Clone Name	bags24l24
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	RS9_PODAN (P52810) 40S ribosomal protein S9 (S7)	194	5e-50
2	RS9_DICDI (P14132) 40S ribosomal protein S9 (40S ribosomal prote...	189	1e-48
3	RS9_RAT (P29314) 40S ribosomal protein S9	187	5e-48
4	RS9_MOUSE (Q6ZWN5) 40S ribosomal protein S9	187	5e-48
5	RS9_HUMAN (P46781) 40S ribosomal protein S9	187	5e-48
6	RS9B_SCHPO (O59675) 40S ribosomal protein S9-B	184	3e-47
7	RS9_DROME (P55935) 40S ribosomal protein S9	184	3e-47
8	RS9A_SCHPO (Q09757) 40S ribosomal protein S9-A	184	6e-47
9	RS9B_YEAST (P05755) 40S ribosomal protein S9-B (S13) (YS11) (RP2...	180	6e-46
10	RS9_TRYBB (P17959) Probable 40S ribosomal protein S9	180	6e-46
11	RS9A_YEAST (O13516) 40S ribosomal protein S9-A (S13) (YS11) (RP2...	179	1e-45
12	RS9_CAEEL (Q20228) 40S ribosomal protein S9	175	3e-44
13	RS9_PIG (Q29197) 40S ribosomal protein S9 (Fragment)	170	6e-43
14	RS9_NAEFO (Q25555) 40S ribosomal protein S9	167	4e-42
15	RS9_ENTHI (O15612) 40S ribosomal protein S9 (Fragment)	154	5e-38
16	RS4_THEAC (Q9HJD7) 30S ribosomal protein S4P	104	4e-23
17	RS4_THEVO (Q97B95) 30S ribosomal protein S4P	100	1e-21
18	RS4_METKA (Q8TVC0) 30S ribosomal protein S4P	98	5e-21
19	RS4_METJA (P54020) 30S ribosomal protein S4P	97	1e-20
20	RS4_AERPE (Q9YB58) 30S ribosomal protein S4P	94	8e-20
21	RS4_SULAC (P39467) 30S ribosomal protein S4P	94	1e-19
22	RS4_PYRHO (O59306) 30S ribosomal protein S4P	92	2e-19
23	RS4_PICTO (Q6KZP7) 30S ribosomal protein S4P	92	2e-19
24	RS4_ARCFU (O28000) 30S ribosomal protein S4P	92	3e-19
25	RS4_PYRFU (P61993) 30S ribosomal protein S4P	92	3e-19
26	RS4_PYRAB (P61992) 30S ribosomal protein S4P	92	3e-19
27	RS4_SULTO (Q96YV8) 30S ribosomal protein S4P	91	5e-19
28	RS4_PYRKO (Q5JJF2) 30S ribosomal protein S4P	89	3e-18
29	RS4_PYRAE (Q8ZTV1) 30S ribosomal protein S4P	88	4e-18
30	RS4_SULSO (P95987) 30S ribosomal protein S4P	88	4e-18
31	RS4_METBF (Q46GC8) 30S ribosomal protein S4P	88	4e-18
32	RS4_METTH (O26142) 30S ribosomal protein S4P	87	1e-17
33	RS4_HALMA (Q00862) 30S ribosomal protein S4P (HmaS4)	85	5e-17
34	RS4_METMP (Q6LXN0) 30S ribosomal protein S4P	84	6e-17
35	RS4_HALSA (Q9HQJ6) 30S ribosomal protein S4P	81	5e-16
36	RS4_METMA (Q8PV18) 30S ribosomal protein S4P	79	2e-15
37	RS4_METAC (Q8TRR1) 30S ribosomal protein S4P	78	4e-15
38	RS4_NANEQ (Q74NF7) 30S ribosomal protein S4P	77	1e-14
39	RS4_NATPD (Q3IQT8) 30S ribosomal protein S4P	75	3e-14
40	IMP3_MOUSE (Q921Y2) U3 small nucleolar ribonucleoprotein protein...	60	9e-10
41	IMP3_BOVIN (Q3T0M3) U3 small nucleolar ribonucleoprotein protein...	60	1e-09
42	IMP3_HUMAN (Q9NV31) U3 small nucleolar ribonucleoprotein protein...	55	3e-08
43	RS9_TOBAC (P49214) 40S ribosomal protein S9 (S4) (Fragment)	46	2e-05
44	IMP3_SCHPO (O13835) U3 small nucleolar ribonucleoprotein protein...	40	0.001
45	YS4L_CAEEL (O01513) Putative 40S ribosomal protein S4-like	40	0.002
46	RS4_PELCD (Q3A6M1) 30S ribosomal protein S4	37	0.011
47	IMP3_YEAST (P32899) U3 small nucleolar ribonucleoprotein protein...	37	0.015
48	RR4_OENHO (Q9MTP1) Chloroplast 30S ribosomal protein S4	36	0.019
49	RR4_LOTJA (Q9BBT5) Chloroplast 30S ribosomal protein S4	36	0.019
50	RR4_WATAN (O20399) Chloroplast 30S ribosomal protein S4 (Fragment)	36	0.025
51	RR4_DENGI (P36454) Chloroplast 30S ribosomal protein S4 (Fragment)	36	0.025
52	RR4_SOYBN (Q2PMU5) Chloroplast 30S ribosomal protein S4	36	0.025
53	RR4_CUCSA (Q4VZH3) Chloroplast 30S ribosomal protein S4	36	0.025
54	RR4_DIERO (O20210) Chloroplast 30S ribosomal protein S4 (Fragment)	35	0.032
55	RR4_DIEGR (O20208) Chloroplast 30S ribosomal protein S4 (Fragment)	35	0.032
56	RR4_BRYCA (P59135) Chloroplast 30S ribosomal protein S4	35	0.032
57	RR4_CALFE (Q7YJX0) Chloroplast 30S ribosomal protein S4	35	0.032
58	RT04_RECAM (O21263) Mitochondrial ribosomal protein S4	35	0.042
59	RR4_SPLSP (Q9FS90) Chloroplast 30S ribosomal protein S4	35	0.042
60	RS4A_SYMTH (Q67JX0) 30S ribosomal protein S4 A	35	0.042
61	RR4_TOBAC (P06359) Chloroplast 30S ribosomal protein S4	35	0.042
62	RR4_PANGI (Q68S04) Chloroplast 30S ribosomal protein S4	35	0.042
63	RR4_NICTO (Q33C33) Chloroplast 30S ribosomal protein S4	35	0.042
64	RR4_NICSY (Q3C1H5) Chloroplast 30S ribosomal protein S4	35	0.042
65	RR4_LACSA (Q332X6) Chloroplast 30S ribosomal protein S4	35	0.042
66	RR4_FUNHY (Q9SMG1) Chloroplast 30S ribosomal protein S4	35	0.042
67	RR4_EUCGG (Q49KZ6) Chloroplast 30S ribosomal protein S4	35	0.042
68	RR4_ATRBE (Q8S8X2) Chloroplast 30S ribosomal protein S4	35	0.042
69	RS4_DESPS (Q6AP44) 30S ribosomal protein S4	35	0.042
70	RR4_YUCFI (P69679) Chloroplast 30S ribosomal protein S4 (Fragment)	35	0.055
71	RR4_AGABR (P69629) Chloroplast 30S ribosomal protein S4 (Fragment)	35	0.055
72	RR4_OROMI (O78678) Plastid 30S ribosomal protein S4	35	0.055
73	RR4_SPIOL (P13788) Chloroplast 30S ribosomal protein S4	35	0.055
74	RR4_SOLTU (Q2VEH5) Chloroplast 30S ribosomal protein S4	35	0.055
75	RR4_SOLBU (Q2MII5) Chloroplast 30S ribosomal protein S4	35	0.055
76	RR4_PHYPA (Q6YXP3) Chloroplast 30S ribosomal protein S4	35	0.055
77	RR4_PHAAO (Q3BAN8) Chloroplast 30S ribosomal protein S4	35	0.055
78	RR4_LYCES (Q2MI98) Chloroplast 30S ribosomal protein S4	35	0.055
79	RR4_GOSHI (Q2L908) Chloroplast 30S ribosomal protein S4	35	0.055
80	RR4_AMBTC (Q70Y01) Chloroplast 30S ribosomal protein S4	35	0.055
81	RR4_RHAHU (P36470) Chloroplast 30S ribosomal protein S4 (Fragment)	34	0.072
82	RR4_LEUSC (P59146) Chloroplast 30S ribosomal protein S4	34	0.072
83	RR4_HYPCP (P59142) Chloroplast 30S ribosomal protein S4	34	0.072
84	RR4_HUPLU (Q5SD08) Chloroplast 30S ribosomal protein S4	34	0.072
85	RR4_HOOLU (P59139) Chloroplast 30S ribosomal protein S4	34	0.072
86	RR4_TIGSP (O36057) Chloroplast 30S ribosomal protein S4 (Fragment)	34	0.094
87	RR4_SISST (P69652) Chloroplast 30S ribosomal protein S4 (Fragment)	34	0.094
88	RR4_SISSP (P69651) Chloroplast 30S ribosomal protein S4 (Fragment)	34	0.094
89	RR4_NEOSP (O36051) Chloroplast 30S ribosomal protein S4 (Fragment)	34	0.094
90	RR4_LIBFO (O20254) Chloroplast 30S ribosomal protein S4 (Fragment)	34	0.094
91	RR4_ISOTA (O20236) Chloroplast 30S ribosomal protein S4 (Fragment)	34	0.094
92	RR4_IRILU (O20235) Chloroplast 30S ribosomal protein S4 (Fragment)	34	0.094
93	RR4_CYPSP (O20106) Chloroplast 30S ribosomal protein S4 (Fragment)	34	0.094
94	RR4_ALOVE (O19986) Chloroplast 30S ribosomal protein S4 (Fragment)	34	0.094
95	RR4_IRIPA (P36461) Chloroplast 30S ribosomal protein S4 (Fragment)	34	0.094
96	RR4_ASPSB (O47026) Chloroplast 30S ribosomal protein S4 (Fragment)	34	0.094
97	RR4_SPHDO (Q9FSA4) Chloroplast 30S ribosomal protein S4	34	0.094
98	RR4_HYPAR (P59141) Chloroplast 30S ribosomal protein S4	34	0.094
99	RR4_HYLSP (P59140) Chloroplast 30S ribosomal protein S4	34	0.094
100	RS4_BACHD (Q9K7Z8) 30S ribosomal protein S4	34	0.094
101	RR4_ORYSA (P12147) Chloroplast 30S ribosomal protein S4	34	0.094
102	RR4_ORYNI (Q6ENH2) Chloroplast 30S ribosomal protein S4	34	0.094
103	RR4_SPASP (O36054) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
104	RR4_MICJU (P69647) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
105	RR4_LAPNE (O20255) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
106	RR4_GLACO (P69643) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
107	RR4_FRESP (O20215) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
108	RR4_CROSP (O20103) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
109	RR4_CRONU (P69639) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
110	RR4_BABST (O19995) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
111	RR4_ARIPL (P69633) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
112	RR4_ARICA (P69632) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
113	RR4_TRISA (O20291) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
114	RR4_MORST (O20264) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
115	RR4_FURGI (O20213) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
116	RR4_BOBGL (O19992) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
117	RR4_NERBO (O20265) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
118	RR4_HYMLI (O20230) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
119	RR4_HEAMA (O20231) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
120	RR4_NAROD (O47029) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
121	RR4_DIPFO (Q9M4B9) Chloroplast 30S ribosomal protein S4	33	0.12
122	RR4_CATCI (P59137) Chloroplast 30S ribosomal protein S4	33	0.12
123	RR4_GLAPA (O20221) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
124	RR4_PILTE (O20278) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
125	RR4_GLAMU (O20219) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.12
126	RR4_ACOCL (Q3V532) Chloroplast 30S ribosomal protein S4	33	0.12
127	RR4_IRIEN (O20234) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.16
128	RR4_BELCH (O19990) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.16
129	RR4_TRARA (P36473) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.16
130	RR4_MELUN (P36466) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.16
131	RR4_MELAL (P36465) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.16
132	RR4_ELEIN (P36456) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.16
133	RR4_CANTA (P59136) Chloroplast 30S ribosomal protein S4	33	0.16
134	RS4_STAS1 (Q49YF2) 30S ribosomal protein S4	33	0.16
135	RR4_PELNE (Q9FSD9) Chloroplast 30S ribosomal protein S4	33	0.16
136	RR4_PATSQ (O36052) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.21
137	RR4_LYGSP (P36464) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.21
138	RS4_STAES (Q8CS54) 30S ribosomal protein S4	33	0.21
139	RS4_STAEQ (Q5HNI5) 30S ribosomal protein S4	33	0.21
140	RS4B_NITEU (Q82T00) 30S ribosomal protein S4 B	33	0.21
141	RR4_PINKO (Q85WX8) Chloroplast 30S ribosomal protein S4	33	0.21
142	RR4_PATFR (O20273) Chloroplast 30S ribosomal protein S4 (Fragment)	33	0.21
143	RR4_CYAME (O22020) Chloroplast 30S ribosomal protein S4	32	0.27
144	RR4_TRIRO (P69654) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
145	RR4_TRIDA (P69653) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
146	RR4_STICA (P36472) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
147	RR4_SETVI (P69650) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
148	RR4_PHYFL (P69649) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
149	RR4_PHLPR (P69648) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
150	RR4_PENVI (P36467) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
151	RR4_LOLPR (P69646) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
152	RR4_LAMAU (P69645) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
153	RR4_HORMA (P69644) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
154	RR4_FESPR (P36459) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
155	RR4_FESGI (P69642) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
156	RR4_ELYCA (P69641) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
157	RR4_DESFL (P69640) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
158	RR4_CINLA (P69638) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
159	RR4_CALEP (P69637) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
160	RR4_BROER (P36451) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
161	RR4_ARUJA (P69634) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
162	RR4_ANDIS (P69631) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
163	RR4_ALOPR (P69630) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.27
164	RS4_GEOMG (Q39XY0) 30S ribosomal protein S4	32	0.27
165	RR4_RICNA (Q9M4C2) Chloroplast 30S ribosomal protein S4	32	0.27
166	RR4_MARPO (P06358) Chloroplast 30S ribosomal protein S4	32	0.27
167	RS4_LACAC (Q5FKX2) 30S ribosomal protein S4	32	0.27
168	RR4_WOOUN (P59152) Chloroplast 30S ribosomal protein S4	32	0.27
169	RR4_WOORA (P59151) Chloroplast 30S ribosomal protein S4	32	0.27
170	RR4_WHEAT (Q95H61) Chloroplast 30S ribosomal protein S4	32	0.27
171	RR4_SACOF (Q6ENW1) Chloroplast 30S ribosomal protein S4	32	0.27
172	RR4_SACHY (Q6L397) Chloroplast 30S ribosomal protein S4	32	0.27
173	RR4_MAIZE (P02355) Chloroplast 30S ribosomal protein S4 (Basic p...	32	0.27
174	RR4_BRASY (P69636) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.36
175	RR4_BRAPI (P69635) Chloroplast 30S ribosomal protein S4 (Fragment)	32	0.36
176	RS4_CARHZ (Q3A9U3) 30S ribosomal protein S4	32	0.36
177	RR4_PLAAD (Q9FSE4) Chloroplast 30S ribosomal protein S4	32	0.36
178	RR4_MONFO (Q9M4C1) Chloroplast 30S ribosomal protein S4	32	0.36
179	RR4_EPIVI (P30056) Plastid 30S ribosomal protein S4	32	0.36
180	RR4_ANTFO (Q85AX4) Chloroplast 30S ribosomal protein S4	32	0.36
181	RS4_STRCO (Q9KXP5) 30S ribosomal protein S4	32	0.47
182	RS4_STRAW (Q827S7) 30S ribosomal protein S4	32	0.47
183	RR4_NECCR (P59149) Chloroplast 30S ribosomal protein S4	32	0.47
184	RR4_HAPHO (Q9M4C0) Chloroplast 30S ribosomal protein S4	32	0.47
185	RR4_ANTPU (Q9FTC7) Chloroplast 30S ribosomal protein S4	32	0.47
186	RR4_ANTOD (P36447) Chloroplast 30S ribosomal protein S4 (Fragment)	31	0.61
187	RS4_GEOSL (Q749B2) 30S ribosomal protein S4	31	0.61
188	RR4_FRUTA (Q9FSU1) Chloroplast 30S ribosomal protein S4	31	0.61
189	RR4_FRUDI (Q9FSV6) Chloroplast 30S ribosomal protein S4	31	0.61
190	RR4A_CYACA (Q9TLY7) Chloroplast 30S ribosomal protein S4	31	0.61
191	RR4_ADICA (Q85FL8) Chloroplast 30S ribosomal protein S4	31	0.61
192	RS4_BACLD (Q65G42) 30S ribosomal protein S4	31	0.61
193	RR4_PLARP (Q9M4C3) Chloroplast 30S ribosomal protein S4	31	0.80
194	RR4_FRUPO (Q9FSV5) Chloroplast 30S ribosomal protein S4	31	0.80
195	RR4_EMIHU (Q4G3A4) Chloroplast 30S ribosomal protein S4	31	0.80
196	RR4_ROMRE (O20280) Chloroplast 30S ribosomal protein S4 (Fragment)	31	0.80
197	RS4_LEIXX (Q6AFA4) 30S ribosomal protein S4	31	0.80
198	RS4_LACPL (Q88UX0) 30S ribosomal protein S4	30	1.4
199	RS4_OCEIH (P59130) 30S ribosomal protein S4	30	1.4
200	RS4_BACFR (Q64NN4) 30S ribosomal protein S4	30	1.4
201	RS4_BACFN (Q5L8D5) 30S ribosomal protein S4	30	1.4
202	RS4_THETN (Q8R7Y1) 30S ribosomal protein S4	29	2.3
203	RS4_NITWN (Q3ST14) 30S ribosomal protein S4	29	2.3
204	LMNA_CHICK (P13648) Lamin-A	29	2.3
205	RS4_ZYMMO (Q9Z5U7) 30S ribosomal protein S4	29	3.0
206	RS4_PELUB (Q4FLJ0) 30S ribosomal protein S4	29	3.0
207	RR4_GUITH (P17072) Chloroplast 30S ribosomal protein S4	29	3.0
208	CHD4_HUMAN (Q14839) Chromodomain helicase-DNA-binding protein 4 ...	29	3.0
209	RS4_PELLD (Q3B6D7) 30S ribosomal protein S4	29	3.0
210	RS4_LACJO (Q74K05) 30S ribosomal protein S4	29	3.0
211	RS4_BACTN (Q8A4A1) 30S ribosomal protein S4	29	3.0
212	SOX7_MOUSE (P40646) Transcription factor SOX-7 (mSOX7)	28	4.0
213	CH60_MYCGE (P47632) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	28	4.0
214	PCSK9_HUMAN (Q8NBP7) Proprotein convertase subtilisin/kexin type...	28	5.2
215	DDPS7_ARATH (Q8LED0) Dehydrodolichyl diphosphate synthase 7 (EC ...	28	5.2
216	CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3...	28	5.2
217	RS4_CHLCH (Q3APJ9) 30S ribosomal protein S4	28	5.2
218	YS4L_PNECA (Q01688) Putative 40S ribosomal protein S4-like (Frag...	28	6.8
219	RR4B_CYACA (O22029) Chloroplast 30S ribosomal protein S4	28	6.8
220	RS4_DESVH (Q72CF5) 30S ribosomal protein S4	28	6.8
221	FAF_DROME (P55824) Probable ubiquitin carboxyl-terminal hydrolas...	28	6.8
222	VE4_HPV5B (P26550) Probable protein E4	27	8.8
223	ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arab...	27	8.8
224	O10Q1_HUMAN (Q8NGQ4) Olfactory receptor 10Q1	27	8.8
225	TRPS1_XENLA (Q90ZS6) Zinc finger transcription factor Trps1	27	8.8
226	RS4_LEPIN (Q9XD10) 30S ribosomal protein S4	27	8.8
227	RS4_LEPIC (Q72NI7) 30S ribosomal protein S4	27	8.8
228	FLNB_MOUSE (Q80X90) Filamin-B (FLN-B) (Beta-filamin) (Actin-bind...	27	8.8
229	MYO10_BOVIN (P79114) Myosin-10 (Myosin X)	27	8.8
230	LYAM2_CANFA (P33730) E-selectin precursor (Endothelial leukocyte...	27	8.8

