ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags24l24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016431.1| Zea mays clone Contig264 mRNA sequence Length = 866 Score = 531 bits (268), Expect = e-148 Identities = 372/407 (91%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 94 ttctaccgcaactatggtaagacgttcaagaaaccaaggcgtccttatgagaaggagcgt 153 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || ||||| ||||| |||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 154 cttgatgctgaactgaagctggtcggtgagtatgggctgaggtgcaagcgtgagctttgg 213 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || || Sbjct: 214 agggtccagtatgcactgagcaggatccgtaatgctgcaaggcacttgctcacccttgac 273 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 |||||||| ||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 274 gagaagaacccccgtcgtatctttgagggtgaggcgcttcttcgccgcatgaaccgctat 333 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 ||||| ||||||||||| ||| ||||||||||||| || |||||||| || ||||||||| Sbjct: 334 gggctgcttgctgagggtcagaacaagcttgattatgttcttgccctcaccgctgagaac 393 Query: 301 ttccttgcaaggcgccttcagactcttgncttcaaggctggcatggcaaagtccatccac 360 ||||| |||||||| ||||| || |||| |||||||||||||||||| |||||||| ||| Sbjct: 394 ttcctcgcaaggcggcttcaaacacttgtcttcaaggctggcatggccaagtccattcac 453 Query: 361 catgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 407 ||||| ||||||||||||| ||| || |||||||||||||||||||| Sbjct: 454 catgctcgtgtcttgatcaagcagcgtcacatcagggttggcaggca 500
>dbj|AK104761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H02, full insert sequence Length = 884 Score = 468 bits (236), Expect = e-129 Identities = 364/407 (89%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 |||||||||||||||||||||||||||||||| ||| | || || || |||||||||||| Sbjct: 80 ttctaccgcaactatggtaagacattcaagaagccacgtcgcccttacgagaaggagcgt 139 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 140 cttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtgg 199 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 | || |||||||| |||||| | |||||||| ||||||||| |||||||||| ||| Sbjct: 200 cgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcatctgctcacacttgat 259 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 ||||||||||| ||||| ||||||||||||| || || ||||||||||||||||| ||| Sbjct: 260 gagaagaatccacgccgcatctttgagggtgaggcactgcttcgccgcatgaaccgttat 319 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 |||||||||||||| || ||| ||||||||||||| ||||||||||| |||| ||||||| Sbjct: 320 gggctccttgctgatgggcagaacaagcttgattatgtccttgccctcactgttgagaac 379 Query: 301 ttccttgcaaggcgccttcagactcttgncttcaaggctggcatggcaaagtccatccac 360 ||||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 380 ttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggccaagtccatccac 439 Query: 361 catgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 407 ||||| |||||| ||||||||||||||||||||||||| |||||||| Sbjct: 440 catgctcgtgtcctgatcaggcaacgccacatcagggtcggcaggca 486
>dbj|AK104660.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D11, full insert sequence Length = 955 Score = 468 bits (236), Expect = e-129 Identities = 364/407 (89%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 |||||||||||||||||||||||||||||||| ||| | || || || |||||||||||| Sbjct: 90 ttctaccgcaactatggtaagacattcaagaagccacgtcgcccttacgagaaggagcgt 149 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 150 cttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtgg 209 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 | || |||||||| |||||| | |||||||| |||||||||| |||||||||| ||| Sbjct: 210 cgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgat 269 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 ||||||||||| ||||| ||||| ||||||| || || ||||||||||||||||| ||| Sbjct: 270 gagaagaatccacgccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttat 329 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 |||||||||||||| || ||| ||||||||||||| ||||||||||| |||| ||||||| Sbjct: 330 gggctccttgctgatgggcagaacaagcttgattatgtccttgccctcactgttgagaac 389 Query: 301 ttccttgcaaggcgccttcagactcttgncttcaaggctggcatggcaaagtccatccac 360 ||||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 390 ttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggccaagtccatccac 449 Query: 361 catgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 407 ||||| |||||| ||||||||||||||||||||||||| |||||||| Sbjct: 450 catgctcgtgtcctgatcaggcaacgccacatcagggtcggcaggca 496
>dbj|AK104265.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G01, full insert sequence Length = 884 Score = 468 bits (236), Expect = e-129 Identities = 364/407 (89%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 |||||||||||||||||||||||||||||||| ||| | || || || |||||||||||| Sbjct: 80 ttctaccgcaactatggtaagacattcaagaagccacgtcgcccttacgagaaggagcgt 139 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 140 cttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtgg 199 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 | || |||||||| |||||| | |||||||| ||||||||| |||||||||| ||| Sbjct: 200 cgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcatctgctcacacttgat 259 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 ||||||||||| ||||| ||||||||||||| || || ||||||||||||||||| ||| Sbjct: 260 gagaagaatccacgccgcatctttgagggtgaggcactgcttcgccgcatgaaccgttat 319 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 |||||||||||||| || ||| ||||||||||||| ||||||||||| |||| ||||||| Sbjct: 320 gggctccttgctgatgggcagaacaagcttgattatgtccttgccctcactgttgagaac 379 Query: 301 ttccttgcaaggcgccttcagactcttgncttcaaggctggcatggcaaagtccatccac 360 ||||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 380 ttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggccaagtccatccac 439 Query: 361 catgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 407 ||||| |||||| ||||||||||||||||||||||||| |||||||| Sbjct: 440 catgctcgtgtcctgatcaggcaacgccacatcagggtcggcaggca 486
>dbj|AK104111.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G08, full insert sequence Length = 970 Score = 468 bits (236), Expect = e-129 Identities = 364/407 (89%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 |||||||||||||||||||||||||||||||| ||| | || || || |||||||||||| Sbjct: 83 ttctaccgcaactatggtaagacattcaagaagccacgtcgcccttacgagaaggagcgt 142 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 143 cttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtgg 202 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 | || |||||||| |||||| | |||||||| ||||||||| |||||||||| ||| Sbjct: 203 cgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcatctgctcacacttgat 262 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 ||||||||||| ||||| ||||||||||||| || || ||||||||||||||||| ||| Sbjct: 263 gagaagaatccacgccgcatctttgagggtgaggcactgcttcgccgcatgaaccgttat 322 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 |||||||||||||| || ||| ||||||||||||| ||||||||||| |||| ||||||| Sbjct: 323 gggctccttgctgatgggcagaacaagcttgattatgtccttgccctcactgttgagaac 382 Query: 301 ttccttgcaaggcgccttcagactcttgncttcaaggctggcatggcaaagtccatccac 360 ||||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 383 ttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggccaagtccatccac 442 Query: 361 catgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 407 ||||| |||||| ||||||||||||||||||||||||| |||||||| Sbjct: 443 catgctcgtgtcctgatcaggcaacgccacatcagggtcggcaggca 489
>dbj|AK072671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134P20, full insert sequence Length = 964 Score = 468 bits (236), Expect = e-129 Identities = 364/407 (89%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 |||||||||||||||||||||||||||||||| ||| | || || || |||||||||||| Sbjct: 79 ttctaccgcaactatggtaagacattcaagaagccacgtcgcccttacgagaaggagcgt 138 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 139 cttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtgg 198 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 | || |||||||| |||||| | |||||||| |||||||||| |||||||||| ||| Sbjct: 199 cgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgat 258 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 ||||||||||| ||||| ||||| ||||||| || || ||||||||||||||||| ||| Sbjct: 259 gagaagaatccacgccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttat 318 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 |||||||||||||| || ||| ||||||||||||| ||||||||||| |||| ||||||| Sbjct: 319 gggctccttgctgatgggcagaacaagcttgattatgtccttgccctcactgttgagaac 378 Query: 301 ttccttgcaaggcgccttcagactcttgncttcaaggctggcatggcaaagtccatccac 360 ||||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 379 ttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggccaagtccatccac 438 Query: 361 catgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 407 ||||| |||||| ||||||||||||||||||||||||| |||||||| Sbjct: 439 catgctcgtgtcctgatcaggcaacgccacatcagggtcggcaggca 485
