ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags25a19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473722.1| Oryza sativa (japonica cultivar-group), predic... 105 2e-19
2dbj|AK072902.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
4emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4,... 90 1e-14
5gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 48 0.035
6emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in l... 46 0.14
7gb|AC160019.2| Gallus gallus BAC clone CH261-50H15 from chromoso... 46 0.14
8ref|XM_493895.1| Oryza sativa (japonica cultivar-group), predic... 42 2.2
9gb|AY157024.2| Homo sapiens peroxisome proliferative activated r... 42 2.2
10gb|AC076968.38| Homo sapiens 12 BAC RP11-686F15 (Roswell Park Ca... 42 2.2
11gb|AC004890.2| Homo sapiens PAC clone RP4-800G7 from 7, complete... 42 2.2
12emb|AL591470.12| Human DNA sequence from clone RP11-263I4 on chr... 42 2.2
13gb|AC148926.4| Pan troglodytes BAC clone RP43-136P16 from chromo... 42 2.2
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
15gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C... 42 2.2
16gb|AC012531.11|AC012531 Homo sapiens, clone RP11-83K1, complete ... 42 2.2
17emb|AL844580.13| Mouse DNA sequence from clone RP23-367K9 on chr... 42 2.2
18dbj|AK067943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
19dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0... 42 2.2
20emb|CT573501.1| Medicago truncatula chromosome 5 clone mth2-60o2... 42 2.2
21gb|AC090947.2| Homo sapiens chromosome 3 clone RP11-30G23 map 3p... 42 2.2
22gb|AC093174.2| Homo sapiens chromosome 3 clone RP11-167M22 map 3... 42 2.2
23gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, comp... 40 8.5
24gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 40 8.5
25gb|AF053356.1| Homo sapiens chromosome 7q22 sequence, complete s... 40 8.5
26gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.5
27ref|XM_599203.2| PREDICTED: Bos taurus similar to Jumonji, AT ri... 40 8.5
28ref|XM_612405.2| PREDICTED: Bos taurus similar to Jumonji, AT ri... 40 8.5
29ref|XM_323533.1| Neurospora crassa OR74A predicted protein (NCU0... 40 8.5
30ref|XM_956061.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.5
31gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome 40 8.5
32gb|DQ496110.1| Homo sapiens transferrin receptor 2 (TFR2) gene, ... 40 8.5
33gb|AE009131.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 8.5
34gb|AC108947.5| Mus musculus BAC clone RP23-140A11 from chromosom... 40 8.5
35gb|AC164637.3| Mus musculus BAC clone RP23-128I20 from chromosom... 40 8.5
36gb|AF117829.3| Homo sapiens chromosome 8 multiple clones map q21... 40 8.5
37emb|CT025291.2| Xenopus tropicalis finished cDNA, clone TNeu109h19 40 8.5
38emb|AJ567187.1|GHI567187 Gossypium hirsutum microsatellite DNA m... 40 8.5
39gb|AC103610.9| Mus musculus chromosome 9, clone RP23-364M24, com... 40 8.5
40gb|AC027644.9| Homo sapiens BAC clone RP11-792A8 from 7, complet... 40 8.5
41gb|AC102432.9| Mus musculus chromosome 19, clone RP24-114A21, co... 40 8.5
42gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, co... 40 8.5
43gb|AC119413.16| Medicago truncatula clone mth2-19p2, complete se... 40 8.5
44emb|AL606517.14| Human DNA sequence from clone RP11-182I10 on ch... 40 8.5
45ref|XM_499784.1| Yarrowia lipolytica CLIB122, YALI0A05379g predi... 40 8.5
46emb|AL356956.11| Human DNA sequence from clone RP11-538A16 on ch... 40 8.5
47emb|AL356107.21| Human DNA sequence from clone RP11-484D5 on chr... 40 8.5
48emb|AL160269.14| Human DNA sequence from clone RP11-240L7 on chr... 40 8.5
49emb|AL031295.1|HS886K2 Human DNA sequence from clone RP5-886K2 o... 40 8.5
50emb|AL807373.1|NC21D9 Neurospora crassa DNA linkage group V cosm... 40 8.5
51gb|AC162385.4| Mus musculus 10 BAC RP24-397D18 (Roswell Park Can... 40 8.5
52emb|BX323600.8| Zebrafish DNA sequence from clone CH211-234C2 in... 40 8.5
53dbj|AK126239.1| Homo sapiens cDNA FLJ44251 fis, clone TKIDN2004458 40 8.5
54gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 8.5
55gb|AC091977.3| Homo sapiens chromosome 5 clone RP11-528L24, comp... 40 8.5
56gb|DP000004.1| Lemur catta target 1 genomic scaffold 40 8.5
57gb|AC138559.3| Lemur catta clone LB2-251E18, complete sequence 40 8.5
58gb|AC016550.6| Homo sapiens chromosome 5 clone CTC-261N6, comple... 40 8.5
59gb|AC099394.6| Homo sapiens BAC clone RP13-530H6 from 7, complet... 40 8.5
60gb|AC159748.5| Mus musculus 10 BAC RP24-363O22 (Roswell Park Can... 40 8.5
61gb|AC104135.5| Homo sapiens BAC clone RP11-588I4 from 2, complet... 40 8.5
62gb|AC156803.2| Mus musculus BAC clone RP23-6E6 from chromosome 1... 40 8.5
63gb|AC026950.15| Homo sapiens chromosome 8, clone RP11-555E9, com... 40 8.5
64gb|AC104782.5| Homo sapiens BAC clone RP11-30G7 from 2, complete... 40 8.5
65emb|AL592405.7| Mouse DNA sequence from clone RP23-358N17 on chr... 40 8.5
66gb|AC004459.1|AC004459 Homo sapiens BAC clone CTA-273G1 from 8q2... 40 8.5
67gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome 40 8.5
68emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 8.5
69emb|AL591665.15| Mouse DNA sequence from clone RP23-333A18 on ch... 40 8.5
70gb|AC165139.11| Mus musculus chromosome 5, clone RP23-424H17, co... 40 8.5 
>ref|XM_473722.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 876