---

>RS9_PODAN (P52810) 40S ribosomal protein S9 (S7)|
          Length = 190

 Score =  194 bits (492), Expect = 5e-50
 Identities = 98/135 (72%), Positives = 114/135 (84%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 186
           R+Y KT K PRRP+E  RLD+ELKLVGEYGLR KRE+WRV   LS+IR AAR LLTLDEK
Sbjct: 4   RSYSKTAKVPRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARELLTLDEK 63

Query: 187 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHA 366
           +P+R+FEG AL+RR+ R G+L E + KLDYVLAL AE+FL RRLQTL +K G+AKSIHHA
Sbjct: 64  DPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHA 123

Query: 367 RVLIRQRHIRVGRQI 411
           RVLIRQRHIRVG+QI
Sbjct: 124 RVLIRQRHIRVGKQI 138

---

>RS9_DICDI (P14132) 40S ribosomal protein S9 (40S ribosomal protein 1024)|
           (Vegetative-specific protein V12)
          Length = 185

 Score =  189 bits (481), Expect = 1e-48
 Identities = 89/134 (66%), Positives = 115/134 (85%)
 Frame = +1

Query: 10  NYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKN 189
           NY KT   PRRP+EKER+DAELK+VGE+GL+ K E+WRVQYAL++IR AAR LL LDEK+
Sbjct: 4   NYSKTSHTPRRPFEKERIDAELKVVGEFGLKNKNEVWRVQYALAKIRKAARELLVLDEKD 63

Query: 190 PRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHAR 369
           P+RIFEG+ALLRR+++ G++ E ++KLDY+L L  ++F+ RRLQTL FK G+AKSIHHAR
Sbjct: 64  PKRIFEGSALLRRLHKLGVMEESKNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHAR 123

Query: 370 VLIRQRHIRVGRQI 411
           VLI+ RHIRVG+Q+
Sbjct: 124 VLIKGRHIRVGKQL 137

---

>RS9_RAT (P29314) 40S ribosomal protein S9|
          Length = 193

 Score =  187 bits (475), Expect = 5e-48
 Identities = 92/131 (70%), Positives = 110/131 (83%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR AAR LLTLDEK+PRR
Sbjct: 10  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 69

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
           +FEG ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT  FK G+AKSIHHARVLI
Sbjct: 70  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 129

Query: 379 RQRHIRVGRQI 411
           RQRHIRV +Q+
Sbjct: 130 RQRHIRVRKQV 140

---

>RS9_MOUSE (Q6ZWN5) 40S ribosomal protein S9|
          Length = 193

 Score =  187 bits (475), Expect = 5e-48
 Identities = 92/131 (70%), Positives = 110/131 (83%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR AAR LLTLDEK+PRR
Sbjct: 10  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 69

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
           +FEG ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT  FK G+AKSIHHARVLI
Sbjct: 70  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 129

Query: 379 RQRHIRVGRQI 411
           RQRHIRV +Q+
Sbjct: 130 RQRHIRVRKQV 140

---

>RS9_HUMAN (P46781) 40S ribosomal protein S9|
          Length = 193

 Score =  187 bits (475), Expect = 5e-48
 Identities = 92/131 (70%), Positives = 110/131 (83%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR AAR LLTLDEK+PRR
Sbjct: 10  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 69

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
           +FEG ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT  FK G+AKSIHHARVLI
Sbjct: 70  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 129

Query: 379 RQRHIRVGRQI 411
           RQRHIRV +Q+
Sbjct: 130 RQRHIRVRKQV 140

---

>RS9B_SCHPO (O59675) 40S ribosomal protein S9-B|
          Length = 191

 Score =  184 bits (468), Expect = 3e-47
 Identities = 93/135 (68%), Positives = 108/135 (80%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 186
           R   KT+K PRRP+E  RLDAELKL GEYGLR K E+WRV   LS+IR AAR LLTLDEK
Sbjct: 5   RKQSKTYKVPRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEK 64

Query: 187 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHA 366
           +P+R+FEG A++RR+ R G+L E + KLDYVLAL  E+FL RRLQT  FK G+AKSIHHA
Sbjct: 65  DPKRLFEGNAIIRRLVRLGILDESRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHA 124

Query: 367 RVLIRQRHIRVGRQI 411
           RVLI QRHIRVG+QI
Sbjct: 125 RVLIFQRHIRVGKQI 139

---

>RS9_DROME (P55935) 40S ribosomal protein S9|
          Length = 195

 Score =  184 bits (468), Expect = 3e-47
 Identities = 91/133 (68%), Positives = 110/133 (82%)
 Frame = +1

Query: 13  YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNP 192
           + KT+  PRRPYEK RLD ELK++GEYGLR KRE+WRV+YAL++IR AAR LLTLDEK+ 
Sbjct: 10  FSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDE 69

Query: 193 RRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARV 372
           +R+F+G ALLRR+ R G+L E + KLDYVL L  E+FL RRLQT  FK G+AKSIHHARV
Sbjct: 70  KRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARV 129

Query: 373 LIRQRHIRVGRQI 411
           LIRQRHIRV +Q+
Sbjct: 130 LIRQRHIRVRKQV 142

---

>RS9A_SCHPO (Q09757) 40S ribosomal protein S9-A|
          Length = 190

 Score =  184 bits (466), Expect = 6e-47
 Identities = 93/135 (68%), Positives = 108/135 (80%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 186
           R   KT+K PRRP+E  RLDAELKL GEYGLR K E+WRV   LS+IR AAR LLTLDEK
Sbjct: 5   RKQSKTYKVPRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEK 64

Query: 187 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHA 366
           +P+R+FEG A++RR+ R G+L E + KLDYVLAL  E+FL RRLQT  FK G+AKSIHHA
Sbjct: 65  DPKRLFEGNAIIRRLVRLGILDETRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHA 124

Query: 367 RVLIRQRHIRVGRQI 411
           RVLI QRHIRVG+QI
Sbjct: 125 RVLIFQRHIRVGKQI 139

---

>RS9B_YEAST (P05755) 40S ribosomal protein S9-B (S13) (YS11) (RP21) (YP28)|
          Length = 194

 Score =  180 bits (457), Expect = 6e-46
 Identities = 87/135 (64%), Positives = 109/135 (80%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 186
           R Y KT+  P+RPYE  RLDAELKL GE+GL+ KRE++R+ + LS+IR AAR LLT DEK
Sbjct: 5   RTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKREIYRISFQLSKIRRAARDLLTRDEK 64

Query: 187 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHA 366
           +P+R+FEG AL+RR+ R G+L+E + KLDYVLAL  E+FL RRLQT  +K G+AKS+HHA
Sbjct: 65  DPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHA 124

Query: 367 RVLIRQRHIRVGRQI 411
           RVLI QRHI VG+QI
Sbjct: 125 RVLITQRHIAVGKQI 139

---

>RS9_TRYBB (P17959) Probable 40S ribosomal protein S9|
          Length = 190

 Score =  180 bits (457), Expect = 6e-46
 Identities = 84/136 (61%), Positives = 108/136 (79%)
 Frame = +1

