| Clone Name | bags24l21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY037805.1| Oryza sativa (japonica cultivar-group) OSA15 protein mRNA, complete cds Length = 1943 Score = 379 bits (191), Expect = e-102 Identities = 320/363 (88%) Strand = Plus / Plus Query: 131 tatggcatctgccttatctgaggctgatggtatcgactacaccaatcccgaggagcttga 190 |||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1170 tatggcatctgcgttgtctgaggctgatggtatcgactacacagatcctgaggagcttga 1229 Query: 191 attattagtagcggctcttattgacctggatgccatggatgggaaaaagagtgtttcctt 250 || |||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1230 gttgttagtagcaactctcattgacctggacgccatggatgggaaaaagagtgtttcctt 1289 Query: 251 gatagttgaatgttcaagttctccagatgttaataccaggaaagctttggctaatgcatt 310 | | |||||||||||| ||||||||||||||||||||||||||||| ||||||||| | Sbjct: 1290 acttgctgaatgttcaagctctccagatgttaataccaggaaagctttagctaatgcact 1349 Query: 311 ggctgccgctccatccatgtggaccctagggaatgctgggatgggcgcattacagagatt 370 |||||| |||||||||||||||| || || |||||||||||||| |||||||||||||| Sbjct: 1350 ggctgcagctccatccatgtggattcttggaaatgctgggatgggtgcattacagagatt 1409 Query: 371 ggctcaagattccaatcccgctgtagctagctctgcagcaagagccattggtgaactcag 430 |||||||||||||||| |||||||| || ||||| |||||||||| |||||||| Sbjct: 1410 ggctcaagattccaattatgctgtagccagggctgcaacaagagccatcaatgaactcac 1469 Query: 431 aaagcagtgggagcttgaagagggtgacagtctgaggtttgtcatgaaccaaaacttggt 490 |||||| |||||||||||||| |||||||| ||||||||||| |||| ||||| |||| Sbjct: 1470 aaagcaatgggagcttgaagaaggtgacagcctgaggtttgtactgaatcaaaatatggt 1529 Query: 491 ttc 493 ||| Sbjct: 1530 ttc 1532
>gb|AY466106.1| Oryza sativa (japonica cultivar-group) PSAG protein (PSAG) mRNA, complete cds Length = 1685 Score = 379 bits (191), Expect = e-102 Identities = 320/363 (88%) Strand = Plus / Plus Query: 131 tatggcatctgccttatctgaggctgatggtatcgactacaccaatcccgaggagcttga 190 |||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1118 tatggcatctgcgttgtctgaggctgatggtatcgactacacagatcctgaggagcttga 1177 Query: 191 attattagtagcggctcttattgacctggatgccatggatgggaaaaagagtgtttcctt 250 || |||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1178 gttgttagtagcaactctcattgacctggacgccatggatgggaaaaagagtgtttcctt 1237 Query: 251 gatagttgaatgttcaagttctccagatgttaataccaggaaagctttggctaatgcatt 310 | | |||||||||||| ||||||||||||||||||||||||||||| ||||||||| | Sbjct: 1238 acttgctgaatgttcaagctctccagatgttaataccaggaaagctttagctaatgcact 1297 Query: 311 ggctgccgctccatccatgtggaccctagggaatgctgggatgggcgcattacagagatt 370 |||||| |||||||||||||||| || || |||||||||||||| |||||||||||||| Sbjct: 1298 ggctgcagctccatccatgtggattcttggaaatgctgggatgggtgcattacagagatt 1357 Query: 371 ggctcaagattccaatcccgctgtagctagctctgcagcaagagccattggtgaactcag 430 |||||||||||||||| |||||||| || ||||| |||||||||| |||||||| Sbjct: 1358 ggctcaagattccaattatgctgtagccagggctgcaacaagagccatcaatgaactcac 1417 Query: 431 aaagcagtgggagcttgaagagggtgacagtctgaggtttgtcatgaaccaaaacttggt 490 |||||| |||||||||||||| |||||||| ||||||||||| |||| ||||| |||| Sbjct: 1418 aaagcaatgggagcttgaagaaggtgacagcctgaggtttgtactgaatcaaaatatggt 1477 Query: 491 ttc 493 ||| Sbjct: 1478 ttc 1480
>dbj|AK104683.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A07, full insert sequence Length = 1410 Score = 379 bits (191), Expect = e-102 Identities = 320/363 (88%) Strand = Plus / Plus Query: 131 tatggcatctgccttatctgaggctgatggtatcgactacaccaatcccgaggagcttga 190 |||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 764 tatggcatctgcgttgtctgaggctgatggtatcgactacacagatcctgaggagcttga 823 Query: 191 attattagtagcggctcttattgacctggatgccatggatgggaaaaagagtgtttcctt 250 || |||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 824 gttgttagtagcaactctcattgacctggacgccatggatgggaaaaagagtgtttcctt 883 Query: 251 gatagttgaatgttcaagttctccagatgttaataccaggaaagctttggctaatgcatt 310 | | |||||||||||| ||||||||||||||||||||||||||||| ||||||||| | Sbjct: 884 acttgctgaatgttcaagctctccagatgttaataccaggaaagctttagctaatgcact 943 Query: 311 