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                       
Query: 240 gaaaatcagctgggtatggttttgtttcttttggaacaaaagaggaagcagaggctgccc 299
           ||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||| |
Sbjct: 632 gaaaatcagctggttatggttttgtttcttttgggacaaaagaggaagccgaagctgctc 691

                                                    
Query: 300 tcagcgaactcaatggaaaggaacttatggaaaggcctgtt 340
           |||  |||||| |||| ||||| ||||||| ||| ||||||
Sbjct: 692 tcactgaactcgatgggaaggagcttatgggaagacctgtt 732



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 168/212 (79%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaggccgccgccgtagtggagaagttcgacggccacgatatcaatggaagggtcatcaag 67
           ||||||||||| |  ||||||||| || ||  || |||| |||  ||||||  ||||| |
Sbjct: 394 gaggccgccgctgctgtggagaagctcaactccctcgatgtcatgggaaggaccatcagg 453

                                                                       
Query: 68  gtggaattttcgaagagcttcagaaaacctgctccaccatcatctccggataccattgtc 127
           ||||| ||||| ||||| ||||||||||||||||| ||  |  ||||||  || ||| | 
Sbjct: 454 gtggagttttcaaagagtttcagaaaacctgctcctcctcctcctccgggcacaattttg 513

                                                                       
Query: 128 gctaagtacaagctttatgtttccaatcttgcatggaaagcaaggtctgccgatctgaag 187
           |  | | |||| |||||||| ||||||||  |||||||||||||| || || || |||||
Sbjct: 514 gagaggcacaaactttatgtgtccaatctcccatggaaagcaagggctcccaatatgaag 573

                                           
Query: 188 gagttcttctcacagtttaacccagtttctgc 219
           ||||| |||||| | ||||| ||| |||||||
Sbjct: 574 gagtttttctcaaaatttaatccactttctgc 605
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>dbj|AK072902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147E13, full
           insert sequence
          Length = 1256

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                       
Query: 240 gaaaatcagctgggtatggttttgtttcttttggaacaaaagaggaagcagaggctgccc 299
           ||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||| |
Sbjct: 657 gaaaatcagctggttatggttttgtttcttttgggacaaaagaggaagccgaagctgctc 716

