ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags24k18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FAD3C_SOYBN (P48621) Omega-3 fatty acid desaturase, chloroplast ... 277 3e-76
2FAD3D_ARATH (P48622) Temperature-sensitive omega-3 fatty acid de... 263 4e-72
3FAD3C_SESIN (P48620) Omega-3 fatty acid desaturase, chloroplast ... 266 5e-72
4FAD3C_RICCO (P48619) Omega-3 fatty acid desaturase, chloroplast ... 261 2e-70
5FAD3C_ARATH (P46310) Omega-3 fatty acid desaturase, chloroplast ... 256 9e-69
6FAD3C_BRANA (P48618) Omega-3 fatty acid desaturase, chloroplast ... 255 2e-68
7FAD3E_ARATH (P48623) Omega-3 fatty acid desaturase, endoplasmic ... 242 2e-64
8FAD3E_SOYBN (P48625) Omega-3 fatty acid desaturase, endoplasmic ... 243 3e-64
9FAD3E_BRANA (P48624) Omega-3 fatty acid desaturase, endoplasmic ... 240 6e-64
10FAD3E_TOBAC (P48626) Omega-3 fatty acid desaturase, endoplasmic ... 241 6e-64
11FAD3E_PHAAU (P32291) Omega-3 fatty acid desaturase, endoplasmic ... 240 1e-63
12FAD12_CREAL (O81931) Delta(12) fatty acid dehydrogenase (EC 1.14... 99 5e-21
13FAD6E_ARATH (P46313) Omega-6 fatty acid desaturase, endoplasmic ... 94 2e-19
14FAD6E_BRAJU (Q39287) Omega-6 fatty acid desaturase, endoplasmic ... 93 4e-19
15FAD12_MORIS (P59668) Delta-12 fatty acid desaturase (EC 1.14.19.-) 88 1e-17
16FD6E2_SOYBN (P48631) Omega-6 fatty acid desaturase, endoplasmic ... 87 2e-17
17FAD12_MORAP (Q9Y8H5) Delta-12 fatty acid desaturase (EC 1.14.19.-) 87 2e-17
18FD6E1_SOYBN (P48630) Omega-6 fatty acid desaturase, endoplasmic ... 82 1e-15
19FAD6C_BRANA (P48627) Omega-6 fatty acid desaturase, chloroplast ... 47 2e-05
20FAD6C_SPIOL (P48629) Omega-6 fatty acid desaturase, chloroplast ... 46 5e-05
21FAD6C_SOYBN (P48628) Omega-6 fatty acid desaturase, chloroplast ... 44 2e-04
22FAD6C_ARATH (P46312) Omega-6 fatty acid desaturase, chloroplast ... 44 2e-04
23DESA_SPIPL (Q54794) Fatty acid desaturase (EC 1.14.19.-) (Delta ... 40 0.004
24DESA_SYNY3 (P20388) Fatty acid desaturase (EC 1.14.19.-) (Delta ... 39 0.010
25CYSZ_PSEAE (Q9I595) Protein cysZ homolog 33 0.41
26FA57B_MOUSE (Q7TNV1) Protein FAM57B 33 0.54
27CYSZ_PSEF5 (Q4KI58) Protein cysZ homolog 31 2.1
28SYV_TROWT (Q83G51) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... 29 6.0
29SYV_TROW8 (Q83I17) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... 29 6.0
30XRN1_MOUSE (P97789) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (mXRN1... 29 7.8

>FAD3C_SOYBN (P48621) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 453

 Score =  277 bits (709), Expect(2) = 3e-76
 Identities = 121/155 (78%), Positives = 141/155 (90%)
 Frame = +1

Query: 31  PXRLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTS 210
           P +L+ SLD++T+ LRF+ PFP+LAFP+YLF+RSPGK GSHF+P+SDLF PNE+KDV+TS
Sbjct: 227 PEKLFRSLDTVTRMLRFTAPFPLLAFPVYLFSRSPGKTGSHFDPSSDLFVPNERKDVITS 286