ggctgccgctccatccatgtggaccctagggaatgctgggatgggcgcattacagagatt 370 |||||| |||||||||||||||| || || |||||||||||||| |||||||||||||| Sbjct: 944 ggctgcagctccatccatgtggattcttggaaatgctgggatgggtgcattacagagatt 1003 Query: 371 ggctcaagattccaatcccgctgtagctagctctgcagcaagagccattggtgaactcag 430 |||||||||||||||| |||||||| || ||||| |||||||||| |||||||| Sbjct: 1004 ggctcaagattccaattatgctgtagccagggctgcaacaagagccatcaatgaactcac 1063 Query: 431 aaagcagtgggagcttgaagagggtgacagtctgaggtttgtcatgaaccaaaacttggt 490 |||||| |||||||||||||| |||||||| ||||||||||| |||| ||||| |||| Sbjct: 1064 aaagcaatgggagcttgaagaaggtgacagcctgaggtttgtactgaatcaaaatatggt 1123 Query: 491 ttc 493 ||| Sbjct: 1124 ttc 1126
>dbj|AK069108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008A06, full insert sequence Length = 1883 Score = 379 bits (191), Expect = e-102 Identities = 320/363 (88%) Strand = Plus / Plus Query: 131 tatggcatctgccttatctgaggctgatggtatcgactacaccaatcccgaggagcttga 190 |||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1170 tatggcatctgcgttgtctgaggctgatggtatcgactacacagatcctgaggagcttga 1229 Query: 191 attattagtagcggctcttattgacctggatgccatggatgggaaaaagagtgtttcctt 250 || |||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1230 gttgttagtagcaactctcattgacctggacgccatggatgggaaaaagagtgtttcctt 1289 Query: 251 gatagttgaatgttcaagttctccagatgttaataccaggaaagctttggctaatgcatt 310 | | |||||||||||| ||||||||||||||||||||||||||||| ||||||||| | Sbjct: 1290 acttgctgaatgttcaagctctccagatgttaataccaggaaagctttagctaatgcact 1349 Query: 311 ggctgccgctccatccatgtggaccctagggaatgctgggatgggcgcattacagagatt 370 |||||| |||||||||||||||| || || |||||||||||||| |||||||||||||| Sbjct: 1350 ggctgcagctccatccatgtggattcttggaaatgctgggatgggtgcattacagagatt 1409 Query: 371 ggctcaagattccaatcccgctgtagctagctctgcagcaagagccattggtgaactcag 430 |||||||||||||||| |||||||| || ||||| |||||||||| |||||||| Sbjct: 1410 ggctcaagattccaattatgctgtagccagggctgcaacaagagccatcaatgaactcac 1469 Query: 431 aaagcagtgggagcttgaagagggtgacagtctgaggtttgtcatgaaccaaaacttggt 490 |||||| |||||||||||||| |||||||| ||||||||||| |||| ||||| |||| Sbjct: 1470 aaagcaatgggagcttgaagaaggtgacagcctgaggtttgtactgaatcaaaatatggt 1529 Query: 491 ttc 493 ||| Sbjct: 1530 ttc 1532
>gb|AY105655.1| Zea mays PCO116765 mRNA sequence Length = 415 Score = 202 bits (102), Expect = 9e-49 Identities = 186/214 (86%) Strand = Plus / Plus Query: 73 tgttccctcgtgaagtttctactgatcaaatcgctgccatagaggatgcatatcttaata 132 |||| ||| ||||||||||| ||||||| || |||||||||||| ||||| | | || Sbjct: 68 tgtttcctggtgaagtttctgctgatcagatttatgccatagaggaagcataccagagta 127 Query: 133 tggcatctgccttatctgaggctgatggtatcgactacaccaatcccgaggagcttgaat 192 ||||||||||||| ||||| ||||||||||| |||||| | |||| ||||||||||||| Sbjct: 128 tggcatctgccttttctgaagctgatggtattgactacgctgatcctgaggagcttgaat 187 Query: 193 tattagtagcggctcttattgacctggatgccatggatgggaaaaagagtgtttccttga 252 | || ||||| |||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 188 tgttggtagcaactctaattgacctggatgccatggatgggaaaaggagtgtttccttga 247 Query: 253 tagttgaatgttcaagttctccagatgttaatac 286 | | |||||||||||| ||||||||||||||||| Sbjct: 248 ttgctgaatgttcaagctctccagatgttaatac 281
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 184 agcttgaattattagtagcggctcttattgacctggatgccatggatgggaaaaagagtg 243 ||||||| || |||||||| |||| ||||||||||| |||||||||||||||||||||| Sbjct: 7621 agcttgagttgttagtagcaactctcattgacctggacgccatggatgggaaaaagagtg 7680 Query: 244 tttccttgatagttgaatgttcaagttctccagatgttaataccagg 290 ||||||| | | |||||||||||| ||||||||||||||||||||| Sbjct: 7681 tttccttacttgctgaatgttcaagctctccagatgttaataccagg 7727 Score = 109 bits (55), Expect = 1e-20 Identities = 112/131 (85%) Strand = Plus / Plus Query: 363 cagagattggctcaagattccaatcccgctgtagctagctctgcagcaagagccattggt 422 |||||||||||||||||||||||| |||||||| || ||||| |||||||||| | Sbjct: 8598 cagagattggctcaagattccaattatgctgtagccagggctgcaacaagagccatcaat 8657 Query: 423 gaactcagaaagcagtgggagcttgaagagggtgacagtctgaggtttgtcatgaaccaa 482 ||||||| |||||| |||||||||||||| |||||||| ||||||||||| |||| ||| Sbjct: 8658 gaactcacaaagcaatgggagcttgaagaaggtgacagcctgaggtttgtactgaatcaa 8717 Query: 483 aacttggtttc 493 || ||||||| Sbjct: 8718 aatatggtttc 8728 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 288 aggaaagctttggctaatgcattggctgccgctccatccatgtggaccctagggaatgct 347 ||||||||||| ||||||||| ||||||| |||||||||||||||| || || |||||| Sbjct: 8150 aggaaagctttagctaatgcactggctgcagctccatccatgtggattcttggaaatgct 8209 Query: 348 gggatgggcgcattacag 365 |||||||| ||||||||| Sbjct: 8210 gggatgggtgcattacag 8227 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 131 tatggcatctgccttatctgaggctgatggtatcgactacaccaatcccgaggag 185 |||||||||||| || |||||||||||||||||||||||||| |||| |||||| Sbjct: 7488 tatggcatctgcgttgtctgaggctgatggtatcgactacacagatcctgaggag 7542
>gb|AY466107.1| Oryza sativa (japonica cultivar-group) PSAG protein (PSAG) gene, complete cds Length = 4050 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 184 agcttgaattattagtagcggctcttattgacctggatgccatggatgggaaaaagagtg 243 ||||||| || |||||||| |||| ||||||||||| |||||||||||||||||||||| Sbjct: 2738 agcttgagttgttagtagcaactctcattgacctggacgccatggatgggaaaaagagtg 2797 Query: 244 tttccttgatagttgaatgttcaagttctccagatgttaataccagg 290 ||||||| | | |||||||||||| ||||||||||||||||||||| Sbjct: 2798 tttccttacttgctgaatgttcaagctctccagatgttaataccagg 2844 Score = 109 bits (55), Expect = 1e-20 Identities = 112/131 (85%) Strand = Plus / Plus Query: 363 cagagattggctcaagattccaatcccgctgtagctagctctgcagcaagagccattggt 422 |||||||||||||||||||||||| |||||||| || ||||| |||||||||| | Sbjct: 3715 cagagattggctcaagattccaattatgctgtagccagggctgcaacaagagccatcaat 3774 Query: 423 gaactcagaaagcagtgggagcttgaagagggtgacagtctgaggtttgtcatgaaccaa 482 ||||||| |||||| |||||||||||||| |||||||| ||||||||||| |||| ||| Sbjct: 3775 gaactcacaaagcaatgggagcttgaagaaggtgacagcctgaggtttgtactgaatcaa 3834 Query: 483 aacttggtttc 493 || ||||||| Sbjct: 3835 aatatggtttc 3845 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 288 aggaaagctttggctaatgcattggctgccgctccatccatgtggaccctagggaatgct 347 ||||||||||| ||||||||| ||||||| |||||||||||||||| || || |||||| Sbjct: 3267 aggaaagctttagctaatgcactggctgcagctccatccatgtggattcttggaaatgct 3326 Query: 348 gggatgggcgcattacag 365 |||||||| ||||||||| Sbjct: 3327 gggatgggtgcattacag 3344 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 131 tatggcatctgccttatctgaggctgatggtatcgactacaccaatcccgaggag 185 |||||||||||| || |||||||||||||||||||||||||| |||| |||||| Sbjct: 2605 tatggcatctgcgttgtctgaggctgatggtatcgactacacagatcctgaggag 2659
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 184 agcttgaattattagtagcggctcttattgacctggatgccatggatgggaaaaagagtg 243 ||||||| || |||||||| |||| ||||||||||| |||||||||||||||||||||| Sbjct: 130953 agcttgagttgttagtagcaactctcattgacctggacgccatggatgggaaaaagagtg 130894 Query: 244 tttccttgatagttgaatgttcaagttctccagatgttaataccagg 290 ||||||| | | |||||||||||| ||||||||||||||||||||| Sbjct: 130893 tttccttacttgctgaatgttcaagctctccagatgttaataccagg 130847 Score = 109 bits (55), Expect = 1e-20 Identities = 112/131 (85%) Strand = Plus / Minus Query: 363 cagagattggctcaagattccaatcccgctgtagctagctctgcagcaagagccattggt 422 |||||||||||||||||||||||| |||||||| || ||||| |||||||||| | Sbjct: 129976 cagagattggctcaagattccaattatgctgtagccagggctgcaacaagagccatcaat 129917 Query: 423 gaactcagaaagcagtgggagcttgaagagggtgacagtctgaggtttgtcatgaaccaa 482 ||||||| |||||| |||||||||||||| |||||||| ||||||||||| |||| ||| Sbjct: 129916 gaactcacaaagcaatgggagcttgaagaaggtgacagcctgaggtttgtactgaatcaa 129857 Query: 483 aacttggtttc 493 || ||||||| Sbjct: 129856 aatatggtttc 129846 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 288 aggaaagctttggctaatgcattggctgccgctccatccatgtggaccctagggaatgct 347 ||||||||||| ||||||||| ||||||| |||||||||||||||| || || |||||| Sbjct: 130424 aggaaagctttagctaatgcactggctgcagctccatccatgtggattcttggaaatgct 130365 Query: 348 gggatgggcgcattacag 365 |||||||| ||||||||| Sbjct: 130364 