Query: 4   YRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDE 183
           Y N+ + +K PRRP+EKERLD E+KL G+YGLRCKRE+WRV   LS++R  AR LLTL E
Sbjct: 4   YNNFNRVWKAPRRPFEKERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPE 63

Query: 184 KNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHH 363
            +PRR+ EG+A++RR + YG L E +DKLDYVL+LT  + L RRLQT+ FK G+AKS+HH
Sbjct: 64  NHPRRLLEGSAIMRRCHGYGFLDEDKDKLDYVLSLTVPDILERRLQTVVFKHGLAKSVHH 123

Query: 364 ARVLIRQRHIRVGRQI 411
           +RVLI+QRHI V +QI
Sbjct: 124 SRVLIQQRHIAVAKQI 139

---

>RS9A_YEAST (O13516) 40S ribosomal protein S9-A (S13) (YS11) (RP21) (YP28)|
          Length = 196

 Score =  179 bits (454), Expect = 1e-45
 Identities = 86/135 (63%), Positives = 109/135 (80%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 186
           R Y KT+  P+RPYE  RLDAELKL GE+GL+ K+E++R+ + LS+IR AAR LLT DEK
Sbjct: 5   RTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKKEIYRISFQLSKIRRAARDLLTRDEK 64

Query: 187 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHA 366
           +P+R+FEG AL+RR+ R G+L+E + KLDYVLAL  E+FL RRLQT  +K G+AKS+HHA
Sbjct: 65  DPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHA 124

Query: 367 RVLIRQRHIRVGRQI 411
           RVLI QRHI VG+QI
Sbjct: 125 RVLITQRHIAVGKQI 139

---

>RS9_CAEEL (Q20228) 40S ribosomal protein S9|
          Length = 189

 Score =  175 bits (443), Expect = 3e-44
 Identities = 84/131 (64%), Positives = 107/131 (81%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           K  K PRRP+EKERLD ELKL+G +GL+ KRE+WRV+Y L+++R AAR LLTL++K+P+R
Sbjct: 10  KVTKSPRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKR 69

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
           +FEG ALLRR+ + G+L E + KLDYVL L  E+FL RRLQT  FK G+AKSIHHAR+LI
Sbjct: 70  LFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILI 129

Query: 379 RQRHIRVGRQI 411
           +Q HIRV RQ+
Sbjct: 130 KQHHIRVRRQV 140

---

>RS9_PIG (Q29197) 40S ribosomal protein S9 (Fragment)|
          Length = 130

 Score =  170 bits (431), Expect = 6e-43
 Identities = 84/122 (68%), Positives = 100/122 (81%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR AAR LLTLDEK+PRR
Sbjct: 9   KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 68

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
           +FEG ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT  FK G+A SIHH RVLI
Sbjct: 69  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAXSIHHXRVLI 128

Query: 379 RQ 384
           RQ
Sbjct: 129 RQ 130

---

>RS9_NAEFO (Q25555) 40S ribosomal protein S9|
          Length = 186

 Score =  167 bits (424), Expect = 4e-42
 Identities = 83/135 (61%), Positives = 104/135 (77%)
 Frame = +1

Query: 4   YRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDE 183
           YR + K    PRRP+EKER+D ELK+ G+YGL+ K+E+WR+QY L+R R  ARHLLTL E
Sbjct: 7   YRVHSKVSLPPRRPFEKERMDRELKMCGKYGLKNKQEIWRLQYYLARARKTARHLLTLPE 66

Query: 184 KNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHH 363
            + +R FEGAALLRRM R GLL E + +LDY+L+L  E+ L RRLQT+  K G++KSIHH
Sbjct: 67  DDMKRQFEGAALLRRMTRLGLLDESKQQLDYILSLKTEDLLERRLQTVVQKLGLSKSIHH 126

Query: 364 ARVLIRQRHIRVGRQ 408
           AR LI QRHIRVG+Q
Sbjct: 127 ARQLIFQRHIRVGKQ 141

---

>RS9_ENTHI (O15612) 40S ribosomal protein S9 (Fragment)|
          Length = 144

 Score =  154 bits (389), Expect = 5e-38
 Identities = 74/135 (54%), Positives = 101/135 (74%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 186
           RN+  T+K P+ PYE+ER DAELKLVG++GL+ K+E+ RV Y L  +R  A+ +L  D K
Sbjct: 2   RNHSITYKTPKVPYERERFDAELKLVGQFGLKNKKEIQRVHYMLGHMRTIAKVMLMKDAK 61

Query: 187 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHA 366
           +P+R+ EGAALLRR++  G+L   Q+KL++VLAL  EN L RRLQTL ++ G  KSIHHA
Sbjct: 62  DPKRLLEGAALLRRLHNLGILPRDQNKLEFVLALKEENLLERRLQTLVYRKGFGKSIHHA 121

Query: 367 RVLIRQRHIRVGRQI 411
           RVLIR + I+ G+Q+
Sbjct: 122 RVLIRGKMIKAGKQV 136

---

>RS4_THEAC (Q9HJD7) 30S ribosomal protein S4P|
          Length = 199

 Score =  104 bits (260), Expect = 4e-23
 Identities = 62/135 (45%), Positives = 88/135 (65%), Gaps = 4/135 (2%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHL---LTLDEKN 189
           K +  PR P+EKER+D E K+V +YGL+ K+E+WR +  LS IR+ AR L   L  ++ N
Sbjct: 9   KKYSTPRHPWEKERIDEENKIVVKYGLKNKKEIWRSEALLSSIRSQARDLRARLRTNDVN 68

Query: 190 PRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHAR 369
            ++  E   +++R+NRY LL+E    LD VL+LT EN L RRLQT+ F+  +A S+  AR
Sbjct: 69  AQKQLE--RMIKRLNRYKLLSENA-TLDDVLSLTVENILDRRLQTIVFRKNLAISVRQAR 125

Query: 370 VLIRQRHIRV-GRQI 411
            LI   HI V GR++
Sbjct: 126 QLITHGHISVAGRRV 140

---

>RS4_THEVO (Q97B95) 30S ribosomal protein S4P|
          Length = 200

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 59/135 (43%), Positives = 88/135 (65%), Gaps = 4/135 (2%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHL---LTLDEKN 189
           K +  PR P+EK+R+D E K++ +YGL+ KRE+WR +  LS IR+ AR+L   L   + N
Sbjct: 9   KKYSTPRHPWEKDRIDEENKILVKYGLKNKREIWRSEAMLSSIRSQARYLRARLRASDAN 68

Query: 190 PRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHAR 369
            ++  E   +++R++RY +L++ +  LD VL+LT EN L RRLQT+ FK  +A S   AR
Sbjct: 69  AQKQLE--RMIKRLSRYKILSD-KATLDDVLSLTVENILDRRLQTIVFKKNLALSEKQAR 125

Query: 370 VLIRQRHIRV-GRQI 411
            LI   HI V GR++
Sbjct: 126 QLITHGHITVNGRRV 140

---

>RS4_METKA (Q8TVC0) 30S ribosomal protein S4P|
          Length = 186

 Score = 97.8 bits (242), Expect = 5e-21
 Identities = 56/133 (42%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           K ++ PR P+E ERL+ E KL+ +YGLR K+ELWR Q  L R R  A+ L+   +   +R
Sbjct: 9   KKYETPRHPWEAERLEYERKLMRKYGLRRKKELWRHQTQLKRWRERAKELMARTDPEAQR 68

Query: 199 IFEGAALLRRMNRYGLLAEGQDK--LDYVLALTAENFLARRLQTLXFKAGMAKSIHHARV 372
             E  AL R++   G+L +  ++  LD +L LT E+ L RRLQT+ ++ G+AK+   AR 
Sbjct: 69  --EREALFRKLYDLGILDKKPEEATLDDILRLTVEDVLERRLQTIVYRKGLAKTPLQARQ 126

Query: 373 LIRQRHIRVGRQI 411
           L+  RHI +G +I
Sbjct: 127 LVVHRHIAIGDRI 139

---

>RS4_METJA (P54020) 30S ribosomal protein S4P|
          Length = 187

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 52/135 (38%), Positives = 80/135 (59%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 186
           R + KT++ P  P+ KER++ E +L  +YGLR KRE+W+ +  L + R  AR L++  ++
Sbjct: 6   RRFKKTYETPNHPWIKERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLIS--DR 63

Query: 187 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHA 366
             +   E   L   + +YG+L      LD VL+LT E+ L RRLQTL F+ G+A++   A
Sbjct: 64  TEQGAKEAVQLFNVLKKYGILKIENPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQA 123

Query: 367 RVLIRQRHIRVGRQI 411
           R LI   HI V  ++
Sbjct: 124 RQLIVHGHIAVNGRV 138

---

>RS4_AERPE (Q9YB58) 30S ribosomal protein S4P|
          Length = 171

 Score = 94.0 bits (232), Expect = 8e-20
 Identities = 53/132 (40%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           K ++ P+ P+ KERL+ E +L+G YGLR K+ELW+ +    R R+ AR LL L  +  R 
Sbjct: 9   KKWEGPKHPWIKERLERERELMGRYGLRNKKELWKAETLARRFRHRARSLLGLPPEVRRE 68

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
                 L+  + R GL+      +D VL + AE  L RRLQT+ +K G+AK+I+ AR L+
Sbjct: 69  --ASRVLVESLYRMGLIDNPNVDIDEVLGINAEKVLERRLQTIVYKKGLAKTIYQARQLV 126

Query: 379 RQRHIRV-GRQI 411
              HI + GR++
Sbjct: 127 VHGHIAIAGRRV 138

---

>RS4_SULAC (P39467) 30S ribosomal protein S4P|
          Length = 176

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 55/138 (39%), Positives = 82/138 (59%), Gaps = 3/138 (2%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLD-- 180
           R   K +  P  P+ K  L  E  L+G+YGLR K+E+W  Q  +   R+ AR LL L   
Sbjct: 5   RKSKKKWMGPSHPWIKINLGKEQILIGKYGLRNKKEIWIAQTMIRNFRHQARSLLALPPA 64

Query: 181 EKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIH 360
           E+N R       L++++ R G+L +    LD +L+LT EN+L RRLQT+ +K G+A++I+
Sbjct: 65  ERNIRE----KQLIQKLYRMGILEKDNSTLDDILSLTEENYLERRLQTIVYKKGLARTIY 120

Query: 361 HARVLIRQRHIRV-GRQI 411
            AR LI   HI + GR++
Sbjct: 121 QARQLITHGHIAISGRKV 138

---

>RS4_PYRHO (O59306) 30S ribosomal protein S4P|
          Length = 180

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 57/131 (43%), Positives = 75/131 (57%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           K ++ P  P+ KERLD E  L+ +Y L+ K+ELW+ +  L   R  AR LL    K    
Sbjct: 9   KKYETPPHPWIKERLDRERVLMDKYELKNKKELWKHETQLKNFRRRARRLLAARGKQAE- 67

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
             E   LL R+ R GLL E    LD VL+LT E+ L RRLQT+ +K G+A+++  AR LI
Sbjct: 68  -IEREQLLSRLKRLGLLPEDA-VLDDVLSLTVEDILERRLQTIVYKKGLARTMRQARQLI 125

Query: 379 RQRHIRVGRQI 411
              HI V  QI
Sbjct: 126 VHGHIEVNGQI 136

---

>RS4_PICTO (Q6KZP7) 30S ribosomal protein S4P|
          Length = 183

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHL-LTLDEKNPR 195
           K +  PR P+EK+R+DAE +L+ +YGL+ KRELWR Q  L+  R  AR L   L   +P 
Sbjct: 9   KKYSTPRHPWEKDRIDAERQLLIKYGLKNKRELWRAQTILTNFRTQARTLQAKLRYNDPL 68

Query: 196 RIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVL 375
            I +   L+ +++R  LL E    LD VL+L  E+ L RRL+TL +K  +A ++  AR  
Sbjct: 69  AIKQFQLLIGKLSRLNLLGENA-TLDDVLSLNIEDILERRLETLVYKKNLALTMKQARQF 127

Query: 376 IRQRHIRVGRQI 411
           I   HI+V  ++
Sbjct: 128 ITHGHIKVNDRV 139

---

>RS4_ARCFU (O28000) 30S ribosomal protein S4P|
          Length = 172

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 53/140 (37%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLT---- 174
           + + K +  P  P++K RL+ E++LV +YGLR KRELWR Q  L + R  AR LL     
Sbjct: 5   KRHRKKYTTPTHPWDKARLEKEMQLVIKYGLRNKRELWRFQNILRKYRRVARDLLAEIGL 64

Query: 175 LDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKS 354
             ++      +   +++++N+ G+L E    LD +L L+ E+FL RRLQT+ ++ G+A++
Sbjct: 65  PGKEGEIAKAKAQTVIKKLNKMGILPENA-TLDDILNLSVEDFLERRLQTMVYRQGLART 123

Query: 355 IHHARVLIRQRHIRV-GRQI 411
           I  AR  I   HI V GR++
Sbjct: 124 IKQARQFITHGHIAVDGRRV 143

---

>RS4_PYRFU (P61993) 30S ribosomal protein S4P|
          Length = 180

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 57/131 (43%), Positives = 75/131 (57%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           K ++ P  P+ KERLD E  L+ +Y L+ K+ELW+ +  L   R  AR LL    K    
Sbjct: 9   KKYETPPHPWIKERLDRERVLMDKYELKNKKELWKHETQLKNFRRRARRLLAARGKQAE- 67

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
             E   LL R+ R GLL E    LD VL+LT E+ L RRLQT+ +K G+A+++  AR LI
Sbjct: 68  -IEREQLLARLKRLGLLPEDA-VLDDVLSLTIEDILERRLQTIVYKKGLARTMRQARQLI 125

