ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags25a14 |
|---|---|
| Clone Library Name | barley_pub |
>QUA1_ARATH (Q9LSG3) Glycosyltransferase QUASIMODO1 (EC 2.4.1.-)| Length = 559 Score = 374 bits (959), Expect = e-103 Identities = 173/202 (85%), Positives = 186/202 (92%) Frame = +1 Query: 1 NLGAMQVIIRLMDLQGAHYEVKAYEDYKFLNSSYVPVLRQLESANLQKFYFENKLENATK 180 NLGAMQV+ +L + +GAH EVKA EDY FLNSSYVPVL+QLESANLQKFYFENKLENATK Sbjct: 288 NLGAMQVMFKLKEYKGAHVEVKAVEDYTFLNSSYVPVLKQLESANLQKFYFENKLENATK 347 Query: 181 DASNMKFRNPKYLSMLNHLRFYLPEMYPKLQKILFLDDDVVVQRDLTGLWKIDMDGKVNG 360 D +NMKFRNPKYLS+LNHLRFYLPEMYPKL +ILFLDDDVVVQ+DLTGLW+IDMDGKVNG Sbjct: 348 DTTNMKFRNPKYLSILNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWEIDMDGKVNG 407 Query: 361 AVETCFGSFHRYWQYMNFSHPLIKAKFNPNACGWAYGMNFFDLNSWRREKSTEQYHYWQT 540 AVETCFGSFHRY QYMNFSHPLIK KFNP AC WAYGMNFFDL++WRREK TE+YHYWQ Sbjct: 408 AVETCFGSFHRYAQYMNFSHPLIKEKFNPKACAWAYGMNFFDLDAWRREKCTEEYHYWQN 467 Query: 541 QNENRLLWKLGTLPPGLITFYS 606 NENR LWKLGTLPPGLITFYS Sbjct: 468 LNENRALWKLGTLPPGLITFYS 489
>GLTR_ARATH (Q9FWA4) Probable glycosyltransferase At3g02350 (EC 2.4.1.-)| Length = 561 Score = 348 bits (892), Expect = 9e-96 Identities = 160/203 (78%), Positives = 181/203 (89%), Gaps = 1/203 (0%) Frame = +1 Query: 1 NLGAMQVIIRLMDL-QGAHYEVKAYEDYKFLNSSYVPVLRQLESANLQKFYFENKLENAT 177 NL AM+V ++ L +GAH E+K+ ED+KFLNSSY PVLRQLESA LQKFYFEN+ ENAT Sbjct: 289 NLAAMKVWFKMRPLDRGAHVEIKSVEDFKFLNSSYAPVLRQLESAKLQKFYFENQAENAT 348 Query: 178 KDASNMKFRNPKYLSMLNHLRFYLPEMYPKLQKILFLDDDVVVQRDLTGLWKIDMDGKVN 357 KD+ N+KF+NPKYLSMLNHLRFYLPEMYPKL KILFLDDDVVVQ+D+TGLWKI++DGKVN Sbjct: 349 KDSHNLKFKNPKYLSMLNHLRFYLPEMYPKLNKILFLDDDVVVQKDVTGLWKINLDGKVN 408 Query: 358 GAVETCFGSFHRYWQYMNFSHPLIKAKFNPNACGWAYGMNFFDLNSWRREKSTEQYHYWQ 537 GAVETCFGSFHRY QY+NFSHPLIK FNP+AC WA+GMN FDLN+WRREK T+QYHYWQ Sbjct: 409 GAVETCFGSFHRYGQYLNFSHPLIKENFNPSACAWAFGMNIFDLNAWRREKCTDQYHYWQ 468 Query: 538 TQNENRLLWKLGTLPPGLITFYS 606 NE+R LWKLGTLPPGLITFYS Sbjct: 469 NLNEDRTLWKLGTLPPGLITFYS 491
>Y258_HAEIN (P43974) Putative glycosyl transferase HI0258 (EC 2.-.-.-)| Length = 330 Score = 37.7 bits (86), Expect = 0.026 Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 3/158 (1%) Frame = +1 Query: 88 LNSSYVPVLRQLESANLQKFYFENKLENATKDASNMKFRNPKYLSMLNHLRFYLPEMYPK 267 +N ++ L SA K +F L D N + Y+S+ + R L + Sbjct: 77 INQENKTIINNLASAYSCKVFF---LPVCESDFQNFP-KTIDYISLATYARLNLTKYIKN 132 Query: 268 LQKILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFGSFHRYWQYMNFSHPLIKAKFNP 447 ++K +++D D + L LW ID+ N + C +F ++ + K Sbjct: 133 IEKAIYIDVDTLTNSSLQELWNIDI---TNYYLAACRDTF------IDVKNEAYKKTIGL 183 Query: 448 NACGWAY---GMNFFDLNSWRREKSTEQYHYWQTQNEN 552 G++Y G+ +LN W+ E ++ W + N Sbjct: 184 E--GYSYFNAGILLINLNKWKEENIFQKSINWMNKYNN 219