>dbj|AK061350.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F09, full insert sequence Length = 972 Score = 468 bits (236), Expect = e-129 Identities = 364/407 (89%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 |||||||||||||||||||||||||||||||| ||| | || || || |||||||||||| Sbjct: 80 ttctaccgcaactatggtaagacattcaagaagccacgtcgcccttacgagaaggagcgt 139 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 140 cttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtgg 199 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 | || |||||||| |||||| | |||||||| ||||||||| |||||||||| ||| Sbjct: 200 cgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcatctgctcacacttgat 259 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 ||||||||||| ||||| ||||||||||||| || || ||||||||||||||||| ||| Sbjct: 260 gagaagaatccacgccgcatctttgagggtgaggcactgcttcgccgcatgaaccgttat 319 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 |||||||||||||| || ||| ||||||||||||| ||||||||||| |||| ||||||| Sbjct: 320 gggctccttgctgatgggcagaacaagcttgattatgtccttgccctcactgttgagaac 379 Query: 301 ttccttgcaaggcgccttcagactcttgncttcaaggctggcatggcaaagtccatccac 360 ||||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 380 ttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggccaagtccatccac 439 Query: 361 catgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 407 ||||| |||||| ||||||||||||||||||||||||| |||||||| Sbjct: 440 catgctcgtgtcctgatcaggcaacgccacatcagggtcggcaggca 486
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 428 bits (216), Expect = e-117 Identities = 341/383 (89%) Strand = Plus / Plus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 2969159 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 2969218 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 2969219 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 2969278 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | |||||| | |||||||| ||||||||| |||||||||| |||||||||||||| | Sbjct: 2969279 ctttgagccgtatccgtaacaatgcaaggcatctgctcacacttgatgagaagaatccac 2969338 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 |||| ||||||||||||| || || ||||||||||||||||| |||||||||||||||| Sbjct: 2969339 gccgcatctttgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 2969398 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 313 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 2969399 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 2969458 Query: 314 gccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 373 | ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 2969459 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 2969518 Query: 374 tgatcaggcaacgccacatcagg 396 ||||||||||||||||||||||| Sbjct: 2969519 tgatcaggcaacgccacatcagg 2969541 Score = 184 bits (93), Expect = 2e-43 Identities = 243/293 (82%) Strand = Plus / Plus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 |||| ||||| |||||||||||||||||||| || ||||| ||||||| ||||| || | Sbjct: 14844782 atggcaagactttcaagaaaccaaggcgtccatacgagaaagagcgtcctgatgctgagc 14844841 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | |||||| ||||||||||| || |||| |||| ||||||| ||| | || ||||| | Sbjct: 14844842 tgaagctgtatggtgagtatggcctcaggtccaagtgtgagctgtggcgtgtgcagtaag 14844901 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | | ||| ||||| |||||||||||| | ||||||| || ||||||||||| |||| Sbjct: 14844902 ccctaagccctatccgcaatgctgcaagggagctgctcacccttgatgagaagaaccccc 14844961 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 | |||||||||||||| | ||||| || |||| ||||||||||||||| ||||||| || Sbjct: 14844962 gacgtatctttgagggcgaggctctcctgcgccacatgaaccgctatggtctccttggtg 14845021 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttcctt 306 |||||||| |||||||||||||||| ||||| || || | ||||||||||||| Sbjct: 14845022 agggccagaacaagcttgattacgtgcttgcgctcaccgttgagaacttcctt 14845074
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 428 bits (216), Expect = e-117 Identities = 341/383 (89%) Strand = Plus / Minus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 9481 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 9422 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 9421 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 9362 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 9361 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 9302 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 |||| ||||| ||||||| || || ||||||||||||||||| |||||||||||||||| Sbjct: 9301 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 9242 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 313 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 9241 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 9182 Query: 314 gccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 373 | ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 9181 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 9122 Query: 374 tgatcaggcaacgccacatcagg 396 ||||||||||||||||||||||| Sbjct: 9121 tgatcaggcaacgccacatcagg 9099 Score = 420 bits (212), Expect = e-114 Identities = 340/383 (88%) Strand = Plus / Minus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 14240 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 14181 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 14180 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 14121 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 14120 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 14061 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 |||| ||||| ||||||| || || ||||||||||||||||| |||||||||||||||| Sbjct: 14060 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 14001 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 313 | || ||| ||||||||||||| ||||||||||| |||| ||||||||| || ||||||| Sbjct: 14000 atgggcagaacaagcttgattatgtccttgccctcactgttgagaactttctcgcaaggc 13941 Query: 314 gccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 373 | ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 13940 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 13881 Query: 374 tgatcaggcaacgccacatcagg 396 ||||||||||||||||||||||| Sbjct: 13880 tgatcaggcaacgccacatcagg 13858
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 428 bits (216), Expect = e-117 Identities = 341/383 (89%) Strand = Plus / Minus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 120999 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 120940 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 120939 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 120880 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 120879 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 120820 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 |||| ||||| ||||||| || || ||||||||||||||||| |||||||||||||||| Sbjct: 120819 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 120760 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 313 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 120759 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 120700 Query: 314 gccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 373 | ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 120699 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 120640 Query: 374 tgatcaggcaacgccacatcagg 396 ||||||||||||||||||||||| Sbjct: 120639 tgatcaggcaacgccacatcagg 120617 Score = 420 bits (212), Expect = e-114 Identities = 340/383 (88%) Strand = Plus / Minus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 125758 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 125699 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 125698 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 125639 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 125638 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 125579 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 |||| ||||| ||||||| || || ||||||||||||||||| |||||||||||||||| Sbjct: 125578 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 125519 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 313 | || ||| ||||||||||||| ||||||||||| |||| ||||||||| || ||||||| Sbjct: 125518 atgggcagaacaagcttgattatgtccttgccctcactgttgagaactttctcgcaaggc 125459 Query: 314 gccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 373 | ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 125458 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 125399 Query: 374 tgatcaggcaacgccacatcagg 396 ||||||||||||||||||||||| Sbjct: 125398 tgatcaggcaacgccacatcagg 125376
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 428 bits (216), Expect = e-117 Identities = 341/383 (89%) Strand = Plus / Plus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 106646 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 106705 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 106706 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 106765 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | |||||| | |||||||| ||||||||| |||||||||| |||||||||||||| | Sbjct: 106766 ctttgagccgtatccgtaacaatgcaaggcatctgctcacacttgatgagaagaatccac 106825 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 |||| ||||||||||||| || || ||||||||||||||||| |||||||||||||||| Sbjct: 106826 gccgcatctttgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 106885 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 313 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 106886 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 106945 Query: 314 gccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 373 | ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 106946 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 107005 Query: 374 tgatcaggcaacgccacatcagg 396 ||||||||||||||||||||||| Sbjct: 107006 tgatcaggcaacgccacatcagg 107028