                                                    
Query: 300 tcagcgaactcaatggaaaggaacttatggaaaggcctgtt 340
           |||  |||||| |||| ||||| ||||||| ||| ||||||
Sbjct: 717 tcactgaactcgatgggaaggagcttatgggaagacctgtt 757



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 168/212 (79%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaggccgccgccgtagtggagaagttcgacggccacgatatcaatggaagggtcatcaag 67
           ||||||||||| |  ||||||||| || ||  || |||| |||  ||||||  ||||| |
Sbjct: 419 gaggccgccgctgctgtggagaagctcaactccctcgatgtcatgggaaggaccatcagg 478

                                                                       
Query: 68  gtggaattttcgaagagcttcagaaaacctgctccaccatcatctccggataccattgtc 127
           ||||| ||||| ||||| ||||||||||||||||| ||  |  ||||||  || ||| | 
Sbjct: 479 gtggagttttcaaagagtttcagaaaacctgctcctcctcctcctccgggcacaattttg 538

                                                                       
Query: 128 gctaagtacaagctttatgtttccaatcttgcatggaaagcaaggtctgccgatctgaag 187
           |  | | |||| |||||||| ||||||||  |||||||||||||| || || || |||||
Sbjct: 539 gagaggcacaaactttatgtgtccaatctcccatggaaagcaagggctcccaatatgaag 598

                                           
Query: 188 gagttcttctcacagtttaacccagtttctgc 219
           ||||| |||||| | ||||| ||| |||||||
Sbjct: 599 gagtttttctcaaaatttaatccactttctgc 630



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 455 ggtgaagataaacaggagtagtctaatagtactgtg 490
           ||||||||||||||||| |||| ||| | |||||||
Sbjct: 881 ggtgaagataaacaggaatagtttaacaatactgtg 916
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                            
Query: 240      gaaaatcagctgggtatggttttgtttcttttggaacaaaagaggaagcagaggctgccc 299
                ||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||| |
Sbjct: 29862797 gaaaatcagctggttatggttttgtttcttttgggacaaaagaggaagccgaagctgctc 29862738

                                     
Query: 300      tcagcgaactcaatggaaagg 320
                |||  |||||| |||| ||||
Sbjct: 29862737 tcactgaactcgatgggaagg 29862717



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 128/159 (80%)
 Strand = Plus / Minus

                                                                            
Query: 61       catcaaggtggaattttcgaagagcttcagaaaacctgctccaccatcatctccggatac 120
                ||||| |||||| ||||| ||||| ||||||||||||||||| ||  |  ||||||  ||
Sbjct: 29862982 catcagggtggagttttcaaagagtttcagaaaacctgctcctcctcctcctccgggcac 29862923

                                                                            
Query: 121      cattgtcgctaagtacaagctttatgtttccaatcttgcatggaaagcaaggtctgccga 180
                 ||| | |  | | |||| |||||||| ||||||||  |||||||||||||| || || |
Sbjct: 29862922 aattttggagaggcacaaactttatgtgtccaatctcccatggaaagcaagggctcccaa 29862863

                                                       
Query: 181      tctgaaggagttcttctcacagtttaacccagtttctgc 219
                | |||||||||| |||||| | ||||| ||| |||||||
Sbjct: 29862862 tatgaaggagtttttctcaaaatttaatccactttctgc 29862824



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 455      ggtgaagataaacaggagtagtctaatagtactgtg 490
                ||||||||||||||||| |||| ||| | |||||||
Sbjct: 29862300 ggtgaagataaacaggaatagtttaacaatactgtg 29862265
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>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06,
              complete sequence
          Length = 178552

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                          
Query: 240    gaaaatcagctgggtatggttttgtttcttttggaacaaaagaggaagcagaggctgccc 299
              ||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||| |
Sbjct: 143723 gaaaatcagctggttatggttttgtttcttttgggacaaaagaggaagccgaagctgctc 143664

                                   
Query: 300    tcagcgaactcaatggaaagg 320
              |||  |||||| |||| ||||
Sbjct: 143663 tcactgaactcgatgggaagg 143643



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 128/159 (80%)
 Strand = Plus / Minus

