ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags25a23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ139266.1| Triticum aestivum gamma tocopherol methyltransfer... 482 e-133
2gb|BT009496.1| Triticum aestivum clone wr1.pk0077.f1:fis, full i... 452 e-124
3ref|XM_467331.1| Oryza sativa (japonica cultivar-group), mRNA 139 1e-29
4ref|XM_506924.1| PREDICTED Oryza sativa (japonica cultivar-group... 139 1e-29
5gb|DQ456878.1| Oryza sativa gamma-tocopherol methyltransferase (... 139 1e-29
6dbj|AK071763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
7dbj|AK061746.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
8gb|DQ456879.1| Zea mays gamma-tocopherol methyltransferase (TMT)... 115 1e-22
9gb|AY109799.1| Zea mays CL364_1 mRNA sequence 107 3e-20
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
11dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
12gb|DQ456880.1| Gossypium hirsutum gamma-tocopherol methyltransfe... 66 1e-07
13gb|DQ456877.1| Solanum tuberosum gamma-tocopherol methyltransfer... 66 1e-07
14gb|DQ456876.1| Lycopersicon esculentum gamma-tocopherol methyltr... 66 1e-07
15gb|AF213481.1|AF213481 Perilla frutescens gamma-tocopherol methy... 66 1e-07
16gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725... 54 5e-04
17gb|DQ229834.1| Helianthus annuus cultivar RHA801 gamma-tocophero... 46 0.11
18gb|DQ229833.1| Helianthus annuus cultivar LG24 gamma-tocopherol ... 46 0.11
19ref|XM_472495.1| Oryza sativa (japonica cultivar-group), predic... 42 1.7
20emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 1.7
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
22emb|BX571681.7| Zebrafish DNA sequence from clone DKEY-73N10 in ... 42 1.7
23dbj|AK070730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
24gb|AC133880.7| Mus musculus chromosome 15, clone RP24-142B13, co... 40 6.8
25gb|AC092218.2| Drosophila melanogaster clone BACR12B06, complete... 40 6.8
26gb|AC147091.2| Pan troglodytes BAC clone RP43-57O16 from 7, comp... 40 6.8
27gb|AC002124.2| Homo sapiens BAC clone CTB-180O1 from 7, complete... 40 6.8
28gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome... 40 6.8
29gb|AC121888.3| Mus musculus BAC clone RP24-142M5 from chromosome... 40 6.8
30gb|AC145920.1| Pan troglodytes BAC clone RP43-10C15 from 7, comp... 40 6.8
31emb|Z82194.1|HS272J12 Human DNA sequence from clone RP1-272J12 o... 40 6.8
32emb|AL589685.17| Human DNA sequence from clone RP11-443G18 on ch... 40 6.8
33gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome... 40 6.8
34gb|AC095029.3| Homo sapiens chromosome 3 clone RP11-208J17, comp... 40 6.8
35ref|NM_057437.2| Drosophila melanogaster Vitelline membrane 34Ca... 40 6.8
36gb|AC107624.1| Homo sapiens chromosome 3 clone RP11-744H21, comp... 40 6.8
37gb|BT023245.1| Drosophila melanogaster IP02756 full insert cDNA 40 6.8
38gb|AC127285.4| Mus musculus BAC clone RP23-336P20 from chromosom... 40 6.8
39gb|AC149606.6| Mus musculus BAC clone RP23-466P2 from 7, complet... 40 6.8
40gb|AE003640.4| Drosophila melanogaster chromosome 2L, section 49... 40 6.8
41gb|AC005656.1|AC005656 Drosophila melanogaster, chromosome 2R, r... 40 6.8
42gb|AC002327.1|AC002327 Mus musculus chromosome 7, clone 19K5, co... 40 6.8
43emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on ch... 40 6.8
44gb|DQ279878.1| Melampsora lini hesp-379 mRNA, complete cds 40 6.8
45gb|L08852.1|DROVM34CA Drosophila melanogaster vitelline membrane... 40 6.8
46emb|AL773523.4| Mouse DNA sequence from clone RP23-186B18 on chr... 40 6.8
47emb|AL591952.9| Mouse DNA sequence from clone RP23-25N17 on chro... 40 6.8
48emb|X01802.1|DMVIT1 Drosophila melanogaster mRNA fragment for vi... 40 6.8
49gb|M11408.1|MUSRPS16 Mouse S16 ribosomal protein gene, complete cds 40 6.8 
>gb|DQ139266.1| Triticum aestivum gamma tocopherol methyltransferase mRNA, complete
            cds
          Length = 1288