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 428 bits (216), Expect = e-117 Identities = 341/383 (89%) Strand = Plus / Plus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 22331817 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 22331876 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 22331877 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 22331936 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 22331937 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 22331996 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 |||| ||||| ||||||| || || ||||||||||||||||| |||||||||||||||| Sbjct: 22331997 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 22332056 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 313 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 22332057 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 22332116 Query: 314 gccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 373 | ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 22332117 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 22332176 Query: 374 tgatcaggcaacgccacatcagg 396 ||||||||||||||||||||||| Sbjct: 22332177 tgatcaggcaacgccacatcagg 22332199 Score = 420 bits (212), Expect = e-114 Identities = 340/383 (88%) Strand = Plus / Plus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 22327058 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 22327117 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 22327118 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 22327177 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 22327178 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 22327237 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 |||| ||||| ||||||| || || ||||||||||||||||| |||||||||||||||| Sbjct: 22327238 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 22327297 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 313 | || ||| ||||||||||||| ||||||||||| |||| ||||||||| || ||||||| Sbjct: 22327298 atgggcagaacaagcttgattatgtccttgccctcactgttgagaactttctcgcaaggc 22327357 Query: 314 gccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 373 | ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 22327358 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 22327417 Query: 374 tgatcaggcaacgccacatcagg 396 ||||||||||||||||||||||| Sbjct: 22327418 tgatcaggcaacgccacatcagg 22327440 Score = 46.1 bits (23), Expect = 0.089 Identities = 32/35 (91%) Strand = Plus / Minus Query: 358 caccatgcccgtgtcttgatcaggcaacgccacat 392 |||||||| ||||||||||| ||||||| |||||| Sbjct: 19413196 caccatgctcgtgtcttgattaggcaacaccacat 19413162
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 428 bits (216), Expect = e-117 Identities = 341/383 (89%) Strand = Plus / Plus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 2969270 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 2969329 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 2969330 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 2969389 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | |||||| | |||||||| ||||||||| |||||||||| |||||||||||||| | Sbjct: 2969390 ctttgagccgtatccgtaacaatgcaaggcatctgctcacacttgatgagaagaatccac 2969449 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 |||| ||||||||||||| || || ||||||||||||||||| |||||||||||||||| Sbjct: 2969450 gccgcatctttgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 2969509 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 313 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 2969510 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 2969569 Query: 314 gccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 373 | ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 2969570 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 2969629 Query: 374 tgatcaggcaacgccacatcagg 396 ||||||||||||||||||||||| Sbjct: 2969630 tgatcaggcaacgccacatcagg 2969652 Score = 184 bits (93), Expect = 2e-43 Identities = 243/293 (82%) Strand = Plus / Plus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 |||| ||||| |||||||||||||||||||| || ||||| ||||||| ||||| || | Sbjct: 14839316 atggcaagactttcaagaaaccaaggcgtccatacgagaaagagcgtcctgatgctgagc 14839375 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | |||||| ||||||||||| || |||| |||| ||||||| ||| | || ||||| | Sbjct: 14839376 tgaagctgtatggtgagtatggcctcaggtccaagtgtgagctgtggcgtgtgcagtaag 14839435 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | | ||| ||||| |||||||||||| | ||||||| || ||||||||||| |||| Sbjct: 14839436 ccctaagccctatccgcaatgctgcaagggagctgctcacccttgatgagaagaaccccc 14839495 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 | |||||||||||||| | ||||| || |||| ||||||||||||||| ||||||| || Sbjct: 14839496 gacgtatctttgagggcgaggctctcctgcgccacatgaaccgctatggtctccttggtg 14839555 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttcctt 306 |||||||| |||||||||||||||| ||||| || || | ||||||||||||| Sbjct: 14839556 agggccagaacaagcttgattacgtgcttgcgctcaccgttgagaacttcctt 14839608
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 428 bits (216), Expect = e-117 Identities = 341/383 (89%) Strand = Plus / Plus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 22641728 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 22641787 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 22641788 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 22641847 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 22641848 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 22641907 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 |||| ||||| ||||||| || || ||||||||||||||||| |||||||||||||||| Sbjct: 22641908 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 22641967 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 313 | || ||| ||||||||||||| ||||||||||| |||| |||||||||||| ||||||| Sbjct: 22641968 atgggcagaacaagcttgattatgtccttgccctcactgttgagaacttcctcgcaaggc 22642027 Query: 314 gccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 373 | ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 22642028 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 22642087 Query: 374 tgatcaggcaacgccacatcagg 396 ||||||||||||||||||||||| Sbjct: 22642088 tgatcaggcaacgccacatcagg 22642110 Score = 420 bits (212), Expect = e-114 Identities = 340/383 (88%) Strand = Plus / Plus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 ||||||||||||||||||| ||| | || || || |||||||||||||| |||||||| | Sbjct: 22636969 atggtaagacattcaagaagccacgtcgcccttacgagaaggagcgtcttgatgcagagc 22637028 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | ||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||| Sbjct: 22637029 tgaagctagtgggtgagtatggactgaggtgcaagcgtgagctgtggcgtgttcagtatg 22637088 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | |||||| | |||||||| |||||||||| |||||||||| |||||||||||||| | Sbjct: 22637089 ctttgagccgtatccgtaacaatgcaaggcacctgctcacacttgatgagaagaatccac 22637148 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 |||| ||||| ||||||| || || ||||||||||||||||| |||||||||||||||| Sbjct: 22637149 gccgcatcttcgagggtgaggcactgcttcgccgcatgaaccgttatgggctccttgctg 22637208 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggc 313 | || ||| ||||||||||||| ||||||||||| |||| ||||||||| || ||||||| Sbjct: 22637209 atgggcagaacaagcttgattatgtccttgccctcactgttgagaactttctcgcaaggc 22637268 Query: 314 gccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtct 373 | ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 22637269 gtcttcagactcttgtcttcaaggctggcatggccaagtccatccaccatgctcgtgtcc 22637328 Query: 374 tgatcaggcaacgccacatcagg 396 ||||||||||||||||||||||| Sbjct: 22637329 tgatcaggcaacgccacatcagg 22637351 Score = 46.1 bits (23), Expect = 0.089 Identities = 32/35 (91%) Strand = Plus / Minus Query: 358 caccatgcccgtgtcttgatcaggcaacgccacat 392 |||||||| ||||||||||| ||||||| |||||| Sbjct: 19572745 caccatgctcgtgtcttgattaggcaacaccacat 19572711
>gb|AY106684.1| Zea mays PCO086432 mRNA sequence Length = 965 Score = 280 bits (141), Expect = 3e-72 Identities = 341/408 (83%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 ||||||||||||||||| ||||| |||||||| |||||||| || |||||||||||||| Sbjct: 124 ttctaccgcaactatgggaagactttcaagaagccaaggcggccgtatgagaaggagcgc 183 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || ||||| || || |||||||| ||||||||||| ||| |||||||||||||||| ||| Sbjct: 184 ctagatgctgagctgaagctggttggtgagtatggcctgcggtgcaagcgtgagctgtgg 243 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 | || |||||||| ||||| | ||| | ||||| || ||| | |||||||| |||||| Sbjct: 244 cgcgtgcagtatgccctgagccgtatcaggaatgcagccagggagttgctcaccctggat 303 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 |||||||| || ||||||||||||||||| | || || || || ||||||||| | ||| Sbjct: 304 gagaagaacccacgccgtatctttgagggcgaggcgctcctccgtcgcatgaacagatat 363 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 || || |||| ||||| ||| |||||||||||||||| |||||||| |||| ||||||| Sbjct: 364 ggtcttcttggcgagggacagaacaagcttgattacgtgcttgccctcactgttgagaac 423 Query: 301 ttccttgcaaggcgccttcagactcttgncttcaaggctggcatggcaaagtccatccac 360 ||||| | ||||| ||||| | | ||||||| ||||||||| |||||||||||| Sbjct: 424 ttcctccagcgccgcctccagaccatcgtcttcaagaatggcatggccaagtccatccac 483 Query: 361 catgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 408 ||||| |||||| |||||||||| |||||||||||||| || |||||| Sbjct: 484 catgctcgtgtcctgatcaggcagcgccacatcagggtgggaaggcag 531