                                                                          
Query: 61     catcaaggtggaattttcgaagagcttcagaaaacctgctccaccatcatctccggatac 120
              ||||| |||||| ||||| ||||| ||||||||||||||||| ||  |  ||||||  ||
Sbjct: 143908 catcagggtggagttttcaaagagtttcagaaaacctgctcctcctcctcctccgggcac 143849

                                                                          
Query: 121    cattgtcgctaagtacaagctttatgtttccaatcttgcatggaaagcaaggtctgccga 180
               ||| | |  | | |||| |||||||| ||||||||  |||||||||||||| || || |
Sbjct: 143848 aattttggagaggcacaaactttatgtgtccaatctcccatggaaagcaagggctcccaa 143789

                                                     
Query: 181    tctgaaggagttcttctcacagtttaacccagtttctgc 219
              | |||||||||| |||||| | ||||| ||| |||||||
Sbjct: 143788 tatgaaggagtttttctcaaaatttaatccactttctgc 143750



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 455    ggtgaagataaacaggagtagtctaatagtactgtg 490
              ||||||||||||||||| |||| ||| | |||||||
Sbjct: 143226 ggtgaagataaacaggaatagtttaacaatactgtg 143191
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 250     tgggtatggttttgtttcttttgg 273
               ||||||||||||||||||||||||
Sbjct: 1355932 tgggtatggttttgtttcttttgg 1355955
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>emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in linkage group 8, complete
             sequence
          Length = 252440

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 484   tactgtgctgggagaaagttgca 506
             |||||||||||||||||||||||
Sbjct: 94192 tactgtgctgggagaaagttgca 94214
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>gb|AC160019.2| Gallus gallus BAC clone CH261-50H15 from chromosome unknown, complete
              sequence
          Length = 228494

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 181    tctgaaggagttcttctcacagt 203
              |||||||||||||||||||||||
Sbjct: 111312 tctgaaggagttcttctcacagt 111290
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>ref|XM_493895.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 513

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 1   cgccgaagaggccgccgccgt 21
           |||||||||||||||||||||
Sbjct: 433 cgccgaagaggccgccgccgt 413
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>gb|AY157024.2| Homo sapiens peroxisome proliferative activated receptor gamma (PPARG)
              gene, complete cds
          Length = 148828

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    aaaatcagctgggtatggttt 261
              |||||||||||||||||||||
Sbjct: 110391 aaaatcagctgggtatggttt 110371
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>gb|AC076968.38| Homo sapiens 12 BAC RP11-686F15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 203038

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 421    aggtgtggtggttggtgagagtggtgagg 449
              |||||||||||| |||| |||||||||||
Sbjct: 184944 aggtgtggtggtgggtgggagtggtgagg 184972
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>gb|AC004890.2| Homo sapiens PAC clone RP4-800G7 from 7, complete sequence
          Length = 164028

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    aaaatcagctgggtatggttt 261
              |||||||||||||||||||||
Sbjct: 123262 aaaatcagctgggtatggttt 123242
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>emb|AL591470.12| Human DNA sequence from clone RP11-263I4 on chromosome 9 Contains the
             3' end of a novel gene (KIAA0967), complete sequence
          Length = 60610

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 274   aacaaaagaggaagcagaggc 294
             |||||||||||||||||||||
Sbjct: 22347 aacaaaagaggaagcagaggc 22367
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>gb|AC148926.4| Pan troglodytes BAC clone RP43-136P16 from chromosome 7, complete
              sequence
          Length = 178320

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 241    aaaatcagctgggtatggttt 261
              |||||||||||||||||||||
Sbjct: 131015 aaaatcagctgggtatggttt 131035
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      cgccgaagaggccgccgccgt 21
              |||||||||||||||||||||
Sbjct: 937508 cgccgaagaggccgccgccgt 937528



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 380     gatggtgaagttgaaggagt 399
               ||||||||||||||||||||
Sbjct: 4383235 gatggtgaagttgaaggagt 4383216
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>gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C12 map 3p, complete sequence
          Length = 185608

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 241    aaaatcagctgggtatggttt 261
              |||||||||||||||||||||
Sbjct: 144709 aaaatcagctgggtatggttt 144729
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>gb|AC012531.11|AC012531 Homo sapiens, clone RP11-83K1, complete sequence
          Length = 171949

