| Clone Name | bags24k18 |
|---|---|
| Clone Library Name | barley_pub |
>FAD3C_SOYBN (P48621) Omega-3 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 453 Score = 277 bits (709), Expect(2) = 3e-76 Identities = 121/155 (78%), Positives = 141/155 (90%) Frame = +1 Query: 31 PXRLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTS 210 P +L+ SLD++T+ LRF+ PFP+LAFP+YLF+RSPGK GSHF+P+SDLF PNE+KDV+TS Sbjct: 227 PEKLFRSLDTVTRMLRFTAPFPLLAFPVYLFSRSPGKTGSHFDPSSDLFVPNERKDVITS 286 Query: 211 TASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKE 390 TA W AM+G+L GL FVMGP+++LKLY +PYVIFVMWLD VTYLHHHGHEDK+PWYRGKE Sbjct: 287 TACWAAMLGLLVGLGFVMGPIQLLKLYGVPYVIFVMWLDLVTYLHHHGHEDKLPWYRGKE 346 Query: 391 WSYLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495 WSYLRGGLTTLDRDYG IN IHHDIGTHVIHHLFP Sbjct: 347 WSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFP 381 Score = 27.3 bits (59), Expect(2) = 3e-76 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +3 Query: 3 EKDESWHPLPQ 35 E DESWHPLP+ Sbjct: 218 ENDESWHPLPE 228
>FAD3D_ARATH (P48622) Temperature-sensitive omega-3 fatty acid desaturase,| chloroplast precursor (EC 1.14.19.-) Length = 435 Score = 263 bits (673), Expect(2) = 4e-72 Identities = 117/155 (75%), Positives = 133/155 (85%) Frame = +1 Query: 31 PXRLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTS 210 P +Y +L+ T+ RF++PFPMLA+P YL+ RSPGK+GSH++P+SDLF P EKKDVLTS Sbjct: 212 PESIYKNLEKTTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVLTS 271 Query: 211 TASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKE 390 TA W AM +L L FVMGP++MLKLY IPY IFVMWLDFVTYLHHHGHEDK+PWYRGKE Sbjct: 272 TACWTAMAALLVCLNFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKE 331 Query: 391 WSYLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495 WSYLRGGLTTLDRDYG IN IHHDIGTHVIHHLFP Sbjct: 332 WSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFP 366 Score = 27.3 bits (59), Expect(2) = 4e-72 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +3 Query: 3 EKDESWHPLPQ 35 E DESWHPLP+ Sbjct: 203 ENDESWHPLPE 213
>FAD3C_SESIN (P48620) Omega-3 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 447 Score = 266 bits (680), Expect(2) = 5e-72 Identities = 115/153 (75%), Positives = 139/153 (90%) Frame = +1 Query: 37 RLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTSTA 216 ++Y +LD+ TKKLRF++PFP+LA+P+YL++RSPGK+GSHF+P+SDLF PNEKKDV+TST Sbjct: 225 KIYKNLDTATKKLRFTLPFPLLAYPIYLWSRSPGKQGSHFHPDSDLFVPNEKKDVITSTV 284 Query: 217 SWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWS 396 W AM+ +L GL+FV+GP+++LKLY IPY+ VMWLD VTYLHHHGHEDK+PWYRGKEWS Sbjct: 285 CWTAMLALLVGLSFVIGPVQLLKLYGIPYLGNVMWLDLVTYLHHHGHEDKLPWYRGKEWS 344 Query: 397 YLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495 YLRGGLTTLDRDYG IN IHHDIGTHVIHHLFP Sbjct: 345 YLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFP 377 Score = 24.3 bits (51), Expect(2) = 5e-72 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +3 Query: 3 EKDESWHPLPQ 35 E DESWHPL + Sbjct: 214 ENDESWHPLSE 224