>gb|BT016876.1| Zea mays clone Contig709 mRNA sequence Length = 969 Score = 272 bits (137), Expect = 8e-70 Identities = 340/408 (83%) Strand = Plus / Minus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 ||||||||||||||||| ||||| |||||||| |||||||| || |||||||||||||| Sbjct: 891 ttctaccgcaactatgggaagactttcaagaagccaaggcggccgtatgagaaggagcgc 832 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || ||||| || || |||||||| ||||||||||| ||| |||||||||| ||||| ||| Sbjct: 831 ctagatgctgagctgaagctggttggtgagtatggcctgcggtgcaagcgcgagctgtgg 772 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 | || |||||||| ||||| | ||| | ||||| || ||| | ||||||| |||||| Sbjct: 771 cgcgtgcagtatgccctgagccgtatcaggaatgcagccagggagctgctcaccctggat 712 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 |||||||| || ||||||||||||||||| | || || || |||||||||||| | ||| Sbjct: 711 gagaagaacccacgccgtatctttgagggcgaggcgctcctccgccgcatgaacagatat 652 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 || || |||| ||||| ||| |||||||||||||||| |||||||| |||| ||||||| Sbjct: 651 ggtcttcttggcgagggacagaacaagcttgattacgtgcttgccctcactgttgagaac 592 Query: 301 ttccttgcaaggcgccttcagactcttgncttcaaggctggcatggcaaagtccatccac 360 ||||| | ||||| ||||| | | ||||||| ||||||||| |||||||||||| Sbjct: 591 ttcctccagcgccgcctccagaccatcgtcttcaagaatggcatggccaagtccatccac 532 Query: 361 catgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 408 ||||| |||||| |||||||||| |||||||||||||| || |||||| Sbjct: 531 catgctcgtgtcctgatcaggcagcgccacatcagggtgggaaggcag 484
>gb|BT016340.1| Zea mays clone Contig173 mRNA sequence Length = 806 Score = 232 bits (117), Expect = 7e-58 Identities = 337/408 (82%), Gaps = 2/408 (0%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 ||||| ||||||||||||||||| |||||||| |||||||| || |||||||||||||| Sbjct: 98 ttctatcgcaactatggtaagactttcaagaagccaaggcggccttatgagaaggagcgc 157 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || ||||| || | || | |||||||| ||||| |||||||||||||||||||| ||| Sbjct: 158 cttgatgctgagttgaaattagtgggtgaatatggcctgaggtgcaagcgtgagctgtgg 217 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 | || |||||||| | ||| | ||||| |||||||||||| | ||||||| || ||| Sbjct: 218 cgtgtgcagtatgccctcagccgcatccgaaatgctgcaagggagctgctcacccttgat 277 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 |||||||| ||||| |||||||||||||| | || || || |||||||||||||||||| Sbjct: 278 gagaagaacccccgtcgtatctttgagggcgaggcactcctgcgccgcatgaaccgctat 337 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 || || || | |||||||||| |||||||||| || || ||||| || || | ||||||| Sbjct: 338 ggtcttctcggtgagggccagaacaagcttgactatgtgcttgcactcaccgttgagaac 397 Query: 301 ttccttgca-aggcgccttcagactcttgncttcaaggctggcatggcaaagtccatcca 359 || | |||| | |||||||||||| ||| ||||||| ||||||||| |||||||| || Sbjct: 398 tttc-tgcagcgccgccttcagactattgtcttcaagaatggcatggcgaagtccattca 456 Query: 360 ccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 407 || || ||||| | ||||||||||||||||| || ||||| ||||| Sbjct: 457 tcacgctcgtgtgctcatcaggcaacgccacattagagttgggaggca 504
>gb|AY105823.1| Zea mays PCO145462 mRNA sequence Length = 959 Score = 232 bits (117), Expect = 7e-58 Identities = 337/408 (82%), Gaps = 2/408 (0%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 ||||| ||||||||||||||||| |||||||| |||||||| || |||||||||||||| Sbjct: 107 ttctatcgcaactatggtaagactttcaagaagccaaggcggccttatgagaaggagcgc 166 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || ||||| || | || | |||||||| ||||| |||||||||||||||||||| ||| Sbjct: 167 cttgatgctgagttgaaattagtgggtgaatatggcctgaggtgcaagcgtgagctgtgg 226 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 | || |||||||| | ||| | ||||| |||||||||||| | ||||||| || ||| Sbjct: 227 cgtgtgcagtatgccctcagccgcatccgaaatgctgcaagggagctgctcacccttgat 286 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 |||||||| ||||| |||||||||||||| | || || || |||||||||||||||||| Sbjct: 287 gagaagaacccccgtcgtatctttgagggcgaggcactcctgcgccgcatgaaccgctat 346 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 || || || | |||||||||| |||||||||| || || ||||| || || | ||||||| Sbjct: 347 ggtcttctcggtgagggccagaacaagcttgactatgtgcttgcactcaccgttgagaac 406 Query: 301 ttccttgca-aggcgccttcagactcttgncttcaaggctggcatggcaaagtccatcca 359 || | |||| | ||||||||||| ||| ||||||| ||||||||| |||||||| || Sbjct: 407 tttc-tgcagcgccgccttcagaccattgtcttcaagaatggcatggcgaagtccattca 465 Query: 360 ccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 407 ||||| ||||| | ||||||||||||||||| || ||||| ||||| Sbjct: 466 tcatgctcgtgtgctcatcaggcaacgccacattagagttgggaggca 513
>dbj|AK064760.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H01, full insert sequence Length = 989 Score = 202 bits (102), Expect = 6e-49 Identities = 255/306 (83%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 ||||| ||||||||||| ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 110 ttctatcgcaactatggcaagactttcaagaaaccaaggcgtccatacgagaaagagcgt 169 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 | ||||| || || |||||| ||||||||||| || |||| |||| ||||||| ||| Sbjct: 170 cctgatgctgagctgaagctgtatggtgagtatggcctcaggtccaagtgtgagctgtgg 229 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 | || ||||| || | ||| ||||| |||||||||||| | ||||||| || ||| Sbjct: 230 cgtgtgcagtaagccctaagccctatccgcaatgctgcaagggagctgctcacccttgat 289 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 |||||||| ||||| |||||||||||||| | ||||| || |||| ||||||||||||| Sbjct: 290 gagaagaacccccgacgtatctttgagggcgaggctctcctgcgccacatgaaccgctat 349 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 || ||||||| |||||||||| |||||||||||||||| ||||| || || | ||||||| Sbjct: 350 ggtctccttggtgagggccagaacaagcttgattacgtgcttgcgctcaccgttgagaac 409 Query: 301 ttcctt 306 |||||| Sbjct: 410 ttcctt 415
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 184 bits (93), Expect = 2e-43 Identities = 243/293 (82%) Strand = Plus / Minus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 |||| ||||| |||||||||||||||||||| || ||||| ||||||| ||||| || | Sbjct: 87986 atggcaagactttcaagaaaccaaggcgtccatacgagaaagagcgtcctgatgctgagc 87927 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatg 133 | |||||| ||||||||||| || |||| |||| ||||||| ||| | || ||||| | Sbjct: 87926 tgaagctgtatggtgagtatggcctcaggtccaagtgtgagctgtggcgtgtgcagtaag 87867 Query: 134 cattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatcccc 193 | | ||| ||||| |||||||||||| | ||||||| || ||||||||||| |||| Sbjct: 87866 ccctaagccctatccgcaatgctgcaagggagctgctcacccttgatgagaagaaccccc 87807 Query: 194 gccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctg 253 | |||||||||||||| | ||||| || |||| ||||||||||||||| ||||||| || Sbjct: 87806 gacgtatctttgagggcgaggctctcctgcgccacatgaaccgctatggtctccttggtg 87747 Query: 254 agggccaggacaagcttgattacgtccttgccctgactgctgagaacttcctt 306 |||||||| |||||||||||||||| ||||| || || | ||||||||||||| Sbjct: 87746 agggccagaacaagcttgattacgtgcttgcgctcaccgttgagaacttcctt 87694
>ref|NM_123348.1| Arabidopsis thaliana structural constituent of ribosome AT5G39850 mRNA, complete cds Length = 879 Score = 127 bits (64), Expect = 3e-26 Identities = 321/407 (78%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 |||||||| |||||||| || ||||||||||| ||| | ||||| |||||||| |||||| Sbjct: 47 ttctaccgaaactatgggaaaacattcaagaagccacgtcgtccttatgagaaagagcgt 106 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || ||||| || |||||||| || || || || || || | || ||| | ||||| ||| Sbjct: 107 cttgatgctgagctaaagcttgttggagaatacggtcttcgttgtaagagagagctttgg 166 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 || || || ||| || | ||||| ||||||||||||||||| | | | || || ||| Sbjct: 167 agagttcaatatacacttagcagaatccgtaatgctgcaagagaactcttaactcttgat 226 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 ||||||||||| || ||||||||||| |||| |||||||||| | | ||||| || ||| Sbjct: 227 gagaagaatcctcgtcgtatctttgaaggtgaagctcttcttaggagaatgaatcgatat 286 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 || || |||| ||| |||| ||||||||||||| || ||||| |||||| |||||| Sbjct: 287 ggtcttcttgatgaaacccagaacaagcttgattatgttcttgctttgactgttgagaat 346 Query: 301 ttccttgcaaggcgccttcagactcttgncttcaaggctggcatggcaaagtccatccac 360 ||||||| | | || || || ||| ||| ||| ||| |||| ||||| |||||||| ||| Sbjct: 347 ttccttgaacgtcgtctccaaactattgtctttaagtctggtatggctaagtccattcac 406 Query: 361 catgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 407 || || |||||| | ||| | ||| | || ||||||||||| ||||| Sbjct: 407 cacgctcgtgtccttatccgacaaaggcatatcagggttgggaggca 453