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 421   aggtgtggtggttggtgagagtggtgagg 449
             |||||||||||| |||| |||||||||||
Sbjct: 22694 aggtgtggtggtgggtgggagtggtgagg 22722
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>emb|AL844580.13| Mouse DNA sequence from clone RP23-367K9 on chromosome 2, complete
              sequence
          Length = 222380

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 495    gagaaagttgcagtagccttattga 519
              |||||||||| ||||||||||||||
Sbjct: 184621 gagaaagttgtagtagccttattga 184597
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>dbj|AK067943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122C02, full
           insert sequence
          Length = 865

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 1   cgccgaagaggccgccgccgt 21
           |||||||||||||||||||||
Sbjct: 498 cgccgaagaggccgccgccgt 478
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>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04
          Length = 175439

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     cgccgaagaggccgccgccgt 21
             |||||||||||||||||||||
Sbjct: 27905 cgccgaagaggccgccgccgt 27925
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>emb|CT573501.1| Medicago truncatula chromosome 5 clone mth2-60o20, COMPLETE SEQUENCE
          Length = 114271

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 217   tgcaaatatagtctttgatgataga 241
             ||||||| |||||||||||||||||
Sbjct: 52030 tgcaaatttagtctttgatgataga 52054
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>gb|AC090947.2| Homo sapiens chromosome 3 clone RP11-30G23 map 3p, complete sequence
          Length = 166049

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 241    aaaatcagctgggtatggttt 261
              |||||||||||||||||||||
Sbjct: 100492 aaaatcagctgggtatggttt 100512
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>gb|AC093174.2| Homo sapiens chromosome 3 clone RP11-167M22 map 3p, complete sequence
          Length = 135675

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    aaaatcagctgggtatggttt 261
              |||||||||||||||||||||
Sbjct: 126517 aaaatcagctgggtatggttt 126497
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>gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, complete sequence
          Length = 163721

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 408   atgatcaggcagaaggtgtggtgg 431
             ||||||||||||||| ||||||||
Sbjct: 67258 atgatcaggcagaagctgtggtgg 67235
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>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     gaaaacctgctccaccatca 109
              ||||||||||||||||||||
Sbjct: 742769 gaaaacctgctccaccatca 742750
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>gb|AF053356.1| Homo sapiens chromosome 7q22 sequence, complete sequence
          Length = 227968

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    gaaaatcagctgggtatggt 259
              ||||||||||||||||||||
Sbjct: 153450 gaaaatcagctgggtatggt 153469
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>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08,
            complete sequence
          Length = 144781

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  gatggtgaagttgaaggagt 399
            ||||||||||||||||||||
Sbjct: 4859 gatggtgaagttgaaggagt 4840
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>ref|XM_599203.2| PREDICTED: Bos taurus similar to Jumonji, AT rich interactive
           domain 1B (RBP2-like) (LOC520951), partial mRNA
          Length = 279

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 410 gatcaggcagaaggtgtggt 429
           ||||||||||||||||||||
Sbjct: 102 gatcaggcagaaggtgtggt 83
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>ref|XM_612405.2| PREDICTED: Bos taurus similar to Jumonji, AT rich interactive
           domain 1B (RBP2-like) (LOC540633), mRNA
          Length = 6140

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 410 gatcaggcagaaggtgtggt 429
           ||||||||||||||||||||
Sbjct: 927 gatcaggcagaaggtgtggt 908
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>ref|XM_323533.1| Neurospora crassa OR74A predicted protein (NCU04194.1) partial mRNA
          Length = 1719

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 443 ggtgaggttgaaggtgaaga 462
           ||||||||||||||||||||
Sbjct: 399 ggtgaggttgaaggtgaaga 380
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>ref|XM_956061.1| Neurospora crassa OR74A hypothetical protein (NCU04194.1) partial
           mRNA
          Length = 1719

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 443 ggtgaggttgaaggtgaaga 462
           ||||||||||||||||||||
Sbjct: 399 ggtgaggttgaaggtgaaga 380
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>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    ataccattgtcgctaagtac 136
              ||||||||||||||||||||
Sbjct: 976536 ataccattgtcgctaagtac 976555
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>gb|DQ496110.1| Homo sapiens transferrin receptor 2 (TFR2) gene, complete cds
          Length = 21608