>FAD3C_RICCO (P48619) Omega-3 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 460 Score = 261 bits (666), Expect(2) = 2e-70 Identities = 115/153 (75%), Positives = 134/153 (87%) Frame = +1 Query: 37 RLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTSTA 216 +++ SLD++TK LRFS+PFPMLA+P YL++RSPGK+GSHF+P+S LF P E+KD++TSTA Sbjct: 235 KIFKSLDNVTKTLRFSLPFPMLAYPFYLWSRSPGKKGSHFHPDSGLFVPKERKDIITSTA 294 Query: 217 SWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWS 396 W AM +L L F MGP++MLKLY IPY IFVMWLDFVTYLHHHGHEDK+PWYRGK WS Sbjct: 295 CWTAMAALLVYLNFSMGPVQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWS 354 Query: 397 YLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495 YLRGGLTTLDRDYG IN IHHDIGTHVIHHLFP Sbjct: 355 YLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFP 387 Score = 24.3 bits (51), Expect(2) = 2e-70 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +3 Query: 3 EKDESWHPLPQ 35 E DESWHPL + Sbjct: 224 ENDESWHPLSE 234
>FAD3C_ARATH (P46310) Omega-3 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 446 Score = 256 bits (654), Expect(2) = 9e-69 Identities = 114/153 (74%), Positives = 132/153 (86%) Frame = +1 Query: 37 RLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTSTA 216 ++YN+LD T+ RF++P MLA+P YL+ARSPGK+GSH++P+SDLF P E+KDVLTSTA Sbjct: 221 KIYNTLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTA 280 Query: 217 SWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWS 396 W AM +L L F +GP++MLKLY IPY I VMWLDFVTYLHHHGHEDK+PWYRGKEWS Sbjct: 281 CWTAMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWS 340 Query: 397 YLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495 YLRGGLTTLDRDYGLIN IHHDIGTHVIHHLFP Sbjct: 341 YLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFP 373 Score = 23.5 bits (49), Expect(2) = 9e-69 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = +3 Query: 3 EKDESWHPLPQ 35 E DESWHP+ + Sbjct: 210 ENDESWHPMSE 220
>FAD3C_BRANA (P48618) Omega-3 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) (Fragment) Length = 404 Score = 255 bits (651), Expect(2) = 2e-68 Identities = 115/153 (75%), Positives = 131/153 (85%) Frame = +1 Query: 37 RLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTSTA 216 ++Y SLD T+ RF++P MLA+P YL+ARSPGK+GSH++P+SDLF P E+ DVLTSTA Sbjct: 179 KIYKSLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTA 238 Query: 217 SWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWS 396 W AM +L L FVMGP++MLKLY IPY I VMWLDFVTYLHHHGHEDK+PWYRGKEWS Sbjct: 239 CWTAMAVLLVCLNFVMGPMQMLKLYVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWS 298 Query: 397 YLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495 YLRGGLTTLDRDYGLIN IHHDIGTHVIHHLFP Sbjct: 299 YLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFP 331 Score = 23.5 bits (49), Expect(2) = 2e-68 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = +3 Query: 3 EKDESWHPLPQ 35 E DESWHP+ + Sbjct: 168 ENDESWHPMSE 178