 Score =  482 bits (243), Expect = e-133
 Identities = 337/366 (92%), Gaps = 3/366 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaaaacgtggccccgttttggcctgctgtcatccaatcagcactgacatggaaaggcctc 61
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903  gaaaacgtggccccgttctggcctgctgtcatccaatcagcactgacatggaaaggcctc 962

                                                                        
Query: 62   acttctctactaaggagtggatggaagacgataaagggagcactggtgatgcctctcatg 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963  acttctctactaaggagtggatggaagacgataaagggagcactggtgatgcctctcatg 1022

                                                                        
Query: 122  atccaaggctacaagaaaggcctgatcaagttcaccatcatcacctgccgcaaaccccaa 181
            ||||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||
Sbjct: 1023 atccaaggctacaagaaaggcctcattaagttcagcatcatcacctgccacaaaccccaa 1082

                                                                        
Query: 182  gcagtcacagaaggagaagctgagaccgcatcgcc--tagtgtagaatagaacccatgtg 239
            |||| || |||||||||| ||||| ||||||||||   ||||||||||||||||||||||
Sbjct: 1083 gcagccatagaaggagaacctgaggccgcatcgcccagagtgtagaatagaacccatgtg 1142

                                                                        
Query: 240  attgaggtacactcagcgtgctgccgccttgtagctgaaaattttcgtgttaccatgcct 299
            ||||   || |||| || ||||| ||||||||||||||| | |||||||||||| |||||
Sbjct: 1143 attggaatagactcggcttgctgtcgccttgtagctgaataatttcgtgttaccgtgcct 1202

                                                                        
Query: 300  atgtacctgcaactgcaagtgccatatgaaaagtggtttctaaagcaaaattctcttcag 359
             |||| ||||||||| ||||||||||||| || ||||| |||||||||||||||| ||||
Sbjct: 1203 ctgtatctgcaactggaagtgccatatgagaa-tggttcctaaagcaaaattctcctcag 1261

                  
Query: 360  attcat 365
            ||||||
Sbjct: 1262 attcat 1267
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>gb|BT009496.1| Triticum aestivum clone wr1.pk0077.f1:fis, full insert mRNA sequence
          Length = 1024

 Score =  452 bits (228), Expect = e-124
 Identities = 319/348 (91%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaaaacgtggccccgttttggcctgctgtcatccaatcagcactgacatggaaaggcctc 61
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658  gaaaacgtggccccgttctggcctgctgtcatccaatcagcactgacatggaaaggcctc 717

                                                                        
Query: 62   acttctctactaaggagtggatggaagacgataaagggagcactggtgatgcctctcatg 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718  acttctctactaaggagtggatggaagacgataaagggagcactggtgatgcctctcatg 777

                                                                        
Query: 122  atccaaggctacaagaaaggcctgatcaagttcaccatcatcacctgccgcaaaccccaa 181
            ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||
Sbjct: 778  atccaaggctacaagaaaggcctcattaagttcagcatcatcacctgccgcaaaccccaa 837

                                                                        
Query: 182  gcagtcacagaaggagaagctgagaccgcatcgcctagtgtagaatagaacccatgtgat 241
            |||| || |||||||||| ||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 838  gcagccatagaaggagaacctgaggccgcatcgcccagtgtagaatagaacccatgtgat 897

                                                                        
Query: 242  tgaggtacactcagcgtgctgccgccttgtagctgaaaattttcgtgttaccatgcctat 301
            ||   || |||| || ||||| ||||| ||||||||| | ||| |||||||| ||||| |
Sbjct: 898  tggaatagactcggcttgctgtcgcctcgtagctgaataattttgtgttaccgtgcctct 957