Query: 379 RQRHIRVGRQI 411
              HI V  QI
Sbjct: 126 VHGHIEVNGQI 136

---

>RS4_PYRAB (P61992) 30S ribosomal protein S4P|
          Length = 180

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 57/131 (43%), Positives = 75/131 (57%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           K ++ P  P+ KERLD E  L+ +Y L+ K+ELW+ +  L   R  AR LL    K    
Sbjct: 9   KKYETPPHPWIKERLDRERVLMDKYELKNKKELWKHETQLKNFRRRARRLLAARGKQAE- 67

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
             E   LL R+ R GLL E    LD VL+LT E+ L RRLQT+ +K G+A+++  AR LI
Sbjct: 68  -IEREQLLARLKRLGLLPEDA-VLDDVLSLTIEDILERRLQTIVYKKGLARTMRQARQLI 125

Query: 379 RQRHIRVGRQI 411
              HI V  QI
Sbjct: 126 VHGHIEVNGQI 136

---

>RS4_SULTO (Q96YV8) 30S ribosomal protein S4P|
          Length = 177

 Score = 91.3 bits (225), Expect = 5e-19
 Identities = 49/128 (38%), Positives = 76/128 (59%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           + ++ P  P+ +  L+ E  L+G+YGLR KRELW  Q  + + R+ AR LL L      R
Sbjct: 9   RKWEGPGHPWIRINLEKEQVLIGKYGLRNKRELWLAQTIIRKFRHQARSLLALPPAE--R 66

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
                 L++++ R G++ +    LD +L L  EN+L RRLQT+ +K G+A++I+ AR LI
Sbjct: 67  STREKQLIQKLYRMGIIEKDNATLDDILGLNEENYLERRLQTIVYKKGLARTIYQARQLI 126

Query: 379 RQRHIRVG 402
              HI +G
Sbjct: 127 VHGHIAIG 134

---

>RS4_PYRKO (Q5JJF2) 30S ribosomal protein S4P|
          Length = 180

 Score = 88.6 bits (218), Expect = 3e-18
 Identities = 55/131 (41%), Positives = 73/131 (55%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           K ++ P  P+ KERLD E  L   Y L+ K+ELWR +  L   R  AR LL    K    
Sbjct: 9   KKYETPSHPWIKERLDRERVLKRNYALKNKKELWRHETQLKEFRRRARRLLAARGKQAE- 67

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
             E   LL+R+ R GLL      LD VL+LT E+ L RRLQT+ ++ G+A+++  AR LI
Sbjct: 68  -IERQQLLQRLYRLGLLP-ADAVLDDVLSLTVEDVLERRLQTIVYRKGLARTMKQARQLI 125

Query: 379 RQRHIRVGRQI 411
              HI V  Q+
Sbjct: 126 VHGHIEVNGQV 136

---

>RS4_PYRAE (Q8ZTV1) 30S ribosomal protein S4P|
          Length = 159

 Score = 88.2 bits (217), Expect = 4e-18
 Identities = 52/130 (40%), Positives = 78/130 (60%), Gaps = 3/130 (2%)
 Frame = +1

Query: 31  KPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLL--TLDEKNPRRIF 204
           KP++ + K+ L  EL+L+GEYGLR K+ELW  +  L  I   AR LL  T +E+ P  + 
Sbjct: 15  KPKKIWNKQLLLEELQLMGEYGLRNKKELWLARARLKWITRRARSLLSMTAEERAPLEM- 73

Query: 205 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQ 384
                  ++ + G + +   +LD +L+L     L RRLQT+ ++ G+AKSIHHAR LI  
Sbjct: 74  ---PFKEKLYKMGFIEDPNVQLDRILSLDVRAILERRLQTIVYRMGLAKSIHHARQLIVH 130

Query: 385 RHIRV-GRQI 411
            H+ V GR++
Sbjct: 131 GHVAVAGRRV 140

---

>RS4_SULSO (P95987) 30S ribosomal protein S4P|
          Length = 181

 Score = 88.2 bits (217), Expect = 4e-18
 Identities = 49/127 (38%), Positives = 76/127 (59%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           K ++ P  P+ KER+  E +L+G+YGLR KRE+W  Q  + + R+ AR LL L      R
Sbjct: 9   KKWETPGHPWIKERIGYEQELLGKYGLRNKREIWIAQSIIRKFRHQARSLLALPP--AER 66

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
                 L+ ++ + GLL +    +D +L+LT ++ L RRLQT+ +K G++ +I+ AR LI
Sbjct: 67  AVREKQLVGKLLKMGLLKKETATVDDILSLTEQDLLERRLQTIVYKKGLSNTIYQARQLI 126

Query: 379 RQRHIRV 399
              HI V
Sbjct: 127 THGHIAV 133

---

>RS4_METBF (Q46GC8) 30S ribosomal protein S4P|
          Length = 216

 Score = 88.2 bits (217), Expect = 4e-18
 Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 6/133 (4%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           K+F+ PR P+++ R+ +E++LV  YGLR KRE+W+    L   R+ AR LL     +  R
Sbjct: 9   KSFETPRHPWQEARMASEVQLVKAYGLRNKREVWKAASTLRMYRSEARRLLASAANSQER 68

Query: 199 IFEG------AALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIH 360
             EG        +L ++ RYG++    D +D +L+L  EN L RRLQT   + G+A+++ 
Sbjct: 69  GLEGHQKTQSEEILAKLIRYGIIKSDAD-IDDILSLKTENILERRLQTQVLRLGLARTVV 127

Query: 361 HARVLIRQRHIRV 399
            AR  I   HI +
Sbjct: 128 QARQFITHGHIAI 140

---

>RS4_METTH (O26142) 30S ribosomal protein S4P|
          Length = 171

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 53/136 (38%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 186
           R   K +  P  P+  ER+  E +LV +YGL+ K+E+W+ +  + R R  AR+LL +  +
Sbjct: 5   RKARKKYDTPPHPWNAERIKEENRLVAKYGLKNKKEVWKAETMVRRYRRDARYLLGMASE 64

Query: 187 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHA 366
           +  +  E   LL  + R G+L EG  KL+ VL LT E+ L RRLQTL  K G+A+++  A
Sbjct: 65  HTGK--EREQLLGHLVRTGILNEGA-KLEDVLDLTVEDVLRRRLQTLVHKRGLARTVKEA 121

Query: 367 RVLIRQRHIRV-GRQI 411
           R ++   HI + GR+I
Sbjct: 122 RQMVIHGHIALDGRKI 137

---

>RS4_HALMA (Q00862) 30S ribosomal protein S4P (HmaS4)|
          Length = 171

 Score = 84.7 bits (208), Expect = 5e-17
 Identities = 51/125 (40%), Positives = 69/125 (55%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           K ++ P  P++ ER+  E  L+G YGL+ K ELWR Q  L   R  AR LL    ++   
Sbjct: 8   KFYETPNHPFQGERIADEANLIGRYGLKNKEELWRAQSELRGYRREARKLLGSAGEHET- 66

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
             E    L R+ RYG+L E QD+LD VL+L   + L RRLQT+ ++ G A +   AR  I
Sbjct: 67  --ESEEFLARLKRYGILNE-QDQLDDVLSLDVTDVLERRLQTVVYRKGYANTPEQARQFI 123

Query: 379 RQRHI 393
              HI
Sbjct: 124 VHGHI 128

---

>RS4_METMP (Q6LXN0) 30S ribosomal protein S4P|
          Length = 178

 Score = 84.3 bits (207), Expect = 6e-17
 Identities = 48/131 (36%), Positives = 72/131 (54%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 186
           R  GK +  P  P+  ER+  E ++  +YGL  K+ELW+++  L   R  AR L++  + 
Sbjct: 5   RRLGKKYDTPNHPWIGERIQKEKEISQKYGLVNKKELWKMETQLRNYRRQARKLIS--DT 62

Query: 187 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHA 366
             +   E   L   + RY +L E +  LD+VL+L  E+ L RRLQT+ F+ G+AK+   A
Sbjct: 63  TTQGGKEAVQLFNVLKRYAILIEEEPTLDHVLSLNIESILERRLQTIVFRKGLAKTPKQA 122

Query: 367 RVLIRQRHIRV 399
           R  I   HI V
Sbjct: 123 RQFIVHGHIAV 133

---

>RS4_HALSA (Q9HQJ6) 30S ribosomal protein S4P|
          Length = 170

 Score = 81.3 bits (199), Expect = 5e-16
 Identities = 46/127 (36%), Positives = 69/127 (54%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           K ++ P  PY+ ER+  E  L+  YGL+ K ELWR Q  L   R  AR LL         
Sbjct: 9   KFYETPNHPYQGERIAEESDLLSRYGLKNKEELWRAQSELRDYRREARRLL-----GQTG 63

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
              G   + R+ R G+L+E +++LD VL+L   + L RRLQT+ ++ G+A ++  AR  +
Sbjct: 64  TVSGEEFVARLQRIGILSE-EERLDDVLSLEVTDVLERRLQTVVYREGLANTMGQARQFV 122

Query: 379 RQRHIRV 399
              H+ V
Sbjct: 123 SHGHVTV 129

---

>RS4_METMA (Q8PV18) 30S ribosomal protein S4P|
          Length = 219

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 7/134 (5%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTL------- 177
           K+++ PR P+++ R+ AE++LV  YGLR K+E+W+    L   R+ AR LL         
Sbjct: 9   KSYETPRHPWQEARMAAEVQLVKAYGLRNKKEVWKAASMLRMYRSEARKLLAQVASGGQE 68

Query: 178 DEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSI 357
            E       +   +L ++ RYG++ +    +D +L+L  EN L RRLQT   + G+A+++
Sbjct: 69  GELEGHYATQSEEILSKLIRYGII-KADANVDDILSLKTENILERRLQTQVLRLGLARTV 127

Query: 358 HHARVLIRQRHIRV 399
             AR  I   HI +
Sbjct: 128 IQARQFITHGHIAI 141

---

>RS4_METAC (Q8TRR1) 30S ribosomal protein S4P|
          Length = 218

 Score = 78.2 bits (191), Expect = 4e-15
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           K+++ P+ P+++ R+  E++LV  YGLR K+E+W+    L   R+ AR LL         
Sbjct: 9   KSYETPKHPWQEARMATEVQLVKAYGLRNKKEVWKAASMLRMYRSEARKLLAHVASGQEG 68

Query: 199 IFEG------AALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIH 360
             EG        +L ++ RYG++ +    +D +L+L  EN L RRLQT   + G+A+++ 
Sbjct: 69  GLEGHYRTQSEEILSKLIRYGII-KSDANIDDILSLKTENILERRLQTQVLRLGLARTVI 127

Query: 361 HARVLIRQRHIRV 399
            AR  I   HI +
Sbjct: 128 QARQFITHGHIAI 140

---

>RS4_NANEQ (Q74NF7) 30S ribosomal protein S4P|
          Length = 180

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 46/131 (35%), Positives = 73/131 (55%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           + ++ P  P++K+RL  E +L+ EYGL+ KRELW  +    + R  AR+L          
Sbjct: 6   RKWEGPSHPWQKQRLIIEKRLMKEYGLKNKRELWIAETIARKWRAYARYLNAKQAAGQDI 65

Query: 199 IFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
             E    L ++ + G+L+E  + LD VL LT ++ L RRLQT+  + G+AK++  AR  I
Sbjct: 66  SEEKERFLTKLKKLGVLSENAE-LDDVLDLTVKDVLERRLQTMLVRKGLAKTMKQARQFI 124

Query: 379 RQRHIRVGRQI 411
              HI V  ++
Sbjct: 125 VHGHIMVNGEV 135

---

>RS4_NATPD (Q3IQT8) 30S ribosomal protein S4P|
          Length = 174

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
 Frame = +1

Query: 19  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRR 198
           K ++ P  P++ ER+  E  L+  YGL  K ELWR Q  L   R  AR L+   + +   
Sbjct: 8   KFYETPNHPFQGERIAEEGDLLSRYGLVNKEELWRAQSELRDYRREARRLIGEAQGDTVA 67

Query: 199 IFE-GAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVL 375
             E G+  L R+ R G+L + +D LD +L+L   + L RRLQT+ ++ G+  +   AR  
Sbjct: 68  AAEAGSEFLARLKRIGVL-DDEDSLDDILSLDVTDILERRLQTVAYRKGLGNTPQQARQF 126

Query: 376 IRQRHIRV 399
           I   H+ V
Sbjct: 127 IAHGHVTV 134

---

>IMP3_MOUSE (Q921Y2) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 184

 Score = 60.5 bits (145), Expect = 9e-10
 Identities = 37/114 (32%), Positives = 60/114 (52%)
 Frame = +1

Query: 70  ELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLL 249
           EL+++  Y L+ + E  R       +R  AR L  L E++P R+   AALL ++   GL+
Sbjct: 30  ELRVLRRYRLQRREEYTRYNQLSRAVRELARRLRDLPERDPFRVRASAALLDKLYAMGLV 89

Query: 250 AEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
              +  L+   +++A +F  RRL TL  K  MA+ +  A   + Q H+RVG  +
Sbjct: 90  PT-RGSLELCDSVSASSFCRRRLPTLLLKLRMAQHLQAAVAFVEQGHVRVGPDV 142

---

>IMP3_BOVIN (Q3T0M3) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 184

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
 Frame = +1

Query: 70  ELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLL 249
           EL+++  Y L+ + +  R       +R  AR L  L E++P R+   AALL ++   GL+
Sbjct: 30  ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDPFRVRSSAALLDKLYALGLV 89

Query: 250 AE--GQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
                Q+  D+V   TA +F  RRL T+  K  MA+ +  A   + Q H+RVG  +
Sbjct: 90  PTRGSQELCDFV---TASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDV 142

