjct: 787 gctcgacctcgcacccggtggtcacctcgggcgcttcgtgatctggaccgagagcgcctt 846 Query: 371 caagaagctggacgaggtgtacggctcctttgaggcgtcttcctccaagaagaagggctt 430 ||||||||| || |||||||| ||| |||| |||||| | || ||||||||||| || Sbjct: 847 caagaagcttgaggaggtgtatggcaccttcgaggcgccgtcgctgaagaagaaggggtt 906 Query: 431 cgtcctccccaggcctaagatgaccaacgctgaccttggccgcctcatcaactctgacga 490 | |||| || ||||| |||||| |||| ||||| |||||| | ||||||||||||| || Sbjct: 907 catcctgccgaggcccaagatggccaatgctgatcttggcaggatcatcaactctgatga 966 Query: 491 ggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagggaggccaggaagaa 550 ||| |||||||| |||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 967 ggtgcagtctgtggtgaagccgctcaacaaggaggtcaagcgcagggagaagaggaagaa 1026 Query: 551 ccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||| || ||||||| || || ||||||||||||||||||||||| Sbjct: 1027 cccgctcaagaatgtcgccgctgtgctcaagctcaacccctactt 1071
>gb|BT016602.1| Zea mays clone Contig435 mRNA sequence Length = 1376 Score = 442 bits (223), Expect = e-121 Identities = 484/571 (84%) Strand = Plus / Plus Query: 23 ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggccgagggcatcga 82 |||||||||| |||||| ||| | || || ||| ||||||||||||| ||| |||||| Sbjct: 473 ccgcatcgagaccgtcccagagatgcccctggtcatctccgactcggcggagtccatcga 532 Query: 83 gaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgctgacgccgagaa 142 ||||||||||||||| | ||| | ||| ||||| | ||||||| ||| ||||||||||| Sbjct: 533 gaagacctcccaggcgctaaagatcctcaagcaggtcggcgcctacgccgacgccgagaa 592 Query: 143 ggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaaccgcaggtacat 202 ||||||||| || ||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 593 ggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaaccgccgctacat 652 Query: 203 caaccgcaagggacccctcatcgtctacggcaccgagggctccaagatcgtcaaggcctt 262 ||||||||||| || ||| ||||||||||||| || ||||||||| ||||||||||||| Sbjct: 653 taaccgcaagggcccgctcgtcgtctacggcacagaaggctccaaggtcgtcaaggcctt 712 Query: 263 ccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgc 322 |||||||||||| || ||||| || |||||||||||||||||||||||||||||||| || Sbjct: 713 ccgcaacctccccggcgtggacgtcgccaacgtcgagcgcctcaacctgctcgacctcgc 772 Query: 323 ccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaagctgga 382 ||| ||||||||||| || || |||||||||||||||||| || ||||||||||| || Sbjct: 773 ccccggtggccacctcgggcgctttgtgatctggaccgagagcgcgttcaagaagctcga 832 Query: 383 cgaggtgtacggctcctttgaggcgtcttcctccaagaagaagggcttcgtcctccccag 442 |||||||| || |||||| ||| | || |||||||||||||| || || || || Sbjct: 833 ggaggtgtatgggagctttgacgcgccgtcgcagaagaagaagggctttgttctgccgag 892 Query: 443 gcctaagatgaccaacgctgaccttggccgcctcatcaactctgacgaggtccagtctgt 502 ||| |||||| ||||||||||||| ||| | | ||||||||||||||||| |||||||| Sbjct: 893 gcccaagatggccaacgctgacctgggcaggattatcaactctgacgaggtgcagtctgt 952 Query: 503 tgtgaagcccatcaacaaggaggttaagcgcagggaggccaggaagaaccctctgaagaa 562 || ||||| ||||||||||||| |||||||||||| ||||||||||| || | ||| Sbjct: 953 ggttaagccactcaacaaggaggtgaagcgcagggagaagaggaagaacccgctcacgaa 1012 Query: 563 tgctgctgccgtgctcaagctcaacccctac 593 ||||| ||||||||||| ||||||||| Sbjct: 1013 catggctgctgtgctcaagctgaacccctac 1043
>ref|NM_185075.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1464 Score = 406 bits (205), Expect = e-110 Identities = 338/381 (88%), Gaps = 1/381 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 475 cgcccgcggccaccgcatcgagggcgtccccgagttcccgctcgtcgtctcggactccat 534 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||| | ||| |||||||||| ||| ||||| | || |||| ||| Sbjct: 535 cgagtccatcgagaagactgcgcagtccatcaaggtcctcaagcagattggtgcctacgc 594 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 ||| ||||||||| ||||||| || || | ||||||| | |||||||| ||||||||||| Sbjct: 595 tgatgccgagaagaccaaggattcggtggccatccgcgctggcaaggggaagatgcgcaa 654 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| |||||||||| |||||||| |||||||||||||||||||||||||| |||||| | Sbjct: 655 ccgccggtacatcaatcgcaagggccccctcatcgtctacggcaccgagggttccaaggt 714 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 ||||||||| |||||||||||||| || || ||||||||||| || |||||||||||||| Sbjct: 715 cgtcaaggctttccgcaacctccccggcgttgatgttgccaatgtggagcgcctcaacct 774 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||||||||||||||||||||||||||| || |||||||||||||||| || || Sbjct: 775 gctcgaccttgcccctggtggccaccttggccgcttcgtgatctggaccgagtgcgcgtt 834 Query: 371 caagaagctggacgaggtgta 391 ||||||||| ||||||||||| Sbjct: 835 caagaagctcgacgaggtgta 855 Score = 141 bits (71), Expect = 3e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 417 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 476 ||||||||||||||||| ||||| ||||| |||||| | || || ||||| | | || Sbjct: 881 aagaagaagggcttcgtgctcccgaggccgaagatggcgaatgccgacctgtccaggctg 940 Query: 477 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 536 |||||||| || ||||||||||| || ||||||||||||||||||||||| |||| |||| Sbjct: 941 atcaactccgatgaggtccagtcggtggtgaagcccatcaacaaggaggtgaagctcagg 1000 Query: 537 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||||| || | ||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 1001 gaggcgagaaggaaccctctgaagaatgtggccgctgtgctcaagctgaacccctactt 1059