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   gaaaatcagctgggtatggt 259
             ||||||||||||||||||||
Sbjct: 19627 gaaaatcagctgggtatggt 19646
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>gb|AE009131.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 157
            of 256 of the complete sequence
          Length = 11010

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    cgccgaagaggccgccgccg 20
            ||||||||||||||||||||
Sbjct: 6632 cgccgaagaggccgccgccg 6613
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>gb|AC108947.5| Mus musculus BAC clone RP23-140A11 from chromosome 13, complete sequence
          Length = 187401

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 187    ggagttcttctcacagtttaaccc 210
              |||||||||||||||||| |||||
Sbjct: 134154 ggagttcttctcacagttcaaccc 134177
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>gb|AC164637.3| Mus musculus BAC clone RP23-128I20 from chromosome 13, complete sequence
          Length = 222651

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 605    atgatgctgttaagaaaaat 624
              ||||||||||||||||||||
Sbjct: 205231 atgatgctgttaagaaaaat 205250
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>gb|AF117829.3| Homo sapiens chromosome 8 multiple clones map q21.3, complete sequence
          Length = 320187

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    gaaaatcagctgggtatggt 259
              ||||||||||||||||||||
Sbjct: 120088 gaaaatcagctgggtatggt 120107
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>emb|CT025291.2| Xenopus tropicalis finished cDNA, clone TNeu109h19
          Length = 3086

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 379  tgatggtgaagttgaaggag 398
            ||||||||||||||||||||
Sbjct: 1851 tgatggtgaagttgaaggag 1870
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>emb|AJ567187.1|GHI567187 Gossypium hirsutum microsatellite DNA mGhCIR242, clone CIR242
          Length = 390

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 252 ggtatggttttgtttcttttggaacaaaagag 283
           |||| ||||||||||| |||| ||||||||||
Sbjct: 324 ggtacggttttgtttcctttgtaacaaaagag 293
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>gb|AC103610.9| Mus musculus chromosome 9, clone RP23-364M24, complete sequence
          Length = 205900

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   tggaacaaaagaggaagcag 290
             ||||||||||||||||||||
Sbjct: 75876 tggaacaaaagaggaagcag 75857
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>gb|AC027644.9| Homo sapiens BAC clone RP11-792A8 from 7, complete sequence
          Length = 188207

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 443    ggtgaggttgaaggtgaagataaa 466
              ||||||||||||||||| ||||||
Sbjct: 142628 ggtgaggttgaaggtgaggataaa 142651
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>gb|AC102432.9| Mus musculus chromosome 19, clone RP24-114A21, complete sequence
          Length = 199240

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   atgatcaggcagaaggtgtggtgg 431
             ||||||||||||||| ||||||||
Sbjct: 46372 atgatcaggcagaagctgtggtgg 46395
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>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence
          Length = 215356

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 408   atgatcaggcagaaggtgtggtgg 431
             ||||||||||||||| ||||||||
Sbjct: 84692 atgatcaggcagaagctgtggtgg 84669
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>gb|AC119413.16| Medicago truncatula clone mth2-19p2, complete sequence
          Length = 113431

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 242   aaatcagctgggtatggttttgtttctt 269
             ||||| ||||||||||| ||||||||||
Sbjct: 96258 aaatctgctgggtatggatttgtttctt 96231
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>emb|AL606517.14| Human DNA sequence from clone RP11-182I10 on chromosome 1 Contains the
             5' end of the JAK1 gene for anus kinase 1 (a protein
             tyrosine kinase), a NADH dehydrogenase (ubiquinone) 1
             alpha subcomplex 4 9kDa (NDUFA4) pseudogene, a SIPL
             protein (SIPL) pseudogene, part of a novel gene, a solute
             carrier family 2 (facilitated glucose transporter) member
             14 (SLC2A14) pseudogene and a CpG island, complete
             sequence
          Length = 74530