Query: 211 TASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKE 390
           TA W AM+G+L GL FVMGP+++LKLY +PYVIFVMWLD VTYLHHHGHEDK+PWYRGKE
Sbjct: 287 TACWAAMLGLLVGLGFVMGPIQLLKLYGVPYVIFVMWLDLVTYLHHHGHEDKLPWYRGKE 346

Query: 391 WSYLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495
           WSYLRGGLTTLDRDYG IN IHHDIGTHVIHHLFP
Sbjct: 347 WSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFP 381



 Score = 27.3 bits (59), Expect(2) = 3e-76
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 3   EKDESWHPLPQ 35
           E DESWHPLP+
Sbjct: 218 ENDESWHPLPE 228



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>FAD3D_ARATH (P48622) Temperature-sensitive omega-3 fatty acid desaturase,|
           chloroplast precursor (EC 1.14.19.-)
          Length = 435

 Score =  263 bits (673), Expect(2) = 4e-72
 Identities = 117/155 (75%), Positives = 133/155 (85%)
 Frame = +1

Query: 31  PXRLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTS 210
           P  +Y +L+  T+  RF++PFPMLA+P YL+ RSPGK+GSH++P+SDLF P EKKDVLTS
Sbjct: 212 PESIYKNLEKTTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVLTS 271

Query: 211 TASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKE 390
           TA W AM  +L  L FVMGP++MLKLY IPY IFVMWLDFVTYLHHHGHEDK+PWYRGKE
Sbjct: 272 TACWTAMAALLVCLNFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKE 331

Query: 391 WSYLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495
           WSYLRGGLTTLDRDYG IN IHHDIGTHVIHHLFP
Sbjct: 332 WSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFP 366



 Score = 27.3 bits (59), Expect(2) = 4e-72
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 3   EKDESWHPLPQ 35
           E DESWHPLP+
Sbjct: 203 ENDESWHPLPE 213



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>FAD3C_SESIN (P48620) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 447

 Score =  266 bits (680), Expect(2) = 5e-72
 Identities = 115/153 (75%), Positives = 139/153 (90%)
 Frame = +1

Query: 37  RLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTSTA 216
           ++Y +LD+ TKKLRF++PFP+LA+P+YL++RSPGK+GSHF+P+SDLF PNEKKDV+TST 
Sbjct: 225 KIYKNLDTATKKLRFTLPFPLLAYPIYLWSRSPGKQGSHFHPDSDLFVPNEKKDVITSTV 284

Query: 217 SWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWS 396
            W AM+ +L GL+FV+GP+++LKLY IPY+  VMWLD VTYLHHHGHEDK+PWYRGKEWS
Sbjct: 285 CWTAMLALLVGLSFVIGPVQLLKLYGIPYLGNVMWLDLVTYLHHHGHEDKLPWYRGKEWS 344

Query: 397 YLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495
           YLRGGLTTLDRDYG IN IHHDIGTHVIHHLFP
Sbjct: 345 YLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFP 377



 Score = 24.3 bits (51), Expect(2) = 5e-72
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 3   EKDESWHPLPQ 35
           E DESWHPL +
Sbjct: 214 ENDESWHPLSE 224



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>FAD3C_RICCO (P48619) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 460

 Score =  261 bits (666), Expect(2) = 2e-70
 Identities = 115/153 (75%), Positives = 134/153 (87%)
 Frame = +1

Query: 37  RLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTSTA 216
           +++ SLD++TK LRFS+PFPMLA+P YL++RSPGK+GSHF+P+S LF P E+KD++TSTA
Sbjct: 235 KIFKSLDNVTKTLRFSLPFPMLAYPFYLWSRSPGKKGSHFHPDSGLFVPKERKDIITSTA 294

Query: 217 SWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWS 396
            W AM  +L  L F MGP++MLKLY IPY IFVMWLDFVTYLHHHGHEDK+PWYRGK WS
Sbjct: 295 CWTAMAALLVYLNFSMGPVQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWS 354

Query: 397 YLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495
           YLRGGLTTLDRDYG IN IHHDIGTHVIHHLFP
Sbjct: 355 YLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFP 387