                                                            
Query: 302  gtacctgcaactgcaagtgccatatgaaaagtggtttctaaagcaaaa 349
             || ||||||||| ||||| |||| | ||||||||| |||||||||||
Sbjct: 958  ctatctgcaactggaagtggcata-ggaaagtggttcctaaagcaaaa 1004
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>ref|XM_467331.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1301

 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Plus

                                                                        
Query: 5    aacgtggccccgttttggcctgctgtcatccaatcagcactgacatggaaaggcctcact 64
            ||||| ||||| || |||||||| || ||  |||||||| |||||||||||||  | |||
Sbjct: 921  aacgtcgccccattctggcctgcggttataaaatcagcattgacatggaaaggtttaact 980

                                                                        
Query: 65   tctctactaaggagtggatggaagacgataaagggagcactggtgatgcctctcatgatc 124
            ||||| ||||| ||||| |||||||||||||  || ||| ||||||||||||| ||||||
Sbjct: 981  tctctgctaagaagtgggtggaagacgataagaggtgcaatggtgatgcctctgatgatc 1040

                                                              
Query: 125  caaggctacaagaaaggcctgatcaagttcaccatcatcacctgccgcaa 174
             |||| ||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 1041 gaaggatacaagaaagggctcatcaaattcaccatcatcacctgtcgcaa 1090
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>ref|XM_506924.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1111_E07.25 mRNA
          Length = 1432

 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Plus

                                                                        
Query: 5    aacgtggccccgttttggcctgctgtcatccaatcagcactgacatggaaaggcctcact 64
            ||||| ||||| || |||||||| || ||  |||||||| |||||||||||||  | |||
Sbjct: 922  aacgtcgccccattctggcctgcggttataaaatcagcattgacatggaaaggtttaact 981

                                                                        
Query: 65   tctctactaaggagtggatggaagacgataaagggagcactggtgatgcctctcatgatc 124
            ||||| ||||| ||||| |||||||||||||  || ||| ||||||||||||| ||||||
Sbjct: 982  tctctgctaagaagtgggtggaagacgataagaggtgcaatggtgatgcctctgatgatc 1041

                                                              
Query: 125  caaggctacaagaaaggcctgatcaagttcaccatcatcacctgccgcaa 174
             |||| ||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 1042 gaaggatacaagaaagggctcatcaaattcaccatcatcacctgtcgcaa 1091
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>gb|DQ456878.1| Oryza sativa gamma-tocopherol methyltransferase (TMT) mRNA, complete
            cds
          Length = 1432

 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Plus

                                                                        
Query: 5    aacgtggccccgttttggcctgctgtcatccaatcagcactgacatggaaaggcctcact 64
            ||||| ||||| || |||||||| || ||  |||||||| |||||||||||||  | |||
Sbjct: 922  aacgtcgccccattctggcctgcggttataaaatcagcattgacatggaaaggtttaact 981

                                                                        
Query: 65   tctctactaaggagtggatggaagacgataaagggagcactggtgatgcctctcatgatc 124
            ||||| ||||| ||||| |||||||||||||  || ||| ||||||||||||| ||||||
Sbjct: 982  tctctgctaagaagtgggtggaagacgataagaggtgcaatggtgatgcctctgatgatc 1041

                                                              
Query: 125  caaggctacaagaaaggcctgatcaagttcaccatcatcacctgccgcaa 174
             |||| ||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 1042 gaaggatacaagaaagggctcatcaaattcaccatcatcacctgtcgcaa 1091
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>dbj|AK071763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110C23, full
            insert sequence
          Length = 1432

 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Plus

                                                                        
Query: 5    aacgtggccccgttttggcctgctgtcatccaatcagcactgacatggaaaggcctcact 64
            ||||| ||||| || |||||||| || ||  |||||||| |||||||||||||  | |||
Sbjct: 922  aacgtcgccccattctggcctgcggttataaaatcagcattgacatggaaaggtttaact 981

                                                                        
Query: 65   tctctactaaggagtggatggaagacgataaagggagcactggtgatgcctctcatgatc 124
            ||||| ||||| ||||| |||||||||||||  || ||| ||||||||||||| ||||||
Sbjct: 982  tctctgctaagaagtgggtggaagacgataagaggtgcaatggtgatgcctctgatgatc 1041