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 406 bits (205), Expect = e-110 Identities = 338/381 (88%), Gaps = 1/381 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 37899 cgcccgcggccaccgcatcgagggcgtccccgagttcccgctcgtcgtctcggactccat 37958 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||| | ||| |||||||||| ||| ||||| | || |||| ||| Sbjct: 37959 cgagtccatcgagaagactgcgcagtccatcaaggtcctcaagcagattggtgcctacgc 38018 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 ||| ||||||||| ||||||| || || | ||||||| | |||||||| ||||||||||| Sbjct: 38019 tgatgccgagaagaccaaggattcggtggccatccgcgctggcaaggggaagatgcgcaa 38078 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| |||||||||| |||||||| |||||||||||||||||||||||||| |||||| | Sbjct: 38079 ccgccggtacatcaatcgcaagggccccctcatcgtctacggcaccgagggttccaaggt 38138 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 ||||||||| |||||||||||||| || || ||||||||||| || |||||||||||||| Sbjct: 38139 cgtcaaggctttccgcaacctccccggcgttgatgttgccaatgtggagcgcctcaacct 38198 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||||||||||||||||||||||||||| || |||||||||||||||| || || Sbjct: 38199 gctcgaccttgcccctggtggccaccttggccgcttcgtgatctggaccgagtgcgcgtt 38258 Query: 371 caagaagctggacgaggtgta 391 ||||||||| ||||||||||| Sbjct: 38259 caagaagctcgacgaggtgta 38279 Score = 141 bits (71), Expect = 3e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 417 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 476 ||||||||||||||||| ||||| ||||| |||||| | || || ||||| | | || Sbjct: 38305 aagaagaagggcttcgtgctcccgaggccgaagatggcgaatgccgacctgtccaggctg 38364 Query: 477 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 536 |||||||| || ||||||||||| || ||||||||||||||||||||||| |||| |||| Sbjct: 38365 atcaactccgatgaggtccagtcggtggtgaagcccatcaacaaggaggtgaagctcagg 38424 Query: 537 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||||| || | ||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 38425 gaggcgagaaggaaccctctgaagaatgtggccgctgtgctcaagctgaacccctactt 38483
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 406 bits (205), Expect = e-110 Identities = 338/381 (88%), Gaps = 1/381 (0%) Strand = Plus / Minus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 32841642 cgcccgcggccaccgcatcgagggcgtccccgagttcccgctcgtcgtctcggactccat 32841583 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||| | ||| |||||||||| ||| ||||| | || |||| ||| Sbjct: 32841582 cgagtccatcgagaagactgcgcagtccatcaaggtcctcaagcagattggtgcctacgc 32841523 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 ||| ||||||||| ||||||| || || | ||||||| | |||||||| ||||||||||| Sbjct: 32841522 tgatgccgagaagaccaaggattcggtggccatccgcgctggcaaggggaagatgcgcaa 32841463 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| |||||||||| |||||||| |||||||||||||||||||||||||| |||||| | Sbjct: 32841462 ccgccggtacatcaatcgcaagggccccctcatcgtctacggcaccgagggttccaaggt 32841403 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 ||||||||| |||||||||||||| || || ||||||||||| || |||||||||||||| Sbjct: 32841402 cgtcaaggctttccgcaacctccccggcgttgatgttgccaatgtggagcgcctcaacct 32841343 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||||||||||||||||||||||||||| || |||||||||||||||| || || Sbjct: 32841342 gctcgaccttgcccctggtggccaccttggccgcttcgtgatctggaccgagtgcgcgtt 32841283 Query: 371 caagaagctggacgaggtgta 391 ||||||||| ||||||||||| Sbjct: 32841282 caagaagctcgacgaggtgta 32841262 Score = 141 bits (71), Expect = 3e-30 Identities = 152/179 (84%) Strand = Plus / Minus Query: 417 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 476 ||||||||||||||||| ||||| ||||| |||||| | || || ||||| | | || Sbjct: 32841236 aagaagaagggcttcgtgctcccgaggccgaagatggcgaatgccgacctgtccaggctg 32841177 Query: 477 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 536 |||||||| || ||||||||||| || ||||||||||||||||||||||| |||| |||| Sbjct: 32841176 atcaactccgatgaggtccagtcggtggtgaagcccatcaacaaggaggtgaagctcagg 32841117 Query: 537 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||||| || | ||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 32841116 gaggcgagaaggaaccctctgaagaatgtggccgctgtgctcaagctgaacccctactt 32841058
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 406 bits (205), Expect = e-110 Identities = 338/381 (88%), Gaps = 1/381 (0%) Strand = Plus / Plus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 148533 cgcccgcggccaccgcatcgagggcgtccccgagttcccgctcgtcgtctcggactccat 148592 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||| | ||| |||||||||| ||| ||||| | || |||| ||| Sbjct: 148593 cgagtccatcgagaagactgcgcagtccatcaaggtcctcaagcagattggtgcctacgc 148652 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 ||| ||||||||| ||||||| || || | ||||||| | |||||||| ||||||||||| Sbjct: 148653 tgatgccgagaagaccaaggattcggtggccatccgcgctggcaaggggaagatgcgcaa 148712 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| |||||||||| |||||||| |||||||||||||||||||||||||| |||||| | Sbjct: 148713 ccgccggtacatcaatcgcaagggccccctcatcgtctacggcaccgagggttccaaggt 148772 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 ||||||||| |||||||||||||| || || ||||||||||| || |||||||||||||| Sbjct: 148773 cgtcaaggctttccgcaacctccccggcgttgatgttgccaatgtggagcgcctcaacct 148832 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||||||||||||||||||||||||||| || |||||||||||||||| || || Sbjct: 148833 gctcgaccttgcccctggtggccaccttggccgcttcgtgatctggaccgagtgcgcgtt 148892 Query: 371 caagaagctggacgaggtgta 391 ||||||||| ||||||||||| Sbjct: 148893 caagaagctcgacgaggtgta 148913 Score = 141 bits (71), Expect = 3e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 417 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 476 ||||||||||||||||| ||||| ||||| |||||| | || || ||||| | | || Sbjct: 148939 aagaagaagggcttcgtgctcccgaggccgaagatggcgaatgccgacctgtccaggctg 148998 Query: 477 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 536 |||||||| || ||||||||||| || ||||||||||||||||||||||| |||| |||| Sbjct: 148999 atcaactccgatgaggtccagtcggtggtgaagcccatcaacaaggaggtgaagctcagg 149058 Query: 537 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||||| || | ||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 149059 gaggcgagaaggaaccctctgaagaatgtggccgctgtgctcaagctgaacccctactt 149117