---

>IMP3_HUMAN (Q9NV31) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3) (BRMS2)
          Length = 184

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 35/114 (30%), Positives = 58/114 (50%)
 Frame = +1

Query: 70  ELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLL 249
           EL+++  Y L+ + +  R       +R  AR L  L E++  R+   AALL ++   GL+
Sbjct: 30  ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89

Query: 250 AEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
              +  L+    +TA +F  RRL T+  K  MA+ +  A   + Q H+RVG  +
Sbjct: 90  PT-RGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDV 142

---

>RS9_TOBAC (P49214) 40S ribosomal protein S9 (S4) (Fragment)|
          Length = 77

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 20/22 (90%), Positives = 22/22 (100%)
 Frame = +1

Query: 346 AKSIHHARVLIRQRHIRVGRQI 411
           AKS+HHARVLIRQRHIRVGRQ+
Sbjct: 1   AKSVHHARVLIRQRHIRVGRQV 22

---

>IMP3_SCHPO (O13835) U3 small nucleolar ribonucleoprotein protein imp3 (U3|
           snoRNP protein imp3)
          Length = 183

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 27/114 (23%), Positives = 46/114 (40%)
 Frame = +1

Query: 70  ELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLL 249
           ++ ++  Y +  + E  +      + R  A  L  LD  +P R+     LL ++   G+L
Sbjct: 29  DVMVMRRYHISKREEYQKYNIICGKFRQLAHRLSLLDPTDPFRLQYENLLLEKLFDMGIL 88

Query: 250 AEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
                  D            RRL  +  K  M++ +  A  LI Q H+RVG  +
Sbjct: 89  PSKSKMSDIENKANVSAICRRRLPVIMCKLRMSQVVSEATRLIEQGHVRVGPHV 142

---

>YS4L_CAEEL (O01513) Putative 40S ribosomal protein S4-like|
          Length = 183

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
 Frame = +1

Query: 106 KRELWRVQYALS-RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVL 282
           KRE + +   L+ + R  A  +  L E +P R      +L +    GL+    D L+ + 
Sbjct: 40  KREHYALYNTLAAKSREVADLIKNLSESDPFRSKCTEDMLTKFYAAGLVPTS-DTLERIG 98

Query: 283 ALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
            +T  +F  RRL  +    GM +S+  A  L+ Q H+R+G ++
Sbjct: 99  KVTGASFARRRLPVVMRNIGMCESVKTASDLVEQGHVRIGTKL 141

---

>RS4_PELCD (Q3A6M1) 30S ribosomal protein S4|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
 Frame = +1

Query: 223 RRMNR-YGLLAEGQ----DKLDYVLALTAENFLA---RRLQTLXFKAGMAKSIHHARVLI 378
           +RM R YGLL +      DK D +  +T EN L    RRL +  ++ G A S    R L+
Sbjct: 61  QRMKRTYGLLEKQFRAYFDKADSMKGVTGENLLVLLERRLDSAVYRLGFASSRTEGRALV 120

Query: 379 RQRHIRV-GRQI 411
           RQ H  V GR++
Sbjct: 121 RQGHFLVNGRKV 132

---

>IMP3_YEAST (P32899) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 183

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 27/119 (22%), Positives = 51/119 (42%)
 Frame = +1

Query: 46  YEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLR 225
           +++++   + +++  Y ++ + +  +       IR  A  L  L   +P R      LL 
Sbjct: 21  WKQDQGHRDTQVMRTYHIQNREDYHKYNRICGDIRRLANKLSLLPPTDPFRRKHEQLLLD 80

Query: 226 RMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRVG 402
           ++   G+L       D    +T      RRL  +  +  MA++I  A   I Q H+RVG
Sbjct: 81  KLYAMGVLTTKSKISDLENKVTVSAICRRRLPVIMHRLKMAETIQDAVKFIEQGHVRVG 139

---

>RR4_OENHO (Q9MTP1) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 24/87 (27%), Positives = 39/87 (44%)
 Frame = +1

Query: 151 NAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLX 330
           N +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + 
Sbjct: 40  NKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGPTGQVLL----QLLEMRLDNIL 95

Query: 331 FKAGMAKSIHHARVLIRQRHIRVGRQI 411
           F+ GMA +I  AR L+  RHI V  +I
Sbjct: 96  FRLGMASTIPQARQLVNHRHILVNGRI 122

---

>RR4_LOTJA (Q9BBT5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 38/135 (28%), Positives = 52/135 (38%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 186
           R  G  FKK RR      L ++   VG       R   + QY   RIR        L+EK
Sbjct: 3   RYRGPRFKKIRRLGALPGLTSKRPTVGSELRNQSRSTKKSQY---RIR--------LEEK 51

Query: 187 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHA 366
              R   G    + +    +  + +     VL       L  RL  + F+ GMA +I  A
Sbjct: 52  QKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRLDNILFRLGMASTIPQA 107

Query: 367 RVLIRQRHIRVGRQI 411
           R L+  RH+ V   I
Sbjct: 108 RQLVNHRHVFVNGHI 122

---

>RR4_WATAN (O20399) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 23/85 (27%), Positives = 39/85 (45%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G   L+ +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTELQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_DENGI (P36454) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 24/84 (28%), Positives = 37/84 (44%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V R+I
Sbjct: 99  GMASTIPEARQLVNHRHILVNRRI 122

---

>RR4_SOYBN (Q2PMU5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 25/91 (27%), Positives = 39/91 (42%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSSKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR LI  RH+ V   I
Sbjct: 92  DNILFRLGMAATIPQARQLINHRHVLVNGHI 122

---

>RR4_CUCSA (Q4VZH3) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 25/91 (27%), Positives = 39/91 (42%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V   I
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHILVNGSI 122

---

>RR4_DIERO (O20210) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 25/91 (27%), Positives = 40/91 (43%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 29  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGLVLL----QLLEMRL 84

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V  +I
Sbjct: 85  DNILFRLGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_DIEGR (O20208) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 25/91 (27%), Positives = 40/91 (43%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 29  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGLVLL----QLLEMRL 84

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V  +I
Sbjct: 85  DNILFRLGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_BRYCA (P59135) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 24/88 (27%), Positives = 40/88 (45%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRVGRQI 411
            F+ GMA +I  AR L+  RHI V  +I
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDRI 123

---

>RR4_CALFE (Q7YJX0) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 25/91 (27%), Positives = 40/91 (43%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V  +I
Sbjct: 92  DNILFRLGMASTIPGARQLVNHRHILVNGRI 122

---

>RT04_RECAM (O21263) Mitochondrial ribosomal protein S4|
          Length = 249

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 304 LARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
           L RRL  + ++AG   SI+ AR+L+  +H+ V  +I
Sbjct: 131 LERRLDIIIYRAGFVNSIYQARLLVNHKHVLVNNKI 166

---

>RR4_SPLSP (Q9FS90) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 23/88 (26%), Positives = 38/88 (43%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +    +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARHAKGSTGEILL----QLLEMRLDNI 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRVGRQI 411
            F+ GMA +I  AR L+  RHI V   I
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNEHI 123

---

>RS4A_SYMTH (Q67JX0) 30S ribosomal protein S4 A|
          Length = 207

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
 Frame = +1

Query: 58  RLDAELKLVGE--YGLRC---KRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALL 222
           R   +L L GE  Y  +C   KR     Q+  SR R    + + L EK   R + G  L 
Sbjct: 14  REGVKLYLKGEKCYSDKCPIVKRATPPGQHGASR-RKPTEYAIQLREKQKARRYYGV-LE 71

Query: 223 RRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRV- 399
           R+  RY  +A  +  +   + L     L RRL  + ++ G A S   AR +++  HI V 
Sbjct: 72  RQFERYFEMASRKKGVTGEVLLQT---LERRLDNVVYRMGFAASRAEARQIVKHSHIEVN 128

Query: 400 GRQI 411
           GR++
Sbjct: 129 GRKV 132

---

>RR4_TOBAC (P06359) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 25/91 (27%), Positives = 40/91 (43%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V  +I
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRI 122

---

>RR4_PANGI (Q68S04) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 25/91 (27%), Positives = 40/91 (43%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V  +I
Sbjct: 92  DNILFRLGMAPTIPGARQLVNHRHILVNGRI 122

---

>RR4_NICTO (Q33C33) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 25/91 (27%), Positives = 40/91 (43%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V  +I
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRI 122

---

>RR4_NICSY (Q3C1H5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 25/91 (27%), Positives = 40/91 (43%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V  +I
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRI 122

---

>RR4_LACSA (Q332X6) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 25/91 (27%), Positives = 40/91 (43%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V  +I
Sbjct: 92  DNILFRLGMAPTIPGARQLVNHRHILVNGRI 122

---

>RR4_FUNHY (Q9SMG1) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 23/87 (26%), Positives = 39/87 (44%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           S  +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL
Sbjct: 36  SAAKKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRV 399
             + F+ GMA +I  AR L+  RH+ V
Sbjct: 92  DNIVFRLGMAPTIPGARQLVNHRHVLV 118

---

>RR4_EUCGG (Q49KZ6) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 24/87 (27%), Positives = 38/87 (43%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRV 399
             + F+ GMA +I  AR L+  RHI V
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHILV 118

---

>RR4_ATRBE (Q8S8X2) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 25/91 (27%), Positives = 40/91 (43%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V  +I
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRI 122

---

>RS4_DESPS (Q6AP44) 30S ribosomal protein S4|
          Length = 210

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRC---KRELWRVQYALSRIRNAARHLLTL 177
           RN G   ++ RR    E L   LK    Y  +C   +R     Q+  +R +  + + + L
Sbjct: 3   RNIGAVCRRCRR----ENLKLFLKGDRCYSDKCSFERRAFAPGQHGQARFKKVSDYAVQL 58

Query: 178 DEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLA-----LTAENFLA---RRLQTLXF 333
            EK   +           + YG+L E Q +L +  A     +  EN L    RRL    F
Sbjct: 59  REKQKVK-----------SMYGVL-EAQFRLTFEKAEAQKGVAGENLLILLERRLDNAVF 106

Query: 334 KAGMAKSIHHARVLIRQRHIRV 399
           +AG A S   AR ++R +HI +
Sbjct: 107 RAGFASSRTQARQIVRHKHILI 128

---

>RR4_YUCFI (P69679) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 39/135 (28%), Positives = 53/135 (39%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 186
           R  G  FKK RR      L ++    G       R + R QY   RIR        L+EK
Sbjct: 3   RYRGPRFKKIRRLGTLPGLTSKRPRSGSDLKNPLRSVKRSQY---RIR--------LEEK 51

Query: 187 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHA 366
              R   G    + +    +  + +     VL       L  RL  + F+ GMA +I  A
Sbjct: 52  QKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFRLGMASTIPGA 107

Query: 367 RVLIRQRHIRVGRQI 411
           R L+  RHI V  +I
Sbjct: 108 RQLVNHRHILVNGRI 122

---

>RR4_AGABR (P69629) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 39/135 (28%), Positives = 53/135 (39%)
 Frame = +1

Query: 7   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEK 186
           R  G  FKK RR      L ++    G       R + R QY   RIR        L+EK
Sbjct: 3   RYRGPRFKKIRRLGTLPGLTSKRPRSGSDLKNPLRSVKRSQY---RIR--------LEEK 51

Query: 187 NPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHA 366
              R   G    + +    +  + +     VL       L  RL  + F+ GMA +I  A
Sbjct: 52  QKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFRLGMASTIPGA 107

Query: 367 RVLIRQRHIRVGRQI 411
           R L+  RHI V  +I
Sbjct: 108 RQLVNHRHILVNGRI 122

---

>RR4_OROMI (O78678) Plastid 30S ribosomal protein S4|
          Length = 203

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 24/91 (26%), Positives = 40/91 (43%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRFVKKSQYRIRLEEKQKLRFHYGLTERQLLKYIRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RH+ V  +I
Sbjct: 92  DNILFRLGMALTIPAARQLVNHRHVLVNGRI 122

---

>RR4_SPIOL (P13788) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 25/91 (27%), Positives = 40/91 (43%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKRSQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V  +I
Sbjct: 92  DNILFRLGMAPTIPGARQLVNHRHILVNGRI 122

---

>RR4_SOLTU (Q2VEH5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 25/91 (27%), Positives = 39/91 (42%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V   I
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGHI 122

---

>RR4_SOLBU (Q2MII5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 25/91 (27%), Positives = 39/91 (42%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V   I
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGHI 122

---

>RR4_PHYPA (Q6YXP3) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 22/87 (25%), Positives = 39/87 (44%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           S  +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL
Sbjct: 36  STAKKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGQILL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRV 399
             + F+ GMA +I  AR L+  RH+ V
Sbjct: 92  DNIVFRLGMAPTIPGARQLVNHRHVLV 118

---

>RR4_PHAAO (Q3BAN8) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 24/90 (26%), Positives = 39/90 (43%)
 Frame = +1

Query: 142 RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQ 321
           R    +++ + L+EK   R   G    + +    +  + +     VL       L  RL 
Sbjct: 37  RFGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLD 92

Query: 322 TLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
            + F+ GMA +I  AR L+  RHI V  +I
Sbjct: 93  NILFRLGMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_LYCES (Q2MI98) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 25/91 (27%), Positives = 39/91 (42%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V   I
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGHI 122

---

>RR4_GOSHI (Q2L908) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRPGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRV-GRQI 411
             + F+ GMA +I  AR L+  RHI V GR +
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHILVNGRTV 123

---

>RR4_AMBTC (Q70Y01) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 34.7 bits (78), Expect = 0.055
 Identities = 24/91 (26%), Positives = 40/91 (43%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
             + F+ GMA +I  AR L+  RHI V  ++
Sbjct: 92  DNILFRLGMASTIPGARQLVNHRHILVNGRL 122