gggatgggtgcattacag 130347 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 131 tatggcatctgccttatctgaggctgatggtatcgactacaccaatcccgaggag 185 |||||||||||| || |||||||||||||||||||||||||| |||| |||||| Sbjct: 131086 tatggcatctgcgttgtctgaggctgatggtatcgactacacagatcctgaggag 131032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 184 agcttgaattattagtagcggctcttattgacctggatgccatggatgggaaaaagagtg 243 ||||||| || |||||||| |||| ||||||||||| |||||||||||||||||||||| Sbjct: 2729295 agcttgagttgttagtagcaactctcattgacctggacgccatggatgggaaaaagagtg 2729354 Query: 244 tttccttgatagttgaatgttcaagttctccagatgttaataccagg 290 ||||||| | | |||||||||||| ||||||||||||||||||||| Sbjct: 2729355 tttccttacttgctgaatgttcaagctctccagatgttaataccagg 2729401 Score = 109 bits (55), Expect = 1e-20 Identities = 112/131 (85%) Strand = Plus / Plus Query: 363 cagagattggctcaagattccaatcccgctgtagctagctctgcagcaagagccattggt 422 |||||||||||||||||||||||| |||||||| || ||||| |||||||||| | Sbjct: 2730272 cagagattggctcaagattccaattatgctgtagccagggctgcaacaagagccatcaat 2730331 Query: 423 gaactcagaaagcagtgggagcttgaagagggtgacagtctgaggtttgtcatgaaccaa 482 ||||||| |||||| |||||||||||||| |||||||| ||||||||||| |||| ||| Sbjct: 2730332 gaactcacaaagcaatgggagcttgaagaaggtgacagcctgaggtttgtactgaatcaa 2730391 Query: 483 aacttggtttc 493 || ||||||| Sbjct: 2730392 aatatggtttc 2730402 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 288 aggaaagctttggctaatgcattggctgccgctccatccatgtggaccctagggaatgct 347 ||||||||||| ||||||||| ||||||| |||||||||||||||| || || |||||| Sbjct: 2729824 aggaaagctttagctaatgcactggctgcagctccatccatgtggattcttggaaatgct 2729883 Query: 348 gggatgggcgcattacag 365 |||||||| ||||||||| Sbjct: 2729884 gggatgggtgcattacag 2729901 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 131 tatggcatctgccttatctgaggctgatggtatcgactacaccaatcccgaggag 185 |||||||||||| || |||||||||||||||||||||||||| |||| |||||| Sbjct: 2729162 tatggcatctgcgttgtctgaggctgatggtatcgactacacagatcctgaggag 2729216
>gb|AY086709.1| Arabidopsis thaliana clone 269548 mRNA, complete sequence Length = 1595 Score = 89.7 bits (45), Expect = 1e-14 Identities = 171/213 (80%) Strand = Plus / Plus Query: 156 gatggtatcgactacaccaatcccgaggagcttgaattattagtagcggctcttattgac 215 ||||| || |||||||| | ||||| ||||| || |||||||| || |||| |||||| Sbjct: 981 gatgggattgactacactgaccccgaagagctcgagttattagtcacgactctgattgac 1040 Query: 216 ctggatgccatggatgggaaaaagagtgtttccttgatagttgaatgttcaagttctcca 275 || ||||| |||||||| |||| |||| || | | | |||||| ||||| |||||| Sbjct: 1041 cttgatgcaatggatggtaaaagtagtgcatctctcttggctgaatgctcaagctctcca 1100 Query: 276 gatgttaataccaggaaagctttggctaatgcattggctgccgctccatccatgtggacc 335 ||||| ||||| || ||||| ||||||||||| || || || || ||||| |||||||| Sbjct: 1101 gatgtcaatacaagaaaagcgttggctaatgccttagcagcggcaccatcaatgtggaca 1160 Query: 336 ctagggaatgctgggatgggcgcattacagaga 368 ||||| ||||| || ||||| |||||||||||| Sbjct: 1161 ctaggaaatgcaggcatgggagcattacagaga 1193
>gb|AF359253.1| Arabidopsis thaliana ATA15 protein mRNA, complete cds Length = 1481 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 257 tgaatgttcaagttctccagatgttaataccaggaaagctttggctaatgcattggctgc 316 |||||| ||||| ||||||||||| ||||| || ||||| ||||||||||| || || || Sbjct: 990 tgaatgctcaagctctccagatgtcaatacaagaaaagcgttggctaatgctttagcagc 1049 Query: 317 cgctccatccatgtggaccctagggaatgctgggatgggcgcattacagaga 368 || ||||| |||||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 1050 ggcaccatcaatgtggacactaggaaatgcaggaatgggagcattacagaga 1101
>ref|NM_105304.2| Arabidopsis thaliana unknown protein AT1G66330 transcript variant AT1G66330.1 mRNA, complete cds Length = 1610 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 257 tgaatgttcaagttctccagatgttaataccaggaaagctttggctaatgcattggctgc 316 |||||| ||||| ||||||||||| ||||| || ||||| ||||||||||| || || || Sbjct: 1083 tgaatgctcaagctctccagatgtcaatacaagaaaagcgttggctaatgctttagcagc 1142 Query: 317 cgctccatccatgtggaccctagggaatgctgggatgggcgcattacagaga 368 || ||||| |||||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 1143 ggcaccatcaatgtggacactaggaaatgcaggaatgggagcattacagaga 1194
