>FOXC2_HUMAN (Q99958) Forkhead box protein C2 (Forkhead-related protein FKHL14)|
           (Mesenchyme fork head protein 1) (MFH-1 protein)
           (Transcription factor FKH-14)
          Length = 501

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 276 QAPEPAPRCRLLPVPHQGAEGSEAAAQCQSRGGDQRGVPCH 398
           QAP P P  +  P P  GA  ++AA+   +  GD   +P H
Sbjct: 398 QAPPPPPAPQPQPTPQPGAAAAQAASWYLNHSGDLNHLPGH 438

>TAB2_BRARE (Q5RFW2) Mitogen-activated protein kinase kinase kinase|
           7-interacting protein 2 homolog
          Length = 711

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = -3

Query: 269 RRSSTPASACRWRSAARIRCSSPSSFEPSGCCTMAVAPG 153
           +R S  +S  R  SA R  CSS SS  PS C ++A + G
Sbjct: 311 QRGSGSSSLLRSSSAPRSACSSTSSSCPSSCTSLASSSG 349

>ATPB_MYCPN (Q50331) ATP synthase beta chain (EC 3.6.3.14)|
          Length = 475

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 20/63 (31%), Positives = 31/63 (49%)
 Frame = +1

Query: 337 DLKLLLSANLAEVINAVFPVITYRKPANTILVPNRQGKRKPGANHSHYKRLLGIARLLSQ 516
           D K +L  N+A +   +FP I   +  + +L PN  G        +HYK  LG+  +L +
Sbjct: 324 DAKTVLDRNIAAL--GIFPAINPLESTSRLLDPNIVGI-------NHYKVALGVQNILQR 374

Query: 517 MAE 525
            AE
Sbjct: 375 FAE 377

>THII_YERPE (Q8ZC49) Thiamine biosynthesis protein thiI|
          Length = 483

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -2

Query: 414 RLTISDDREHRVDHLREIGTEQQLQIPPHLDEVLEVGGTAVLVPVLVDEALEH 256
           R  IS D+EH ++  R+IGTE   +  P    V+    T   V   ++E   H
Sbjct: 315 RPLISHDKEHIINLARQIGTEDFAKTMPEYCGVISKSPTVKAVKAKIEEEESH 367

>BMRU_BACSU (P39074) Protein bmrU|
          Length = 297

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
 Frame = +1

Query: 211 HRMRAALRHLQAEAGV--------LERLVYKHRNQHRGAAYFQYLIKVRRDLKLLLSAN- 363
           H   AA ++++   G         L+ ++ K   +   A +F   I    D   +L  + 
Sbjct: 10  HNGNAANKNIEKALGAVVPVLSHHLDEVIIKQTKKKDHAYHFCRSIDDSVDTVFILGGDG 69

Query: 364 -LAEVINAVFPVITYRKPANTILVPNRQGKRKPGANHSHYKRLLGIARLLSQMAEPVMKG 540
            + + INA+  +   RKPA  IL         PG   + + R+LGI + L++ AE +M G
Sbjct: 70  TIHQCINAISAL--ERKPAVGIL---------PGGTSNDFSRVLGIPQNLAKAAEALMAG 118

>PROA_NITMU (Q2YBP9) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)|
           (Glutamate-5-semialdehyde dehydrogenase)
           (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
           dehydrogenase)
          Length = 421

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 217 MRAALRHLQAEAGVLERLVYKHRNQHRGAAYFQYLIKVRRDLKLLLSANLAEVINA 384
           ++  +  +  EA    RL+ K     +  A  Q  + ++RD + LL+AN  +V NA
Sbjct: 6   IKTYMHSIGREARAASRLIAKAETAAKNRALTQMAVAIKRDEQQLLAANARDVENA 61

>K1688_MOUSE (P59281) Protein KIAA1688|
          Length = 1107

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +1

Query: 379 NAVFPVITYRKPANTILVPNRQGKRKPGANHSHYKRLLGIARLLSQMAEPVMKGAVQIS 555
           + VFP  T RKP++   + N   K         ++R + IA +L+  +E + K  +  S
Sbjct: 670 SCVFPTFTLRKPSSETDIENWASKHFNKHTQGLFRRKVSIANMLAWSSESIKKPMIVTS 728

>K1688_HUMAN (Q9C0H5) Protein KIAA1688|
          Length = 1083

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +1

Query: 379 NAVFPVITYRKPANTILVPNRQGKRKPGANHSHYKRLLGIARLLSQMAEPVMKGAVQIS 555
           + VFP  T RKP++   + N   K         ++R + IA +L+  +E + K  +  S
Sbjct: 677 SCVFPTFTLRKPSSETDIENWASKHFNKHTQGLFRRKVSIANMLAWSSESIKKPMIVTS 735

>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 427

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +1

Query: 40  WRPCQAGGGRLVTSPALGQQQVGKSAPISLI*DMAATKPGATAMVQHPEGSKEEGEEHRM 219
           WRP + GGG   +    G++ VG+  P            G T+  + P   +EE E+ R 
Sbjct: 222 WRPRRLGGGLGTSRVGGGEEIVGEQQP-----------QGRTSQSEEPSRPREEREKSRE 270

Query: 220 RAALRHLQAE 249
           +   R    E
Sbjct: 271 KGKERERSRE 280

>LIFO_PSEWI (O05938) Lipase chaperone (Lipase foldase) (Lipase helper protein)|
           (Lipase activator protein) (Lipase modulator)
          Length = 352

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = +1

Query: 55  AGGGRLVTSPALGQQQVGKSAPISLI*DMAATKPGATAMVQHPEGSKEEGEEHRMRAALR 234
           A  GR +  PALGQ        ISL+ D    K  + A++Q P  ++++ E      AL+
Sbjct: 119 ADAGRRLPEPALGQM-------ISLLGDYLDYKRASMALMQQPLDARQQVEPQAQLQALQ 171

Query: 235 HLQAEAGVLER 267
              A    L R
Sbjct: 172 SAFARLDELRR 182


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,760,880
Number of Sequences: 219361
Number of extensions: 1396394
Number of successful extensions: 4434
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4431
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)