---

>RR4_RHAHU (P36470) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 34.3 bits (77), Expect = 0.072
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLVRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 98  LGMASTIPRARQLVNHRHILVNGRI 122

---

>RR4_LEUSC (P59146) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 34.3 bits (77), Expect = 0.072
 Identities = 23/84 (27%), Positives = 38/84 (45%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ GMA +I  AR L+  RHI V
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILV 119

---

>RR4_HYPCP (P59142) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 34.3 bits (77), Expect = 0.072
 Identities = 23/84 (27%), Positives = 38/84 (45%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ GMA +I  AR L+  RHI V
Sbjct: 96  TFRLGMAPTIPGARQLVNHRHILV 119

---

>RR4_HUPLU (Q5SD08) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 34.3 bits (77), Expect = 0.072
 Identities = 22/87 (25%), Positives = 38/87 (43%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G A  + +    +    +     VL       L  RL  +
Sbjct: 40  KKVSQYCIRLEEKQKLRFHHGLAEQQLLKYVRIARRAKGSTGQVLL----QLLEMRLDNI 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRVGRQ 408
            F+ GMA +I  AR L+  +HI V  +
Sbjct: 96  IFRLGMAPTIPGARQLVNHKHILVNNR 122

---

>RR4_HOOLU (P59139) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 34.3 bits (77), Expect = 0.072
 Identities = 23/84 (27%), Positives = 38/84 (45%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ GMA +I  AR L+  RHI V
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHIGV 119

---

>RR4_TIGSP (O36057) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_SISST (P69652) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_SISSP (P69651) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_NEOSP (O36051) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_LIBFO (O20254) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_ISOTA (O20236) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_IRILU (O20235) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_CYPSP (O20106) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHMAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_ALOVE (O19986) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_IRIPA (P36461) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_ASPSB (O47026) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_SPHDO (Q9FSA4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 24/88 (27%), Positives = 39/88 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +    +     VL   +E     RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARRAKGSTGEVLLQLSE----MRLDNV 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRVGRQI 411
            F+ GMA +I  AR L+  RHI V   I
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYI 123

---

>RR4_HYPAR (P59141) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/84 (27%), Positives = 38/84 (45%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ GMA +I  AR L+  RHI V
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILV 119

---

>RR4_HYLSP (P59140) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 24/88 (27%), Positives = 38/88 (43%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +    +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARRAKGSTGEVLL----QLLEMRLDNV 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRVGRQI 411
            F+ GMA +I  AR L+  RHI V   I
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYI 123

---

>RS4_BACHD (Q9K7Z8) 30S ribosomal protein S4|
          Length = 200

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
 Frame = +1

Query: 16  GKTFKKPRRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNP 192
           GK  +K  RPY   +    + K + EYGL+ +             +   RH+  ++E+  
Sbjct: 23  GKELQK--RPYAPGQHGPNQRKKLSEYGLQLQE------------KQKLRHMYGVNERQF 68

Query: 193 RRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTLXFKAGMAKSIHH 363
           RRIF  A  +                     +  ENF   L  RL  L ++ G+A++   
Sbjct: 69  RRIFNDAGKM-------------------AGIHGENFMILLESRLDNLVYRMGLARTRRA 109

Query: 364 ARVLIRQRHIRVGRQ 408
           AR L+   HI V  Q
Sbjct: 110 ARQLVNHGHITVDGQ 124

---

>RR4_ORYSA (P12147) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPEARQLVNHRHILVNGRI 122

---

>RR4_ORYNI (Q6ENH2) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPEARQLVNHRHILVNGRI 122

---

>RR4_SPASP (O36054) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_MICJU (P69647) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_LAPNE (O20255) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_GLACO (P69643) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_FRESP (O20215) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_CROSP (O20103) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_CRONU (P69639) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_BABST (O19995) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_ARIPL (P69633) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNDRI 115

---

>RR4_ARICA (P69632) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNDRI 115

---

>RR4_TRISA (O20291) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGRVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_MORST (O20264) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRI 115

---

>RR4_FURGI (O20213) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRI 115

---

>RR4_BOBGL (O19992) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRI 115

---

>RR4_NERBO (O20265) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_HYMLI (O20230) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVQIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_HEAMA (O20231) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_NAROD (O47029) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_DIPFO (Q9M4B9) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 23/88 (26%), Positives = 39/88 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRVGRQI 411
            F+ GMA +I  AR L+  RHI V  +I
Sbjct: 96  LFRLGMAPTIPGARQLVNHRHILVNDRI 123

---

>RR4_CATCI (P59137) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 23/88 (26%), Positives = 39/88 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRVGRQI 411
            F+ GM+ +I  AR L+  RHI V   I
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILVNGYI 123

---

>RR4_GLAPA (O20221) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 197

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_PILTE (O20278) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_GLAMU (O20219) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_ACOCL (Q3V532) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 98  LGMAPTIPGARQLVNHRHILVNGRI 122

---

>RR4_IRIEN (O20234) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 23/85 (27%), Positives = 37/85 (43%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGRVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V   I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGHI 115

---

>RR4_BELCH (O19990) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 23/85 (27%), Positives = 37/85 (43%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGRVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V   I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGHI 115

---

>RR4_TRARA (P36473) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 27/84 (32%), Positives = 39/84 (46%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    R++ RY  +A    K    + L     L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKKSTGQVLL---QLLEMRLDNIVFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_MELUN (P36466) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 28/84 (33%), Positives = 40/84 (47%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVYIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_MELAL (P36465) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 28/84 (33%), Positives = 40/84 (47%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVYIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_ELEIN (P36456) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 27/84 (32%), Positives = 39/84 (46%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    R++ RY  +A    K    + L     L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKKSTGQVLL---QLLEMRLDNIVFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_CANTA (P59136) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 22/88 (25%), Positives = 39/88 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNV 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRVGRQI 411
            F+ GM+ +I  AR L+  RHI V   I
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILVNGHI 123

---

>RS4_STAS1 (Q49YF2) 30S ribosomal protein S4|
          Length = 200

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 6/134 (4%)
 Frame = +1

Query: 16  GKTFKKPRR-----PYEKERLDAELKLVGEYGLRCKRELWRVQYALS-RIRNAARHLLTL 177
           G  +KK RR         + L+      G++G   +++L   +YAL  R +   R+L  +
Sbjct: 6   GSNWKKSRRLGISLSGTGKELEKRPYAPGQHGPNQRKKL--SEYALQLREKQKLRYLYGM 63

Query: 178 DEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSI 357
            E+  R  FE A      N++G+  E   +L           LA RL  + +  G+A++ 
Sbjct: 64  TERQFRNTFEIAG-----NQHGVHGENFMQL-----------LAARLDAVVYSLGLARTR 107

Query: 358 HHARVLIRQRHIRV 399
             AR ++   HI V
Sbjct: 108 RQARQIVNHGHIEV 121

---

>RR4_PELNE (Q9FSD9) Chloroplast 30S ribosomal protein S4|
          Length = 200

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 20/84 (23%), Positives = 39/84 (46%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +    +  + +     +L+ T E     RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQILSQTLE----MRLDNI 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ GM+ +I  AR L+  RHI +
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILI 119

---

>RR4_PATSQ (O36052) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKVKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_LYGSP (P36464) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 28/84 (33%), Positives = 40/84 (47%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVQIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RS4_STAES (Q8CS54) 30S ribosomal protein S4|
          Length = 200

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 21/80 (26%)
 Frame = +1

Query: 223 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLXFKA 339
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  + +  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSL 101

Query: 340 GMAKSIHHARVLIRQRHIRV 399
           G+A++   AR L+   HI V
Sbjct: 102 GLARTRRQARQLVNHGHIEV 121

---

>RS4_STAEQ (Q5HNI5) 30S ribosomal protein S4|
          Length = 200

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 21/80 (26%)
 Frame = +1

Query: 223 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLXFKA 339
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  + +  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSL 101

Query: 340 GMAKSIHHARVLIRQRHIRV 399
           G+A++   AR L+   HI V
Sbjct: 102 GLARTRRQARQLVNHGHIEV 121

---

>RS4B_NITEU (Q82T00) 30S ribosomal protein S4 B|
          Length = 205

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 289 TAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRV 399
           T    L RRL  + F+AG A ++  AR L+  RH+R+
Sbjct: 87  TLLQLLERRLDNVVFRAGFAPTVIAARQLVSHRHVRL 123

---

>RR4_PINKO (Q85WX8) Chloroplast 30S ribosomal protein S4|
          Length = 228

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 24/87 (27%), Positives = 37/87 (42%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 318
           S  R  +++ + L+EK   R   G    + +    +    +     VL       L  RL
Sbjct: 38  SSSRKISQYRIRLEEKQKLRFHYGLTERQLLKYVRVSRRAKGSTGQVLL----QLLEMRL 93

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRV 399
             + F+ GMA +I  AR L+   HIRV
Sbjct: 94  DNIIFRLGMAPTIPGARQLVNHGHIRV 120

---

>RR4_PATFR (O20273) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 184

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKVKGSTGQVLL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RHI V  +I
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRI 115

---

>RR4_CYAME (O22020) Chloroplast 30S ribosomal protein S4|
          Length = 190

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 23/92 (25%)
 Frame = +1

Query: 205 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLAR----------------------RL 318
           E A   R+++ Y  + +G+ KL Y   +T  N LAR                      RL
Sbjct: 35  EHAHKTRKLSEYAGVLQGEQKLQYYYGIT-NNQLARYFRQAKKSRASTGIELLKMLETRL 93

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRV-GRQI 411
             + ++AG A ++  AR L+   H++V G Q+
Sbjct: 94  DHVVYRAGFAPTLPAARQLVNHGHVKVNGNQV 125

---

>RR4_TRIRO (P69654) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_TRIDA (P69653) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_STICA (P36472) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNIIFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_SETVI (P69650) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_PHYFL (P69649) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_PHLPR (P69648) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_PENVI (P36467) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_LOLPR (P69646) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_LAMAU (P69645) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_HORMA (P69644) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_FESPR (P36459) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_FESGI (P69642) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_ELYCA (P69641) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_DESFL (P69640) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_CINLA (P69638) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_CALEP (P69637) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_BROER (P36451) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_ARUJA (P69634) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_ANDIS (P69631) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_ALOPR (P69630) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RS4_GEOMG (Q39XY0) 30S ribosomal protein S4|
          Length = 208

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +1

Query: 262 DKLDYVLALTAENFLA---RRLQTLXFKAGMAKSIHHARVLIRQRH 390
           ++ D +  +T EN L+   RRL  + ++ G A S   AR+L+R  H
Sbjct: 79  EEADRMRGVTGENLLSLLERRLDNVVYRLGFASSRTEARILVRHNH 124

---

>RR4_RICNA (Q9M4C2) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 21/84 (25%), Positives = 37/84 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ GMA +I  AR L+  RHI +
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILI 119

---

>RR4_MARPO (P06358) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 21/84 (25%), Positives = 37/84 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ GMA +I  AR L+  RHI +
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILI 119

---

>RS4_LACAC (Q5FKX2) 30S ribosomal protein S4|
          Length = 203

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +1

Query: 235 RYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRV 399
           R G + EGQ  +++++       L RRL ++ ++ G+A +   AR L+   HI V
Sbjct: 74  RAGKIREGQHGINFMI------LLERRLDSIVYRLGLATTREQARQLVNHGHITV 122

---

>RR4_WOOUN (P59152) Chloroplast 30S ribosomal protein S4|
          Length = 185

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 304 LARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
           L  RL  + F+ GMA +I  AR L+  RHI V  +I
Sbjct: 70  LEMRLDNVIFRLGMASTIPAARQLVNHRHILVNNRI 105

---

>RR4_WOORA (P59151) Chloroplast 30S ribosomal protein S4|
          Length = 185

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 304 LARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
           L  RL  + F+ GMA +I  AR L+  RHI V  +I
Sbjct: 70  LEMRLDNVIFRLGMASTIPAARQLVNHRHILVNNRI 105

---

>RR4_WHEAT (Q95H61) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_SACOF (Q6ENW1) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_SACHY (Q6L397) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_MAIZE (P02355) Chloroplast 30S ribosomal protein S4 (Basic protein)|
          Length = 201

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RR4_BRASY (P69636) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMAATIPGARQLVNHRHILVNGRI 122

---

>RR4_BRAPI (P69635) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 23/84 (27%), Positives = 36/84 (42%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  + F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMAATIPGARQLVNHRHILVNGRI 122

---

>RS4_CARHZ (Q3A9U3) 30S ribosomal protein S4|
          Length = 208

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLA---RRL 318
           +    + L L EK   +   G  L  +  RY  +AE Q        +T EN L    RRL
Sbjct: 48  KKPTEYALQLREKQKAKRIYGV-LEAQFRRYFEMAERQP------GITGENLLVILERRL 100

Query: 319 QTLXFKAGMAKSIHHARVLIRQRHIRV-GRQI 411
             + ++ G+A+S   AR L+R     V GR++
Sbjct: 101 DNVVYRLGLAESRAQARQLVRHNFFTVNGRKV 132

---

>RR4_PLAAD (Q9FSE4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 20/88 (22%), Positives = 38/88 (43%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G A  + +    +  + +     +L       L  RL   
Sbjct: 40  KKVSQYRIRLEEKQKLRSHYGLAERQLLKYMRIARKAKGSTGQILL----QLLEMRLDNT 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRVGRQI 411
            F+ GM+ +I  AR L+  RHI +   +
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHISINNDV 123

---

>RR4_MONFO (Q9M4C1) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 20/88 (22%), Positives = 38/88 (43%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRVGRQI 411
            F+ GMA ++  AR L+  RHI +   +
Sbjct: 96  LFRLGMALTVPGARQLVNHRHILINNSM 123