>UGGG2_HUMAN (Q9NYU1) UDP-glucose:glycoprotein glucosyltransferase 2 precursor (EC| 2.4.1.-) (UDP-glucose ceramide glucosyltransferase-like 1) (UDP--Glc:glycoprotein glucosyltransferase 2) (HUGT2) Length = 1516 Score = 36.6 bits (83), Expect = 0.058 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 5/92 (5%) Frame = +1 Query: 244 YLPEMYP-KLQKILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFG----SFHRYWQYM 408 +L ++P + KI+F+D D +V+ DL L D+DG G C +R+W+ Sbjct: 1317 FLDVLFPLAVDKIIFVDADQIVRHDLKELRDFDLDGAPYGYTPFCDSRREMDGYRFWKTG 1376 Query: 409 NFSHPLIKAKFNPNACGWAYGMNFFDLNSWRR 504 ++ L++ K++ +A + DL +RR Sbjct: 1377 YWASHLLRRKYHISA------LYVVDLKKFRR 1402
>GSPA_BACSU (P25148) General stress protein A| Length = 286 Score = 33.9 bits (76), Expect = 0.38 Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Frame = +1 Query: 214 YLSMLNHLRFYLPEMYP--KLQKILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFGSF 387 +++ + R +P++ +++++++D D +V D++ LW +D+ AVE Sbjct: 84 HITKAAYYRISIPDLIKDESIKRMIYIDCDALVLEDISKLWDLDIAPYTVAAVED--AGQ 141 Query: 388 HRYWQYMNFSHPLIKAKFNPNACGWAYGMNFFDLNSWRREKSTEQ 522 H + MN + FN G+ D SWR++ TE+ Sbjct: 142 HERLKEMNVTD--TGKYFNS-------GIMIIDFESWRKQNITEK 177
>LGR8_HUMAN (Q8WXD0) Relaxin receptor 2 (Leucine-rich repeat-containing| G-protein coupled receptor 8) (G-protein coupled receptor affecting testicular descent) (G-protein coupled receptor 106) Length = 754 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Frame = +1 Query: 85 FLNSSYVPVLRQLESANLQKFYFEN---KLENATKDASNMKFRNPKYLSMLNHLRFYLP 252 +L+ + L+QL+S +L++ N ++ K+ S++ F+N +Y S H+R +P Sbjct: 343 YLHKNQFESLKQLQSLDLERIEIPNINTRMFQPMKNLSHIYFKNFRYCSYAPHVRICMP 401
>RIMM_BRUSU (P66652) Probable 16S rRNA-processing protein rimM| Length = 189 Score = 30.4 bits (67), Expect = 4.2 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +1 Query: 286 LDDDVVVQRDLTGLWKIDMDGKVNGAVETCF 378 LD+D Q DL GL +D DGK G V F Sbjct: 94 LDEDEFFQTDLIGLEAVDGDGKSYGVVSAIF 124
>RIMM_BRUME (P66651) Probable 16S rRNA-processing protein rimM| Length = 189 Score = 30.4 bits (67), Expect = 4.2 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +1 Query: 286 LDDDVVVQRDLTGLWKIDMDGKVNGAVETCF 378 LD+D Q DL GL +D DGK G V F Sbjct: 94 LDEDEFFQTDLIGLEAVDGDGKSYGVVSAIF 124