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   atggttttgtttcttttgga 274
             ||||||||||||||||||||
Sbjct: 57854 atggttttgtttcttttgga 57835
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>ref|XM_499784.1| Yarrowia lipolytica CLIB122, YALI0A05379g predicted mRNA
          Length = 2361

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 441 gtggtgaggttgaaggtgaa 460
           ||||||||||||||||||||
Sbjct: 53  gtggtgaggttgaaggtgaa 34
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>emb|AL356956.11| Human DNA sequence from clone RP11-538A16 on chromosome 6 Contains an
              activating transcription factor 1 (ATF1) pseudogene,
              complete sequence
          Length = 194264

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 555    caaaatagaggtgataattg 574
              ||||||||||||||||||||
Sbjct: 147477 caaaatagaggtgataattg 147458
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>emb|AL356107.21| Human DNA sequence from clone RP11-484D5 on chromosome 13 Contains the
             gene for a novel protein similar to transforming growth
             factor beta-stimulated protein (TSC-22),  SMARCE1 (SWI/SNF
             related, matrix associated, actin dependent regulator of
             chromatin, subfamily e, member 1 ) pseudogene and a CpG
             island, complete sequence
          Length = 140499

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 236   gatagaaaatcagctgggtatggt 259
             ||||||||||||||||||| ||||
Sbjct: 87935 gatagaaaatcagctgggtgtggt 87912
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>emb|AL160269.14| Human DNA sequence from clone RP11-240L7 on chromosome 9 Contains the
             3' end of a gene for a novel protein similar to a zinc
             finger protein, the gene for a nucleotide-sugar
             transporter (SQV7L) the HSD17B3 gene for hydroxysteroid
             (17-beta) dehydrogenase 3, 2 novel genes and two CpG
             islands, complete sequence
          Length = 169646

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 484   tactgtgctgggagaaagtt 503
             ||||||||||||||||||||
Sbjct: 10573 tactgtgctgggagaaagtt 10592
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>emb|AL031295.1|HS886K2 Human DNA sequence from clone RP5-886K2 on chromosome 1p35.1-36.12
             Contains a neuronal thread protein (AD7C-NTP) pseudogene,
             the TCEB3 gene for  transcription elongation factor B
             (SIII), polypeptide 3 (110kDa, elongin A), two novel
             genes, a novel gene (HT014), the LYPLA2  gene for
             lysophospholipase II, the GALE gene for
             UDP-galactose-4-epimerase and the HMGCL gene for
             3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase
             (hydroxymethylglutaricaciduria), complete sequence
          Length = 124001

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   gaaaatcagctgggtatggt 259
             ||||||||||||||||||||
Sbjct: 36392 gaaaatcagctgggtatggt 36411
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>emb|AL807373.1|NC21D9 Neurospora crassa DNA linkage group V cosmid contig 21D9
          Length = 55380

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   ggtgaggttgaaggtgaaga 462
             ||||||||||||||||||||
Sbjct: 31677 ggtgaggttgaaggtgaaga 31696
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>gb|AC162385.4| Mus musculus 10 BAC RP24-397D18 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 202541

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   acaagctttatgtttccaat 154
             ||||||||||||||||||||
Sbjct: 49355 acaagctttatgtttccaat 49336
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>emb|BX323600.8| Zebrafish DNA sequence from clone CH211-234C2 in linkage group 14,
            complete sequence
          Length = 100795

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 254  tatggttttgtttcttttgg 273
            ||||||||||||||||||||
Sbjct: 7876 tatggttttgtttcttttgg 7857
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>dbj|AK126239.1| Homo sapiens cDNA FLJ44251 fis, clone TKIDN2004458
          Length = 2806

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 255  atggttttgtttcttttgga 274
            ||||||||||||||||||||
Sbjct: 2225 atggttttgtttcttttgga 2244
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       cgccgaagaggccgccgccg 20
               ||||||||||||||||||||
Sbjct: 1737739 cgccgaagaggccgccgccg 1737720
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>gb|AC091977.3| Homo sapiens chromosome 5 clone RP11-528L24, complete sequence
          Length = 183494

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   tggttttgtttcttttggaa 275
             ||||||||||||||||||||
Sbjct: 60196 tggttttgtttcttttggaa 60215
to top
>gb|DP000004.1| Lemur catta target 1 genomic scaffold
          Length = 1399362

