Clone Information

BLAST Search Result

Clone Name	bags24j24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL3_ORYSA (P35684) 60S ribosomal protein L3	262	6e-70
2	RL3B_ARATH (P22738) 60S ribosomal protein L3	242	5e-64
3	RL3A_ARATH (P17094) 60S ribosomal protein L3	237	2e-62
4	RL3_DROME (O16797) 60S ribosomal protein L3	192	8e-49
5	RL3_TOXCA (P49149) 60S ribosomal protein L3	185	7e-47
6	RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)	181	1e-45
7	RL3_CAEEL (P50880) 60S ribosomal protein L3	181	2e-45
8	RL3_RAT (P21531) 60S ribosomal protein L3 (L4)	179	4e-45
9	RL3_BOVIN (P39872) 60S ribosomal protein L3	179	4e-45
10	RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-bindi...	179	5e-45
11	RL3_ASHGO (Q759R7) 60S ribosomal protein L3	178	9e-45
12	RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3	177	1e-44
13	RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like	176	3e-44
14	RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3	174	2e-43
15	RL3_DICDI (P34113) 60S ribosomal protein L3	173	4e-43
16	RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like	173	4e-43
17	RL3_KLULA (Q6CJR7) 60S ribosomal protein L3	171	1e-42
18	RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Mainten...	171	2e-42
19	RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)	169	5e-42
20	RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3	169	5e-42
21	RL3B_SCHPO (P36584) 60S ribosomal protein L3-B	167	2e-41
22	RL3A_SCHPO (P40372) 60S ribosomal protein L3-A	167	2e-41
23	RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3	166	6e-41
24	RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3	164	1e-40
25	RL3_NEUCR (P59671) 60S ribosomal protein L3	162	6e-40
26	RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P	100	3e-21
27	RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P	100	4e-21
28	RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P	98	2e-20
29	RL3_PYRHO (O59418) 50S ribosomal protein L3P	97	3e-20
30	RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)	90	4e-18
31	RL3_METJA (P54014) 50S ribosomal protein L3P	86	8e-17
32	RL3_METAC (Q8TRU7) 50S ribosomal protein L3P	86	1e-16
33	RL3_ARCFU (O28354) 50S ribosomal protein L3P	84	2e-16
34	RL3_METTH (O26110) 50S ribosomal protein L3P	84	3e-16
35	RL3_METMA (Q8PV50) 50S ribosomal protein L3P	84	3e-16
36	RL3_METVA (Q9UWG2) 50S ribosomal protein L3P	82	8e-16
37	RL3_METKA (Q8TY90) 50S ribosomal protein L3P	81	2e-15
38	RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P	72	1e-12
39	RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P	70	3e-12
40	RL3_THEVO (Q97BX7) 50S ribosomal protein L3P	68	2e-11
41	RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)	68	2e-11
42	RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P	66	8e-11
43	RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P	57	3e-08
44	RL3_SULTO (Q975I1) 50S ribosomal protein L3P	57	4e-08
45	RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P	54	3e-07
46	RL3_SULAC (Q4JB40) 50S ribosomal protein L3P	54	4e-07
47	RL3_NANEQ (P60458) 50S ribosomal protein L3P	53	6e-07
48	RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase...	39	0.008
49	RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase...	39	0.008
50	RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase...	39	0.011
51	CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (...	31	2.2
52	IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)	31	2.9
53	IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)	31	2.9
54	ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor...	30	3.8
55	HEM3_DESVH (Q72AV0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG...	30	3.8
56	RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase...	30	3.8
57	PNKP_HUMAN (Q96T60) Bifunctional polynucleotide phosphatase/kina...	30	5.0
58	BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3...	30	5.0
59	RUVB_ENTFA (Q839T5) Holliday junction ATP-dependent DNA helicase...	30	6.5
60	LPH_RAT (Q02401) Lactase-phlorizin hydrolase precursor (Lactase-...	29	8.5
61	LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A ...	29	8.5
62	MGAT2_HUMAN (Q10469) Alpha-1,6-mannosyl-glycoprotein 2-beta-N-ac...	29	8.5

>RL3_ORYSA (P35684) 60S ribosomal protein L3|
          Length = 388

 Score =  262 bits (669), Expect = 6e-70
 Identities = 125/133 (93%), Positives = 128/133 (96%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK GQE+H A TEFDRTEKDITPMGGF
Sbjct: 255 GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGF 314