>UGGG1_RAT (Q9JLA3) UDP-glucose:glycoprotein glucosyltransferase 1 precursor (EC| 2.4.1.-) (UDP-glucose ceramide glucosyltransferase-like 1) (UDP--Glc:glycoprotein glucosyltransferase) (RUGT) Length = 1527 Score = 30.0 bits (66), Expect = 5.4 Identities = 28/136 (20%), Positives = 59/136 (43%), Gaps = 13/136 (9%) Frame = +1 Query: 85 FLNSSYVPVLRQLESANLQKFYFENKLENATKDASNMKFRNPKYLSMLNHLR-------- 240 FL + P ++ +K+ F+ +L ++++ P++L + Sbjct: 1266 FLKNYLSPTFKEFIPYMAKKYNFQYEL---------VQYKWPRWLHQQTEKQRIIWGYKI 1316 Query: 241 FYLPEMYPKL-QKILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFG----SFHRYWQY 405 +L ++P + K LF+D D +V+ DL L ++DG G C +R+W+ Sbjct: 1317 LFLDVLFPLVVDKFLFVDADQIVRTDLKELRDFNLDGAPYGYTPFCDSRREMDGYRFWKS 1376 Query: 406 MNFSHPLIKAKFNPNA 453 ++ L K++ +A Sbjct: 1377 GYWASHLAGRKYHISA 1392
>UGGG1_MOUSE (Q6P5E4) UDP-glucose:glycoprotein glucosyltransferase 1 precursor (EC| 2.4.1.-) (UDP-glucose ceramide glucosyltransferase-like 1) (UDP--Glc:glycoprotein glucosyltransferase) Length = 1527 Score = 30.0 bits (66), Expect = 5.4 Identities = 28/136 (20%), Positives = 59/136 (43%), Gaps = 13/136 (9%) Frame = +1 Query: 85 FLNSSYVPVLRQLESANLQKFYFENKLENATKDASNMKFRNPKYLSMLNHLR-------- 240 FL + P ++ +K+ F+ +L ++++ P++L + Sbjct: 1266 FLKNYLSPTFKEFIPYMAKKYNFQYEL---------VQYKWPRWLHQQTEKQRIIWGYKI 1316 Query: 241 FYLPEMYPKL-QKILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFG----SFHRYWQY 405 +L ++P + K LF+D D +V+ DL L ++DG G C +R+W+ Sbjct: 1317 LFLDVLFPLVVDKFLFVDADQIVRTDLKELRDFNLDGAPYGYTPFCDSRREMDGYRFWKS 1376 Query: 406 MNFSHPLIKAKFNPNA 453 ++ L K++ +A Sbjct: 1377 GYWASHLAGRKYHISA 1392
>YG4B_YEAST (P46951) Hypothetical 95.4 kDa protein in SNG1-PMT6 intergenic| region Length = 817 Score = 29.6 bits (65), Expect = 7.1 Identities = 12/55 (21%), Positives = 26/55 (47%) Frame = +1 Query: 79 YKFLNSSYVPVLRQLESANLQKFYFENKLENATKDASNMKFRNPKYLSMLNHLRF 243 Y F+ SS + +E + F F+N +N+ + F+ L+ +N +++ Sbjct: 292 YNFIISSMEKTFQSIEVSKTAMFLFQNLSDNSNDEIKKKTFKRESILNFVNFVKY 346
>UGGG1_HUMAN (Q9NYU2) UDP-glucose:glycoprotein glucosyltransferase 1 precursor (EC| 2.4.1.-) (UDP-glucose ceramide glucosyltransferase-like 1) (UDP--Glc:glycoprotein glucosyltransferase) (HUGT1) Length = 1531 Score = 29.6 bits (65), Expect = 7.1 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%) Frame = +1 Query: 244 YLPEMYPKL-QKILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFG----SFHRYWQYM 408 +L ++P + K LF+D D +V+ DL L ++DG G C +R+W+ Sbjct: 1318 FLDVLFPLVVDKFLFVDADQIVRTDLKELRDFNLDGAPYGYTPFCDSRREMDGYRFWKSG 1377 Query: 409 NFSHPLIKAKFNPNA 453 ++ L K++ +A Sbjct: 1378 YWASHLAGRKYHISA 1392