                                                              
Query: 125  caaggctacaagaaaggcctgatcaagttcaccatcatcacctgccgcaa 174
             |||| ||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 1042 gaaggatacaagaaagggctcatcaaattcaccatcatcacctgtcgcaa 1091
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>dbj|AK061746.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F12, full
            insert sequence
          Length = 1301

 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Plus

                                                                        
Query: 5    aacgtggccccgttttggcctgctgtcatccaatcagcactgacatggaaaggcctcact 64
            ||||| ||||| || |||||||| || ||  |||||||| |||||||||||||  | |||
Sbjct: 921  aacgtcgccccattctggcctgcggttataaaatcagcattgacatggaaaggtttaact 980

                                                                        
Query: 65   tctctactaaggagtggatggaagacgataaagggagcactggtgatgcctctcatgatc 124
            ||||| ||||| ||||| |||||||||||||  || ||| ||||||||||||| ||||||
Sbjct: 981  tctctgctaagaagtgggtggaagacgataagaggtgcaatggtgatgcctctgatgatc 1040

                                                              
Query: 125  caaggctacaagaaaggcctgatcaagttcaccatcatcacctgccgcaa 174
             |||| ||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 1041 gaaggatacaagaaagggctcatcaaattcaccatcatcacctgtcgcaa 1090
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>gb|DQ456879.1| Zea mays gamma-tocopherol methyltransferase (TMT) mRNA, complete cds
          Length = 1310

 Score =  115 bits (58), Expect = 1e-22
 Identities = 142/170 (83%)
 Strand = Plus / Plus

                                                                        
Query: 5    aacgtggccccgttttggcctgctgtcatccaatcagcactgacatggaaaggcctcact 64
            |||||||||||||||||||| || || ||  ||||||| || |||||||| ||| |||| 
Sbjct: 943  aacgtggccccgttttggcccgccgtgataaaatcagcgctaacatggaagggcttcacc 1002

                                                                        
Query: 65   tctctactaaggagtggatggaagacgataaagggagcactggtgatgcctctcatgatc 124
            ||||| || | ||  |||||||||||||| |  || ||  |||||||||| || ||||||
Sbjct: 1003 tctctgctgacgaccggatggaagacgatcagaggcgcgatggtgatgccgctaatgatc 1062

                                                              
Query: 125  caaggctacaagaaaggcctgatcaagttcaccatcatcacctgccgcaa 174
            || ||||||||||| ||||| ||||| ||||||||||||||||| |||||
Sbjct: 1063 cagggctacaagaagggcctcatcaaattcaccatcatcacctgtcgcaa 1112
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>gb|AY109799.1| Zea mays CL364_1 mRNA sequence
          Length = 1304

 Score =  107 bits (54), Expect = 3e-20
 Identities = 141/170 (82%)
 Strand = Plus / Plus

                                                                        
Query: 5    aacgtggccccgttttggcctgctgtcatccaatcagcactgacatggaaaggcctcact 64
            |||||||||||||||||||| || || ||  ||||||| || |||||||| ||| |||| 
Sbjct: 925  aacgtggccccgttttggcccgccgtgataaaatcagcgctaacatggaagggcttcacc 984

                                                                        
Query: 65   tctctactaaggagtggatggaagacgataaagggagcactggtgatgcctctcatgatc 124
            ||||| || | ||  |||||||||||||| |  || ||  |||||||||| || ||||||
Sbjct: 985  tctctgctgacgaccggatggaagacgatcagaggcgcgatggtgatgccgctaatgatc 1044

                                                              
Query: 125  caaggctacaagaaaggcctgatcaagttcaccatcatcacctgccgcaa 174
            || ||||||||||| || || ||||| ||||||||||||||||| |||||
Sbjct: 1045 cagggctacaagaaggggctcatcaaattcaccatcatcacctgtcgcaa 1094
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                            
Query: 83       tggaagacgataaagggagcactggtgatgcctctcatgatccaaggctacaagaaaggc 142
                |||||||||||||  || ||| ||||||||||||| |||||| |||| ||||||||||| 
Sbjct: 28915609 tggaagacgataagaggtgcaatggtgatgcctctgatgatcgaaggatacaagaaaggg 28915668