>ref|NM_202366.1| Arabidopsis thaliana unknown protein AT1G66330 transcript variant AT1G66330.2 mRNA, complete cds Length = 1600 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 257 tgaatgttcaagttctccagatgttaataccaggaaagctttggctaatgcattggctgc 316 |||||| ||||| ||||||||||| ||||| || ||||| ||||||||||| || || || Sbjct: 1073 tgaatgctcaagctctccagatgtcaatacaagaaaagcgttggctaatgctttagcagc 1132 Query: 317 cgctccatccatgtggaccctagggaatgctgggatgggcgcattacagaga 368 || ||||| |||||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 1133 ggcaccatcaatgtggacactaggaaatgcaggaatgggagcattacagaga 1184
>gb|AY093251.1| Arabidopsis thaliana unknown protein (At1g66330) mRNA, complete cds Length = 705 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 257 tgaatgttcaagttctccagatgttaataccaggaaagctttggctaatgcattggctgc 316 |||||| ||||| ||||||||||| ||||| || ||||| ||||||||||| || || || Sbjct: 327 tgaatgctcaagctctccagatgtcaatacaagaaaagcgttggctaatgctttagcagc 386 Query: 317 cgctccatccatgtggaccctagggaatgctgggatgggcgcattacagaga 368 || ||||| |||||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 387 ggcaccatcaatgtggacactaggaaatgcaggaatgggagcattacagaga 438
>gb|AY065186.1| Arabidopsis thaliana unknown protein (At1g66330; T27F4.8) mRNA, complete cds Length = 1692 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 257 tgaatgttcaagttctccagatgttaataccaggaaagctttggctaatgcattggctgc 316 |||||| ||||| ||||||||||| ||||| || ||||| ||||||||||| || || || Sbjct: 1165 tgaatgctcaagctctccagatgtcaatacaagaaaagcgttggctaatgctttagcagc 1224 Query: 317 cgctccatccatgtggaccctagggaatgctgggatgggcgcattacagaga 368 || ||||| |||||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 1225 ggcaccatcaatgtggacactaggaaatgcaggaatgggagcattacagaga 1276
>emb|BX814992.1|CNS0ACT7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1469 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 257 tgaatgttcaagttctccagatgttaataccaggaaagctttggctaatgcattggctgc 316 |||||| ||||| ||||||||||| ||||| || ||||| ||||||||||| || || || Sbjct: 972 tgaatgctcaagctctccagatgtcaatacaagaaaagcgttggctaatgctttagcagc 1031 Query: 317 cgctccatccatgtggaccctagggaatgctgggatgggcgcattacagaga 368 || ||||| |||||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 1032 ggcaccatcaatgtggacactaggaaatgcaggaatgggagcattacagaga 1083
>emb|BX815090.1|CNS0AAOA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1407 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 257 tgaatgttcaagttctccagatgttaataccaggaaagctttggctaatgcattggctgc 316 |||||| ||||| ||||||||||| ||||| || ||||| ||||||||||| || || || Sbjct: 988 tgaatgctcaagctctccagatgtcaatacaagaaaagcgttggctaatgctttagcagc 1047 Query: 317 cgctccatccatgtggaccctagggaatgctgggatgggcgcattacagaga 368 || ||||| |||||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 1048 ggcaccatcaatgtggacactaggaaatgcaggaatgggagcattacagaga 1099
>emb|BX818534.1|CNS0ACMO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZB08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 257 tgaatgttcaagttctccagatgttaataccaggaaagctttggctaatgcattggctgc 316 |||||| ||||||||||||||||| ||||| | ||||| ||||||||||| || || || Sbjct: 1054 tgaatgctcaagttctccagatgtcaatacaataaaagcgttggctaatgctttagcagc 1113 Query: 317 cgctccatccatgtggaccctagggaatgctgggatgggcgcattacaga 366 || ||||| ||||||| ||||| ||||| || ||||| |||||||||| Sbjct: 1114 ggcaccatcaatgtggatactaggaaatgcaggaatgggagcattacaga 1163
>gb|BT013792.1| Lycopersicon esculentum clone 132712F, mRNA sequence Length = 1720 Score = 56.0 bits (28), Expect = 1e-04 Identities = 118/148 (79%) Strand = Plus / Plus Query: 219 gatgccatggatgggaaaaagagtgtttccttgatagttgaatgttcaagttctccagat 278 ||||| |||||||| |||| ||||| |||||| | | || |||||||||||||| ||| Sbjct: 1194 gatgcaatggatggtaaaagtagtgtatccttgctggccgagtgttcaagttctcctgat 1253 Query: 279 gttaataccaggaaagctttggctaatgcattggctgccgctccatccatgtggacccta 338 || || || |||||||| || || |||||| | || || || || ||||||||||| || Sbjct: 1254 gtgaacacaaggaaagcattagcaaatgcacttgcagctgcaccgtccatgtggacttta 1313 Query: 339 gggaatgctgggatgggcgcattacaga 366 || || ||||| ||||| || ||||||| Sbjct: 1314 ggaaacgctggcatgggagcgttacaga 1341