 Score = 24.3 bits (51), Expect(2) = 2e-70
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 3   EKDESWHPLPQ 35
           E DESWHPL +
Sbjct: 224 ENDESWHPLSE 234



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>FAD3C_ARATH (P46310) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 446

 Score =  256 bits (654), Expect(2) = 9e-69
 Identities = 114/153 (74%), Positives = 132/153 (86%)
 Frame = +1

Query: 37  RLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTSTA 216
           ++YN+LD  T+  RF++P  MLA+P YL+ARSPGK+GSH++P+SDLF P E+KDVLTSTA
Sbjct: 221 KIYNTLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTA 280

Query: 217 SWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWS 396
            W AM  +L  L F +GP++MLKLY IPY I VMWLDFVTYLHHHGHEDK+PWYRGKEWS
Sbjct: 281 CWTAMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWS 340

Query: 397 YLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495
           YLRGGLTTLDRDYGLIN IHHDIGTHVIHHLFP
Sbjct: 341 YLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFP 373



 Score = 23.5 bits (49), Expect(2) = 9e-69
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 3   EKDESWHPLPQ 35
           E DESWHP+ +
Sbjct: 210 ENDESWHPMSE 220



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>FAD3C_BRANA (P48618) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-) (Fragment)
          Length = 404

 Score =  255 bits (651), Expect(2) = 2e-68
 Identities = 115/153 (75%), Positives = 131/153 (85%)
 Frame = +1

Query: 37  RLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTSTA 216
           ++Y SLD  T+  RF++P  MLA+P YL+ARSPGK+GSH++P+SDLF P E+ DVLTSTA
Sbjct: 179 KIYKSLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTA 238

Query: 217 SWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWS 396
            W AM  +L  L FVMGP++MLKLY IPY I VMWLDFVTYLHHHGHEDK+PWYRGKEWS
Sbjct: 239 CWTAMAVLLVCLNFVMGPMQMLKLYVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWS 298

Query: 397 YLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495
           YLRGGLTTLDRDYGLIN IHHDIGTHVIHHLFP
Sbjct: 299 YLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFP 331



 Score = 23.5 bits (49), Expect(2) = 2e-68
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 3   EKDESWHPLPQ 35
           E DESWHP+ +
Sbjct: 168 ENDESWHPMSE 178



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>FAD3E_ARATH (P48623) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-)
          Length = 386

 Score =  242 bits (618), Expect(2) = 2e-64
 Identities = 106/155 (68%), Positives = 125/155 (80%)
 Frame = +1

Query: 31  PXRLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTS 210
           P R+Y  L   T+ LR+++P PMLA+PLYL  RSPGKEGSHFNP S LF P+E+K + TS
Sbjct: 157 PERVYKKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGKEGSHFNPYSSLFAPSERKLIATS 216

Query: 211 TASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKE 390
           T  W  M   L  L+FV GPL +LK+Y +PY+IFVMWLD VTYLHHHGH++K+PWYRGKE
Sbjct: 217 TTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKE 276

Query: 391 WSYLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495
           WSYLRGGLTT+DRDYG+ N IHHDIGTHVIHHLFP
Sbjct: 277 WSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFP 311



 Score = 23.1 bits (48), Expect(2) = 2e-64
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 3   EKDESWHPLPQ 35
           E DESW PLP+
Sbjct: 148 ENDESWVPLPE 158



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>FAD3E_SOYBN (P48625) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-)
          Length = 380

 Score =  243 bits (619), Expect(2) = 3e-64
 Identities = 105/153 (68%), Positives = 126/153 (82%)
 Frame = +1

Query: 37  RLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTSTA 216
           ++Y +LDSMT+ +RF++PFP+  +P+YLF+RSPGKEGSHFNP S+LF P+E+K +  ST 
Sbjct: 158 KIYKNLDSMTRLIRFTVPFPLFVYPIYLFSRSPGKEGSHFNPYSNLFPPSERKGIAISTL 217