>gb|BT024915.1| Arabidopsis thaliana At5g39850 mRNA, complete cds Length = 594 Score = 127 bits (64), Expect = 3e-26 Identities = 321/407 (78%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 |||||||| |||||||| || ||||||||||| ||| | ||||| |||||||| |||||| Sbjct: 16 ttctaccgaaactatgggaaaacattcaagaagccacgtcgtccttatgagaaagagcgt 75 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || ||||| || |||||||| || || || || || || | || ||| | ||||| ||| Sbjct: 76 cttgatgctgagctaaagcttgttggagaatacggtcttcgttgtaagagagagctttgg 135 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 || || || ||| || | ||||| ||||||||||||||||| | | | || || ||| Sbjct: 136 agagttcaatatacacttagcagaatccgtaatgctgcaagagaactcttaactcttgat 195 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 ||||||||||| || ||||||||||| |||| |||||||||| | | ||||| || ||| Sbjct: 196 gagaagaatcctcgtcgtatctttgaaggtgaagctcttcttaggagaatgaatcgatat 255 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 || || |||| ||| |||| ||||||||||||| || ||||| |||||| |||||| Sbjct: 256 ggtcttcttgatgaaacccagaacaagcttgattatgttcttgctttgactgttgagaat 315 Query: 301 ttccttgcaaggcgccttcagactcttgncttcaaggctggcatggcaaagtccatccac 360 ||||||| | | || || || ||| ||| ||| ||| |||| ||||| |||||||| ||| Sbjct: 316 ttccttgaacgtcgtctccaaactattgtctttaagtctggtatggctaagtccattcac 375 Query: 361 catgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 407 || || |||||| | ||| | ||| | || ||||||||||| ||||| Sbjct: 376 cacgctcgtgtccttatccgacaaaggcatatcagggttgggaggca 422
>gb|AY088109.1| Arabidopsis thaliana clone 41408 mRNA, complete sequence Length = 880 Score = 127 bits (64), Expect = 3e-26 Identities = 321/407 (78%) Strand = Plus / Plus Query: 1 ttctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 |||||||| |||||||| || ||||||||||| ||| | ||||| |||||||| |||||| Sbjct: 47 ttctaccgaaactatgggaaaacattcaagaagccacgtcgtccttatgagaaagagcgt 106 Query: 61 ctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 || ||||| || |||||||| || || || || || || | || ||| | ||||| ||| Sbjct: 107 cttgatgctgagctaaagcttgttggagaatacggtcttcgttgtaagagagagctttgg 166 Query: 121 agggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggat 180 || || || ||| || | ||||| ||||||||||||||||| | | | || || ||| Sbjct: 167 agagttcaatatacacttagcagaatccgtaatgctgcaagagaactcttaactcttgat 226 Query: 181 gagaagaatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctat 240 ||||||||||| || ||||||||||| |||| |||||||||| | | ||||| || ||| Sbjct: 227 gagaagaatcctcgtcgtatctttgaaggtgaagctcttcttaggagaatgaatcgatat 286 Query: 241 gggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaac 300 || || |||| ||| |||| ||||||||||||| || ||||| |||||| |||||| Sbjct: 287 ggtcttcttgatgaaacccagaacaagcttgattatgttcttgctttgactgttgagaat 346 Query: 301 ttccttgcaaggcgccttcagactcttgncttcaaggctggcatggcaaagtccatccac 360 ||||||| | | || || || ||| ||| ||| ||| |||| ||||| |||||||| ||| Sbjct: 347 ttccttgaacgtcgtctccaaactattgtctttaagtctggtatggctaagtccattcac 406 Query: 361 catgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 407 || || |||||| | ||| | ||| | || ||||||||||| ||||| Sbjct: 407 cacgctcgtgtccttatccgacaaaggcatatcagggttgggaggca 453
>emb|AJ749993.1| Catharanthus roseus mRNA for 40S ribosomal protein S9 (rps9 gene) Length = 939 Score = 121 bits (61), Expect = 2e-24 Identities = 285/360 (79%) Strand = Plus / Plus Query: 7 cgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggat 66 ||||||||||||||||| |||||||| || | | |||||||||||||||||| ||||| Sbjct: 114 cgcaactatggtaagaccttcaagaagccccgtaggccctatgagaaggagcgtttggat 173 Query: 67 gcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtc 126 || || | ||||| || || || ||||| ||||||||||| | ||||| |||||||| Sbjct: 174 gctgagttgaagcttgttggagaatatgggttgaggtgcaagagggagctttggagggtt 233 Query: 127 cagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaag 186 || |||| |||||| | ||| | ||||||||||| | | | || ||||||||||| Sbjct: 234 caatatgttttgagccgtatcagaaatgctgcaagaaatctattgactttggatgagaag 293 Query: 187 aatccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctc 246 | || || |||||||||||||||| ||| ||| | | | |||||| | ||||| || Sbjct: 294 gacccacgtcgtatctttgagggtgaagcccttttgaggaggatgaacaggtatggtctg 353 Query: 247 cttgctgagggccaggacaagcttgattacgtccttgccctgactgctgagaacttcctt 306 |||| ||||||||| |||| |||||||| ||| | || ||||||| |||||||||||| Sbjct: 354 cttgatgagggccaaaacaaacttgattatgtcttggctctgactgtagagaacttcctt 413 Query: 307 gcaaggcgccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcc 366 | | |||||||| || |||| |||||| |||| ||||||||||| |||||||||||| Sbjct: 414 gagcgccgccttcaaacccttgttttcaagtctgggatggcaaagtcaatccaccatgcc 473
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 111 bits (56), Expect = 2e-21 Identities = 189/233 (81%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 167 tgctcacactggatgagaagaatc---cccgccgtatctttgagggtgcagctcttcttc 223 ||||||| |||||||||||||| |||| |||||||| ||||||| || || || | Sbjct: 25984912 tgctcaccctggatgagaagaacaacacccgtcgtatcttcgagggtgaggcgctcctcc 25984853 Query: 224 gccgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 283 ||||||||||| ||||||| ||||||| ||||| ||| |||||||||||||||| |||| Sbjct: 25984852 gccgcatgaactgctatggtctccttggcgagggtcagaacaagcttgattacgtgcttg 25984793 Query: 284 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgncttcaaggctggca 343 | || |||| |||||||||||| | ||||| |||| | | ||||||| ||||| Sbjct: 25984792 cactcactgttgagaacttcctctagcgccgcctctagaccatcgtcttcaagaatggca 25984733 Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 396 |||| ||||| ||||||||||| |||||| | |||||||| | |||||||||| Sbjct: 25984732 tggccaagtcaatccaccatgcacgtgtccttatcaggcagcaccacatcagg 25984680 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 |||||||||| |||||||| |||||||| || ||||||||||||||||| ||||| || | Sbjct: 25984997 atggtaagactttcaagaagccaaggcggccatatgagaaggagcgtcttgatgctgagc 25984938 Query: 74 taaagctggtgggtgagtatgga 96 | ||||||||||| ||||||||| Sbjct: 25984937 tgaagctggtgggagagtatgga 25984915
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 111 bits (56), Expect = 2e-21 Identities = 189/233 (81%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 167 tgctcacactggatgagaagaatc---cccgccgtatctttgagggtgcagctcttcttc 223 ||||||| |||||||||||||| |||| |||||||| ||||||| || || || | Sbjct: 61924 tgctcaccctggatgagaagaacaacacccgtcgtatcttcgagggtgaggcgctcctcc 61865 Query: 224 gccgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 283 ||||||||||| ||||||| ||||||| ||||| ||| |||||||||||||||| |||| Sbjct: 61864 gccgcatgaactgctatggtctccttggcgagggtcagaacaagcttgattacgtgcttg 61805 Query: 284 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgncttcaaggctggca 343 | || |||| |||||||||||| | ||||| |||| | | ||||||| ||||| Sbjct: 61804 cactcactgttgagaacttcctctagcgccgcctctagaccatcgtcttcaagaatggca 61745 Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 396 |||| ||||| ||||||||||| |||||| | |||||||| | |||||||||| Sbjct: 61744 tggccaagtcaatccaccatgcacgtgtccttatcaggcagcaccacatcagg 61692 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 |||||||||| |||||||| |||||||| || ||||||||||||||||| ||||| || | Sbjct: 62009 atggtaagactttcaagaagccaaggcggccatatgagaaggagcgtcttgatgctgagc 61950 Query: 74 taaagctggtgggtgagtatgga 96 | ||||||||||| ||||||||| Sbjct: 61949 tgaagctggtgggagagtatgga 61927
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 111 bits (56), Expect = 2e-21 Identities = 189/233 (81%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 167 tgctcacactggatgagaagaatc---cccgccgtatctttgagggtgcagctcttcttc 223 ||||||| |||||||||||||| |||| |||||||| ||||||| || || || | Sbjct: 18474 tgctcaccctggatgagaagaacaacacccgtcgtatcttcgagggtgaggcgctcctcc 18415 Query: 224 gccgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 283 ||||||||||| ||||||| ||||||| ||||| ||| |||||||||||||||| |||| Sbjct: 18414 gccgcatgaactgctatggtctccttggcgagggtcagaacaagcttgattacgtgcttg 18355 Query: 284 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgncttcaaggctggca 343 | || |||| |||||||||||| | ||||| |||| | | ||||||| ||||| Sbjct: 18354 cactcactgttgagaacttcctctagcgccgcctctagaccatcgtcttcaagaatggca 18295 Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 396 |||| ||||| ||||||||||| |||||| | |||||||| | |||||||||| Sbjct: 18294 tggccaagtcaatccaccatgcacgtgtccttatcaggcagcaccacatcagg 18242 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 |||||||||| |||||||| |||||||| || ||||||||||||||||| ||||| || | Sbjct: 18559 atggtaagactttcaagaagccaaggcggccatatgagaaggagcgtcttgatgctgagc 18500 Query: 74 taaagctggtgggtgagtatgga 96 | ||||||||||| ||||||||| Sbjct: 18499 tgaagctggtgggagagtatgga 18477
>dbj|AB010077.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH19 Length = 77380 Score = 103 bits (52), Expect = 4e-19 Identities = 276/351 (78%) Strand = Plus / Plus Query: 22 acattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaactaaagctg 81 ||||||||||| ||| | ||||| |||||||| |||||||| ||||| || |||||||| Sbjct: 2999 acattcaagaagccacgtcgtccttatgagaaagagcgtcttgatgctgagctaaagctt 3058 Query: 82 gtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagc 141 || || || || || || | || ||| | ||||| ||||| || || ||| || | ||| Sbjct: 3059 gttggagaatacggtcttcgttgtaagagagagctttggagagttcaatatacacttagc 3118 Query: 142 aggatccgtaatgctgcaaggcacttgctcacactggatgagaagaatccccgccgtatc 201 || ||||||||||||||||| | | | || || |||||||||||||| || |||||| Sbjct: 3119 agaatccgtaatgctgcaagagaactcttaactcttgatgagaagaatcctcgtcgtatc 3178 Query: 202 tttgagggtgcagctcttcttcgccgcatgaaccgctatgggctccttgctgagggccag 261 ||||| |||| |||||||||| | | ||||| || ||||| || |||| ||| |||| Sbjct: 3179 tttgaaggtgaagctcttcttaggagaatgaatcgatatggtcttcttgatgaaacccag 3238 Query: 262 gacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggcgccttcag 321 ||||||||||||| || ||||| |||||| |||||| ||||||| | | || || || Sbjct: 3239 aacaagcttgattatgttcttgctttgactgttgagaatttccttgaacgtcgtctccaa 3298 Query: 322 actcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtc 372 ||| ||| ||| ||| |||| ||||| |||||||| ||||| || |||||| Sbjct: 3299 actattgtctttaagtctggtatggctaagtccattcaccacgctcgtgtc 3349