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 372
           PHYGVVK DYLMIKGCCVGPKKRVVTL QSLLKQTSRLALEEIKLKF+DTSSKFGHGRFQ
Sbjct: 315 PHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQ 374

Query: 373 TTDEKQRFYGKLK 411
           TTDEKQRF+GKLK
Sbjct: 375 TTDEKQRFFGKLK 387

to top

>RL3B_ARATH (P22738) 60S ribosomal protein L3|
          Length = 389

 Score =  242 bits (618), Expect = 5e-64
 Identities = 111/131 (84%), Positives = 122/131 (93%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GAWHPARVSYTVARAGQNGYHHRTEMNKKVY++GKVGQETH A TE+DRTEKDITPMGGF
Sbjct: 255 GAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGGF 314

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 372
           PHYG+VK DYLMIKGCCVGPKKRVVTL Q+LLKQTSRLA+EEIKLKF+D +S  GHGRFQ
Sbjct: 315 PHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLKFIDAASNGGHGRFQ 374

Query: 373 TTDEKQRFYGK 405
           T+ EK +FYG+
Sbjct: 375 TSQEKAKFYGR 385

to top

>RL3A_ARATH (P17094) 60S ribosomal protein L3|
          Length = 388

 Score =  237 bits (604), Expect = 2e-62
 Identities = 109/132 (82%), Positives = 121/132 (91%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GAWHPARVSYTVARAGQNGYHHRTE+NKK+Y++GKVG E H A TE+DRTEKD+TPMGGF
Sbjct: 255 GAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGF 314

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 372
           PHYG+VK DYLMIKGCCVGPKKRVVTL QSLL QTSRLALEEIKLKF+DT+S FGHGRFQ
Sbjct: 315 PHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLKFIDTASIFGHGRFQ 374

Query: 373 TTDEKQRFYGKL 408
           T+ EK RFY ++
Sbjct: 375 TSLEKMRFYNRV 386

to top

>RL3_DROME (O16797) 60S ribosomal protein L3|
          Length = 415

 Score =  192 bits (487), Expect = 8e-49
 Identities = 94/140 (67%), Positives = 109/140 (77%), Gaps = 7/140 (5%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKD 171
           GAWHP+RVS TVARAGQ GYHHRTE+NKK+Y+IG  G  T D       ASTE+D T+K 
Sbjct: 254 GAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG-AGIHTKDGKVIKNNASTEYDLTDKS 312

Query: 172 ITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSK 351
           ITPMGGFPHYG V  D++MIKGCC+G KKR++TL +SLLK T R ALE+IKLKF+DTSSK
Sbjct: 313 ITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSK 372

Query: 352 FGHGRFQTTDEKQRFYGKLK 411
            GHGRFQT  +K  F G LK
Sbjct: 373 MGHGRFQTPADKLAFMGPLK 392

to top

>RL3_TOXCA (P49149) 60S ribosomal protein L3|
          Length = 401

 Score =  185 bits (470), Expect = 7e-47
 Identities = 85/136 (62%), Positives = 107/136 (78%), Gaps = 3/136 (2%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPM 183
           GAWHP+RV +TVARAGQ GYHHRTE+NKK+Y++GK     +   +  T++D TEK + PM
Sbjct: 254 GAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKNGGTDYDITEKSVNPM 313

Query: 184 GGFPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHG 363
           GGFPHYG+V  D++MI+GCCVG KKR +TL +SL+ QT R A E+I LK++DTSSKFGHG
Sbjct: 314 GGFPHYGLVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKFGHG 373

Query: 364 RFQTTDEKQRFYGKLK 411
           RFQT  EK+ F GKLK
Sbjct: 374 RFQTHAEKRAFMGKLK 389

to top

>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)|
          Length = 402

 Score =  181 bits (459), Expect = 1e-45
 Identities = 89/139 (64%), Positives = 111/139 (79%), Gaps = 6/139 (4%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-HDASTEFDRTEKDI 174
           GAWHPARV++TVARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I
Sbjct: 254 GAWHPARVAFTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSI 313

Query: 175 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKF 354
            P+GGF HYG V  D++M+KGC VG KKRV+TL +SLL QT R ALE+I LKF+DT+SKF
Sbjct: 314 NPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKF 373