Query: 217 SWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWS 396
            W  M  +L  L+F+  PL +LKLY IPY IFVMWLDFVTYLHHHGH  K+PWYRGKEWS
Sbjct: 218 CWATMFSLLIYLSFITSPLLVLKLYGIPYWIFVMWLDFVTYLHHHGHHQKLPWYRGKEWS 277

Query: 397 YLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495
           YLRGGLTT+DRDYG I  IHHDIGTHVIHHLFP
Sbjct: 278 YLRGGLTTVDRDYGWIYNIHHDIGTHVIHHLFP 310



 Score = 21.9 bits (45), Expect(2) = 3e-64
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 3   EKDESWHPLPQ 35
           EKDESW PL +
Sbjct: 147 EKDESWVPLTE 157



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>FAD3E_BRANA (P48624) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-)
          Length = 383

 Score =  240 bits (613), Expect(2) = 6e-64
 Identities = 102/155 (65%), Positives = 128/155 (82%)
 Frame = +1

Query: 31  PXRLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTS 210
           P +LY +L   T+ LR+++P PMLA+P+YL+ RSPGKEGSHFNP S LF P+E+K + TS
Sbjct: 154 PEKLYKNLPHSTRMLRYTVPLPMLAYPIYLWYRSPGKEGSHFNPYSSLFAPSERKLIATS 213

Query: 211 TASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKE 390
           T  W  M+  L  L+F++ P+ +LK+Y +PY+IFVMWLD VTYLHHHGH++K+PWYRGKE
Sbjct: 214 TTCWSIMLATLVYLSFLVDPVTVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKE 273

Query: 391 WSYLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495
           WSYLRGGLTT+DRDYG+ N IHHDIGTHVIHHLFP
Sbjct: 274 WSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFP 308



 Score = 23.1 bits (48), Expect(2) = 6e-64
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 3   EKDESWHPLPQ 35
           E DESW PLP+
Sbjct: 145 ENDESWVPLPE 155



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>FAD3E_TOBAC (P48626) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-)
          Length = 379

 Score =  241 bits (616), Expect(2) = 6e-64
 Identities = 107/155 (69%), Positives = 124/155 (80%)
 Frame = +1

Query: 31  PXRLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTS 210
           P +LYN +   TK LR+ +PFP+LA+P+YL  RSPGK GSHFNP SDLFQP+E+K V+TS
Sbjct: 153 PEKLYNKVGYSTKFLRYKIPFPLLAYPMYLMKRSPGKSGSHFNPYSDLFQPHERKYVVTS 212

Query: 211 TASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKE 390
           T  W  M  +L  L    G L+M K+Y  PY+IFVMWLDFVTYLHHHG+E K+PWYRGKE
Sbjct: 213 TLCWTVMAALLLYLCTAFGSLQMFKIYGAPYLIFVMWLDFVTYLHHHGYEKKLPWYRGKE 272

Query: 391 WSYLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495
           WSYLRGGLTT+DRDYGL N IHHDIGTHVIHHLFP
Sbjct: 273 WSYLRGGLTTVDRDYGLFNNIHHDIGTHVIHHLFP 307



 Score = 21.9 bits (45), Expect(2) = 6e-64
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 3   EKDESWHPLPQ 35
           E DESW P+P+
Sbjct: 144 ETDESWVPMPE 154



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>FAD3E_PHAAU (P32291) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-) (Indole-3-acetic acid-induced protein ARG1)
          Length = 380

 Score =  240 bits (613), Expect(2) = 1e-63
 Identities = 104/153 (67%), Positives = 127/153 (83%)
 Frame = +1

Query: 37  RLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTSTA 216
           ++Y +LD MT+ LR+S PFP+ A+P YL+ RSPGKEGSHFNP S+LF P E+K V+TST 
Sbjct: 155 KVYKNLDDMTRMLRYSFPFPIFAYPFYLWNRSPGKEGSHFNPYSNLFSPGERKGVVTSTL 214

Query: 217 SWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWS 396
            W  ++ VL  L+  +GP+ MLKLY +PY+IFVMWLDFVTYLHHHG+  K+PWYRG+EWS
Sbjct: 215 CWGIVLSVLLYLSLTIGPIFMLKLYGVPYLIFVMWLDFVTYLHHHGYTHKLPWYRGQEWS 274