                                                
Query: 143      ctgatcaagttcaccatcatcacctgccgcaa 174
                || ||||| ||||||||||||||||| |||||
Sbjct: 28915669 ctcatcaaattcaccatcatcacctgtcgcaa 28915700



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                            
Query: 5        aacgtggccccgttttggcctgctgtcatccaatcagcactgacatggaaaggcctcact 64
                ||||| ||||| || |||||||| || ||  |||||||| |||||||||||||  | |||
Sbjct: 28915431 aacgtcgccccattctggcctgcggttataaaatcagcattgacatggaaaggtttaact 28915490

                                 
Query: 65       tctctactaaggagtgg 81
                ||||| ||||| |||||
Sbjct: 28915491 tctctgctaagaagtgg 28915507
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>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1111_E07
          Length = 123613

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                          
Query: 83     tggaagacgataaagggagcactggtgatgcctctcatgatccaaggctacaagaaaggc 142
              |||||||||||||  || ||| ||||||||||||| |||||| |||| ||||||||||| 
Sbjct: 108301 tggaagacgataagaggtgcaatggtgatgcctctgatgatcgaaggatacaagaaaggg 108360

                                              
Query: 143    ctgatcaagttcaccatcatcacctgccgcaa 174
              || ||||| ||||||||||||||||| |||||
Sbjct: 108361 ctcatcaaattcaccatcatcacctgtcgcaa 108392



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                          
Query: 5      aacgtggccccgttttggcctgctgtcatccaatcagcactgacatggaaaggcctcact 64
              ||||| ||||| || |||||||| || ||  |||||||| |||||||||||||  | |||
Sbjct: 108123 aacgtcgccccattctggcctgcggttataaaatcagcattgacatggaaaggtttaact 108182

                               
Query: 65     tctctactaaggagtgg 81
              ||||| ||||| |||||
Sbjct: 108183 tctctgctaagaagtgg 108199
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>gb|DQ456880.1| Gossypium hirsutum gamma-tocopherol methyltransferase (TMT) mRNA,
            complete cds
          Length = 1384

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 114/141 (80%)
 Strand = Plus / Plus

                                                                        
Query: 38   tcagcactgacatggaaaggcctcacttctctactaaggagtggatggaagacgataaag 97
            |||||| |||||||||| ||| |||| || || ||| | |||||||  || || ||||| 
Sbjct: 1014 tcagcattgacatggaagggcttcacatcactgctacgaagtggattaaaaacaataaaa 1073

                                                                        
Query: 98   ggagcactggtgatgcctctcatgatccaaggctacaagaaaggcctgatcaagttcacc 157
            || ||||| ||||||||  | ||||||||||| ||| |||||||  |||| |||||| | 
Sbjct: 1074 ggtgcactagtgatgccattgatgatccaagggtaccagaaaggggtgataaagttcgct 1133

                                 
Query: 158  atcatcacctgccgcaaaccc 178
            |||||||| ||||| ||||||
Sbjct: 1134 atcatcacatgccggaaaccc 1154
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>gb|DQ456877.1| Solanum tuberosum gamma-tocopherol methyltransferase (TMT) mRNA,
            complete cds
          Length = 1396

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 120/149 (80%)
 Strand = Plus / Plus

                                                                        
Query: 17   ttttggcctgctgtcatccaatcagcactgacatggaaaggcctcacttctctactaagg 76
            |||||||| || |||||  | ||||||||||||||||| ||| |||| ||  ||||| | 
Sbjct: 1043 ttttggccagcagtcataaagtcagcactgacatggaagggcttcacatcagtactacgc 1102

                                                                        
Query: 77   agtggatggaagacgataaagggagcactggtgatgcctctcatgatccaaggctacaag 136
            |||||||||||||| || || |  |||||||  ||||| || |||||  |||| ||||||
Sbjct: 1103 agtggatggaagacaatcaaagctgcactggcaatgccactgatgattgaaggatacaag 1162