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 406 bits (205), Expect = e-110 Identities = 338/381 (88%), Gaps = 1/381 (0%) Strand = Plus / Minus Query: 12 cgcccgcggcc-ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggc 70 ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 32932152 cgcccgcggccaccgcatcgagggcgtccccgagttcccgctcgtcgtctcggactccat 32932093 Query: 71 cgagggcatcgagaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgc 130 |||| |||||||||||| | ||| |||||||||| ||| ||||| | || |||| ||| Sbjct: 32932092 cgagtccatcgagaagactgcgcagtccatcaaggtcctcaagcagattggtgcctacgc 32932033 Query: 131 tgacgccgagaaggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaa 190 ||| ||||||||| ||||||| || || | ||||||| | |||||||| ||||||||||| Sbjct: 32932032 tgatgccgagaagaccaaggattcggtggccatccgcgctggcaaggggaagatgcgcaa 32931973 Query: 191 ccgcaggtacatcaaccgcaagggacccctcatcgtctacggcaccgagggctccaagat 250 |||| |||||||||| |||||||| |||||||||||||||||||||||||| |||||| | Sbjct: 32931972 ccgccggtacatcaatcgcaagggccccctcatcgtctacggcaccgagggttccaaggt 32931913 Query: 251 cgtcaaggccttccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacct 310 ||||||||| |||||||||||||| || || ||||||||||| || |||||||||||||| Sbjct: 32931912 cgtcaaggctttccgcaacctccccggcgttgatgttgccaatgtggagcgcctcaacct 32931853 Query: 311 gctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgcctt 370 ||||||||||||||||||||||||||||||||| || |||||||||||||||| || || Sbjct: 32931852 gctcgaccttgcccctggtggccaccttggccgcttcgtgatctggaccgagtgcgcgtt 32931793 Query: 371 caagaagctggacgaggtgta 391 ||||||||| ||||||||||| Sbjct: 32931792 caagaagctcgacgaggtgta 32931772 Score = 141 bits (71), Expect = 3e-30 Identities = 152/179 (84%) Strand = Plus / Minus Query: 417 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 476 ||||||||||||||||| ||||| ||||| |||||| | || || ||||| | | || Sbjct: 32931746 aagaagaagggcttcgtgctcccgaggccgaagatggcgaatgccgacctgtccaggctg 32931687 Query: 477 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 536 |||||||| || ||||||||||| || ||||||||||||||||||||||| |||| |||| Sbjct: 32931686 atcaactccgatgaggtccagtcggtggtgaagcccatcaacaaggaggtgaagctcagg 32931627 Query: 537 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctactt 595 ||||| || | ||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 32931626 gaggcgagaaggaaccctctgaagaatgtggccgctgtgctcaagctgaacccctactt 32931568
>gb|BT016670.1| Zea mays clone Contig503 mRNA sequence Length = 1384 Score = 367 bits (185), Expect = 3e-98 Identities = 299/337 (88%) Strand = Plus / Plus Query: 23 ccgcatcgagggcgtccccgagttcccgctcgtcgtctccgactcggccgagggcatcga 82 |||||||||| ||||||||| | || || ||| | |||||||| || ||| ||| || Sbjct: 469 ccgcatcgagtctgtccccgagatgccccttgtcatttccgactccgcggagtccattga 528 Query: 83 gaagacctcccaggccatcaaggtgctcgagcagctgggcgccttcgctgacgccgagaa 142 ||||||||||||||| ||||| | ||| ||||| | |||||| ||| ||||||||||| Sbjct: 529 gaagacctcccaggcgctcaagatcctcaagcagatcggcgcccacgccgacgccgagaa 588 Query: 143 ggccaaggagtctgtcggcatccgccccggcaagggtaagatgcgcaaccgcaggtacat 202 ||||||||| || ||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 589 ggccaaggactccgtcggcatccgccccggcaagggtaagatgcgcaaccgccgctacat 648 Query: 203 caaccgcaagggacccctcatcgtctacggcaccgagggctccaagatcgtcaaggcctt 262 |||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 649 caaccgcaagggcccgctcatcgtctacggcaccgagggctccaaggtcgtcaaggcctt 708 Query: 263 ccgcaacctcccaggtgtggatgttgccaacgtcgagcgcctcaacctgctcgaccttgc 322 ||||||||| || ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 709 ccgcaaccttcccggtgtggatgttgccaacgtcgagcgcctcaacctactagaccttgc 768 Query: 323 ccctggtggccaccttggccggtttgtgatctggacc 359 ||| |||||||||||||| || ||||||||||||||| Sbjct: 769 ccccggtggccaccttgggcgctttgtgatctggacc 805 Score = 161 bits (81), Expect = 3e-36 Identities = 153/177 (86%) Strand = Plus / Plus Query: 417 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 476 ||||||||||||||||| || || |||||||||||| ||||||||||||| ||| | || Sbjct: 863 aagaagaagggcttcgtgctgccgaggcctaagatgtccaacgctgacctgggcaggatc 922 Query: 477 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 536 ||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||| Sbjct: 923 atcaactctgacgaggtgcagtctgtggtgaagccactcaacaaggaggtgaagcgcagg 982 Query: 537 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccctac 593 ||| ||||||||||| || ||||| ||||| |||||||| |||||||||||| Sbjct: 983 gagaagaggaagaacccactcaagaacatggctgctgtgctcaaactcaacccctac 1039