Query: 397 YLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495
           YLRGGLTT+DRDYG IN +HHDIGTHVIHHLFP
Sbjct: 275 YLRGGLTTVDRDYGWINNVHHDIGTHVIHHLFP 307



 Score = 21.9 bits (45), Expect(2) = 1e-63
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 3   EKDESWHPLPQ 35
           EKDESW PL +
Sbjct: 144 EKDESWVPLTE 154



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>FAD12_CREAL (O81931) Delta(12) fatty acid dehydrogenase (EC 1.14.99.33)|
           (Crepenynate synthase) (Delta-12 fatty acid acetylenase)
          Length = 375

 Score = 99.4 bits (246), Expect = 5e-21
 Identities = 53/136 (38%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
 Frame = +1

Query: 100 LAFPLYLFARSPGKE----GSHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVMG 267
           L FPLYLF    GK+     +HF+P S +F+  E+  VL S    LA++  +       G
Sbjct: 181 LGFPLYLFTNISGKKYERFANHFDPMSPIFKERERFQVLLSDLGLLAVLYGVKLAVAAKG 240

Query: 268 PLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYGLIN 447
              +  +Y IP +   ++ D +TYLHH      +P Y   EW++LRG L+T+DRD+G +N
Sbjct: 241 AAWVTCIYGIPVLGVFIFFDIITYLHHT--HLSLPHYDSSEWNWLRGALSTIDRDFGFLN 298

Query: 448 KIHHDI-GTHVIHHLF 492
            + HD+  THV+HHLF
Sbjct: 299 SVLHDVTHTHVMHHLF 314



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>FAD6E_ARATH (P46313) Omega-6 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-) (Delta-12 desaturase)
          Length = 383

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
 Frame = +1

Query: 97  MLAFPLYLFARSPGKE----GSHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVM 264
           +L +PLYL     G+       HF PN+ ++   E+  +  S A  LA+   L       
Sbjct: 187 VLGWPLYLAFNVSGRPYDGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLYRYAAAQ 246

Query: 265 GPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYGLI 444
           G   M+ LY +P +I   +L  +TYL H      +P Y   EW +LRG L T+DRDYG++
Sbjct: 247 GMASMICLYGVPLLIVNAFLVLITYLQHT--HPSLPHYDSSEWDWLRGALATVDRDYGIL 304

Query: 445 NKIHHDI-GTHVIHHLF 492
           NK+ H+I  THV HHLF
Sbjct: 305 NKVFHNITDTHVAHHLF 321



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>FAD6E_BRAJU (Q39287) Omega-6 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-) (Delta-12 desaturase)
          Length = 384

 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 53/137 (38%), Positives = 74/137 (54%), Gaps = 6/137 (4%)
 Frame = +1

Query: 100 LAFPLYLFARSPGK---EG--SHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVM 264
           L +PLY      G+   EG   HF+PN+ ++   E+  +  S A  LA+   L       
Sbjct: 188 LGWPLYWAFNVSGRPYPEGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLYRYAAAQ 247

Query: 265 GPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYGLI 444
           G   M+ LY +P +I   +L  +TYL H      +P Y   EW +LRG L T+DRDYG++
Sbjct: 248 GVASMVCLYGVPLLIVNAFLVLITYLQHT--HPSLPHYDSSEWDWLRGALATVDRDYGIL 305

Query: 445 NKIHHDI-GTHVIHHLF 492
           NK+ H+I  THV HHLF
Sbjct: 306 NKVFHNITDTHVAHHLF 322



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>FAD12_MORIS (P59668) Delta-12 fatty acid desaturase (EC 1.14.19.-)|
          Length = 400

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
 Frame = +1

Query: 97  MLAFPLYLFARSPGKE----GSHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVM 264
           +  +P YL   + G++     SHF+  S +F+P    D++ S    LA +G L   +  +
Sbjct: 210 LFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQL 269