Query: 355 GHGRFQTTDEKQRFYGKLK 411
           GHGRFQT +EK+ F G LK
Sbjct: 374 GHGRFQTMEEKKAFMGPLK 392

to top

>RL3_CAEEL (P50880) 60S ribosomal protein L3|
          Length = 401

 Score =  181 bits (458), Expect = 2e-45
 Identities = 84/136 (61%), Positives = 109/136 (80%), Gaps = 3/136 (2%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVG---QETHDASTEFDRTEKDITPM 183
           GAWHP+RV++TVARAGQ G+HHRT +N K+Y+IGK     +  ++ STEFD T+K ITPM
Sbjct: 255 GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPM 314

Query: 184 GGFPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHG 363
           GGFP YG+V  DY+M++G  +GPKKR++TL +SL+ QT R+A E+I LK++DTSSK GHG
Sbjct: 315 GGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHG 374

Query: 364 RFQTTDEKQRFYGKLK 411
           RFQTT EK+ F GKLK
Sbjct: 375 RFQTTAEKRAFMGKLK 390

to top

>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)|
          Length = 402

 Score =  179 bits (455), Expect = 4e-45
 Identities = 88/139 (63%), Positives = 111/139 (79%), Gaps = 6/139 (4%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-HDASTEFDRTEKDI 174
           GAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I
Sbjct: 254 GAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSI 313

Query: 175 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKF 354
            P+GGF HYG V  D++M+KGC VG KKRV+TL +SLL QT R ALE+I LKF+DT+SKF
Sbjct: 314 NPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKF 373

Query: 355 GHGRFQTTDEKQRFYGKLK 411
           GHGRFQT +EK+ F G LK
Sbjct: 374 GHGRFQTMEEKKAFMGPLK 392

to top

>RL3_BOVIN (P39872) 60S ribosomal protein L3|
          Length = 402

 Score =  179 bits (455), Expect = 4e-45
 Identities = 88/139 (63%), Positives = 111/139 (79%), Gaps = 6/139 (4%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-HDASTEFDRTEKDI 174
           GAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I
Sbjct: 254 GAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSI 313

Query: 175 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKF 354
            P+GGF HYG V  D++M+KGC VG KKRV+TL +SLL QT R ALE+I LKF+DT+SKF
Sbjct: 314 NPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKF 373

Query: 355 GHGRFQTTDEKQRFYGKLK 411
           GHGRFQT +EK+ F G LK
Sbjct: 374 GHGRFQTVEEKKAFMGPLK 392

to top

>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)|
           (TARBP-B)
          Length = 402

 Score =  179 bits (454), Expect = 5e-45
 Identities = 88/139 (63%), Positives = 111/139 (79%), Gaps = 6/139 (4%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-HDASTEFDRTEKDI 174
           GAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I
Sbjct: 254 GAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSI 313

Query: 175 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKF 354
            P+GGF HYG V  D++M+KGC VG KKRV+TL +SLL QT R ALE+I LKF+DT+SKF
Sbjct: 314 NPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKF 373

Query: 355 GHGRFQTTDEKQRFYGKLK 411
           GHGRFQT +EK+ F G LK
Sbjct: 374 GHGRFQTMEEKKAFMGPLK 392

to top

>RL3_ASHGO (Q759R7) 60S ribosomal protein L3|
          Length = 388

 Score =  178 bits (452), Expect = 9e-45
 Identities = 88/133 (66%), Positives = 103/133 (77%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GAWHPA V +TVARAGQNGYHHRT +N KVY+IGK G E + A+TEFDRT+K ITPMGGF
Sbjct: 254 GAWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDEGN-AATEFDRTKKTITPMGGF 312

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 372
            HYG V  D++M+KG   G +KRVVTL +SL   TSR ALEE+ LK++DT+SKFG GRFQ
Sbjct: 313 VHYGAVNNDFVMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKWIDTASKFGKGRFQ 372

Query: 373 TTDEKQRFYGKLK 411
           T  EK  F G LK
Sbjct: 373 TPAEKHAFMGTLK 385

to top

>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3|
          Length = 401

 Score =  177 bits (450), Expect = 1e-44
 Identities = 83/136 (61%), Positives = 108/136 (79%), Gaps = 3/136 (2%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVG---QETHDASTEFDRTEKDITPM 183
           GAWHP+RV++TVARAGQ G+HHRT +N K+Y+IGK     +  ++ STEFD T+K I PM
Sbjct: 255 GAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPM 314

Query: 184 GGFPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHG 363
           GGFP YG+V  DY+M++G  +GPKKR++TL +SL+ QT R+A E+I LK++DTSSK GHG
Sbjct: 315 GGFPRYGLVNQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHG 374