>FAD3E_ARATH (P48623) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) Length = 386 Score = 242 bits (618), Expect(2) = 2e-64 Identities = 106/155 (68%), Positives = 125/155 (80%) Frame = +1 Query: 31 PXRLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTS 210 P R+Y L T+ LR+++P PMLA+PLYL RSPGKEGSHFNP S LF P+E+K + TS Sbjct: 157 PERVYKKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGKEGSHFNPYSSLFAPSERKLIATS 216 Query: 211 TASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKE 390 T W M L L+FV GPL +LK+Y +PY+IFVMWLD VTYLHHHGH++K+PWYRGKE Sbjct: 217 TTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKE 276 Query: 391 WSYLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495 WSYLRGGLTT+DRDYG+ N IHHDIGTHVIHHLFP Sbjct: 277 WSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFP 311 Score = 23.1 bits (48), Expect(2) = 2e-64 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +3 Query: 3 EKDESWHPLPQ 35 E DESW PLP+ Sbjct: 148 ENDESWVPLPE 158
>FAD3E_SOYBN (P48625) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) Length = 380 Score = 243 bits (619), Expect(2) = 3e-64 Identities = 105/153 (68%), Positives = 126/153 (82%) Frame = +1 Query: 37 RLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTSTA 216 ++Y +LDSMT+ +RF++PFP+ +P+YLF+RSPGKEGSHFNP S+LF P+E+K + ST Sbjct: 158 KIYKNLDSMTRLIRFTVPFPLFVYPIYLFSRSPGKEGSHFNPYSNLFPPSERKGIAISTL 217 Query: 217 SWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWS 396 W M +L L+F+ PL +LKLY IPY IFVMWLDFVTYLHHHGH K+PWYRGKEWS Sbjct: 218 CWATMFSLLIYLSFITSPLLVLKLYGIPYWIFVMWLDFVTYLHHHGHHQKLPWYRGKEWS 277 Query: 397 YLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495 YLRGGLTT+DRDYG I IHHDIGTHVIHHLFP Sbjct: 278 YLRGGLTTVDRDYGWIYNIHHDIGTHVIHHLFP 310 Score = 21.9 bits (45), Expect(2) = 3e-64 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +3 Query: 3 EKDESWHPLPQ 35 EKDESW PL + Sbjct: 147 EKDESWVPLTE 157
>FAD3E_BRANA (P48624) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) Length = 383 Score = 240 bits (613), Expect(2) = 6e-64 Identities = 102/155 (65%), Positives = 128/155 (82%) Frame = +1 Query: 31 PXRLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTS 210 P +LY +L T+ LR+++P PMLA+P+YL+ RSPGKEGSHFNP S LF P+E+K + TS Sbjct: 154 PEKLYKNLPHSTRMLRYTVPLPMLAYPIYLWYRSPGKEGSHFNPYSSLFAPSERKLIATS 213 Query: 211 TASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKE 390 T W M+ L L+F++ P+ +LK+Y +PY+IFVMWLD VTYLHHHGH++K+PWYRGKE Sbjct: 214 TTCWSIMLATLVYLSFLVDPVTVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKE 273 Query: 391 WSYLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495 WSYLRGGLTT+DRDYG+ N IHHDIGTHVIHHLFP Sbjct: 274 WSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFP 308 Score = 23.1 bits (48), Expect(2) = 6e-64 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +3 Query: 3 EKDESWHPLPQ 35 E DESW PLP+ Sbjct: 145 ENDESWVPLPE 155
>FAD3E_TOBAC (P48626) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) Length = 379 Score = 241 bits (616), Expect(2) = 6e-64 Identities = 107/155 (69%), Positives = 124/155 (80%) Frame = +1 Query: 31 PXRLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTS 210 P +LYN + TK LR+ +PFP+LA+P+YL RSPGK GSHFNP SDLFQP+E+K V+TS Sbjct: 153 PEKLYNKVGYSTKFLRYKIPFPLLAYPMYLMKRSPGKSGSHFNPYSDLFQPHERKYVVTS 212 Query: 211 TASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKE 390 T W M +L L G L+M K+Y PY+IFVMWLDFVTYLHHHG+E K+PWYRGKE Sbjct: 213 TLCWTVMAALLLYLCTAFGSLQMFKIYGAPYLIFVMWLDFVTYLHHHGYEKKLPWYRGKE 272 Query: 391 WSYLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495 WSYLRGGLTT+DRDYGL N IHHDIGTHVIHHLFP Sbjct: 273 WSYLRGGLTTVDRDYGLFNNIHHDIGTHVIHHLFP 307 Score = 21.9 bits (45), Expect(2) = 6e-64 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = +3 Query: 3 EKDESWHPLPQ 35 E DESW P+P+ Sbjct: 144 ETDESWVPMPE 154