>gb|AY109806.1| Zea mays CL21852_1 mRNA sequence Length = 863 Score = 281 bits (142), Expect = 1e-72 Identities = 212/234 (90%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 161 catccgccccggcaagggtaagatgcgcaaccgcaggtacatcaaccgcaagggacccct 220 ||||||||||| |||||| |||||||||| |||| | ||||||||||||||||||||||| Sbjct: 27 catccgccccg-caaggggaagatgcgcagccgccgctacatcaaccgcaagggacccct 85 Query: 221 catcgtctacggcaccgagggctccaagatcgtcaaggccttccgcaacctcccaggtgt 280 ||| ||||||||| | |||||||| ||||||||||||||||||||||||||||| || || Sbjct: 86 cattgtctacggcgctgagggctctaagatcgtcaaggccttccgcaacctccctggcgt 145 Query: 281 ggatgttgccaacgtcgagcgcctcaacctgctcgaccttgcccctggtggccaccttgg 340 ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 146 tgatgttgccaatgtcgagcgcctgaacctgctcgacctcgcccctggtggccaccttgg 205 Query: 341 ccggtttgtgatctggaccgagtctgccttcaagaagctggacgaggtgtacgg 394 ||||| || ||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 206 tcggttcgtcatctggaccgagtgcgcattcaagaagctggatgaggtgtacgg 259 Score = 127 bits (64), Expect = 5e-26 Identities = 103/116 (88%) Strand = Plus / Plus Query: 474 ctcatcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgc 533 |||||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||| Sbjct: 339 ctcatcaactctgacgaggtgcaatctgtggtgaagcccatcaacaaggaggtgaagcgt 398 Query: 534 agggaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaaccc 589 |||||| | ||||||||||| ||||||||| ||||| ||||||||||| ||||| Sbjct: 399 agggagcctaggaagaacccgctgaagaatatggctgcagtgctcaagctgaaccc 454
>gb|DQ363993.1| Saccharum hybrid cultivar putative 60S ribosomal protein L1 mRNA, partial cds Length = 212 Score = 149 bits (75), Expect = 1e-32 Identities = 150/175 (85%) Strand = Plus / Plus Query: 417 aagaagaagggcttcgtcctccccaggcctaagatgaccaacgctgaccttggccgcctc 476 ||||||||||||||||| || || ||||| ||||||||||||||||| || ||| | || Sbjct: 38 aagaagaagggcttcgttctgcctaggcccaagatgaccaacgctgatctgggcaggatc 97 Query: 477 atcaactctgacgaggtccagtctgttgtgaagcccatcaacaaggaggttaagcgcagg 536 ||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||| Sbjct: 98 atcaactctgacgaggtgcagtctgtggtgaagccactcaacaaggaggtgaagcgcagg 157 Query: 537 gaggccaggaagaaccctctgaagaatgctgctgccgtgctcaagctcaacccct 591 ||| |||||||||| || ||||| ||||| ||||||||||||||||||| Sbjct: 158 gagaagcggaagaacccgctcaagaacatggctgctgtgctcaagctcaacccct 212
>ref|NM_111797.2| Arabidopsis thaliana structural constituent of ribosome AT3G09630 transcript variant AT3G09630.1 mRNA, complete cds Length = 1560 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 318 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 377 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 806 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 865 Query: 378 ct 379 || Sbjct: 866 ct 867
>ref|NM_001035586.1| Arabidopsis thaliana structural constituent of ribosome AT3G09630 transcript variant AT3G09630.2 mRNA, complete cds Length = 1598 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 318 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 377 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 812 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 871 Query: 378 ct 379 || Sbjct: 872 ct 873
>gb|BT008495.1| Arabidopsis thaliana At3g09630 gene, complete cds Length = 1221 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 318 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 377 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 736 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 795 Query: 378 ct 379 || Sbjct: 796 ct 797
>gb|AY056781.1| Arabidopsis thaliana AT3g09630/F11F8_22 mRNA, complete cds Length = 1416 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 318 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 377 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 803 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 862 Query: 378 ct 379 || Sbjct: 863 ct 864
>gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11F8 genomic sequence, complete sequence Length = 107603 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 318 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 377 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 52921 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 52980 Query: 378 ct 379 || Sbjct: 52981 ct 52982
>gb|AY087963.1| Arabidopsis thaliana clone 39947 mRNA, complete sequence Length = 1406 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 318 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 377 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 806 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 865 Query: 378 ct 379 || Sbjct: 866 ct 867
>gb|BT002438.1| Arabidopsis thaliana putative 60S ribosomal protein L1 (At3g09630) mRNA, complete cds Length = 1437 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 318 cttgcccctggtggccaccttggccggtttgtgatctggaccgagtctgccttcaagaag 377 ||||| |||||||| |||||||| |||||||||||||||||| |||||||||| ||||| Sbjct: 804 cttgctcctggtggtcaccttggtcggtttgtgatctggaccaagtctgcctttgagaag 863 Query: 378 ct 379 || Sbjct: 864 ct 865
>ref|XM_753952.1| Ustilago maydis 521 hypothetical protein (UM02898.1) partial mRNA Length = 1002 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 297 gagcgcctcaacctgctcgaccttgcccctggtggccaccttggccggtttgtgatct 354 |||||||| ||||||||| | || ||||||||||| ||||||||||| ||||| |||| Sbjct: 604 gagcgcctgaacctgctccagctcgcccctggtggacaccttggccgctttgtcatct 661
>ref|NM_059015.2| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-4) (rpl-4) mRNA, complete cds Length = 1083 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 351 atctggaccgagtctgccttcaagaagct 379 ||||||||||||||||||||||||||||| Sbjct: 756 atctggaccgagtctgccttcaagaagct 784