Query: 364 RFQTTDEKQRFYGKLK 411
           RFQTT EK+ F GKLK
Sbjct: 375 RFQTTAEKRAFMGKLK 390

to top

>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like|
          Length = 406

 Score =  176 bits (447), Expect = 3e-44
 Identities = 86/140 (61%), Positives = 104/140 (74%), Gaps = 7/140 (5%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKD 171
           GAWHPARV  ++ARAGQ GYHHRTE+NKK+Y+IG+ G    D       AST +D T+K 
Sbjct: 254 GAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGR-GLHMEDGKVVKNNASTSYDVTDKS 312

Query: 172 ITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSK 351
           ITP+GGFPHYG V  D++M+KGC  G KKRV+TL +SLL   SR ALE I+LKF+DT+SK
Sbjct: 313 ITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSK 372

Query: 352 FGHGRFQTTDEKQRFYGKLK 411
           FGHGRFQT  EK+ F G  K
Sbjct: 373 FGHGRFQTAQEKRAFMGPQK 392

to top

>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3|
          Length = 402

 Score =  174 bits (440), Expect = 2e-43
 Identities = 87/139 (62%), Positives = 110/139 (79%), Gaps = 6/139 (4%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQET-HDASTEFDRTEKDI 174
           GA HPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++AST++D ++K I
Sbjct: 254 GARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSI 313

Query: 175 TPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKF 354
            P+GGF HYG V  D++M+KGC VG KKRV+TL +SLL QT R ALE+I LKF+DT+SKF
Sbjct: 314 NPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKF 373

Query: 355 GHGRFQTTDEKQRFYGKLK 411
           GHGRFQT +EK+ F G LK
Sbjct: 374 GHGRFQTMEEKKAFMGPLK 392

to top

>RL3_DICDI (P34113) 60S ribosomal protein L3|
          Length = 397

 Score =  173 bits (438), Expect = 4e-43
 Identities = 81/137 (59%), Positives = 102/137 (74%), Gaps = 4/137 (2%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKV----GQETHDASTEFDRTEKDITP 180
           GAWHP+RVS TV RAGQ GYHHR E NKK+Y+IG+     G++     TEFD TEK I P
Sbjct: 255 GAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINP 314

Query: 181 MGGFPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGH 360
           MGGF HYG+VK ++LM+KGC  GP+KR +TL +S+  QT R ALE+I LKF+DTSSKFGH
Sbjct: 315 MGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGH 374

Query: 361 GRFQTTDEKQRFYGKLK 411
           G  QT ++K +++G  K
Sbjct: 375 GLHQTAEDKTKYFGVKK 391

to top

>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like|
          Length = 406

 Score =  173 bits (438), Expect = 4e-43
 Identities = 84/140 (60%), Positives = 103/140 (73%), Gaps = 7/140 (5%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKD 171
           GAWHPARV  ++ARAGQ GYHHRTE+NKK+++IG+ G    D       AST +D T K 
Sbjct: 254 GAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGR-GPHMEDGKLVKNNASTSYDVTAKS 312

Query: 172 ITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSK 351
           ITP+GGFPHYG V  D++M+KGC  G KKRV+TL +SLL   SR A+E I+LKF+DT+SK
Sbjct: 313 ITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSK 372

Query: 352 FGHGRFQTTDEKQRFYGKLK 411
           FGHGRFQT  EK+ F G  K
Sbjct: 373 FGHGRFQTAQEKRAFMGPQK 392

to top

>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3|
          Length = 387

 Score =  171 bits (433), Expect = 1e-42
 Identities = 82/133 (61%), Positives = 102/133 (76%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GAWHPA V ++VARAGQ GYHHRT +N KVY++GK G +  +A+TEFDRT+K ITPMGGF
Sbjct: 253 GAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGK-GDDEANAATEFDRTKKTITPMGGF 311

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 372
            HYG +  D++++KG   G +KRVVTL +SL   TSR ALEE+ LK++DT+SKFG GRFQ
Sbjct: 312 VHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQ 371

Query: 373 TTDEKQRFYGKLK 411
           T  EK  F G LK
Sbjct: 372 TPAEKHAFLGTLK 384

to top

>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of|
           killer protein 8) (Trichodermin resistance protein)
          Length = 386

 Score =  171 bits (432), Expect = 2e-42
 Identities = 80/133 (60%), Positives = 101/133 (75%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GAWHPA V ++VARAGQ GYH RT +N K+Y++GK G +  + +T FDRT+K ITPMGGF
Sbjct: 252 GAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGK-GDDEANGATSFDRTKKTITPMGGF 310