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    tgtttcttttggaacaaaag 281
              ||||||||||||||||||||
Sbjct: 630719 tgtttcttttggaacaaaag 630738
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>gb|AC138559.3| Lemur catta clone LB2-251E18, complete sequence
          Length = 171058

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    tgtttcttttggaacaaaag 281
              ||||||||||||||||||||
Sbjct: 128454 tgtttcttttggaacaaaag 128473
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>gb|AC016550.6| Homo sapiens chromosome 5 clone CTC-261N6, complete sequence
          Length = 88581

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 424   tgtggtggttggtgagagtggtga 447
             ||||||||||||||| ||||||||
Sbjct: 64976 tgtggtggttggtgacagtggtga 64953
to top
>gb|AC099394.6| Homo sapiens BAC clone RP13-530H6 from 7, complete sequence
          Length = 60024

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   gaaaatcagctgggtatggt 259
             ||||||||||||||||||||
Sbjct: 21031 gaaaatcagctgggtatggt 21012
to top
>gb|AC159748.5| Mus musculus 10 BAC RP24-363O22 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 131761

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    acaagctttatgtttccaat 154
              ||||||||||||||||||||
Sbjct: 123369 acaagctttatgtttccaat 123350
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>gb|AC104135.5| Homo sapiens BAC clone RP11-588I4 from 2, complete sequence
          Length = 71936

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   atcagctgggtatggttttg 263
             ||||||||||||||||||||
Sbjct: 35243 atcagctgggtatggttttg 35224
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>gb|AC156803.2| Mus musculus BAC clone RP23-6E6 from chromosome 13, complete sequence
          Length = 226345

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 605    atgatgctgttaagaaaaat 624
              ||||||||||||||||||||
Sbjct: 114752 atgatgctgttaagaaaaat 114733
to top
>gb|AC026950.15| Homo sapiens chromosome 8, clone RP11-555E9, complete sequence
          Length = 165051

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 525   gtgcagatgcggaaactcat 544
             ||||||||||||||||||||
Sbjct: 59937 gtgcagatgcggaaactcat 59918
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>gb|AC104782.5| Homo sapiens BAC clone RP11-30G7 from 2, complete sequence
          Length = 150010

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 241  aaaatcagctgggtatggtt 260
            ||||||||||||||||||||
Sbjct: 2983 aaaatcagctgggtatggtt 3002
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>emb|AL592405.7| Mouse DNA sequence from clone RP23-358N17 on chromosome 2, complete
             sequence
          Length = 165818

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   aaaatcagctgggtatggtt 260
             ||||||||||||||||||||
Sbjct: 76624 aaaatcagctgggtatggtt 76643
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>gb|AC004459.1|AC004459 Homo sapiens BAC clone CTA-273G1 from 8q21, complete sequence
          Length = 41798

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   gaaaatcagctgggtatggt 259
             ||||||||||||||||||||
Sbjct: 22066 gaaaatcagctgggtatggt 22085
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>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 376     ggctgatggtgaagttgaag 395
               ||||||||||||||||||||
Sbjct: 1405095 ggctgatggtgaagttgaag 1405114
to top
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 441    gtggtgaggttgaaggtgaa 460
              ||||||||||||||||||||
Sbjct: 558600 gtggtgaggttgaaggtgaa 558619
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>emb|AL591665.15| Mouse DNA sequence from clone RP23-333A18 on chromosome 2, complete
             sequence
          Length = 181419

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   cacagtttaacccagtttct 217
             ||||||||||||||||||||
Sbjct: 14141 cacagtttaacccagtttct 14160
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>gb|AC165139.11| Mus musculus chromosome 5, clone RP23-424H17, complete sequence
          Length = 176075

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   ttggaacaaaagaggaagca 289
             ||||||||||||||||||||
Sbjct: 32008 ttggaacaaaagaggaagca 31989


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,264,415
Number of Sequences: 3902068
Number of extensions: 7264415
Number of successful extensions: 161378
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 160977
Number of HSP's gapped (non-prelim): 401
length of query: 626
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 603
effective length of database: 17,143,297,704
effective search space: 10337408515512
effective search space used: 10337408515512
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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