>gb|AF000196.1| Caenorhabditis elegans cosmid B0041, complete sequence Length = 28609 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 351 atctggaccgagtctgccttcaagaagct 379 ||||||||||||||||||||||||||||| Sbjct: 2890 atctggaccgagtctgccttcaagaagct 2862
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 293 cgtcgagcgcctcaacctgctcgaccttgcccctggtggccaccttggccggtttgtgat 352 ||||||| ||||||||| ||| | || ||||||||||||||| |||| || || | || Sbjct: 561545 cgtcgagtccctcaacctcctccagctcgcccctggtggccacgttggtcgattcatcat 561486 Query: 353 ctggaccgagtctgcc 368 |||||||||||||||| Sbjct: 561485 ctggaccgagtctgcc 561470 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 474 ctcatcaactctgacgaggtccagtctgt 502 |||||||||||||||||| |||||||||| Sbjct: 561332 ctcatcaactctgacgagatccagtctgt 561304
>ref|XM_567364.1| Cryptococcus neoformans var. neoformans JEC21 Ras2 (CNJ01920) partial mRNA Length = 1164 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 293 cgtcgagcgcctcaacctgctcgaccttgcccctggtggccaccttggccggtttgtgat 352 ||||||| ||||||||| ||| | || ||||||||||||||| |||| || || | || Sbjct: 710 cgtcgagtccctcaacctcctccagctcgcccctggtggccacgttggtcgattcatcat 769 Query: 353 ctggaccgagtctgcc 368 |||||||||||||||| Sbjct: 770 ctggaccgagtctgcc 785 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 474 ctcatcaactctgacgaggtccagtctgt 502 |||||||||||||||||| |||||||||| Sbjct: 870 ctcatcaactctgacgagatccagtctgt 898
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 306 aacctgctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtct 365 |||||||| |||| || || ||||||||| ||||||| || ||||||||||| ||||| Sbjct: 425924 aacctgctgcacctggcgcccggtggccacgttggccgcttcgtgatctggacgcagtct 425983 Query: 366 gccttcaagaagctggac 383 || ||| || |||||||| Sbjct: 425984 gcgttcgagcagctggac 426001 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 306 aacctgctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtct 365 |||||||| |||| || || ||||||||| ||||||| || ||||||||||| ||||| Sbjct: 421159 aacctgctgcacctggcgcccggtggccacgttggccgcttcgtgatctggacgcagtct 421218 Query: 366 gccttcaagaagctggac 383 || ||| || |||||||| Sbjct: 421219 gcgttcgagcagctggac 421236 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 330 ggccaccttggccggtttgtgatctggaccgagtctgccttcaagaagctggac 383 |||||| ||||||| || ||||||||||| ||||||| ||| || |||||||| Sbjct: 423566 ggccacgttggccgcttcgtgatctggacgcagtctgcgttcgagcagctggac 423619
>ref|XM_842678.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0748) partial mRNA Length = 1605 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 306 aacctgctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtct 365 |||||||| |||| || || ||||||||| ||||||| || ||||||||||| ||||| Sbjct: 857 aacctgctgcacctggcgcccggtggccacgttggccgcttcgtgatctggacgcagtct 916 Query: 366 gccttcaagaagctggac 383 || ||| || |||||||| Sbjct: 917 gcgttcgagcagctggac 934
>ref|XM_842680.1| Leishmania major strain Friedlin ribosomal protein L1a (LMJ_0750) partial mRNA Length = 1122 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 306 aacctgctcgaccttgcccctggtggccaccttggccggtttgtgatctggaccgagtct 365 |||||||| |||| || || ||||||||| ||||||| || ||||||||||| ||||| Sbjct: 700 aacctgctgcacctggcgcccggtggccacgttggccgcttcgtgatctggacgcagtct 759 Query: 366 gccttcaagaagctggac 383 || ||| || |||||||| Sbjct: 760 gcgttcgagcagctggac 777
>gb|AY091907.1| Uncultured nitrogen-fixing bacterium clone Sp16-1 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 106 tgctcgagcagctgggcgccttcgctgac 134 ||||||||||||||||||||| ||||||| Sbjct: 281 tgctcgagcagctgggcgcctacgctgac 309
>dbj|AU066549.1| Chlamydomonas sp. HS-5 mRNA for 60S ribosomal protein L4, NaCl+paraquat inducible, complete cds, clone:M37 Length = 1278 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 474 ctcatcaactctgacgaggtccagtctgttgtg 506 |||||||||||||||||| ||||||| |||||| Sbjct: 864 ctcatcaactctgacgagatccagtcggttgtg 896 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 165 cgccccggcaagggtaagatgcgcaaccg 193 |||| ||||||||| |||||||||||||| Sbjct: 558 cgccgcggcaagggcaagatgcgcaaccg 586
>ref|NM_120365.2| Arabidopsis thaliana structural constituent of ribosome AT5G02870 mRNA, complete cds Length = 1460 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 321 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 367 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 786 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 832
>gb|AC009388.5| Drosophila melanogaster clone BACR11P22, complete sequence Length = 172362 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 26 catcgagggcgtccccgagttcccgctcgtcgtctccga 64 |||||| |||||| ||||||||||||| ||||| ||||| Sbjct: 35394 catcgacggcgtctccgagttcccgctggtcgtgtccga 35432
>ref|XM_362607.1| Magnaporthe grisea 70-15 hypothetical protein (MG08190.4) partial mRNA Length = 1116 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 302 cctcaacctgctcgaccttgcccctggtggccaccttgg 340 ||||||||| ||| | || |||||||||||||||||||| Sbjct: 717 cctcaacctcctccagctcgcccctggtggccaccttgg 755
>emb|X13382.1|DMRPL1R Drosophila melanogaster mRNA for put. ribosomal protein L1 Length = 1334 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 26 catcgagggcgtccccgagttcccgctcgtcgtctccga 64 |||||| |||||| ||||||||||||| ||||| ||||| Sbjct: 507 catcgacggcgtctccgagttcccgctggtcgtgtccga 545
>emb|X06881.1|DMRPL1 Drosophila gene for ribosomal protein L1 fragment Length = 720 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 26 catcgagggcgtccccgagttcccgctcgtcgtctccga 64 |||||| |||||| ||||||||||||| ||||| ||||| Sbjct: 263 catcgacggcgtctccgagttcccgctggtcgtgtccga 301