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 372
            HYG +K D++M+KGC  G +KR+VTL +SL   TSR ALEE+ LK++DT+SKFG GRFQ
Sbjct: 311 VHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQ 370

Query: 373 TTDEKQRFYGKLK 411
           T  EK  F G LK
Sbjct: 371 TPAEKHAFMGTLK 383

to top

>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)|
          Length = 392

 Score =  169 bits (428), Expect = 5e-42
 Identities = 82/133 (61%), Positives = 103/133 (77%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GAWHP+ V +TVARAGQ GYHHRT  N KV++IGK G +  +AST+FD ++K ITPMGGF
Sbjct: 254 GAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGK-GSDEGNASTDFDISKKQITPMGGF 312

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 372
             YG VK DY+M+KG   G KKRV+TL ++L  QTSR A E+++LK++DTSSKFGHG FQ
Sbjct: 313 VRYGEVKNDYIMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELKWIDTSSKFGHGAFQ 372

Query: 373 TTDEKQRFYGKLK 411
           T +EK+ F G LK
Sbjct: 373 TPEEKRAFMGTLK 385

to top

>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3|
          Length = 387

 Score =  169 bits (428), Expect = 5e-42
 Identities = 82/133 (61%), Positives = 101/133 (75%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GAWHPA V ++VARAGQ GYHHRT +N K+Y+IGK G +  +A+T FDRT+K I PMGGF
Sbjct: 253 GAWHPAHVMWSVARAGQRGYHHRTSINHKIYRIGK-GDDEGNAATNFDRTKKTINPMGGF 311

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 372
            HYG+V  D++M+KG   G KKRVVTL +SL   TSR A+EE+ LK++DT+SKFG GRFQ
Sbjct: 312 VHYGMVNNDFVMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTLKWIDTASKFGKGRFQ 371

Query: 373 TTDEKQRFYGKLK 411
           T  EK  F G LK
Sbjct: 372 TPAEKHAFMGTLK 384

to top

>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B|
          Length = 387

 Score =  167 bits (424), Expect = 2e-41
 Identities = 81/133 (60%), Positives = 101/133 (75%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GAWHPA V +TVARAG  GY HRT++N K+Y+IG  G +  +AST+FD TEK ITPMGGF
Sbjct: 252 GAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGF 310

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 372
             YGVV+ D++M+ G   GP KRV+TL +SLL  TSR ALE + LK++DT+SKFGHGRFQ
Sbjct: 311 VRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQ 370

Query: 373 TTDEKQRFYGKLK 411
           T  E ++F G LK
Sbjct: 371 TPAEAKQFLGTLK 383

to top

>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A|
          Length = 387

 Score =  167 bits (424), Expect = 2e-41
 Identities = 81/133 (60%), Positives = 101/133 (75%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GAWHPA V +TVARAG  GY HRT++N K+Y+IG  G +  +AST+FD TEK ITPMGGF
Sbjct: 252 GAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGF 310

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 372
             YGVV+ D++M+ G   GP KRV+TL +SLL  TSR ALE + LK++DT+SKFGHGRFQ
Sbjct: 311 VRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQ 370

Query: 373 TTDEKQRFYGKLK 411
           T  E ++F G LK
Sbjct: 371 TPAEAKQFLGTLK 383

to top

>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3|
          Length = 389

 Score =  166 bits (419), Expect = 6e-41
 Identities = 80/133 (60%), Positives = 98/133 (73%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GAWHPA V +TVARAGQNG+HHRT +N KVY++G  G E+  A TEFDRT+K I PMGGF
Sbjct: 253 GAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDESSGA-TEFDRTKKTINPMGGF 311

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 372
             YG VK D++++KG   G KKR+VT+ +SL   TSR A E + LK++DT+SKFG GRFQ
Sbjct: 312 VRYGNVKNDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKWIDTASKFGKGRFQ 371

Query: 373 TTDEKQRFYGKLK 411
           T  EK  F G LK
Sbjct: 372 TPAEKHAFLGTLK 384

to top

>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3|
          Length = 383

 Score =  164 bits (416), Expect = 1e-40
 Identities = 82/133 (61%), Positives = 101/133 (75%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GAWHP+RV Y++ARAGQ G+H RTE NK+VY IG     + +  TEFD TEK I+PMGGF
Sbjct: 249 GAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGN---GSSNIKTEFDLTEKPISPMGGF 305