Query: 265 GPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYG-- 438
             L + K Y IPY+    WL  +T+L H   + K+P YR   W++ RG L T+DR +G  
Sbjct: 270 SLLTVTKYYIIPYLFVNFWLVLITFLQH--TDPKLPHYREGAWNFQRGALCTVDRSFGKF 327

Query: 439 LINKIHHDIGTHVIHHLF 492
           L +  H  + THV HHLF
Sbjct: 328 LDHMFHGIVHTHVAHHLF 345



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>FD6E2_SOYBN (P48631) Omega-6 fatty acid desaturase, endoplasmic reticulum|
           isozyme 2 (EC 1.14.19.-)
          Length = 383

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
 Frame = +1

Query: 100 LAFPLYLFARSPGKE----GSHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVMG 267
           L +PLYL     G+       H++P   ++   E+  +  S A  LA++  L  L    G
Sbjct: 188 LGWPLYLALNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVVYGLFRLAMAKG 247

Query: 268 PLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYGLIN 447
              ++ +Y +P ++   +L  +T+L H      +P Y   EW +LRG L T+DRDYG++N
Sbjct: 248 LAWVVCVYGVPLLVVNGFLVLITFLQHT--HPALPHYTSSEWDWLRGALATVDRDYGILN 305

Query: 448 KIHHDI-GTHVIHHLF 492
           K+ H+I  THV HHLF
Sbjct: 306 KVFHNITDTHVAHHLF 321



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>FAD12_MORAP (Q9Y8H5) Delta-12 fatty acid desaturase (EC 1.14.19.-)|
          Length = 400

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
 Frame = +1

Query: 97  MLAFPLYLFARSPGKE----GSHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVM 264
           +  +P YL   + G++     SHF+  S +F+P    D++ S    LA +G L   +  +
Sbjct: 210 LFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQL 269

Query: 265 GPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYG-- 438
             L + K Y +PY+    WL  +T+L H   + K+P YR   W++ RG L T+DR +G  
Sbjct: 270 SLLTVTKYYIVPYLFVNFWLVLITFLQH--TDPKLPHYREGAWNFQRGALCTVDRSFGKF 327

Query: 439 LINKIHHDIGTHVIHHLF 492
           L +  H  + THV HHLF
Sbjct: 328 LDHMFHGIVHTHVAHHLF 345



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>FD6E1_SOYBN (P48630) Omega-6 fatty acid desaturase, endoplasmic reticulum|
           isozyme 1 (EC 1.14.19.-)
          Length = 387

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
 Frame = +1

Query: 100 LAFPLYLFARSPGKE----GSHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVMG 267
           + +P+YL     G+      SH++P + ++   E+  +  S  +  ++   L  +  + G
Sbjct: 192 IGWPMYLAFNVSGRPYDSFASHYHPYAPIYSNRERLLIYVSDVALFSVTYSLYRVATLKG 251

Query: 268 PLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYGLIN 447
            + +L +Y +P +I   +L  +TYL H      +P Y   EW +L+G L T+DRDYG++N
Sbjct: 252 LVWLLCVYGVPLLIVNGFLVTITYLQHTHFA--LPHYDSSEWDWLKGALATMDRDYGILN 309

Query: 448 KI-HHDIGTHVIHHLF 492
           K+ HH   THV HHLF
Sbjct: 310 KVFHHITDTHVAHHLF 325



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>FAD6C_BRANA (P48627) Omega-6 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 443

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
 Frame = +1

Query: 151 HFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLT-FVMGPLKMLKLYAIPYVIFVMWLD 327
           HFN     F+P+E   V  S A   A + V   L  + +G L  +K + +P++ +  W+ 
Sbjct: 256 HFNLRK--FRPSEVNRVKISLACVFAFMAVGWPLIIYKVGVLGWVKFWLMPWLGYHFWMS 313

Query: 328 FVTYLHHHGHEDKVPWYRGKEWSYLRGGLT-TLDRDY-GLINKIHHDIGTHVIHHLFP 495
             T +HH      +P+    EW+  +  L  T+  DY   I  + HDI  H+ HH+ P
Sbjct: 314 TFTMVHHTA--PHIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCHDINVHIPHHISP 369