>FAD3E_PHAAU (P32291) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) (Indole-3-acetic acid-induced protein ARG1) Length = 380 Score = 240 bits (613), Expect(2) = 1e-63 Identities = 104/153 (67%), Positives = 127/153 (83%) Frame = +1 Query: 37 RLYNSLDSMTKKLRFSMPFPMLAFPLYLFARSPGKEGSHFNPNSDLFQPNEKKDVLTSTA 216 ++Y +LD MT+ LR+S PFP+ A+P YL+ RSPGKEGSHFNP S+LF P E+K V+TST Sbjct: 155 KVYKNLDDMTRMLRYSFPFPIFAYPFYLWNRSPGKEGSHFNPYSNLFSPGERKGVVTSTL 214 Query: 217 SWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWS 396 W ++ VL L+ +GP+ MLKLY +PY+IFVMWLDFVTYLHHHG+ K+PWYRG+EWS Sbjct: 215 CWGIVLSVLLYLSLTIGPIFMLKLYGVPYLIFVMWLDFVTYLHHHGYTHKLPWYRGQEWS 274 Query: 397 YLRGGLTTLDRDYGLINKIHHDIGTHVIHHLFP 495 YLRGGLTT+DRDYG IN +HHDIGTHVIHHLFP Sbjct: 275 YLRGGLTTVDRDYGWINNVHHDIGTHVIHHLFP 307 Score = 21.9 bits (45), Expect(2) = 1e-63 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +3 Query: 3 EKDESWHPLPQ 35 EKDESW PL + Sbjct: 144 EKDESWVPLTE 154
>FAD12_CREAL (O81931) Delta(12) fatty acid dehydrogenase (EC 1.14.99.33)| (Crepenynate synthase) (Delta-12 fatty acid acetylenase) Length = 375 Score = 99.4 bits (246), Expect = 5e-21 Identities = 53/136 (38%), Positives = 78/136 (57%), Gaps = 5/136 (3%) Frame = +1 Query: 100 LAFPLYLFARSPGKE----GSHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVMG 267 L FPLYLF GK+ +HF+P S +F+ E+ VL S LA++ + G Sbjct: 181 LGFPLYLFTNISGKKYERFANHFDPMSPIFKERERFQVLLSDLGLLAVLYGVKLAVAAKG 240 Query: 268 PLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYGLIN 447 + +Y IP + ++ D +TYLHH +P Y EW++LRG L+T+DRD+G +N Sbjct: 241 AAWVTCIYGIPVLGVFIFFDIITYLHHT--HLSLPHYDSSEWNWLRGALSTIDRDFGFLN 298 Query: 448 KIHHDI-GTHVIHHLF 492 + HD+ THV+HHLF Sbjct: 299 SVLHDVTHTHVMHHLF 314
>FAD6E_ARATH (P46313) Omega-6 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) (Delta-12 desaturase) Length = 383 Score = 94.0 bits (232), Expect = 2e-19 Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 5/137 (3%) Frame = +1 Query: 97 MLAFPLYLFARSPGKE----GSHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVM 264 +L +PLYL G+ HF PN+ ++ E+ + S A LA+ L Sbjct: 187 VLGWPLYLAFNVSGRPYDGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLYRYAAAQ 246 Query: 265 GPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYGLI 444 G M+ LY +P +I +L +TYL H +P Y EW +LRG L T+DRDYG++ Sbjct: 247 GMASMICLYGVPLLIVNAFLVLITYLQHT--HPSLPHYDSSEWDWLRGALATVDRDYGIL 304 Query: 445 NKIHHDI-GTHVIHHLF 492 NK+ H+I THV HHLF Sbjct: 305 NKVFHNITDTHVAHHLF 321
>FAD6E_BRAJU (Q39287) Omega-6 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) (Delta-12 desaturase) Length = 384 Score = 92.8 bits (229), Expect = 4e-19 Identities = 53/137 (38%), Positives = 74/137 (54%), Gaps = 6/137 (4%) Frame = +1 Query: 100 LAFPLYLFARSPGK---EG--SHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVM 264 L +PLY G+ EG HF+PN+ ++ E+ + S A LA+ L Sbjct: 188 LGWPLYWAFNVSGRPYPEGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLYRYAAAQ 247 Query: 265 GPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYGLI 444 G M+ LY +P +I +L +TYL H +P Y EW +LRG L T+DRDYG++ Sbjct: 248 GVASMVCLYGVPLLIVNAFLVLITYLQHT--HPSLPHYDSSEWDWLRGALATVDRDYGIL 305 Query: 445 NKIHHDI-GTHVIHHLF 492 NK+ H+I THV HHLF Sbjct: 306 NKVFHNITDTHVAHHLF 322