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 372
           PHYG V+ D++M+KG  VG +KRVVTL +SLL+Q    A EE+ +KFVDTSSK GHGRFQ
Sbjct: 306 PHYGEVRNDFIMVKGAVVGARKRVVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQ 362

Query: 373 TTDEKQRFYGKLK 411
           T+ EK+ FYG  K
Sbjct: 363 TSAEKKAFYGARK 375

to top

>RL3_NEUCR (P59671) 60S ribosomal protein L3|
          Length = 392

 Score =  162 bits (410), Expect = 6e-40
 Identities = 78/133 (58%), Positives = 100/133 (75%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GAWHP+ V +TVARAGQ GYHHRT +N K+Y+IGK G     A+TE D T+K ITPMGGF
Sbjct: 254 GAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGK-GDAEDSAATEVDVTKKKITPMGGF 312

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQ 372
             YG +  D++M+KG   G KKRV+TL +S+   TSR ALE+++LK++DTSS+FGHG FQ
Sbjct: 313 VRYGEINNDFVMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKWIDTSSEFGHGAFQ 372

Query: 373 TTDEKQRFYGKLK 411
           T  EK++F G LK
Sbjct: 373 TPAEKKQFQGTLK 385

to top

>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P|
          Length = 365

 Score =  100 bits (249), Expect = 3e-21
 Identities = 47/113 (41%), Positives = 72/113 (63%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           G WHPARV +TV  AGQ G+HHRTE+NK++  IG+ G+   D +TE      +ITP GGF
Sbjct: 257 GPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLKLDENTEI-----EITPKGGF 311

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSK 351
           PHYG+V++D++MI G   G  KR++ +  ++     +  ++  ++ +V   SK
Sbjct: 312 PHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 364

to top

>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P|
          Length = 346

 Score =  100 bits (248), Expect = 4e-21
 Identities = 48/113 (42%), Positives = 71/113 (62%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           G WHPARV +TV +AGQ G+HHRTE NK++  IG+ G+         D  E +ITP GGF
Sbjct: 239 GPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGK------LVLDGNEIEITPKGGF 292

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSK 351
           PHYG+V++D+LMI+G   G  KR++ +  ++     +  +E  ++ +V   SK
Sbjct: 293 PHYGIVRSDFLMIEGTIPGSFKRIIRVRPAIRPPKKKPPVERPQITYVSRESK 345

to top

>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P|
          Length = 361

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 46/113 (40%), Positives = 70/113 (61%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           G WHPARV +TV  AGQ G+HHRTE+NK++  IG+ G+         D  E +ITP GGF
Sbjct: 254 GPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK------LVIDGNEIEITPKGGF 307

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSK 351
           PHYG+V++D++MI G   G  KR++ +  ++     +  ++  ++ +V   SK
Sbjct: 308 PHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 360

to top

>RL3_PYRHO (O59418) 50S ribosomal protein L3P|
          Length = 362

 Score = 97.4 bits (241), Expect = 3e-20
 Identities = 46/113 (40%), Positives = 69/113 (61%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           G WHPARV +TV  AGQ G+HHRTE+NK++  IG+ G+         D  E +ITP GGF
Sbjct: 255 GPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK------LVIDGNEIEITPKGGF 308

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSK 351
           PHYG+V+ D++MI G   G  KR++ +  ++     +  ++  ++ +V   SK
Sbjct: 309 PHYGIVRGDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 361

to top

>RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)|
          Length = 130

 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 42/79 (53%), Positives = 58/79 (73%), Gaps = 6/79 (7%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDI 174
           GAWHPAR +++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++  T++D ++K I
Sbjct: 52  GAWHPARXAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSI 111

Query: 175 TPMGGFPHYGVVKADYLMI 231
            P+G F HYG V  D++M+
Sbjct: 112 NPLGRFVHYGEVTNDFVML 130

to top

>RL3_METJA (P54014) 50S ribosomal protein L3P|
          Length = 335

 Score = 85.9 bits (211), Expect = 8e-17
 Identities = 45/115 (39%), Positives = 65/115 (56%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           G W P  V ++V   GQ GYH RTE NK++ KIG  G E              ITP GGF
Sbjct: 236 GPWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE--------------ITPKGGF 281