---

>RR4_EPIVI (P30056) Plastid 30S ribosomal protein S4|
          Length = 202

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 22/85 (25%), Positives = 38/85 (44%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    +    + +  + +     VL       L  RL  + F+
Sbjct: 42  SQYRIRLEEKQKLRFNYGLRERQLRKYFSIAIKTRGSTGKVLM----QLLEMRLDNIIFR 97

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +I  AR L+  RH+ V  +I
Sbjct: 98  LGMASTIPAARQLVNHRHVLVNGRI 122

---

>RR4_ANTFO (Q85AX4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 21/84 (25%), Positives = 37/84 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           R  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  RKISQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ G+A +I  AR L+  RH+ V
Sbjct: 96  IFRLGLAPTIPGARQLVNHRHVLV 119

---

>RS4_STRCO (Q9KXP5) 30S ribosomal protein S4|
          Length = 204

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +1

Query: 304 LARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQ 408
           L RRL  L  ++G+A++I+ AR ++   HI+V  Q
Sbjct: 90  LERRLDALVLRSGIARTIYQARQMVVHGHIQVNGQ 124

---

>RS4_STRAW (Q827S7) 30S ribosomal protein S4|
          Length = 204

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = +1

Query: 238 YGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQ 408
           Y   A+ Q K    L +  E    RRL  L  ++G+A++I+ AR ++   HI V  Q
Sbjct: 72  YERAAKTQGKTGEALVIELE----RRLDALVLRSGIARTIYQARQMVVHGHIEVNGQ 124

---

>RR4_NECCR (P59149) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 22/84 (26%), Positives = 37/84 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRSDNV 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ GMA +I  AR L+  RHI V
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILV 119

---

>RR4_HAPHO (Q9M4C0) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 20/88 (22%), Positives = 39/88 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGNVLL----QLLEMRLDNV 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRVGRQI 411
            F+ GM+ +I  AR L+  RHI +  ++
Sbjct: 96  IFRLGMSSTIPGARQLVNHRHIMINDEM 123

---

>RR4_ANTPU (Q9FTC7) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 22/84 (26%), Positives = 37/84 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRSDNV 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ GMA +I  AR L+  RHI V
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILV 119

---

>RR4_ANTOD (P36447) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 23/84 (27%), Positives = 35/84 (41%)
 Frame = +1

Query: 160 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKA 339
           ++ + L EK   R   G    + +    +  + +     VL       L  RL    F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNTLFRL 98

Query: 340 GMAKSIHHARVLIRQRHIRVGRQI 411
           GMA +I  AR L+  RHI V  +I
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRI 122

---

>RS4_GEOSL (Q749B2) 30S ribosomal protein S4|
          Length = 208

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 271 DYVLALTAENFLA---RRLQTLXFKAGMAKSIHHARVLIRQRH 390
           D +  +T EN L+   RRL  + ++ G A S   AR+L+R  H
Sbjct: 82  DRLKGVTGENLLSLLERRLDNVVYRLGFAASRTEARILVRHNH 124

---

>RR4_FRUTA (Q9FSU1) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 22/84 (26%), Positives = 37/84 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRPDNV 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ GMA +I  AR L+  RHI V
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILV 119

---

>RR4_FRUDI (Q9FSV6) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 22/84 (26%), Positives = 37/84 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRPDNV 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ GMA +I  AR L+  RHI V
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILV 119

---

>RR4A_CYACA (Q9TLY7) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 298 NFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
           N L  RL  +  +AG+A +I  +R L+  +HI V  +I
Sbjct: 86  NLLEMRLDNIVLRAGLAPTIAASRQLVSHKHIEVNNKI 123

---

>RR4_ADICA (Q85FL8) Chloroplast 30S ribosomal protein S4|
          Length = 197

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 11/102 (10%)
 Frame = +1

Query: 139 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNR----YGLLAEGQDKLDYVLALTAEN-- 300
           S   N     L +D+   R+I +    L    R    YGL      +   +   T  +  
Sbjct: 16  SNTSNLGEFRLAVDQSTSRKISQFCVRLEAKQRLRLNYGLTERQLLRYVRIARRTRGSTG 75

Query: 301 -----FLARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
                 L  RL  + F+ GMA +I  AR L+  RHI V  ++
Sbjct: 76  QVLLQLLEMRLDNIIFQLGMASTIPAARQLVCHRHILVNHRV 117

---

>RS4_BACLD (Q65G42) 30S ribosomal protein S4|
          Length = 200

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 4/132 (3%)
 Frame = +1

Query: 16  GKTFKKPRRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNP 192
           GK  +K  RPY        + K + EYGL+ +             +   RH+  ++E+  
Sbjct: 23  GKELEK--RPYAPGPHGPGQRKKLSEYGLQLQE------------KQKLRHMYGVNERQF 68

Query: 193 RRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTLXFKAGMAKSIHH 363
           R +F+ AA  +   ++G                 ENF   L  RL  + ++ G+A++   
Sbjct: 69  RNLFDKAA--KMAGKHG-----------------ENFMILLESRLDNIVYRLGLARTRRQ 109

Query: 364 ARVLIRQRHIRV 399
           AR L+   H+ V
Sbjct: 110 ARQLVNHGHVLV 121

---

>RR4_PLARP (Q9M4C3) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 20/84 (23%), Positives = 37/84 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ GMA +I  AR L+  +HI +
Sbjct: 96  IFRLGMAPTIPGARQLVNHQHILI 119

---

>RR4_FRUPO (Q9FSV5) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 21/84 (25%), Positives = 37/84 (44%)
 Frame = +1

Query: 148 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 327
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRPDNV 95

Query: 328 XFKAGMAKSIHHARVLIRQRHIRV 399
            F+ GMA ++  AR L+  RHI V
Sbjct: 96  IFRLGMAPTVPGARQLVNHRHILV 119

---

>RR4_EMIHU (Q4G3A4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 25/77 (32%), Positives = 37/77 (48%)
 Frame = +1

Query: 169 LTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMA 348
           + L+EK   R   G +  + MN Y   A+G       + L     L  RL  L F+ G+A
Sbjct: 47  IRLEEKQKLRFNYGISEKQLMN-YIRQAKGIKGTTGTILL---QLLEMRLDNLIFRLGLA 102

Query: 349 KSIHHARVLIRQRHIRV 399
            +I  AR L+  +HI+V
Sbjct: 103 PTIAAARQLVSHKHIQV 119

---

>RR4_ROMRE (O20280) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 21/85 (24%), Positives = 37/85 (43%)
 Frame = +1

Query: 157 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFK 336
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  + F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 337 AGMAKSIHHARVLIRQRHIRVGRQI 411
            GMA +   AR L+  RHI V  +I
Sbjct: 91  LGMASTNPGARQLVNHRHILVNGRI 115

---

>RS4_LEIXX (Q6AFA4) 30S ribosomal protein S4|
          Length = 207

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +1

Query: 286 LTAENF---LARRLQTLXFKAGMAKSIHHARVLIRQRHIRV 399
           LT EN    L  RL  L  +AG A++I  AR  +  RHI V
Sbjct: 82  LTGENLVEILEMRLDALVLRAGFARTISQARQFVVHRHILV 122

---

>RS4_LACPL (Q88UX0) 30S ribosomal protein S4|
          Length = 202

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
 Frame = +1

Query: 175 LDEKNPRRIFEGAALLRRMNRY---GLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGM 345
           L EK   R+  G    +  N +   G + EG+  +++++       L RRL  + ++ G+
Sbjct: 51  LREKQKLRMMYGLTERQFANLFIKAGKIREGKHGVNFMI------LLERRLDNMVYRLGL 104

Query: 346 AKSIHHARVLIRQRHIRV 399
           A +   AR L+   HI V
Sbjct: 105 ATTRRQARQLVNHGHITV 122

---

>RS4_OCEIH (P59130) 30S ribosomal protein S4|
          Length = 200

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +1

Query: 223 RRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLI 378
           R+++ YGL  + + KL ++  L    F     +TL  KAG  K IH    +I
Sbjct: 42  RKLSEYGLQMQEKQKLRFMYGLNERQF-----RTLFDKAGKMKGIHGENFMI 88

---

>RS4_BACFR (Q64NN4) 30S ribosomal protein S4|
          Length = 201

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 29/109 (26%), Positives = 46/109 (42%)
 Frame = +1

Query: 85  GEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 264
           G++G   KR+       L R +  A++   + EK  R +FE AA  + +    LL     
Sbjct: 34  GQHGNSRKRKTSEYGIQL-REKQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL----- 87

Query: 265 KLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
                        L  RL  + F+ G+A +   AR L+  +HI V  Q+
Sbjct: 88  -----------QMLEGRLDNIVFRLGIAPTRAAARQLVGHKHITVDGQV 125

---

>RS4_BACFN (Q5L8D5) 30S ribosomal protein S4|
          Length = 201

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 29/109 (26%), Positives = 46/109 (42%)
 Frame = +1

Query: 85  GEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 264
           G++G   KR+       L R +  A++   + EK  R +FE AA  + +    LL     
Sbjct: 34  GQHGNSRKRKTSEYGIQL-REKQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL----- 87

Query: 265 KLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
                        L  RL  + F+ G+A +   AR L+  +HI V  Q+
Sbjct: 88  -----------QMLEGRLDNIVFRLGIAPTRAAARQLVGHKHITVDGQV 125

---

>RS4_THETN (Q8R7Y1) 30S ribosomal protein S4|
          Length = 206

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
 Frame = +1

Query: 223 RRMNRYGLLAEGQ-----DKLDYVLALTAENFLA---RRLQTLXFKAGMAKSIHHARVLI 378
           +++ RY  + E Q     ++ + +  +T EN L    RRL  + ++ G A S   AR L+
Sbjct: 61  QKLKRYYGILERQFVRYYERAERMRGITGENLLQLLERRLDNVVYRLGFAVSRAQARQLV 120

Query: 379 RQRHIRV 399
              HI V
Sbjct: 121 SHGHIEV 127

---

>RS4_NITWN (Q3ST14) 30S ribosomal protein S4|
          Length = 205

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
 Frame = +1

Query: 238 YGLLAEGQDKLDYVLAL-----TAENF---LARRLQTLXFKAGMAKSIHHARVLIRQRHI 393
           YG ++E Q    YV A      + EN    L RRL T+ ++A    +I  AR  I   H+
Sbjct: 62  YGNISERQFYAIYVEATRMKGDSGENLIGLLERRLDTVVYRAKFVPTIFAARQFINHGHV 121

Query: 394 RV-GRQI 411
           +V GR++
Sbjct: 122 KVNGRRV 128

---

>LMNA_CHICK (P13648) Lamin-A|
          Length = 657

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 30/88 (34%), Positives = 41/88 (46%)
 Frame = +1

Query: 55  ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMN 234
           + L AEL  + +     + +L  V+ ALSR R   R LL   E+      E A +  RM 
Sbjct: 299 DSLSAELSQLQKQLAAKEAKLREVEEALSREREGGRRLLAEKER------EMAEMRARMQ 352

Query: 235 RYGLLAEGQDKLDYVLALTAENFLARRL 318
           +   L E Q+ LD  LAL  E    R+L
Sbjct: 353 QQ--LDEYQELLDIKLALDMEINAYRKL 378

---

>RS4_ZYMMO (Q9Z5U7) 30S ribosomal protein S4|
          Length = 204

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 25/105 (23%), Positives = 43/105 (40%)
 Frame = +1

Query: 85  GEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 264
           G++G R + ++      L   +    +   + EK  RR ++ A+ L+      L+     
Sbjct: 35  GQHGQRRRSKISDYGLQLKAKQKLKGYYGDVTEKQFRRSYDDASKLKGDTSQNLIG---- 90

Query: 265 KLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRV 399
                        L RRL  + ++A  A +I  AR L+   HIRV
Sbjct: 91  ------------ILERRLDMIVYRAKFAPTIFAARQLVSHGHIRV 123

---

>RS4_PELUB (Q4FLJ0) 30S ribosomal protein S4|
          Length = 205

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
 Frame = +1

Query: 238 YGLLAEGQDKLDYVLAL-----TAENF---LARRLQTLXFKAGMAKSIHHARVLIRQRHI 393
           YG + E Q +  Y  A      T EN    L RRL ++ ++A  + ++  AR LI   H+
Sbjct: 62  YGNINERQFRNIYKKATMLKGDTGENLIGLLERRLDSVVYRARFSTTVFSARQLINHGHV 121

Query: 394 RV 399
           RV
Sbjct: 122 RV 123

---

>RR4_GUITH (P17072) Chloroplast 30S ribosomal protein S4|
          Length = 200

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +1

Query: 304 LARRLQTLXFKAGMAKSIHHARVLIRQRHIRV 399
           L  RL  + F+ GMA +I  AR L+   HI+V
Sbjct: 88  LEMRLDNVIFRLGMAPTIPAARQLVNHGHIKV 119

---

>CHD4_HUMAN (Q14839) Chromodomain helicase-DNA-binding protein 4 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD4) (CHD-4) (Mi-2 autoantigen
            218 kDa protein) (Mi2-beta)
          Length = 1912

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 282  KDVIKLVLALSKEPIAVHAAKKSCTLKDTAGILLIQCEQVPCSITDPAQCILDPPE 115
            +D IK+     KE  ++   K+   +K TA    I+C Q P   ++  + +++PPE
Sbjct: 1561 EDGIKIEENSLKEEESIEGEKE---VKSTAPETAIECTQAPAPASEDEKVVVEPPE 1613