>FAD12_MORIS (P59668) Delta-12 fatty acid desaturase (EC 1.14.19.-)| Length = 400 Score = 87.8 bits (216), Expect = 1e-17 Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 6/138 (4%) Frame = +1 Query: 97 MLAFPLYLFARSPGKE----GSHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVM 264 + +P YL + G++ SHF+ S +F+P D++ S LA +G L + + Sbjct: 210 LFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQL 269 Query: 265 GPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYG-- 438 L + K Y IPY+ WL +T+L H + K+P YR W++ RG L T+DR +G Sbjct: 270 SLLTVTKYYIIPYLFVNFWLVLITFLQH--TDPKLPHYREGAWNFQRGALCTVDRSFGKF 327 Query: 439 LINKIHHDIGTHVIHHLF 492 L + H + THV HHLF Sbjct: 328 LDHMFHGIVHTHVAHHLF 345
>FD6E2_SOYBN (P48631) Omega-6 fatty acid desaturase, endoplasmic reticulum| isozyme 2 (EC 1.14.19.-) Length = 383 Score = 87.4 bits (215), Expect = 2e-17 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 5/136 (3%) Frame = +1 Query: 100 LAFPLYLFARSPGKE----GSHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVMG 267 L +PLYL G+ H++P ++ E+ + S A LA++ L L G Sbjct: 188 LGWPLYLALNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVVYGLFRLAMAKG 247 Query: 268 PLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYGLIN 447 ++ +Y +P ++ +L +T+L H +P Y EW +LRG L T+DRDYG++N Sbjct: 248 LAWVVCVYGVPLLVVNGFLVLITFLQHT--HPALPHYTSSEWDWLRGALATVDRDYGILN 305 Query: 448 KIHHDI-GTHVIHHLF 492 K+ H+I THV HHLF Sbjct: 306 KVFHNITDTHVAHHLF 321
>FAD12_MORAP (Q9Y8H5) Delta-12 fatty acid desaturase (EC 1.14.19.-)| Length = 400 Score = 87.4 bits (215), Expect = 2e-17 Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 6/138 (4%) Frame = +1 Query: 97 MLAFPLYLFARSPGKE----GSHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVM 264 + +P YL + G++ SHF+ S +F+P D++ S LA +G L + + Sbjct: 210 LFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQL 269 Query: 265 GPLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYG-- 438 L + K Y +PY+ WL +T+L H + K+P YR W++ RG L T+DR +G Sbjct: 270 SLLTVTKYYIVPYLFVNFWLVLITFLQH--TDPKLPHYREGAWNFQRGALCTVDRSFGKF 327 Query: 439 LINKIHHDIGTHVIHHLF 492 L + H + THV HHLF Sbjct: 328 LDHMFHGIVHTHVAHHLF 345
>FD6E1_SOYBN (P48630) Omega-6 fatty acid desaturase, endoplasmic reticulum| isozyme 1 (EC 1.14.19.-) Length = 387 Score = 81.6 bits (200), Expect = 1e-15 Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 5/136 (3%) Frame = +1 Query: 100 LAFPLYLFARSPGKE----GSHFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVMG 267 + +P+YL G+ SH++P + ++ E+ + S + ++ L + + G Sbjct: 192 IGWPMYLAFNVSGRPYDSFASHYHPYAPIYSNRERLLIYVSDVALFSVTYSLYRVATLKG 251 Query: 268 PLKMLKLYAIPYVIFVMWLDFVTYLHHHGHEDKVPWYRGKEWSYLRGGLTTLDRDYGLIN 447 + +L +Y +P +I +L +TYL H +P Y EW +L+G L T+DRDYG++N Sbjct: 252 LVWLLCVYGVPLLIVNGFLVTITYLQHTHFA--LPHYDSSEWDWLKGALATMDRDYGILN 309 Query: 448 KI-HHDIGTHVIHHLF 492 K+ HH THV HHLF Sbjct: 310 KVFHHITDTHVAHHLF 325