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFG 357
            HYGV++ +Y+++KG   GP KR++ L +++  Q   + + EI   ++ T+SK G
Sbjct: 282 LHYGVIRNNYVVLKGSVQGPAKRLIVLRRAIRPQEPLIKVPEI--TYISTTSKQG 334

to top

>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P|
          Length = 337

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 45/115 (39%), Positives = 67/115 (58%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           GA++P+RVS+ V + GQ GYH RTE NK++ KIG  G+E              +TP GGF
Sbjct: 239 GAFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE--------------VTPEGGF 284

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFG 357
            +YG+V+ DY++IKG   GP KR++ L   +  +  +  L E  + ++   SK G
Sbjct: 285 INYGLVRGDYILIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337

to top

>RL3_ARCFU (O28354) 50S ribosomal protein L3P|
          Length = 331

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 42/115 (36%), Positives = 67/115 (58%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           G W+P  V +TV +AGQ G+H RTE NK++ KIG+ G+E              ITP GGF
Sbjct: 232 GPWNPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE--------------ITPKGGF 277

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFG 357
            HYGV++  Y+++ G   GP KR++ +  ++  +  +   + + + +V T+SK G
Sbjct: 278 LHYGVIRTQYVLVTGSVPGPVKRLIRMRDAI--RPPKAHFDGVNIVYVSTTSKQG 330

to top

>RL3_METTH (O26110) 50S ribosomal protein L3P|
          Length = 337

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKD-ITPMGG 189
           G W P+R  +TV +AGQ GYH RTE NK++ KIG             D +E D + P GG
Sbjct: 236 GPWTPSRTMWTVPQAGQMGYHRRTEYNKQILKIG-------------DASEADLVNPDGG 282

Query: 190 FPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFG 357
           F  YG+V+ DY+MIKG   GP KR+V L +++  + +    E  ++ ++ T+SK G
Sbjct: 283 FVRYGLVRNDYVMIKGSVPGPTKRLVVLRKAI--RAAGKQEEAPQINYISTASKQG 336

to top

>RL3_METMA (Q8PV50) 50S ribosomal protein L3P|
          Length = 337

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 44/115 (38%), Positives = 67/115 (58%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           G+++P+RVS+ V + GQ GYH RTE NK++ KIG  G+E              +TP GGF
Sbjct: 239 GSFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE--------------VTPEGGF 284

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFG 357
            +YG+V+ DY++IKG   GP KR++ L   +  +  +  L E  + ++   SK G
Sbjct: 285 INYGLVRGDYVLIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337

to top

>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P|
          Length = 334

 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 45/116 (38%), Positives = 62/116 (53%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           G W P RV +TV  AGQ G+H RTE NK++ K+G  G E              ITP GGF
Sbjct: 235 GPWRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE--------------ITPKGGF 280

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFGH 360
            +YG VK  Y+++KG   GP KR+V L  ++     +  L E+   ++   SK G+
Sbjct: 281 LNYGAVKNGYVVVKGTVQGPAKRLVVLRGAVRPAEDKFGLPEV--TYISKESKQGN 334

to top

>RL3_METKA (Q8TY90) 50S ribosomal protein L3P|
          Length = 361

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 40/81 (49%), Positives = 52/81 (64%)
 Frame = +1

Query: 25  PARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYG 204
           P+RV +TV  AGQ GYH RTE NK++ KIG+ G+E              +TP GGF +YG
Sbjct: 246 PSRVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEE--------------VTPRGGFVNYG 291

Query: 205 VVKADYLMIKGCCVGPKKRVV 267
           VV+ DY+MI G   GPKKR++
Sbjct: 292 VVRGDYIMIHGTVPGPKKRLI 312

to top

>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P|
          Length = 338

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 37/80 (46%), Positives = 47/80 (58%)
 Frame = +1

Query: 34  VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 213
           V +T  R GQ G+H RTE NK++ KIG+ G E              ITP  GFPHYGVVK
Sbjct: 247 VMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE--------------ITPKSGFPHYGVVK 292

Query: 214 ADYLMIKGCCVGPKKRVVTL 273
             Y++I+G   G +KR+V L
Sbjct: 293 GPYILIQGSVPGARKRLVVL 312

to top

>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P|
          Length = 334

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 42/115 (36%), Positives = 60/115 (52%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           G W+P+RV  TV + GQ GYH RTE+NK++  I   G E               TP GGF
Sbjct: 237 GPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIND-GDEP--------------TPDGGF 281