                                         
Query: 137  aaaggcctgatcaagttcaccatcatcac 165
            ||||| || ||||| ||  ||||||||||
Sbjct: 1163 aaaggtctcatcaaatttgccatcatcac 1191
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>gb|DQ456876.1| Lycopersicon esculentum gamma-tocopherol methyltransferase (TMT)
            mRNA, complete cds
          Length = 1354

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 120/149 (80%)
 Strand = Plus / Plus

                                                                        
Query: 17   ttttggcctgctgtcatccaatcagcactgacatggaaaggcctcacttctctactaagg 76
            |||||||| || |||||  | ||||||||||||||||| ||| |||| ||  ||||| | 
Sbjct: 939  ttttggccagcagtcataaagtcagcactgacatggaagggcttcacatcagtactacgc 998

                                                                        
Query: 77   agtggatggaagacgataaagggagcactggtgatgcctctcatgatccaaggctacaag 136
            |||||||||||||| || || |  |||||||  ||||| || |||||  |||| ||||||
Sbjct: 999  agtggatggaagacaatcaaagctgcactggcaatgccactgatgattgaaggatacaag 1058

                                         
Query: 137  aaaggcctgatcaagttcaccatcatcac 165
            ||||| || ||||| ||  ||||||||||
Sbjct: 1059 aaaggtctcatcaaatttgccatcatcac 1087
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>gb|AF213481.1|AF213481 Perilla frutescens gamma-tocopherol methyltransferase (TMT) mRNA,
            complete cds
          Length = 1369

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 108/133 (81%)
 Strand = Plus / Plus

                                                                        
Query: 45   tgacatggaaaggcctcacttctctactaaggagtggatggaagacgataaagggagcac 104
            |||||||||| ||| | || || || |||||||| ||||||||||| ||||  |||||| 
Sbjct: 1056 tgacatggaagggcataacctcactgctaaggagcggatggaagactataagaggagcaa 1115

                                                                        
Query: 105  tggtgatgcctctcatgatccaaggctacaagaaaggcctgatcaagttcaccatcatca 164
            ||||||||||  | |||||| |||| || ||||| ||| ||||||| ||  ||||||| |
Sbjct: 1116 tggtgatgccattgatgatcgaaggatataagaagggcgtgatcaaatttgccatcatta 1175

                         
Query: 165  cctgccgcaaacc 177
            | ||||| |||||
Sbjct: 1176 catgccgaaaacc 1188
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>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region
          Length = 108553

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 120   tgatccaaggctacaagaaaggcctgatcaagttcaccatcatcacctgccgcaa 174
             ||||||||||||||| ||| || || ||||| |||||  ||||||||||||||||
Sbjct: 92891 tgatccaaggctacaggaaggggctcatcaaattcacagtcatcacctgccgcaa 92837
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>gb|DQ229834.1| Helianthus annuus cultivar RHA801 gamma-tocopherol methyltransferase
            (gamma-TMT) gene, complete cds
          Length = 4304

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 8    gtggccccgttttggcctgctgt 30
            |||||||||||||||||||||||
Sbjct: 3007 gtggccccgttttggcctgctgt 3029
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>gb|DQ229833.1| Helianthus annuus cultivar LG24 gamma-tocopherol methyltransferase
            (gamma-TMT) gene, complete sequence
          Length = 4304

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 8    gtggccccgttttggcctgctgt 30
            |||||||||||||||||||||||
Sbjct: 3007 gtggccccgttttggcctgctgt 3029
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>ref|XM_472495.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1617

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 305 cctgcaactgcaagtgccata 325
           |||||||||||||||||||||
Sbjct: 948 cctgcaactgcaagtgccata 928
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>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16,
             complete sequence
          Length = 163738

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 305   cctgcaactgcaagtgccata 325
             |||||||||||||||||||||
Sbjct: 88797 cctgcaactgcaagtgccata 88777
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 305      cctgcaactgcaagtgccata 325
                |||||||||||||||||||||
Sbjct: 21275323 cctgcaactgcaagtgccata 21275303
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>emb|BX571681.7| Zebrafish DNA sequence from clone DKEY-73N10 in linkage group 18,
             complete sequence
          Length = 184543