>SYY2_BACSU (P25151) Tyrosyl-tRNA synthetase 2 (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS 2) Length = 412 Score = 29.6 bits (65), Expect = 7.1 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = -1 Query: 507 LPPPRIKIKEVHAISPATCIRIELCFDKGVREVHI 403 +PP +K K V +IS T ++I+L D +VH+ Sbjct: 30 IPPEELKAKLVKSISTGTPLKIKLGLDPSAPDVHL 64
>RFAJ_ECOLI (P27129) Lipopolysaccharide 1,2-glucosyltransferase (EC 2.4.1.58)| Length = 338 Score = 29.6 bits (65), Expect = 7.1 Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 2/87 (2%) Frame = +1 Query: 268 LQKILFLDDDVVVQRDLTGLWKIDMDGKVNGAVETCFGSFHRYWQYMNFSHPLIKAKFNP 447 L ++L+LD DVV + D++ L + ++G V V+ + +P Sbjct: 123 LDRLLYLDADVVCKGDISQLLHLGLNGAVAAVVK----------DVEPMQEKAVSRLSDP 172 Query: 448 NACGWAY--GMNFFDLNSWRREKSTEQ 522 G + G+ + DL W K TE+ Sbjct: 173 ELLGQYFNSGVVYLDLKKWADAKLTEK 199
>SH3G3_MOUSE (Q62421) SH3-containing GRB2-like protein 3 (SH3 domain protein 2C)| (SH3p13) Length = 347 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 4/56 (7%) Frame = -1 Query: 345 IHVNLPQSCEIPLYDDIIIQEKNLLQLGVHLRQVESQVI----KHRKILGIPELHI 190 + +N+ Q+ PL ++Q+K+L ++G HLR++E + + K R++ IPE I Sbjct: 131 LDINVKQTFIDPLQ---LLQDKDLKEIGHHLRKLEGRRLDYDYKKRRVGKIPEEEI 183
>RIMM_AGRT5 (Q8UBZ8) Probable 16S rRNA-processing protein rimM| Length = 188 Score = 29.3 bits (64), Expect = 9.3 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +1 Query: 286 LDDDVVVQRDLTGLWKIDMDGKVNGAVETCF 378 LDDD DL GL +D +GK GAV + Sbjct: 94 LDDDEFYYADLEGLEAVDAEGKSYGAVSAVY 124
>APT_PSEST (P47202) Adenine phosphoribosyltransferase (EC 2.4.2.7) (APRT)| Length = 182 Score = 29.3 bits (64), Expect = 9.3 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = -1 Query: 366 YCSIHLPIHVN-LPQSCEIPLYDDIIIQEKNLLQLGVHLRQVESQVIKHRKILGIPEL 196 Y HL IH + L + + L+DD+I LL +R++ + + + I+ +PEL Sbjct: 101 YGEAHLEIHADSLCEGDSVLLFDDLIATGGTLLAAAQLVRRMRANIHEAAAIIDLPEL 158 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,806,968 Number of Sequences: 219361 Number of extensions: 1851272 Number of successful extensions: 5145 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 4984 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5144 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