>gb|AF234536.1|AF234536 Ipomoea batatas senescence-associated protein mRNA, complete cds Length = 1841 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 261 tgttcaagttctccagatgttaataccaggaaagctttggctaatgcattggctgccgct 320 ||||| |||||||| ||||| ||||| |||||||| || ||||||||| | | || || Sbjct: 1180 tgttcgagttctcccgatgtcaatacaaggaaagcattagctaatgcactatcggctgca 1239 Query: 321 ccatccatgtggaccctagggaatgctgggatgggcgcattacagaga 368 |||||||||||||| || || ||||| || ||||| || || |||||| Sbjct: 1240 ccatccatgtggactctgggaaatgcgggcatgggagctttgcagaga 1287
>gb|AC020665.6|AC020665 Arabidopsis thaliana chromosome 1 BAC T27F4 genomic sequence, complete sequence Length = 85702 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 291 aaagctttggctaatgcattggctgccgctccatccatgtggaccctagggaatgctggg 350 ||||| ||||||||||| || || || || ||||| |||||||| ||||| ||||| || Sbjct: 31852 aaagcgttggctaatgctttagcagcggcaccatcaatgtggacactaggaaatgcagga 31793 Query: 351 atgggcgcattacag 365 ||||| ||||||||| Sbjct: 31792 atgggagcattacag 31778
>gb|AY206646.1| Nicotiana tabacum NTA15 protein mRNA, complete cds Length = 1737 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 219 gatgccatggatgggaaaaagagtgtttccttgatagttgaatgttcaagttctccagat 278 ||||| |||||||| |||| ||||| || ||| | | ||| |||||||||||||| ||| Sbjct: 1163 gatgcaatggatggtaaaagtagtgtatcattgcttgctgagtgttcaagttctcctgat 1222 Query: 279 gttaataccaggaaagc 295 || ||||| |||||||| Sbjct: 1223 gtaaatacgaggaaagc 1239
>gb|AY562212.1| Squalus acanthias melanocortin 5 receptor (MC5R) gene, complete cds Length = 1289 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 494 cgatgagactgatgatgacagttg 517 ||||||||| |||||||||||||| Sbjct: 687 cgatgagacagatgatgacagttg 664
>gb|AC145388.2| Oryza sativa chromosome 3 BAC OSJNBb0036M02 genomic sequence, complete sequence Length = 125380 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ggctgccgctccatccatgt 330 |||||||||||||||||||| Sbjct: 71351 ggctgccgctccatccatgt 71332
>gb|AC125006.9| Mus musculus chromosome 3, clone RP24-157K20, complete sequence Length = 169078 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 aaagcagtgggagcttgaag 450 |||||||||||||||||||| Sbjct: 54667 aaagcagtgggagcttgaag 54686
>gb|AC161235.6| Mus musculus chromosome 3, clone RP24-86C19, complete sequence Length = 206729 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 aaagcagtgggagcttgaag 450 |||||||||||||||||||| Sbjct: 127459 aaagcagtgggagcttgaag 127440
>gb|AC135567.3| Mus musculus BAC clone RP23-312I24 from chromosome 16, complete sequence Length = 208603 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 aactcagaaagcagtgggag 443 |||||||||||||||||||| Sbjct: 184229 aactcagaaagcagtgggag 184210
>gb|AC115787.6| Mus musculus chromosome 16, clone RP23-212P1, complete sequence Length = 209108 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 aactcagaaagcagtgggag 443 |||||||||||||||||||| Sbjct: 184168 aactcagaaagcagtgggag 184187
>ref|NM_027919.1| Mus musculus threonine aldolase 1 (Tha1), mRNA Length = 2688 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 gctccatccatgtggaccct 337 |||||||||||||||||||| Sbjct: 1615 gctccatccatgtggaccct 1596
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ggctgccgctccatccatgt 330 |||||||||||||||||||| Sbjct: 26031781 ggctgccgctccatccatgt 26031800
>gb|AC147144.2| Pan troglodytes BAC clone CH251-278J22 from Y, complete sequence Length = 178957 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aaaatgggaagattcttaag 71 |||||||||||||||||||| Sbjct: 85759 aaaatgggaagattcttaag 85778
>gb|AC146182.3| Pan troglodytes BAC clone CH251-540L24 from Y, complete sequence Length = 251472 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aaaatgggaagattcttaag 71 |||||||||||||||||||| Sbjct: 8093 aaaatgggaagattcttaag 8074