---

>RS4_PELLD (Q3B6D7) 30S ribosomal protein S4|
          Length = 203

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
 Frame = +1

Query: 127 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 303
           Q+   R    + + L L EK   +   G  L ++   Y   A  Q        +T +N  
Sbjct: 36  QHGQGRRGKISEYALQLREKQKMKYLYGI-LEKQFRNYYKKAVSQR------GVTGDNLV 88

Query: 304 --LARRLQTLXFKAGMAKSIHHARVLIRQRHIRV-GRQI 411
             + RRL  + F+AG A S   AR L+   H+ V GR++
Sbjct: 89  KLIERRLDNVVFRAGFAPSRAGARQLVSHSHLLVNGRKV 127

---

>RS4_LACJO (Q74K05) 30S ribosomal protein S4|
          Length = 203

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +1

Query: 235 RYGLLAEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRV 399
           R G + EG+  ++++        L RRL  + ++ G+A +   AR L+   HI V
Sbjct: 74  RAGKIREGKHGVNFMA------LLERRLDNIVYRLGLASTREQARQLVNHGHILV 122

---

>RS4_BACTN (Q8A4A1) 30S ribosomal protein S4|
          Length = 201

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 28/109 (25%), Positives = 46/109 (42%)
 Frame = +1

Query: 85  GEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 264
           G++G   KR+       L R +  A++   + EK  R +FE AA  + +    LL     
Sbjct: 34  GQHGNSRKRKTSEYGVQL-REKQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL----- 87

Query: 265 KLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
                        L  RL  + F+ G+A +   AR L+  +HI V  ++
Sbjct: 88  -----------QLLEGRLDNVVFRLGIAPTRAAARQLVSHKHITVDGEV 125

---

>SOX7_MOUSE (P40646) Transcription factor SOX-7 (mSOX7)|
          Length = 380

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 15/85 (17%)
 Frame = -3

Query: 256 PQQGAHSGSCGEEELHPQR--------YGGD-------SSHPV*ASALQHYGSCSMHTGP 122
           P+Q   S SC EE  HP          Y  +        SHP+ + AL      SM +  
Sbjct: 207 PEQTFFSSSCQEEHGHPHHLPHLPGPPYSPEFTPSPLHCSHPLGSLALGQSPGVSMMSSV 266

Query: 121 SRAHACTSVHTHPPALVLHPDAPSH 47
           S      + ++H     LHP+  +H
Sbjct: 267 SGCPPSPAYYSHATYHPLHPNLQAH 291

---

>CH60_MYCGE (P47632) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 543

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 327 KSLKAPCKEVLSSQGKDVIKLVLALSKEPIAV 232
           KSL+AP ++++ + G D +K++  L  E   V
Sbjct: 454 KSLEAPARQIIQNSGVDPVKILSELKNEKTGV 485

---

>PCSK9_HUMAN (Q8NBP7) Proprotein convertase subtilisin/kexin type 9 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC9)
           (Subtilisin/kexin-like protease PC9) (Neural
           apoptosis-regulated convertase 1) (NARC-1)
          Length = 692

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -3

Query: 199 YGGDSSHPV*ASALQHYGSCSMHTG-PSRAHACTSVHTHPPALVL 68
           +GG+  + +    L    +CS+HT  P+ A   T VH H    VL
Sbjct: 515 FGGEGVYAIARCCLLPQANCSVHTAPPAEASMGTRVHCHQQGHVL 559

---

>DDPS7_ARATH (Q8LED0) Dehydrodolichyl diphosphate synthase 7 (EC 2.5.1.-)|
           (Dedol-PP synthase 7)
          Length = 271

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
 Frame = -1

Query: 297 LSSQGKDVIKLV-LALSKEPIAVHAAKKSCTLKDTAGILLIQCEQVPCSITDPAQC---- 133
           L+ + +D+I +V +A S     VHA +KSC  K T G  L+  E     ++D  +C    
Sbjct: 151 LTEENRDLIVVVCVAYSTSLEIVHAVRKSCVRKCTNGDDLVLLE-----LSDVEECMYTS 205

Query: 132 ILDPPELTL 106
           I+  P+L +
Sbjct: 206 IVPVPDLVI 214

---

>CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3.2.-) (Signal|
           transduction protein CBL-B-A) (SH3-binding protein
           CBL-B-A)
          Length = 918

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 26/76 (34%), Positives = 30/76 (39%)
 Frame = +3

Query: 174 TG*EESPPYL*GCSSSSPHEPLWAPC*GPGQA*LRPCPDC*ELPCKAPSDSXLQGWHGKV 353
           TG  +S P    C      +PL AP        LR  P   E P   P DS     H   
Sbjct: 537 TGSPKSSP----CMVRKQDKPLPAP-----PPLLREPPPPPERPPPIPPDSRTCR-HLHH 586

Query: 354 HPPCPCLDQATPHQGW 401
               PC DQ+TPH+ W
Sbjct: 587 ADNVPCRDQSTPHEAW 602

---

>RS4_CHLCH (Q3APJ9) 30S ribosomal protein S4|
          Length = 203

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
 Frame = +1

Query: 127 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 303
           Q+   R    + + L L EK   +   G  L ++   Y   A  Q        +T +N  
Sbjct: 36  QHGQGRKGKISEYALQLREKQKMKYLYGI-LEKQFRNYYKKAVAQR------GVTGDNLV 88

Query: 304 --LARRLQTLXFKAGMAKSIHHARVLIRQRHIRV 399
             L RRL  + F+AG + S   AR L+   H+ V
Sbjct: 89  KLLERRLDNIVFRAGFSPSRAGARQLVSHGHVTV 122

---

>YS4L_PNECA (Q01688) Putative 40S ribosomal protein S4-like (Fragment)|
          Length = 169

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 20/114 (17%), Positives = 45/114 (39%)
 Frame = +1

Query: 70  ELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLL 249
           ++ ++  Y +  + + ++    +  +   A  L  L+  +         LL ++    LL
Sbjct: 29  DVNVIRRYHIPQREDYFKYNQLVGLLLGIANKLSLLEPTDSFGNLHKKMLLGKLFDMALL 88

Query: 250 AEGQDKLDYVLALTAENFLARRLQTLXFKAGMAKSIHHARVLIRQRHIRVGRQI 411
                  D    LT   F  RRL  +  +  M +++  +   +   H+RVG ++
Sbjct: 89  TSTPKLSDVENKLTVSAFCRRRLPVVMCRLKMCETVSTSVKYVEHGHVRVGPEV 142

---

>RR4B_CYACA (O22029) Chloroplast 30S ribosomal protein S4|
          Length = 192

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 25/103 (24%)
 Frame = +1

Query: 166 LLTLDEKNPRRIF----EGAALLRRMNRYGLLAEGQDKLDYVLALTAENF---------- 303
           L  L  K+P++      E A   R+++ + +  + + KL Y   +T              
Sbjct: 18  LPALTNKSPKKRTIAPGEHAHKTRKLSEFAVQLQEKQKLQYYYGITNSQLARYFRQARRS 77

Query: 304 -----------LARRLQTLXFKAGMAKSIHHARVLIRQRHIRV 399
                      L  RL  L ++AG A ++  AR L+   H++V
Sbjct: 78  KSSTGLALLTMLETRLDHLVYRAGFAPTLPAARQLVNHGHVKV 120

---

>RS4_DESVH (Q72CF5) 30S ribosomal protein S4|
          Length = 208

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
 Frame = +1

Query: 220 LRRMNRYGLLAEGQD----KLDYVLALTAENFLA---RRLQTLXFKAGMAKSIHHARVLI 378
           +RRM  YG+L +       K D    +T  N L+   RRL  + ++ G A S + AR L+
Sbjct: 63  VRRM--YGILEQQFHAYFTKADMAKGVTGANLLSLLERRLDNVIYRLGFANSRNQARQLV 120

Query: 379 R 381
           R
Sbjct: 121 R 121

---

>FAF_DROME (P55824) Probable ubiquitin carboxyl-terminal hydrolase FAF (EC|
            3.1.2.15) (Ubiquitin thioesterase FAF) (Ubiquitin
            specific-processing protease FAF) (Deubiquitinating
            enzyme FAF) (Protein fat facets)
          Length = 2778

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 49   EKERLDAELKLVGEYGLRCKRELW--RVQYALSRIRNAARHLLTLDEKNPRRIFEGAALL 222
            E E++   LK++ EY   C R     RV   LSR+      +L +  +NP R  +   ++
Sbjct: 940  EAEKMCRILKVLQEYVKECDRSFSGDRVHLPLSRVTRGKNTILYIRFQNPGRSIDDMEIV 999

Query: 223  RRMN 234
               N
Sbjct: 1000 THSN 1003

---

>VE4_HPV5B (P26550) Probable protein E4|
          Length = 245

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 259 GPQQGAHSGSCGEEELHP 206
           G ++GA  G CG+EE HP
Sbjct: 177 GHEEGAVGGDCGDEEGHP 194

---

>ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arabidopsis|
           thaliana envelope membrane integrase) (Ath4)
           (ALBINO3-like protein 1)
          Length = 1013

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = +1

Query: 19  KTFKKPRRPYEKE--RLDAELKLVGEYGLRCKRELW 120
           K F KPRR  E E      E K   EYG R   E W
Sbjct: 479 KYFIKPRRHPESECSATQTEYKFTSEYGKRNSSECW 514

---

>O10Q1_HUMAN (Q8NGQ4) Olfactory receptor 10Q1|
          Length = 319

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 123 PPELTLAPQSILTHQL*FCIQTLLLIGTPWFLECLTIVAV 4
           PP L LA   I  HQ    + ++L++  P+ L C++ V +
Sbjct: 187 PPVLRLACADIRVHQAVLYVVSILVLTIPFLLICVSYVFI 226

---

>TRPS1_XENLA (Q90ZS6) Zinc finger transcription factor Trps1|
          Length = 1271

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 18/76 (23%), Positives = 32/76 (42%)
 Frame = -1

Query: 351 LCHASLEXKSLKAPCKEVLSSQGKDVIKLVLALSKEPIAVHAAKKSCTLKDTAGILLIQC 172
           L   + + +S   P K  + S+  D  +L  + S + +    AK+   +   A    +QC
Sbjct: 108 LALVTTDTRSACDPLKSPIKSEADDTQELASSASVDSLE---AKEENDMSPRATDFTVQC 164

Query: 171 EQVPCSITDPAQCILD 124
            +V C  + PA    D
Sbjct: 165 GKVDCQSSSPASVASD 180

---

>RS4_LEPIN (Q9XD10) 30S ribosomal protein S4|
          Length = 207

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 11/83 (13%)
 Frame = +1

Query: 184 KNPRRIFEGAALLRRMNR----YGLLAEG----QDKLDYVLALTAE---NFLARRLQTLX 330
           K   ++ E  A LR   +    YGLL +      ++  +   +T E     L RRL  + 
Sbjct: 43  KRKGKVSEYGAQLREKQKLKRAYGLLEKQFRRYYEEASHAHGVTGEILLQLLERRLDNVV 102

Query: 331 FKAGMAKSIHHARVLIRQRHIRV 399
           ++ G A +   AR  I  RHI V
Sbjct: 103 YRLGFAITRRQARNFIAHRHILV 125

---

>RS4_LEPIC (Q72NI7) 30S ribosomal protein S4|
          Length = 207

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 11/83 (13%)
 Frame = +1

Query: 184 KNPRRIFEGAALLRRMNR----YGLLAEG----QDKLDYVLALTAE---NFLARRLQTLX 330
           K   ++ E  A LR   +    YGLL +      ++  +   +T E     L RRL  + 
Sbjct: 43  KRKGKVSEYGAQLREKQKLKRAYGLLEKQFRRYYEEASHAHGVTGEILLQLLERRLDNVV 102

Query: 331 FKAGMAKSIHHARVLIRQRHIRV 399
           ++ G A +   AR  I  RHI V
Sbjct: 103 YRLGFAITRRQARNFIAHRHILV 125

---

>FLNB_MOUSE (Q80X90) Filamin-B (FLN-B) (Beta-filamin) (Actin-binding-like|
           protein) (ABP-280-like protein)
          Length = 2602

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 171 EQVPCSITDPAQCILDPPELTLAPQSIL 88
           E+  C+I +PA+ I+DP +   AP  IL
Sbjct: 656 EKSGCTINNPAEFIVDPKDAGSAPLKIL 683

---

>MYO10_BOVIN (P79114) Myosin-10 (Myosin X)|
          Length = 2052

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 28  KKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHL 168
           ++  R  E+ER +AEL+   E   R +REL  +Q    R    +R L
Sbjct: 833 EEEERERERERREAELRAQQEEAARKQRELEALQQESQRAAELSREL 879

---

>LYAM2_CANFA (P33730) E-selectin precursor (Endothelial leukocyte adhesion|
           molecule 1) (ELAM-1) (Leukocyte-endothelial cell
           adhesion molecule 2) (LECAM2) (CD62E antigen)
          Length = 611

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 1/97 (1%)
 Frame = -1

Query: 309 CKEVLSSQGKDVIKLVLALSKEPIAVHAAKKSCTLKDTAGILLIQCEQVPCSITDPAQCI 130
           C++V++ Q ++  +    +   P+   +   SC +    G L    E   C  T   +  
Sbjct: 175 CEQVVTCQAQEAPEHGSLVCTHPLGTFSYNSSCFVSCDKGYLPSSTEATQC--TSTGEWS 232

Query: 129 LDPPELTLAPQSILTHQL*FCIQTLLLIGT-PWFLEC 22
             PP   +   S LT+     +  L   G  PW + C
Sbjct: 233 ASPPACNVVECSALTNPCHGVMDCLQSSGNFPWNMTC 269


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,625,245
Number of Sequences: 219361
Number of extensions: 1215312
Number of successful extensions: 3796
Number of sequences better than 10.0: 231
Number of HSP's better than 10.0 without gapping: 3656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3751
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---