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>FAD6C_SPIOL (P48629) Omega-6 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 447

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
 Frame = +1

Query: 151 HFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDF 330
           HFN   D  Q   K+  ++  A +  M+     + +  G +  +K + +P++ +  W+  
Sbjct: 261 HFNLK-DFRQSEVKRATISLAAVFAFMVIGWPLIIYKTGIVGWIKFWLMPWLGYHFWMST 319

Query: 331 VTYLHHHGHEDKVPWYRGKEWSYLRGGLT-TLDRDY-GLINKIHHDIGTHVIHHLFP 495
            T +HH      +P+   KEW+  +  L+ T+  DY   I  + HDI  H+ HH+ P
Sbjct: 320 FTIVHHTA--PHIPFKSSKEWNAAQAQLSGTVHCDYPRWIEILCHDISVHIPHHISP 374



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>FAD6C_SOYBN (P48628) Omega-6 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 424

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
 Frame = +1

Query: 175 FQPNEKKDVLTSTASWLAMIGVLAGLT-FVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHH 351
           F+P+E   V  S A   A I +   L  +  G +  +K + +P++ +  W+   T +HH 
Sbjct: 261 FRPSEVPRVKISLACVFAFIAIGWPLIIYKTGIMGWIKFWLMPWLGYHFWMSTFTMVHHT 320

Query: 352 GHEDKVPWYRGKEWSYLRGGLT-TLDRDYGL-INKIHHDIGTHVIHHLFP 495
                +P+   +EW+  +  L  T+  DY   I  + HDI  H+ HH+ P
Sbjct: 321 A--PYIPFKYSEEWNRAQAQLNGTVHCDYPKWIEILCHDINVHIPHHISP 368



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>FAD6C_ARATH (P46312) Omega-6 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 448

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
 Frame = +1

Query: 151 HFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGL-TFVMGPLKMLKLYAIPYVIFVMWLD 327
           HFN     F+ +E   V  S A   A + V   L  + +G L  +K + +P++ +  W+ 
Sbjct: 261 HFNLKK--FRASEVNRVKISLACVFAFMAVGWPLIVYKVGILGWVKFWLMPWLGYHFWMS 318

Query: 328 FVTYLHHHGHEDKVPWYRGKEWSYLRGGLT-TLDRDY-GLINKIHHDIGTHVIHHLFP 495
             T +HH      +P+    EW+  +  L  T+  DY   I  + HDI  H+ HH+ P
Sbjct: 319 TFTMVHHTA--PHIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCHDINVHIPHHISP 374



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>DESA_SPIPL (Q54794) Fatty acid desaturase (EC 1.14.19.-) (Delta 12 desaturase)|
          Length = 351

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
 Frame = +1

Query: 175 FQPNEKKDVLTSTASWLAMIGVLA----GLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYL 342
           F+  +++ V  S+   L +IG  A     +   +G    +K + IP+++F  W+   T L
Sbjct: 186 FEGKQRQQVKFSS---LLVIGAAAIAFPTMILTIGVWGFVKFWVIPWLVFHFWMSTFTLL 242

Query: 343 HHHGHEDKVPWYRGKEWSYLRGGLT-TLDRDYGLINK-IHHDIGTHVIHHL 489
           HH   +  +P+   ++W      L+ T+  +Y    + + HDI  H+ HH+
Sbjct: 243 HHTIAD--IPFREPEQWHEAESQLSGTVHCNYSRWGEFLCHDINVHIPHHV 291



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>DESA_SYNY3 (P20388) Fatty acid desaturase (EC 1.14.19.-) (Delta 12 desaturase)|
          Length = 351

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
 Frame = +1

Query: 166 SDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLH 345
           S+  Q +  K  L+    +L        L    G    +K + +P++++  W+   T +H
Sbjct: 185 SNFAQRDRNKVKLSIAVVFLFAAIAFPALIITTGVWGFVKFWLMPWLVYHFWMSTFTIVH 244