>FAD6C_BRANA (P48627) Omega-6 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 443 Score = 47.4 bits (111), Expect = 2e-05 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 3/118 (2%) Frame = +1 Query: 151 HFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLT-FVMGPLKMLKLYAIPYVIFVMWLD 327 HFN F+P+E V S A A + V L + +G L +K + +P++ + W+ Sbjct: 256 HFNLRK--FRPSEVNRVKISLACVFAFMAVGWPLIIYKVGVLGWVKFWLMPWLGYHFWMS 313 Query: 328 FVTYLHHHGHEDKVPWYRGKEWSYLRGGLT-TLDRDY-GLINKIHHDIGTHVIHHLFP 495 T +HH +P+ EW+ + L T+ DY I + HDI H+ HH+ P Sbjct: 314 TFTMVHHTA--PHIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCHDINVHIPHHISP 369
>FAD6C_SPIOL (P48629) Omega-6 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 447 Score = 46.2 bits (108), Expect = 5e-05 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 2/117 (1%) Frame = +1 Query: 151 HFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDF 330 HFN D Q K+ ++ A + M+ + + G + +K + +P++ + W+ Sbjct: 261 HFNLK-DFRQSEVKRATISLAAVFAFMVIGWPLIIYKTGIVGWIKFWLMPWLGYHFWMST 319 Query: 331 VTYLHHHGHEDKVPWYRGKEWSYLRGGLT-TLDRDY-GLINKIHHDIGTHVIHHLFP 495 T +HH +P+ KEW+ + L+ T+ DY I + HDI H+ HH+ P Sbjct: 320 FTIVHHTA--PHIPFKSSKEWNAAQAQLSGTVHCDYPRWIEILCHDISVHIPHHISP 374
>FAD6C_SOYBN (P48628) Omega-6 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 424 Score = 44.3 bits (103), Expect = 2e-04 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 3/110 (2%) Frame = +1 Query: 175 FQPNEKKDVLTSTASWLAMIGVLAGLT-FVMGPLKMLKLYAIPYVIFVMWLDFVTYLHHH 351 F+P+E V S A A I + L + G + +K + +P++ + W+ T +HH Sbjct: 261 FRPSEVPRVKISLACVFAFIAIGWPLIIYKTGIMGWIKFWLMPWLGYHFWMSTFTMVHHT 320 Query: 352 GHEDKVPWYRGKEWSYLRGGLT-TLDRDYGL-INKIHHDIGTHVIHHLFP 495 +P+ +EW+ + L T+ DY I + HDI H+ HH+ P Sbjct: 321 A--PYIPFKYSEEWNRAQAQLNGTVHCDYPKWIEILCHDINVHIPHHISP 368
>FAD6C_ARATH (P46312) Omega-6 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 448 Score = 44.3 bits (103), Expect = 2e-04 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 3/118 (2%) Frame = +1 Query: 151 HFNPNSDLFQPNEKKDVLTSTASWLAMIGVLAGL-TFVMGPLKMLKLYAIPYVIFVMWLD 327 HFN F+ +E V S A A + V L + +G L +K + +P++ + W+ Sbjct: 261 HFNLKK--FRASEVNRVKISLACVFAFMAVGWPLIVYKVGILGWVKFWLMPWLGYHFWMS 318 Query: 328 FVTYLHHHGHEDKVPWYRGKEWSYLRGGLT-TLDRDY-GLINKIHHDIGTHVIHHLFP 495 T +HH +P+ EW+ + L T+ DY I + HDI H+ HH+ P Sbjct: 319 TFTMVHHTA--PHIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCHDINVHIPHHISP 374
>DESA_SPIPL (Q54794) Fatty acid desaturase (EC 1.14.19.-) (Delta 12 desaturase)| Length = 351 Score = 39.7 bits (91), Expect = 0.004 Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 6/111 (5%) Frame = +1 Query: 175 FQPNEKKDVLTSTASWLAMIGVLA----GLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYL 342 F+ +++ V S+ L +IG A + +G +K + IP+++F W+ T L Sbjct: 186 FEGKQRQQVKFSS---LLVIGAAAIAFPTMILTIGVWGFVKFWVIPWLVFHFWMSTFTLL 242 Query: 343 HHHGHEDKVPWYRGKEWSYLRGGLT-TLDRDYGLINK-IHHDIGTHVIHHL 489 HH + +P+ ++W L+ T+ +Y + + HDI H+ HH+ Sbjct: 243 HHTIAD--IPFREPEQWHEAESQLSGTVHCNYSRWGEFLCHDINVHIPHHV 291