>gb|BT013198.1| Lycopersicon esculentum clone 134354R, mRNA sequence Length = 963 Score = 91.7 bits (46), Expect = 2e-15 Identities = 130/158 (82%) Strand = Plus / Plus Query: 4 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 63 |||||||||||||| ||||| || ||||| || | ||||| |||||||||||| | || Sbjct: 97 taccgcaactatgggaagacctttaagaagcctcgccgtccttatgagaaggagaggttg 156 Query: 64 gatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagg 123 |||||||| | ||||| || || ||||||||||||||||||||| | ||| | ||||| Sbjct: 157 gatgcagagttgaagcttgttggagagtatggactgaggtgcaagagggagttgtggaga 216 Query: 124 gtccagtatgcattgagcaggatccgtaatgctgcaag 161 || |||||||| |||||| | ||| | ||||||||||| Sbjct: 217 gttcagtatgctttgagccgtatcaggaatgctgcaag 254 Score = 87.7 bits (44), Expect = 3e-14 Identities = 124/151 (82%) Strand = Plus / Plus Query: 257 gccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggcgcc 316 ||||| ||||||||||||||||| | || || |||| |||||||||||| | | | || | Sbjct: 350 gccagaacaagcttgattacgtcttggcactcactgttgagaacttcctcgaacgtcgtc 409 Query: 317 ttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtcttga 376 | || || |||| ||||||| |||||||||| ||||| ||||||||||| | || | | Sbjct: 410 tgcaaacacttgtcttcaagactggcatggccaagtcaatccaccatgcgagagtgctca 469 Query: 377 tcaggcaacgccacatcagggttggcaggca 407 |||||||| | |||||||||||||| ||||| Sbjct: 470 tcaggcaaaggcacatcagggttggaaggca 500
>ref|NM_121524.3| Arabidopsis thaliana structural constituent of ribosome AT5G15200 mRNA, complete cds Length = 885 Score = 89.7 bits (45), Expect = 7e-15 Identities = 108/129 (83%) Strand = Plus / Plus Query: 3 ctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtct 62 ||||||||||||||| ||||| |||||| |||| | ||||| || |||||||||||||| Sbjct: 65 ctaccgcaactatggaaagaccttcaagggaccacgtcgtccttacgagaaggagcgtct 124 Query: 63 ggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggag 122 ||| | ||| | |||||||| ||||||||||| ||| | |||||||||||||||||| Sbjct: 125 tgattctgaattgaagctggttggtgagtatggtctgcgtaacaagcgtgagctctggag 184 Query: 123 ggtccagta 131 || ||||| Sbjct: 185 agtgcagta 193
>gb|BT011315.1| Arabidopsis thaliana At5g15200 gene, complete cds Length = 597 Score = 89.7 bits (45), Expect = 7e-15 Identities = 108/129 (83%) Strand = Plus / Plus Query: 3 ctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtct 62 ||||||||||||||| ||||| |||||| |||| | ||||| || |||||||||||||| Sbjct: 18 ctaccgcaactatggaaagaccttcaagggaccacgtcgtccttacgagaaggagcgtct 77 Query: 63 ggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggag 122 ||| | ||| | |||||||| ||||||||||| ||| | |||||||||||||||||| Sbjct: 78 tgattctgaattgaagctggttggtgagtatggtctgcgtaacaagcgtgagctctggag 137 Query: 123 ggtccagta 131 || ||||| Sbjct: 138 agtgcagta 146 Score = 67.9 bits (34), Expect = 2e-08 Identities = 138/173 (79%) Strand = Plus / Plus Query: 229 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 288 |||||||| || ||||| |||| |||| ||||| ||||||| ||||||||| | || || Sbjct: 244 atgaaccgttacgggcttcttgatgagagccagaacaagctcgattacgtcttggctttg 303 Query: 289 actgctgagaacttccttgcaaggcgccttcagactcttgncttcaaggctggcatggca 348 |||| ||||||||| |||| | || ||||||||| ||| |||||| |||| ||||| Sbjct: 304 actgttgagaactttcttgagcgtcgtcttcagactattgtgttcaagtctggtatggct 363 Query: 349 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttgg 401 ||||| ||||| || | |||||| | |||||||| | || ||||||||||| Sbjct: 364 aagtctatccatcactctcgtgtcctcatcaggcagaggcatatcagggttgg 416
>gb|BT010847.1| Arabidopsis thaliana At5g15200 mRNA, complete cds Length = 745 Score = 89.7 bits (45), Expect = 7e-15 Identities = 108/129 (83%) Strand = Plus / Plus Query: 3 ctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtct 62 ||||||||||||||| ||||| |||||| |||| | ||||| || |||||||||||||| Sbjct: 44 ctaccgcaactatggaaagaccttcaagggaccacgtcgtccttacgagaaggagcgtct 103 Query: 63 ggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggag 122 ||| | ||| | |||||||| ||||||||||| ||| | |||||||||||||||||| Sbjct: 104 tgattctgaattgaagctggttggtgagtatggtctgcgtaacaagcgtgagctctggag 163 Query: 123 ggtccagta 131 || ||||| Sbjct: 164 agtgcagta 172 Score = 67.9 bits (34), Expect = 2e-08 Identities = 138/173 (79%) Strand = Plus / Plus Query: 229 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 288 |||||||| || ||||| |||| |||| ||||| ||||||| ||||||||| | || || Sbjct: 270 atgaaccgttacgggcttcttgatgagagccagaacaagctcgattacgtcttggctttg 329 Query: 289 actgctgagaacttccttgcaaggcgccttcagactcttgncttcaaggctggcatggca 348 |||| ||||||||| |||| | || ||||||||| ||| |||||| |||| ||||| Sbjct: 330 actgttgagaactttcttgagcgtcgtcttcagactattgtgttcaagtctggtatggct 389 Query: 349 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttgg 401 ||||| ||||| || | |||||| | |||||||| | || ||||||||||| Sbjct: 390 aagtctatccatcactctcgtgtcctcatcaggcagaggcatatcagggttgg 442
>gb|AF475098.1| Triticum aestivum 40S ribosomal protein S9 mRNA, partial cds Length = 210 Score = 89.7 bits (45), Expect = 7e-15 Identities = 45/45 (100%) Strand = Plus / Plus Query: 367 cgtgtcttgatcaggcaacgccacatcagggttggcaggcagatc 411 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 cgtgtcttgatcaggcaacgccacatcagggttggcaggcagatc 48
>emb|BX829588.1|CNS0A17H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 803 Score = 89.7 bits (45), Expect = 7e-15 Identities = 108/129 (83%) Strand = Plus / Plus Query: 3 ctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtct 62 ||||||||||||||| ||||| |||||| |||| | ||||| || |||||||||||||| Sbjct: 59 ctaccgcaactatggaaagaccttcaagggaccacgtcgtccttacgagaaggagcgtct 118 Query: 63 ggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggag 122 ||| | ||| | |||||||| ||||||||||| ||| | |||||||||||||||||| Sbjct: 119 tgattctgaattgaagctggttggtgagtatggtctgcgtaacaagcgtgagctctggag 178 Query: 123 ggtccagta 131 || ||||| Sbjct: 179 agtgcagta 187 Score = 67.9 bits (34), Expect = 2e-08 Identities = 138/173 (79%) Strand = Plus / Plus Query: 229 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 288 |||||||| || ||||| |||| |||| ||||| ||||||| ||||||||| | || || Sbjct: 284 atgaaccgttacgggcttcttgatgagagccagaacaagctcgattacgtcttggctttg 343 Query: 289 actgctgagaacttccttgcaaggcgccttcagactcttgncttcaaggctggcatggca 348 |||| ||||||||| |||| | || ||||||||| ||| |||||| |||| ||||| Sbjct: 344 actgttgagaactttcttgagcgtcgtcttcagactattgtgttcaagtctggtatggct 403 Query: 349 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttgg 401 ||||| ||||| || | |||||| | |||||||| | || ||||||||||| Sbjct: 404 aagtctatccatcactctcgtgtcctcatcaggcagaggcatatcagggttgg 456
>gb|DQ200374.1| Solanum tuberosum clone 059F12 unknown mRNA Length = 875 Score = 83.8 bits (42), Expect = 4e-13 Identities = 129/158 (81%) Strand = Plus / Plus Query: 4 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 63 |||||||||||||| ||||| || ||||| || | ||||| |||||||||||| | || Sbjct: 91 taccgcaactatggaaagacctttaagaagcctcgacgtccttatgagaaggagaggttg 150 Query: 64 gatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagg 123 |||||||| | ||||| || || |||||||||||||||||||| | ||| | ||||| Sbjct: 151 gatgcagagttgaagcttgttggagagtatggactgaggtgcaaaagggagttgtggaga 210 Query: 124 gtccagtatgcattgagcaggatccgtaatgctgcaag 161 || |||||||| |||||| | ||| | ||||||||||| Sbjct: 211 gttcagtatgctttgagccgtatcaggaatgctgcaag 248 Score = 42.1 bits (21), Expect = 1.4 Identities = 122/156 (78%) Strand = Plus / Plus Query: 252 tgagggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaag 311 |||| ||||| ||||||| ||||| ||| | || || |||| ||||||||||||| | | Sbjct: 339 tgagagccagaacaagctcgattatgtcttggcactcactgtcgagaacttccttgaacg 398 Query: 312 gcgccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgt 371 || || || || |||| |||||| |||||||||| ||||| || ||||| || | || Sbjct: 399 tcgtctgcaaacccttgtgttcaagactggcatggccaagtcaattcaccacgcaagagt 458 Query: 372 cttgatcaggcaacgccacatcagggttggcaggca 407 | ||||||||| | || ||||||||||| ||||| Sbjct: 459 gctcatcaggcaaaggcatatcagggttggaaggca 494
>emb|BX829696.1|CNS0A1GO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 876 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 3 ctaccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtct 62 ||||||||||||||| ||||| |||||| |||| | ||||| || |||||||||||||| Sbjct: 58 ctaccgcaactatggaaagaccttcaagggaccacgtcgtccttacgagaaggagcgtct 117 Query: 63 ggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggag 122 ||| | ||| | |||||||| ||||||||||| ||| | |||||||||| ||||||| Sbjct: 118 tgattctgaattgaagctggttggtgagtatggtctgcgtaacaagcgtgagttctggag 177 Query: 123 ggtccagta 131 || ||||| Sbjct: 178 agtgcagta 186 Score = 67.9 bits (34), Expect = 2e-08 Identities = 138/173 (79%) Strand = Plus / Plus Query: 229 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 288 |||||||| || ||||| |||| |||| ||||| ||||||| ||||||||| | || || Sbjct: 284 atgaaccgttacgggcttcttgatgagagccagaacaagctcgattacgtcttggctttg 343 Query: 289 actgctgagaacttccttgcaaggcgccttcagactcttgncttcaaggctggcatggca 348 |||| ||||||||| |||| | || ||||||||| ||| |||||| |||| ||||| Sbjct: 344 actgttgagaactttcttgagcgtcgtcttcagactattgtgttcaagtctggtatggct 403 Query: 349 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttgg 401 ||||| ||||| || | |||||| | |||||||| | || ||||||||||| Sbjct: 404 aagtctatccatcactctcgtgtcctcatcaggcagaggcatatcagggttgg 456