Query: 346 HHGHEDKVPWYRGKEWSYLRGGLT-TLDRDY-GLINKIHHDIGTHVIHHL 489
           H   E  + +    +WS     L  T+  DY   +  + HDI  H+ HHL
Sbjct: 245 HTIPE--IRFRPAADWSAAEAQLNGTVHCDYPRWVEVLCHDINVHIPHHL 292



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>CYSZ_PSEAE (Q9I595) Protein cysZ homolog|
          Length = 246

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
 Frame = +1

Query: 238 VLAGLTFVMGPLKMLKLYAIP-YVIFVMWLDFVTYL------HHHGHEDKVPWYRGKEWS 396
           VL  L+FV G    + L A P +++F +W+  V Y+      H  G  + + W R K W+
Sbjct: 147 VLLVLSFVPG----VNLIATPLWILFGIWMMAVQYIDYPADNHKLGWNEMLAWLRSKRWA 202

Query: 397 YLR-GGLTTLDRDYGLINKI 453
            +  GG+T L     L+N +
Sbjct: 203 CMGFGGVTYLALLIPLVNLV 222



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>FA57B_MOUSE (Q7TNV1) Protein FAM57B|
          Length = 225

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +1

Query: 289 YAIPYVIFVMWLDFVTYLHHH-----GHEDKVPWYRGKEWSYLRGGL 414
           +A+PY I+ ++  F+ + H H     G ED  P   G  W+ +RG L
Sbjct: 30  FAVPYFIYDIYAMFLCHWHKHQVKGHGGEDGTPRALGSTWAVVRGYL 76



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>CYSZ_PSEF5 (Q4KI58) Protein cysZ homolog|
          Length = 249

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
 Frame = +1

Query: 256 FVMGPLKMLKLYAIP-YVIFVMWLDFVTYL------HHHGHEDKVPWYRGKEWSYLR-GG 411
           F++  + ++ L A P +++F +W+  + Y+      H    +D + W R K W  L  GG
Sbjct: 151 FILSLIPVVNLIAAPLWLLFGIWMMAIQYIDYPADNHKMSWQDMLAWLRQKRWQSLGFGG 210

Query: 412 LTTLDRDYGLIN 447
           +  L     L+N
Sbjct: 211 IVYLALLIPLVN 222



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>SYV_TROWT (Q83G51) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 856

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 12/69 (17%)
 Frame = -2

Query: 239 TPIIASQDAVDVSTSFFSLGWN----------KSLFGLKCEPSLPGLLANKYK--GNASM 96
           T IIA    +     F+ +GW+          ++ F ++C+PSLP     K     N SM
Sbjct: 64  TDIIARFQRMQGKIVFYPMGWDDNGLPTERRVQNYFSVRCDPSLPYCQNLKLAQINNDSM 123

Query: 95  GNGMLNRNF 69
              +  RNF
Sbjct: 124 ARSISRRNF 132



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>SYV_TROW8 (Q83I17) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 856

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 12/69 (17%)
 Frame = -2

Query: 239 TPIIASQDAVDVSTSFFSLGWN----------KSLFGLKCEPSLPGLLANKYK--GNASM 96
           T IIA    +     F+ +GW+          ++ F ++C+PSLP     K     N SM
Sbjct: 64  TDIIARFQRMQGKIVFYPMGWDDNGLPTERRVQNYFSVRCDPSLPYCQNLKLAQINNDSM 123

Query: 95  GNGMLNRNF 69
              +  RNF
Sbjct: 124 ARSISRRNF 132



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>XRN1_MOUSE (P97789) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (mXRN1)|
            (Strand-exchange protein 1 homolog) (Protein Dhm2)
          Length = 1719

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -2

Query: 266  PITKVRPARTPIIASQDAVDVSTSFFSLGWNKSLFGLKCEPSLPGLLANKYK 111
            P T V    TP       V  S    + G  + +F + CEP+L  L+ N++K
Sbjct: 855  PRTMVFMLGTPYYGCTGEVQDSGDLITEGRIRVVFSIPCEPNLDALIQNQHK 906


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,497,452
Number of Sequences: 219361
Number of extensions: 1849469
Number of successful extensions: 4803
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4782
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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