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    ctgacatggaaaggcctcact 64
             |||||||||||||||||||||
Sbjct: 84121 ctgacatggaaaggcctcact 84141
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>dbj|AK070730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063K10, full
            insert sequence
          Length = 2705

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 305  cctgcaactgcaagtgccata 325
            |||||||||||||||||||||
Sbjct: 1753 cctgcaactgcaagtgccata 1733
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>gb|AC133880.7| Mus musculus chromosome 15, clone RP24-142B13, complete sequence
          Length = 135091

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   atccaatcagcactgacatg 51
            ||||||||||||||||||||
Sbjct: 7298 atccaatcagcactgacatg 7279
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>gb|AC092218.2| Drosophila melanogaster clone BACR12B06, complete sequence
          Length = 164565

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 461    catgttgattggttgatgat 480
              ||||||||||||||||||||
Sbjct: 123800 catgttgattggttgatgat 123781
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>gb|AC147091.2| Pan troglodytes BAC clone RP43-57O16 from 7, complete sequence
          Length = 170233

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    acagaaggagaagctgagac 207
              ||||||||||||||||||||
Sbjct: 134062 acagaaggagaagctgagac 134081
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>gb|AC002124.2| Homo sapiens BAC clone CTB-180O1 from 7, complete sequence
          Length = 100923

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   acagaaggagaagctgagac 207
             ||||||||||||||||||||
Sbjct: 47347 acagaaggagaagctgagac 47328
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>gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome 1, complete sequence
          Length = 163778

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   tcttttggttacatccatcg 392
             ||||||||||||||||||||
Sbjct: 46086 tcttttggttacatccatcg 46105
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>gb|AC121888.3| Mus musculus BAC clone RP24-142M5 from chromosome 1, complete sequence
          Length = 158354

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    tcttttggttacatccatcg 392
              ||||||||||||||||||||
Sbjct: 140547 tcttttggttacatccatcg 140566
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>gb|AC145920.1| Pan troglodytes BAC clone RP43-10C15 from 7, complete sequence
          Length = 188373

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 188 acagaaggagaagctgagac 207
           ||||||||||||||||||||
Sbjct: 896 acagaaggagaagctgagac 877
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>emb|Z82194.1|HS272J12 Human DNA sequence from clone RP1-272J12 on chromosome 22, complete
             sequence
          Length = 161076

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 440   gtgggcaaaaaccaacatttacat 463
             |||||||||||||||||| |||||
Sbjct: 13112 gtgggcaaaaaccaacatatacat 13089
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>emb|AL589685.17| Human DNA sequence from clone RP11-443G18 on chromosome 1 Contains the
             5' end of the gene for Est1p-like protein B (EST1B), novel
             gene (MGC13102), novel gene (MGC31963), a von
             Hippel-Lindau syndrome (VHL) pseudogene, the CCT3 gene for
             chaperonin containing TCP1 subunit 3 (gamma), the gene for
             SSTK-interacting protein (SSTK-IP) and the 5' end of the
             RHBG gene for Rhesus blood group B glycoprotein, complete
             sequence
          Length = 107819

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   tcacagaaggagaagctgag 205
             ||||||||||||||||||||
Sbjct: 96249 tcacagaaggagaagctgag 96268
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>gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome 13, complete sequence
          Length = 193176

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   agttcaccatcatcacctgc 169
             ||||||||||||||||||||
Sbjct: 38839 agttcaccatcatcacctgc 38820
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>gb|AC095029.3| Homo sapiens chromosome 3 clone RP11-208J17, complete sequence
          Length = 151787

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     ttttggcctgctgtcatcca 36
              ||||||||||||||||||||
Sbjct: 135803 ttttggcctgctgtcatcca 135784
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>ref|NM_057437.2| Drosophila melanogaster Vitelline membrane 34Ca CG9271-RA (Vm34Ca),
           mRNA
          Length = 455

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 catgttgattggttgatgat 480
           ||||||||||||||||||||
Sbjct: 49  catgttgattggttgatgat 30
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>gb|AC107624.1| Homo sapiens chromosome 3 clone RP11-744H21, complete sequence
          Length = 170282