>emb|AL162973.1|ATF9G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F9G14 (ESSA project) Length = 104769 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 321 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 367 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 54047 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 54093
>gb|AY136320.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870) mRNA, complete cds Length = 1391 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 321 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 367 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 764 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 810
>gb|AY133608.1| Arabidopsis thaliana AT5g02870/F9G14_180 mRNA, complete cds Length = 924 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 321 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 367 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 442 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 488
>gb|AY114639.1| Arabidopsis thaliana 60S ribosomal protein-like protein (At5g02870) mRNA, complete cds Length = 1278 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 321 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 367 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 742 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 788
>gb|AY093384.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870) mRNA, complete cds Length = 1278 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 321 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 367 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 742 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 788
>ref|NM_079814.2| Drosophila melanogaster Ribosomal protein L4 CG5502-RA (RpL4), mRNA Length = 1462 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 26 catcgagggcgtccccgagttcccgctcgtcgtctccga 64 |||||| |||||| ||||||||||||| ||||| ||||| Sbjct: 562 catcgacggcgtctccgagttcccgctggtcgtgtccga 600
>gb|AF367314.1| Arabidopsis thaliana AT5g02870/F9G14_180 mRNA, complete cds Length = 1417 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 321 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 367 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 758 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 804
>gb|AY069485.1| Drosophila melanogaster LD21756 full length cDNA Length = 1386 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 26 catcgagggcgtccccgagttcccgctcgtcgtctccga 64 |||||| |||||| ||||||||||||| ||||| ||||| Sbjct: 500 catcgacggcgtctccgagttcccgctggtcgtgtccga 538
>gb|AY062452.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870; F9G14_180) mRNA, complete cds Length = 1376 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 321 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 367 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 763 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 809
>gb|AY059886.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870; F9G14_180) mRNA, complete cds Length = 1424 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 321 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 367 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 786 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 832
>gb|AY054479.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870; F9G14_180) mRNA, complete cds Length = 1436 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 321 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 367 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 763 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 809
>dbj|AK117624.1| Arabidopsis thaliana At5g02870 mRNA for putative 60S ribosomal protein, complete cds, clone: RAFL17-28-D01 Length = 2686 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 321 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 367 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 783 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 829
>gb|BT002088.1| Arabidopsis thaliana 60S ribosomal protein-like (At5g02870) mRNA, complete cds Length = 1278 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 321 gcccctggtggccaccttggccggtttgtgatctggaccgagtctgc 367 ||||||||||| |||||||| |||||||||| ||||| ||||||| Sbjct: 742 gcccctggtggtcaccttggtaggtttgtgatttggactaagtctgc 788
>gb|AE003763.3| Drosophila melanogaster chromosome 3R, section 101 of 118 of the complete sequence Length = 206189 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 26 catcgagggcgtccccgagttcccgctcgtcgtctccga 64 |||||| |||||| ||||||||||||| ||||| ||||| Sbjct: 31170 catcgacggcgtctccgagttcccgctggtcgtgtccga 31208
>gb|AY829692.1| Uncultured bacterium clone TF60007 nitrogenase iron protein (nifH) gene, partial cds Length = 326 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 97 ccatcaaggtgctcgagcagctgggcgcct 126 ||||||| ||||||||||||||||||||| Sbjct: 179 ccatcaatctgctcgagcagctgggcgcct 208
>gb|DQ224562.1| Uncultured bacterium clone nif1004220L64 dinitrogen reductase (nifH) gene, partial cds Length = 327 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 97 ccatcaaggtgctcgagcagctgggcgcct 126 ||||||| ||||||||||||||||||||| Sbjct: 179 ccatcaacatgctcgagcagctgggcgcct 208