>gb|AY389659.1| Hyacinthus orientalis 40S ribosomal protein S9 (RPS9) mRNA, complete cds Length = 800 Score = 75.8 bits (38), Expect = 1e-10 Identities = 230/294 (78%) Strand = Plus / Plus Query: 10 aactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgca 69 |||||||| ||||| || |||||||| | ||||||||||||||||| ||||| ||||| Sbjct: 60 aactatggcaagacctttaagaaacctcgccgtccctatgagaaggaacgtcttgatgct 119 Query: 70 gaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccag 129 || | ||||| || |||||||||||||| || |||| | ||||| |||||||| ||| Sbjct: 120 gagttgaagcttgttggtgagtatggactcagagccaagagggagctgtggagggtgcag 179 Query: 130 tatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactggatgagaagaat 189 |||| |||| || || || ||||| || ||||| | || || |||||||||| | | Sbjct: 180 tatgttctgagtagaatacgcaatgccgctaggcagctccttactctggatgagagggac 239 Query: 190 ccccgccgtatctttgagggtgcagctcttcttcgccgcatgaaccgctatgggctcctt 249 || |||||| | |||||||||| ||||| || || | ||| || ||||| || || Sbjct: 240 cctcgccgtgtatttgagggtgaggctctcctccgtaggatgcacaaatatggtcttctc 299 Query: 250 gctgagggccaggacaagcttgattacgtccttgccctgactgctgagaacttc 303 | ||||| ||| |||||||||||||||||||||| |||||| ||||||||| Sbjct: 300 gatgaggagcagaacaagcttgattacgtccttgcattgactgtagagaacttc 353
>gb|BT014007.1| Lycopersicon esculentum clone 133059F, mRNA sequence Length = 891 Score = 75.8 bits (38), Expect = 1e-10 Identities = 113/138 (81%) Strand = Plus / Plus Query: 4 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 63 |||||||||||||| ||||| || ||||| || | || || |||||||||||||| || Sbjct: 82 taccgcaactatgggaagacctttaagaagcctcgacgcccttatgagaaggagcgattg 141 Query: 64 gatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagg 123 |||||||| | ||||| || || || ||||| |||||||||||| | ||||| ||||| Sbjct: 142 gatgcagagttgaagcttgttggagaatatgggctgaggtgcaagagagagctttggaga 201 Query: 124 gtccagtatgcattgagc 141 || |||||||| |||||| Sbjct: 202 gttcagtatgccttgagc 219 Score = 54.0 bits (27), Expect = 4e-04 Identities = 92/114 (80%) Strand = Plus / Plus Query: 252 tgagggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaag 311 |||| ||||| ||||||||||||| ||| | ||||| |||| |||||||| |||| | Sbjct: 330 tgagagccagaacaagcttgattatgtcttggccctcactgtggagaactttcttgagcg 389 Query: 312 gcgccttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgc 365 || || || || || | ||||||| |||||||||| ||||| ||||||||||| Sbjct: 390 tcgtctccaaaccctcgtcttcaagactggcatggctaagtcaatccaccatgc 443
>gb|AC151815.1| Solanum demissum chromosome 5 clone PGEC472P22 map MAP_LOC, complete sequence Length = 136150 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 40 cgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactg 99 |||||||||||||||||| | |||||||||| | ||||| || || |||||||||||| Sbjct: 119884 cgtccctatgagaaggagaggttggatgcagagttgaagcttgttggagagtatggactg 119943 Query: 100 aggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgca 159 ||||||| | ||| | ||||| || |||||||| |||||| | ||| | ||||||||| Sbjct: 119944 cggtgcaaaagggagttgtggagagttcagtatgctttgagccgtatcaggaatgctgca 120003 Query: 160 ag 161 || Sbjct: 120004 ag 120005 Score = 48.1 bits (24), Expect = 0.023 Identities = 89/111 (80%) Strand = Plus / Plus Query: 252 tgagggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaag 311 |||| ||||| ||||||| ||||| ||| | || || |||| |||||||||||||| | | Sbjct: 120096 tgagagccagaacaagctcgattatgtcttggcactcactgttgagaacttccttgaacg 120155 Query: 312 gcgccttcagactcttgncttcaaggctggcatggcaaagtccatccacca 362 || || || || |||| |||||| |||||||||| ||||| || ||||| Sbjct: 120156 tcgtctgcaaacccttgtgttcaagactggcatggctaagtcaattcacca 120206
>emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BAC clone F8M21 (ESSA project) Length = 103996 Score = 67.9 bits (34), Expect = 2e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 14 atggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctggatgcagaac 73 |||| ||||| |||||| |||| | ||||| || |||||||||||||| ||| | ||| Sbjct: 39956 atggaaagaccttcaagggaccacgtcgtccttacgagaaggagcgtcttgattctgaat 39897 Query: 74 taaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagggtccagta 131 | |||||||| ||||||||||| ||| | |||||||||||||||||| || ||||| Sbjct: 39896 tgaagctggttggtgagtatggtctgcgtaacaagcgtgagctctggagagtgcagta 39839
>emb|BX829457.1|CNS0A1LQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZA11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 551 Score = 67.9 bits (34), Expect = 2e-08 Identities = 138/173 (79%) Strand = Plus / Plus Query: 229 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 288 |||||||| || ||||| |||| |||| ||||| ||||||| ||||||||| | || || Sbjct: 32 atgaaccgttacgggcttcttgatgagagccagaacaagctcgattacgtcttggctttg 91 Query: 289 actgctgagaacttccttgcaaggcgccttcagactcttgncttcaaggctggcatggca 348 |||| ||||||||| |||| | || ||||||||| ||| |||||| |||| ||||| Sbjct: 92 actgttgagaactttcttgagcgtcgtcttcagactattgtgttcaagtctggtatggct 151 Query: 349 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttgg 401 ||||| ||||| || | |||||| | |||||||| | || ||||||||||| Sbjct: 152 aagtctatccatcactctcgtgtcctcatcaggcagaggcatatcagggttgg 204
>gb|AF154636.1| Nicotiana tabacum clone PR5 mRNA sequence Length = 673 Score = 61.9 bits (31), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 316 cttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgc 365 ||||| ||||||| ||||||| |||||||||| ||||| ||||||||||| Sbjct: 218 cttcaaactcttgtcttcaagactggcatggctaagtcaatccaccatgc 267
>dbj|AB226106.1| Aspergillus oryzae cDNA, contig sequence: AoEST2963 Length = 800 Score = 60.0 bits (30), Expect = 6e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 349 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 408 |||||||||||||| ||||||||| |||||| ||| ||||||||| | || |||| |||| Sbjct: 406 aagtccatccaccacgcccgtgtcctgatcaagcagcgccacatccgcgtcggcaagcag 465 Query: 409 at 410 || Sbjct: 466 at 467
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 60.0 bits (30), Expect = 6e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 349 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 408 |||||||||||||| ||||||||| |||||| ||| ||||||||| | || |||| |||| Sbjct: 742513 aagtccatccaccacgcccgtgtcctgatcaagcagcgccacatccgcgtcggcaagcag 742454 Query: 409 at 410 || Sbjct: 742453 at 742452
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 172 acactggatgagaagaatccccgccgtatctttgagggtg 211 |||||||||||||||||||| || || ||||||||||||| Sbjct: 53973 acactggatgagaagaatcctcgtcggatctttgagggtg 54012 Score = 46.1 bits (23), Expect = 0.089 Identities = 104/131 (79%) Strand = Plus / Plus Query: 4 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 63 ||||| |||||||| || || |||||||| || | ||||| ||||||||||||||| | Sbjct: 53805 taccgaaactatggcaaaactttcaagaagcctcgtcgtccttatgagaaggagcgttta 53864 Query: 64 gatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagg 123 ||||| || | ||||| || || ||||| || || | |||||||| ||||| |||||| Sbjct: 53865 gatgctgagttgaagctcgtcggagagtacggtcttcgctgcaagcgcgagctttggagg 53924 Query: 124 gtccagtatgc 134 || || ||||| Sbjct: 53925 gttcaatatgc 53935
>emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22 on chromosome 3, complete sequence Length = 134390 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 172 acactggatgagaagaatccccgccgtatctttgagggtg 211 |||||||||||||||||||| || || ||||||||||||| Sbjct: 17265 acactggatgagaagaatcctcgtcggatctttgagggtg 17226 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 4 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgt 60 ||||| |||||||| || || |||||||| ||| | ||||| ||||||||||||||| Sbjct: 17433 taccgtaactatggcaaaactttcaagaagccacgtcgtccatatgagaaggagcgt 17377 Score = 46.1 bits (23), Expect = 0.089 Identities = 115/146 (78%) Strand = Plus / Minus Query: 263 acaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggcgccttcaga 322 ||||||||||||| || | || || |||| |||||| || |||| | | || ||||||| Sbjct: 17174 acaagcttgattatgtgttggctctcactgttgagaattttcttgaacgtcgtcttcaga 17115 Query: 323 ctcttgncttcaaggctggcatggcaaagtccatccaccatgcccgtgtcttgatcaggc 382 |||||| ||||| |||||||||| ||||| || || ||||| | || | ||||||| Sbjct: 17114 ctcttgtgttcaaatctggcatggctaagtctattcatcatgctagggttctaatcaggc 17055 Query: 383 aacgccacatcagggttggcaggcag 408 | | |||||||||||||| |||||| Sbjct: 17054 agaggcacatcagggttgggaggcag 17029
>emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 on chromosome 3, complete sequence Length = 122557 Score = 54.0 bits (27), Expect = 4e-04 Identities = 105/131 (80%) Strand = Plus / Minus Query: 4 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 63 ||||| |||||||| || || |||||||| ||| | ||||| ||||||||||| ||| || Sbjct: 106082 taccgtaactatggcaaaactttcaagaagccacgtcgtccatatgagaaggaacgtttg 106023 Query: 64 gatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagg 123 ||||| || | ||||| || || ||||| || || | |||||||| ||||| |||||| Sbjct: 106022 gatgctgagttgaagctcgtcggagagtacggtcttcgctgcaagcgcgagctttggagg 105963 Query: 124 gtccagtatgc 134 || || ||||| Sbjct: 105962 gttcaatatgc 105952 Score = 54.0 bits (27), Expect = 4e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 4 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 63 ||||| |||||||| || || |||||||| ||| | ||||| ||||||||||||||| | Sbjct: 98808 taccgaaactatggcaaaactttcaagaagccacgtcgtccttatgagaaggagcgttta 98867 Query: 64 gatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctggagg 123 ||||| || | ||||| || || ||||| || || | |||||||| ||||| |||||| Sbjct: 98868 gatgctgagttgaagctcgtcggagagtacggtcttcgctgcaagcgcgagctttggagg 98927 Query: 124 gtccagtatgc 134 || || ||||| Sbjct: 98928 gttcaatatgc 98938 Score = 46.1 bits (23), Expect = 0.089 Identities = 43/50 (86%) Strand = Plus / Minus Query: 316 cttcagactcttgncttcaaggctggcatggcaaagtccatccaccatgc 365 ||||||||||||| ||||| |||||||||| ||||| || |||||||| Sbjct: 105770 cttcagactcttgtgttcaaatctggcatggctaagtctattcaccatgc 105721