>DESA_SYNY3 (P20388) Fatty acid desaturase (EC 1.14.19.-) (Delta 12 desaturase)| Length = 351 Score = 38.5 bits (88), Expect = 0.010 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 2/110 (1%) Frame = +1 Query: 166 SDLFQPNEKKDVLTSTASWLAMIGVLAGLTFVMGPLKMLKLYAIPYVIFVMWLDFVTYLH 345 S+ Q + K L+ +L L G +K + +P++++ W+ T +H Sbjct: 185 SNFAQRDRNKVKLSIAVVFLFAAIAFPALIITTGVWGFVKFWLMPWLVYHFWMSTFTIVH 244 Query: 346 HHGHEDKVPWYRGKEWSYLRGGLT-TLDRDY-GLINKIHHDIGTHVIHHL 489 H E + + +WS L T+ DY + + HDI H+ HHL Sbjct: 245 HTIPE--IRFRPAADWSAAEAQLNGTVHCDYPRWVEVLCHDINVHIPHHL 292
>CYSZ_PSEAE (Q9I595) Protein cysZ homolog| Length = 246 Score = 33.1 bits (74), Expect = 0.41 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 8/80 (10%) Frame = +1 Query: 238 VLAGLTFVMGPLKMLKLYAIP-YVIFVMWLDFVTYL------HHHGHEDKVPWYRGKEWS 396 VL L+FV G + L A P +++F +W+ V Y+ H G + + W R K W+ Sbjct: 147 VLLVLSFVPG----VNLIATPLWILFGIWMMAVQYIDYPADNHKLGWNEMLAWLRSKRWA 202 Query: 397 YLR-GGLTTLDRDYGLINKI 453 + GG+T L L+N + Sbjct: 203 CMGFGGVTYLALLIPLVNLV 222
>FA57B_MOUSE (Q7TNV1) Protein FAM57B| Length = 225 Score = 32.7 bits (73), Expect = 0.54 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%) Frame = +1 Query: 289 YAIPYVIFVMWLDFVTYLHHH-----GHEDKVPWYRGKEWSYLRGGL 414 +A+PY I+ ++ F+ + H H G ED P G W+ +RG L Sbjct: 30 FAVPYFIYDIYAMFLCHWHKHQVKGHGGEDGTPRALGSTWAVVRGYL 76
>CYSZ_PSEF5 (Q4KI58) Protein cysZ homolog| Length = 249 Score = 30.8 bits (68), Expect = 2.1 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 8/72 (11%) Frame = +1 Query: 256 FVMGPLKMLKLYAIP-YVIFVMWLDFVTYL------HHHGHEDKVPWYRGKEWSYLR-GG 411 F++ + ++ L A P +++F +W+ + Y+ H +D + W R K W L GG Sbjct: 151 FILSLIPVVNLIAAPLWLLFGIWMMAIQYIDYPADNHKMSWQDMLAWLRQKRWQSLGFGG 210 Query: 412 LTTLDRDYGLIN 447 + L L+N Sbjct: 211 IVYLALLIPLVN 222
>SYV_TROWT (Q83G51) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 856 Score = 29.3 bits (64), Expect = 6.0 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 12/69 (17%) Frame = -2 Query: 239 TPIIASQDAVDVSTSFFSLGWN----------KSLFGLKCEPSLPGLLANKYK--GNASM 96 T IIA + F+ +GW+ ++ F ++C+PSLP K N SM Sbjct: 64 TDIIARFQRMQGKIVFYPMGWDDNGLPTERRVQNYFSVRCDPSLPYCQNLKLAQINNDSM 123 Query: 95 GNGMLNRNF 69 + RNF Sbjct: 124 ARSISRRNF 132
>SYV_TROW8 (Q83I17) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 856 Score = 29.3 bits (64), Expect = 6.0 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 12/69 (17%) Frame = -2 Query: 239 TPIIASQDAVDVSTSFFSLGWN----------KSLFGLKCEPSLPGLLANKYK--GNASM 96 T IIA + F+ +GW+ ++ F ++C+PSLP K N SM Sbjct: 64 TDIIARFQRMQGKIVFYPMGWDDNGLPTERRVQNYFSVRCDPSLPYCQNLKLAQINNDSM 123 Query: 95 GNGMLNRNF 69 + RNF Sbjct: 124 ARSISRRNF 132
>XRN1_MOUSE (P97789) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (mXRN1)| (Strand-exchange protein 1 homolog) (Protein Dhm2) Length = 1719 Score = 28.9 bits (63), Expect = 7.8 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -2 Query: 266 PITKVRPARTPIIASQDAVDVSTSFFSLGWNKSLFGLKCEPSLPGLLANKYK 111 P T V TP V S + G + +F + CEP+L L+ N++K Sbjct: 855 PRTMVFMLGTPYYGCTGEVQDSGDLITEGRIRVVFSIPCEPNLDALIQNQHK 906 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,497,452 Number of Sequences: 219361 Number of extensions: 1849469 Number of successful extensions: 4803 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4575 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4782 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)