>ref|XM_842679.1| Leishmania major strain Friedlin ribosomal protein L1a (LMJ_0749) partial mRNA Length = 1299 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 330 ggccaccttggccggtttgtgatctggaccgagtctgccttcaagaagctggac 383 |||||| ||||||| || ||||||||||| ||||||| ||| || |||||||| Sbjct: 725 ggccacgttggccgcttcgtgatctggacgcagtctgcgttcgagcagctggac 778
>gb|AY829781.1| Lonomia obliqua ribosomal protein 23 mRNA, complete cds Length = 825 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 ccggcaagggtaagatgcgcaaccgc 194 |||| ||||||||||||||||||||| Sbjct: 167 ccggtaagggtaagatgcgcaaccgc 192
>gb|AF518561.1| Unidentified nitrogen-fixing bacteria dinitrogenase reductase (nifH) gene, partial cds Length = 327 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 97 ccatcaaggtgctcgagcagctgggcgcct 126 ||||||| ||||||||||||||||||||| Sbjct: 179 ccatcaatctgctcgagcagctgggcgcct 208
>emb|X80162.1|HSPHP32VD Bacteriophage phi-H hp32 gene Length = 4505 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 cttcgctgacgccgagaaggcc 146 |||||||||||||||||||||| Sbjct: 74 cttcgctgacgccgagaaggcc 95
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 gacgccgagaaggccaaggag 152 ||||||||||||||||||||| Sbjct: 2049045 gacgccgagaaggccaaggag 2049025
>gb|AY232334.1| Uncultured bacterium clone GN1061A17 dinitrogenase reductase (nifH) gene, partial cds Length = 327 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 98 catcaaggtgctcgagcagctgggcgcct 126 ||||||| ||||||||||||| ||||||| Sbjct: 180 catcaagatgctcgagcagctcggcgcct 208
>ref|XM_389185.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09009.1) partial mRNA Length = 588 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 caagaagctggacgaggtgta 391 ||||||||||||||||||||| Sbjct: 72 caagaagctggacgaggtgta 92
>ref|XM_501532.1| Yarrowia lipolytica CLIB122, YALI0C06820g predicted mRNA Length = 1092 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 333 caccttggccggtttgtgatctggaccgagtctgccttcaa 373 ||||||||||| || || |||||||||||| ||||||||| Sbjct: 730 caccttggccgattcgtcatctggaccgagggtgccttcaa 770
>ref|XM_966541.1| PREDICTED: Tribolium castaneum similar to CG5502-PA (LOC660298), mRNA Length = 1369 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 327 ggtggccaccttggccggtttgtgatctggaccgagtctgccttc 371 ||||| ||| ||||||| || || |||||||||||||| |||||| Sbjct: 799 ggtggtcacgttggccgtttcgtcatctggaccgagtcggccttc 843
>gb|DQ098231.1| Uncultured nitrogen-fixing bacterium clone C43 dinitrogenase reductase (nifH) gene, partial cds Length = 361 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 tgctcgagcagctgggcgcct 126 ||||||||||||||||||||| Sbjct: 206 tgctcgagcagctgggcgcct 226
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 aagatcgtcaaggccttccgc 266 ||||||||||||||||||||| Sbjct: 970450 aagatcgtcaaggccttccgc 970470
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gctcgagcagctgggcgcctt 127 ||||||||||||||||||||| Sbjct: 27635564 gctcgagcagctgggcgcctt 27635584
>gb|AC062020.5| Homo sapiens BAC clone RP11-154O23 from 2, complete sequence Length = 170197 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 tcctttgaggcgtcttcctcc 416 ||||||||||||||||||||| Sbjct: 20700 tcctttgaggcgtcttcctcc 20720
>dbj|AP006055.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0778G11 Length = 59211 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gctcgagcagctgggcgcctt 127 ||||||||||||||||||||| Sbjct: 39747 gctcgagcagctgggcgcctt 39767
>dbj|AK109610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G02, full insert sequence Length = 1936 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gctcgagcagctgggcgcctt 127 ||||||||||||||||||||| Sbjct: 761 gctcgagcagctgggcgcctt 781
>dbj|AK102712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104O20, full insert sequence Length = 1562 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gctcgagcagctgggcgcctt 127 ||||||||||||||||||||| Sbjct: 600 gctcgagcagctgggcgcctt 580
>dbj|AK060681.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D12, full insert sequence Length = 1645 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gctcgagcagctgggcgcctt 127 ||||||||||||||||||||| Sbjct: 599 gctcgagcagctgggcgcctt 579
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 333 caccttggccggtttgtgatctggaccgagtctgccttcaa 373 ||||||||||| || || |||||||||||| ||||||||| Sbjct: 910627 caccttggccgattcgtcatctggaccgagggtgccttcaa 910667
>dbj|AP006663.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT48G05, TM0358, complete sequence Length = 111995 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 318 cttgcccctggtggccaccttggccggtttgtgatctggac 358 ||||| |||||||| |||||||| |||| ||||||||||| Sbjct: 42997 cttgcacctggtgggcaccttgggaggttcgtgatctggac 43037
>gb|AC106840.12| Mus musculus chromosome 1, clone RP24-144D4, complete sequence Length = 139608 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gacctcccaggccatcaagg 105 |||||||||||||||||||| Sbjct: 104059 gacctcccaggccatcaagg 104040
>gb|BC070998.1| Xenopus laevis tropomyosin, mRNA (cDNA clone MGC:79995 IMAGE:4032625), complete cds Length = 4864 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tccaagaagaagggcttcgt 433 |||||||||||||||||||| Sbjct: 2615 tccaagaagaagggcttcgt 2634
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 caagatcgtcaaggccttcc 264 |||||||||||||||||||| Sbjct: 964213 caagatcgtcaaggccttcc 964194