>emb|CR354584.8| Zebrafish DNA sequence from clone DKEY-7B6 in linkage group 12, complete sequence Length = 218091 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 510 gacagttgagtagcagagatggta 533 |||||||||||||||||| ||||| Sbjct: 163684 gacagttgagtagcagagctggta 163707
>gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CIT987SK-44M2, complete sequence Length = 213541 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 atgatgacagttgagtagca 524 |||||||||||||||||||| Sbjct: 27171 atgatgacagttgagtagca 27152
>emb|CR450737.4| Zebrafish DNA sequence from clone CH211-167D24 in linkage group 12, complete sequence Length = 156532 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 gacagttgagtagcagagatggta 533 |||||||||||||||||| ||||| Sbjct: 21595 gacagttgagtagcagagctggta 21572
>emb|BX323028.6| Zebrafish DNA sequence from clone DKEY-211A8 in linkage group 23, complete sequence Length = 97428 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 gacagttgagtagcagagatggta 533 |||||||||||||||||| ||||| Sbjct: 41567 gacagttgagtagcagagctggta 41544
>gb|AC174609.3| Cavia porcellus clone CH234-34N9, complete sequence Length = 136141 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 ctgatgatgacagttgagta 521 |||||||||||||||||||| Sbjct: 70819 ctgatgatgacagttgagta 70838
>emb|BX842650.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 5/11 Length = 349723 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 gaaccaaaacttggtttccg 495 |||||||||||||||||||| Sbjct: 264253 gaaccaaaacttggtttccg 264272
>gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genomic sequence, complete sequence Length = 139187 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ggctgccgctccatccatgt 330 |||||||||||||||||||| Sbjct: 124769 ggctgccgctccatccatgt 124750
>emb|BX548171.4| Zebrafish DNA sequence from clone DKEY-152J20 in linkage group 14, complete sequence Length = 174366 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 gggtgacagtctgaggtttg 471 |||||||||||||||||||| Sbjct: 66517 gggtgacagtctgaggtttg 66498
>emb|BX470267.5| Zebrafish DNA sequence from clone DKEY-98H23, complete sequence Length = 182303 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 gacagttgagtagcagagatggta 533 |||||||||||||||||| ||||| Sbjct: 126692 gacagttgagtagcagagctggta 126669
>dbj|BS000638.2| Pan troglodytes chromosome Y clone: PTBY-011C06, complete sequence Length = 86985 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aaaatgggaagattcttaag 71 |||||||||||||||||||| Sbjct: 8095 aaaatgggaagattcttaag 8114
>dbj|BS000637.2| Pan troglodytes chromosome Y clone: PTBY-009K23, complete sequence Length = 144454 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aaaatgggaagattcttaag 71 |||||||||||||||||||| Sbjct: 94802 aaaatgggaagattcttaag 94821
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aaaatgggaagattcttaag 71 |||||||||||||||||||| Sbjct: 19561627 aaaatgggaagattcttaag 19561608
>gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, complete sequence Length = 93288 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 atgatgacagttgagtagca 524 |||||||||||||||||||| Sbjct: 46310 atgatgacagttgagtagca 46291
>gb|BC066149.1| Mus musculus threonine aldolase 1, mRNA (cDNA clone MGC:76477 IMAGE:30469743), complete cds Length = 1156 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 gctccatccatgtggaccct 337 |||||||||||||||||||| Sbjct: 62 gctccatccatgtggaccct 43
>gb|BC055825.1| Mus musculus threonine aldolase 1, mRNA (cDNA clone IMAGE:4192668) Length = 1805 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 gctccatccatgtggaccct 337 |||||||||||||||||||| Sbjct: 698 gctccatccatgtggaccct 679
>dbj|AK005036.2| Mus musculus adult male liver cDNA, RIKEN full-length enriched library, clone:1300017K07 product:hypothetical PLP-dependent transferases structure containing protein, full insert sequence Length = 2688 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 gctccatccatgtggaccct 337 |||||||||||||||||||| Sbjct: 1615 gctccatccatgtggaccct 1596