>ref|XM_533590.2| PREDICTED: Canis familiaris similar to 40S ribosomal protein S9 (LOC476387), mRNA Length = 696 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggt 398 |||| ||||||||||||||||||||||| ||||| | || ||||| |||||||| Sbjct: 385 tggccaagtccatccaccatgcccgtgtgctgatccgccagcgccatatcagggt 439
>ref|XM_657315.1| Aspergillus nidulans FGSC A4 40S ribosomal protein S9 (AN4803.2), mRNA Length = 582 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 349 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 408 |||||||||||||| ||||||||| |||||| ||| || |||||| | || |||| |||| Sbjct: 358 aagtccatccaccacgcccgtgtcctgatcaagcagcgtcacatccgtgtcggcaagcag 417 Query: 409 at 410 || Sbjct: 418 at 419
>dbj|AU066528.1| Chlamydomonas sp. HS-5 mRNA for 40S ribosomal protein S9, NaCl inducible, complete cds, clone:NaEX96-107 Length = 648 Score = 50.1 bits (25), Expect = 0.006 Identities = 94/117 (80%) Strand = Plus / Plus Query: 4 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 63 |||||||||||||| ||||| |||||||| || |||| || | ||||||||||| || Sbjct: 23 taccgcaactatggaaagacgttcaagaagccgcggcgcccattcgagaaggagcgcctc 82 Query: 64 gatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctctgg 120 |||| || || ||||| ||||| |||||||| ||| | |||||| ||||||||| Sbjct: 83 gatggcgagctgaagcttgtgggcgagtatggcctgcgcaacaagcgcgagctctgg 139
>ref|XM_613451.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 1 (LOC533892), mRNA Length = 946 Score = 46.1 bits (23), Expect = 0.089 Identities = 47/55 (85%) Strand = Plus / Plus Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggt 398 |||| |||||||||||||| |||||||| | ||| | || |||||||||||||| Sbjct: 648 tggccaagtccatccaccacgcccgtgtgctcatccgccagcgccacatcagggt 702
>ref|XM_872766.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 9 (LOC533892), mRNA Length = 766 Score = 46.1 bits (23), Expect = 0.089 Identities = 47/55 (85%) Strand = Plus / Plus Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggt 398 |||| |||||||||||||| |||||||| | ||| | || |||||||||||||| Sbjct: 468 tggccaagtccatccaccacgcccgtgtgctcatccgccagcgccacatcagggt 522
>ref|XM_864261.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 3 (LOC533892), mRNA Length = 738 Score = 46.1 bits (23), Expect = 0.089 Identities = 47/55 (85%) Strand = Plus / Plus Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggt 398 |||| |||||||||||||| |||||||| | ||| | || |||||||||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgtgctcatccgccagcgccacatcagggt 494
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 46.1 bits (23), Expect = 0.089 Identities = 32/35 (91%) Strand = Plus / Minus Query: 358 caccatgcccgtgtcttgatcaggcaacgccacat 392 |||||||| ||||||||||| ||||||| |||||| Sbjct: 131747 caccatgctcgtgtcttgattaggcaacaccacat 131713
>emb|BX841622.1|CNS09YLT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 876 Score = 46.1 bits (23), Expect = 0.089 Identities = 41/47 (87%) Strand = Plus / Plus Query: 49 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatgg 95 |||||||||||||| ||| | ||| | |||||||| ||||||||||| Sbjct: 104 gagaaggagcgtcttgattctgaattgaagctggttggtgagtatgg 150
>gb|BC076696.1| Xenopus tropicalis ribosomal protein S9, mRNA (cDNA clone MGC:79756 IMAGE:6984164), complete cds Length = 780 Score = 44.1 bits (22), Expect = 0.35 Identities = 43/50 (86%) Strand = Plus / Plus Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatc 393 |||||||||||||||| |||||||| || ||||||| ||| | |||||| Sbjct: 384 tggcaaagtccatccatcatgcccgcgtgctgatcagacaaaggcacatc 433
>ref|NM_001006812.1| Xenopus tropicalis ribosomal protein S9 (rps9), mRNA Length = 780 Score = 44.1 bits (22), Expect = 0.35 Identities = 43/50 (86%) Strand = Plus / Plus Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatc 393 |||||||||||||||| |||||||| || ||||||| ||| | |||||| Sbjct: 384 tggcaaagtccatccatcatgcccgcgtgctgatcagacaaaggcacatc 433
>emb|CR760722.2| Xenopus tropicalis finished cDNA, clone TGas113k07 Length = 683 Score = 44.1 bits (22), Expect = 0.35 Identities = 43/50 (86%) Strand = Plus / Plus Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatc 393 |||||||||||||||| |||||||| || ||||||| ||| | |||||| Sbjct: 361 tggcaaagtccatccatcatgcccgcgtgctgatcagacaaaggcacatc 410
>ref|XM_872464.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 7 (LOC533892), mRNA Length = 740 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 396 |||| |||||||||||||| |||||||| | ||| | || |||||||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgtgctcatccgccagcgccacatcagg 492
>ref|XM_872355.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 6 (LOC533892), mRNA Length = 727 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 396 |||| |||||||||||||| |||||||| | ||| | || |||||||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgtgctcatccgccagcgccacatcagg 492
>gb|BC073375.1| Xenopus laevis MGC80804 protein, mRNA (cDNA clone MGC:80804 IMAGE:5513712), complete cds Length = 890 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcag 380 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 570 tggccaagtccatccatcatgcccgtgtgctgatcag 606
>gb|BC041242.1| Xenopus laevis ribosomal protein S9, mRNA (cDNA clone MGC:52774 IMAGE:4684220), complete cds Length = 698 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 344 tggcaaagtccatccaccatgcccgtgtcttgatcag 380 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 380 tggccaagtccatccatcatgcccgtgtgctgatcag 416
>gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete sequence Length = 129327 Score = 42.1 bits (21), Expect = 1.4 Identities = 54/65 (83%) Strand = Plus / Plus Query: 4 taccgcaactatggtaagacattcaagaaaccaaggcgtccctatgagaaggagcgtctg 63 ||||| |||||||| || || |||||||| || | ||||| || |||||||||||| || Sbjct: 49313 taccgaaactatggcaaaactttcaagaagccccgtcgtccatacgagaaggagcgtttg 49372 Query: 64 gatgc 68 ||||| Sbjct: 49373 gatgc 49377 Score = 40.1 bits (20), Expect = 5.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 172 acactggatgagaagaatccccgccgtatctttgagggtgcagctctt 219 ||||||||||| ||||| || || || ||||| ||||||| ||||||| Sbjct: 49481 acactggatgaaaagaaccctcgtcggatcttcgagggtgaagctctt 49528
>gb|AF402817.1| Ictalurus punctatus 40S ribosomal protein S9 mRNA, complete cds Length = 677 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 85 ggtgagtatggactgaggtgcaagcgtgagctctggagggt 125 ||||||||||| |||||| ||||||||| |||||||||| Sbjct: 111 ggtgagtatggtctgaggaataagcgtgaggtctggagggt 151
>gb|AY769323.1| Bombyx mori ribosomal protein S9 (RpS9) mRNA, complete cds Length = 686 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 331 ttcaaggctggcatggcaaagtccatccaccatgcc 366 ||||| |||||| |||| ||||||||||| |||||| Sbjct: 400 ttcaaagctggcctggcgaagtccatccatcatgcc 435
>gb|BC080433.1| Xenopus laevis MGC86539 protein, mRNA (cDNA clone MGC:86539 IMAGE:3399194), complete cds Length = 2281 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gctccttgctgagggccagg 262 |||||||||||||||||||| Sbjct: 661 gctccttgctgagggccagg 642
>ref|XM_872555.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 8 (LOC533892), mRNA Length = 910 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 344 tggcaaagtccatccaccatgcccgtgt 371 |||| |||||||||||||| |||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgt 467
>ref|XM_872145.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 4 (LOC533892), mRNA Length = 1356 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 344 tggcaaagtccatccaccatgcccgtgt 371 |||| |||||||||||||| |||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgt 467
>ref|XM_366876.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02952.4) partial mRNA Length = 576 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 aagtccatccaccatgcccgtgtc 372 |||||||||||||| ||||||||| Sbjct: 352 aagtccatccaccacgcccgtgtc 375
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 cgccgcatgaaccgctatgg 242 |||||||||||||||||||| Sbjct: 1691114 cgccgcatgaaccgctatgg 1691095
>gb|AC009470.4| Homo sapiens BAC clone RP11-125K7 from 11, complete sequence Length = 162511 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ttgccctgactgctgagaac 300 |||||||||||||||||||| Sbjct: 14871 ttgccctgactgctgagaac 14890
>dbj|AP001266.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-770G2, complete sequence Length = 175872 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ttgccctgactgctgagaac 300 |||||||||||||||||||| Sbjct: 106983 ttgccctgactgctgagaac 107002 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,229,517 Number of Sequences: 3902068 Number of extensions: 3229517 Number of successful extensions: 68583 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 68318 Number of HSP's gapped (non-prelim): 248 length of query: 411 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 389 effective length of database: 17,147,199,772 effective search space: 6670260711308 effective search space used: 6670260711308 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