>ref|XM_824372.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.5680) partial mRNA Length = 1443 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 caaccgcaggtacatcaaccgcaa 211 ||||| |||||||||||||||||| Sbjct: 472 caacctcaggtacatcaaccgcaa 495
>gb|AC106705.7| Homo sapiens 3 BAC RP11-262L17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 100464 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 aagcgcagggaggccaggaa 547 |||||||||||||||||||| Sbjct: 52224 aagcgcagggaggccaggaa 52205
>ref|XM_646563.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (153.t00003) partial mRNA Length = 1998 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 408 tcttcctccaagaagaagggcttc 431 |||||||||||||||||| ||||| Sbjct: 1758 tcttcctccaagaagaagtgcttc 1781
>gb|AF240903.1| Cleidogona major RNA polymerase II largest subunit mRNA, partial cds Length = 419 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gacgccgagaaggccaagga 151 |||||||||||||||||||| Sbjct: 123 gacgccgagaaggccaagga 142
>ref|XM_789886.1| PREDICTED: Strongylocentrotus purpuratus similar to apobec-1 complementation factor isoform 1 (LOC590277), mRNA Length = 1221 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 agatgaccaacgctgacctt 467 |||||||||||||||||||| Sbjct: 485 agatgaccaacgctgacctt 466
>gb|AC108527.6| Rattus norvegicus 9 BAC CH230-7F11 (Children's Hospital Oakland Research Institute) complete sequence Length = 225777 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 gacctcccaggccatcaagg 105 |||||||||||||||||||| Sbjct: 113217 gacctcccaggccatcaagg 113236
>emb|AL031622.1|HS740A11 Human DNA sequence from clone RP4-740A11 on chromosome Xq22.2-23 Contains part of the COL4A5 gene for type IV alpha 5 collagen (Alport syndrome), complete sequence Length = 104674 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 agtctgttgtgaagcccatc 515 |||||||||||||||||||| Sbjct: 32043 agtctgttgtgaagcccatc 32062
>ref|XM_778380.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal protein L4 (LOC578192), mRNA Length = 1350 Score = 40.1 bits (20), Expect = 8.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 545 gaagaaccctctgaagaatgctgctgccgtgctcaagctcaaccccta 592 |||||||||||||||||| ||| | | || |||||||||||||||| Sbjct: 997 gaagaaccctctgaagaacgctagggtcatgttcaagctcaaccccta 1044
>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence Length = 1857073 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agatgcgcaaccgcaggtac 200 |||||||||||||||||||| Sbjct: 319738 agatgcgcaaccgcaggtac 319757
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 acggcaccgagggctccaag 248 |||||||||||||||||||| Sbjct: 907125 acggcaccgagggctccaag 907106
>gb|AC136742.15| Mus musculus chromosome 5, clone RP23-145H8, complete sequence Length = 197131 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 agaagacctcccaggccatc 101 |||||||||||||||||||| Sbjct: 107460 agaagacctcccaggccatc 107479
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 gctcgagcagctgggcgccttcgc 130 |||||||||||||| ||||||||| Sbjct: 2324573 gctcgagcagctggtcgccttcgc 2324550
>gb|AE004887.1| Pseudomonas aeruginosa PAO1, section 448 of 529 of the complete genome Length = 10139 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 313 tcgaccttgcccctggtggccaccttggccgg 344 |||||||||||| || || ||||||||||||| Sbjct: 7683 tcgaccttgcccttgatgtccaccttggccgg 7652
>gb|AF236858.1|AF236858 Xenopus laevis alphafast-tropomyosin gene, partial cds, alternatively spliced Length = 2790 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tccaagaagaagggcttcgt 433 |||||||||||||||||||| Sbjct: 1860 tccaagaagaagggcttcgt 1879
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 catcgagaagacctcccagg 96 |||||||||||||||||||| Sbjct: 4833844 catcgagaagacctcccagg 4833863
>dbj|AB175022.1| Burkholderia cepacia cheS, limS genes for cholesterol esterase, lipase chaperone, complete cds Length = 3048 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 292 acgtcgagcgcctcaacctgctcgaccttgcc 323 |||||||||||||| |||||| ||||| |||| Sbjct: 2156 acgtcgagcgcctcgacctgcgcgaccgtgcc 2125
>ref|XM_311909.2| Anopheles gambiae str. PEST ENSANGP00000010912 (ENSANGG00000008423), partial mRNA Length = 7578 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 gccttcaagaagctggacga 385 |||||||||||||||||||| Sbjct: 2089 gccttcaagaagctggacga 2108
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agatgcgcaaccgcaggtac 200 |||||||||||||||||||| Sbjct: 1594303 agatgcgcaaccgcaggtac 1594322
>gb|BT001354.1| Drosophila melanogaster AT27295 full insert cDNA Length = 2102 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 tggccaccttggccggtttg 348 |||||||||||||||||||| Sbjct: 1220 tggccaccttggccggtttg 1239
>gb|U68183.1|DGU68183 Desulfovibrio gigas Fe protein of nitrogenase (nifH) gene, complete cds, and unknown protein gene, partial sequence Length = 1450 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 97 ccatcaaggtgctcgagcagctgggcgccttc 128 ||||||| |||| |||||||||||||||||| Sbjct: 547 ccatcaacctgctggagcagctgggcgccttc 578 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,260,056 Number of Sequences: 3902068 Number of extensions: 4260056 Number of successful extensions: 90637 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 89823 Number of HSP's gapped (non-prelim): 798 length of query: 602 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 579 effective length of database: 17,143,297,704 effective search space: 9925969370616 effective search space used: 9925969370616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