>gb|DQ350752.1| Ajellomyces capsulatus nitrosative stress induced transcription 97 (NIT97) gene, partial sequence Length = 3734 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctgaggctgatggtatcga 166 |||||||||||||||||||| Sbjct: 1418 tctgaggctgatggtatcga 1399
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ggctgccgctccatccatgt 330 |||||||||||||||||||| Sbjct: 26123044 ggctgccgctccatccatgt 26123063
>dbj|AK184443.1| Mus musculus cDNA, clone:Y0G0130A12, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000017858, based on BLAT search Length = 181 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 gctccatccatgtggaccct 337 |||||||||||||||||||| Sbjct: 56 gctccatccatgtggaccct 37
>gb|AY219872.1| Mus musculus truncated L-threonine aldolase isoform (Gly1) mRNA, complete cds; alternatively spliced Length = 1114 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 gctccatccatgtggaccct 337 |||||||||||||||||||| Sbjct: 549 gctccatccatgtggaccct 530
>gb|AY219871.1| Mus musculus L-threonine aldolase (Gly1) mRNA, complete cds; alternatively spliced Length = 1855 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 gctccatccatgtggaccct 337 |||||||||||||||||||| Sbjct: 765 gctccatccatgtggaccct 746
>gb|L16962.1|PARDHCO1A Paramecium tetraurelia dynein heavy chain (DHC01) mRNA, partial cds Length = 162 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 aaagctttggctaatgcattggct 314 |||| ||||||||||||||||||| Sbjct: 31 aaagatttggctaatgcattggct 54
>gb|AF110177.1|AF110177 Gallus gallus smooth muscle myosin phosphatase myosin-binding subunit (MBSP) gene, partial cds Length = 6804 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gagaaaaatgggaagattct 67 |||||||||||||||||||| Sbjct: 1543 gagaaaaatgggaagattct 1524
>gb|AC104908.10| Mus musculus chromosome 3, clone RP23-325M18, complete sequence Length = 231792 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 aaagcagtgggagcttgaag 450 |||||||||||||||||||| Sbjct: 212814 aaagcagtgggagcttgaag 212833
>emb|AL591433.6| Mouse DNA sequence from clone RP23-268N22 on chromosome 11, complete sequence Length = 203336 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gctccatccatgtggaccct 337 |||||||||||||||||||| Sbjct: 46102 gctccatccatgtggaccct 46121
>emb|AL731790.10| Mouse DNA sequence from clone RP23-104P2 on chromosome 2, complete sequence Length = 214765 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 aatcccgctgtagctagctctgca 407 ||||||| |||||||||||||||| Sbjct: 33279 aatcccgatgtagctagctctgca 33302
>gb|AC154098.6| Mus musculus chromosome 3, clone RP23-196L9, complete sequence Length = 201332 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 aaagcagtgggagcttgaag 450 |||||||||||||||||||| Sbjct: 19055 aaagcagtgggagcttgaag 19074
>dbj|AP003480.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1970H2 Length = 150331 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aaaaagagtgtttccttgat 253 |||||||||||||||||||| Sbjct: 74601 aaaaagagtgtttccttgat 74582
>emb|AL844565.2| Mouse DNA sequence from clone RP23-427L11 on chromosome 2, complete sequence Length = 95786 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 gctgtagctagctctgcagc 409 |||||||||||||||||||| Sbjct: 18012 gctgtagctagctctgcagc 17993 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,113,569 Number of Sequences: 3902068 Number of extensions: 5113569 Number of successful extensions: 104276 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 104053 Number of HSP's gapped (non-prelim): 224 length of query: 589 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 566 effective length of database: 17,143,297,704 effective search space: 9703106500464 effective search space used: 9703106500464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)