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     ttttggcctgctgtcatcca 36
              ||||||||||||||||||||
Sbjct: 124255 ttttggcctgctgtcatcca 124274
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>gb|BT023245.1| Drosophila melanogaster IP02756 full insert cDNA
          Length = 493

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 catgttgattggttgatgat 480
           ||||||||||||||||||||
Sbjct: 22  catgttgattggttgatgat 3
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>gb|AC127285.4| Mus musculus BAC clone RP23-336P20 from chromosome 8, complete sequence
          Length = 232127

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 322   catatgaaaagtggtttctaaagc 345
             |||||||| |||||||||||||||
Sbjct: 61145 catatgaagagtggtttctaaagc 61122
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>gb|AC149606.6| Mus musculus BAC clone RP23-466P2 from 7, complete sequence
          Length = 214153

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 428    tttgttgagctagtgggcaaaaac 451
              |||||||| |||||||||||||||
Sbjct: 161820 tttgttgaactagtgggcaaaaac 161797
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>gb|AE003640.4| Drosophila melanogaster chromosome 2L, section 49 of 83 of the complete
             sequence
          Length = 271118

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   catgttgattggttgatgat 480
             ||||||||||||||||||||
Sbjct: 29147 catgttgattggttgatgat 29166
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>gb|AC005656.1|AC005656 Drosophila melanogaster, chromosome 2R, region 34B6-34C2, P1 clone
             DS08787, complete sequence
          Length = 48443

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   catgttgattggttgatgat 480
             ||||||||||||||||||||
Sbjct: 22630 catgttgattggttgatgat 22649
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>gb|AC002327.1|AC002327 Mus musculus chromosome 7, clone 19K5, complete sequence
          Length = 159515

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 428   tttgttgagctagtgggcaaaaac 451
             |||||||| |||||||||||||||
Sbjct: 89424 tttgttgaactagtgggcaaaaac 89401
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>emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on chromosome 13, complete
             sequence
          Length = 226457

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   agttcaccatcatcacctgc 169
             ||||||||||||||||||||
Sbjct: 16228 agttcaccatcatcacctgc 16247
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>gb|DQ279878.1| Melampsora lini hesp-379 mRNA, complete cds
          Length = 820

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 aacatttacatgttgattgg 472
           ||||||||||||||||||||
Sbjct: 712 aacatttacatgttgattgg 731
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>gb|L08852.1|DROVM34CA Drosophila melanogaster vitelline membrane protein gene, complete
           cds
          Length = 1174

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 catgttgattggttgatgat 480
           ||||||||||||||||||||
Sbjct: 527 catgttgattggttgatgat 508
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>emb|AL773523.4| Mouse DNA sequence from clone RP23-186B18 on chromosome 2, complete
             sequence
          Length = 198403

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   agcaaaattctcttcagatt 362
             ||||||||||||||||||||
Sbjct: 29713 agcaaaattctcttcagatt 29732
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>emb|AL591952.9| Mouse DNA sequence from clone RP23-25N17 on chromosome 15, complete
              sequence
          Length = 208835

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     atccaatcagcactgacatg 51
              ||||||||||||||||||||
Sbjct: 188591 atccaatcagcactgacatg 188572
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>emb|X01802.1|DMVIT1 Drosophila melanogaster mRNA fragment for vitelline
          Length = 312

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 catgttgattggttgatgat 480
           ||||||||||||||||||||
Sbjct: 27  catgttgattggttgatgat 8
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>gb|M11408.1|MUSRPS16 Mouse S16 ribosomal protein gene, complete cds
          Length = 2649

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 428  tttgttgagctagtgggcaaaaac 451
            |||||||| |||||||||||||||
Sbjct: 1114 tttgttgaactagtgggcaaaaac 1137


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,825,381
Number of Sequences: 3902068
Number of extensions: 4825381
Number of successful extensions: 96766
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96624
Number of HSP's gapped (non-prelim): 137
length of query: 503
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 481
effective length of database: 17,147,199,772
effective search space: 8247803090332
effective search space used: 8247803090332
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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