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFG 357
           P+YG V   Y ++KG   GP++R+V    ++    S     E+  ++V T+S  G
Sbjct: 282 PNYGEVDGPYTLVKGSVPGPEQRLVRFRPAVRPNESPRLDPEV--RYVSTASNQG 334

to top

>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P|
          Length = 331

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 42/115 (36%), Positives = 58/115 (50%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           G WHP  V  TV +AGQ GY  RT  N +V K  K      DA T        I   GGF
Sbjct: 230 GPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSK----GEDADT--------INVRGGF 277

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFG 357
            HYG+VK DY+++ G   GP KR++ +     ++     ++ +KL ++   SK G
Sbjct: 278 LHYGLVKNDYVLLFGSVPGPAKRLIKMRDPARQKVP--DIDNVKLDYISLESKQG 330

to top

>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)|
          Length = 337

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 35/85 (41%), Positives = 47/85 (55%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           G W+P+RV  TV + GQ GYH RTE+NK++  IG+  + T D               GGF
Sbjct: 240 GPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD---------------GGF 284

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVV 267
            +YG V   Y ++KG   GP KR+V
Sbjct: 285 VNYGEVDGPYTLVKGSVPGPDKRLV 309

to top

>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P|
          Length = 331

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 41/115 (35%), Positives = 57/115 (49%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           G WHP  V  TV +AGQ G+  RT  N +V K G           E D     I   GGF
Sbjct: 230 GPWHPDWVRNTVPQAGQMGFQQRTISNVRVIKYGN--------KEEVD----SINVRGGF 277

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDTSSKFG 357
            HYG VK DY+++ G   G  KR++ +     ++     +EE+KL+++   SK G
Sbjct: 278 LHYGFVKNDYVLLFGSIPGASKRLIKMRDPARQKVP--DIEEVKLEYISLESKQG 330

to top

>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P|
          Length = 351

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 31/79 (39%), Positives = 44/79 (55%)
 Frame = +1

Query: 37  SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 216
           SYT  + GQ G+H RTE NK++ KIG                 K+I P GGF  YG+V+ 
Sbjct: 262 SYT-PQPGQLGFHRRTEYNKRIIKIGD--------------EPKEINPAGGFVRYGIVRN 306

Query: 217 DYLMIKGCCVGPKKRVVTL 273
            Y++++G  +G KKR + L
Sbjct: 307 TYVLLEGSILGSKKRPIFL 325

to top

>RL3_SULTO (Q975I1) 50S ribosomal protein L3P|
          Length = 343

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 31/76 (40%), Positives = 41/76 (53%)
 Frame = +1

Query: 46  VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 225
           V + GQ GYH RTE NK++ KI     E              I P GGF +YG+V+  YL
Sbjct: 256 VPQPGQMGYHRRTEYNKRILKISDDPNE--------------INPKGGFVNYGIVRNTYL 301

Query: 226 MIKGCCVGPKKRVVTL 273
           +I+G  +G KKR + L
Sbjct: 302 IIEGSIIGAKKRPLFL 317

to top

>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P|
          Length = 344

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
 Frame = +1

Query: 22  HPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHY 201
           H     +   +AGQ G+H RTE NK++  I   G +              +TP GGF  Y
Sbjct: 244 HGRSTFWETPQAGQTGFHRRTEYNKRILMIDDDGYK--------------VTPAGGFLRY 289

Query: 202 GVVKADYLMIKGCCVGPKKRVVTLCQSLL--KQTSRLALEEIKLKFVDTSSKFG 357
           GVV++ ++M+ G   G  KR + +  ++   +   +L + + ++ ++  +SK G
Sbjct: 290 GVVRSTFVMLSGSIPGTPKRPIVMRWAIRPPEWYLKLGVRKPEITYISLASKQG 343

to top

>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P|
          Length = 342

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 29/76 (38%), Positives = 41/76 (53%)
 Frame = +1

Query: 46  VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 225
           V + GQ G+H RTE NK++ KIG                  +I P GG  +YG+VK  YL
Sbjct: 255 VPQPGQLGFHRRTEYNKRIIKIGD--------------NVNEINPAGGIVNYGLVKNTYL 300

Query: 226 MIKGCCVGPKKRVVTL 273
           +I+G  +G +KR + L
Sbjct: 301 VIEGSVLGSRKRPLFL 316

to top

>RL3_NANEQ (P60458) 50S ribosomal protein L3P|
          Length = 321

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 32/104 (30%), Positives = 50/104 (48%)
 Frame = +1

Query: 13  GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGF 192
           G+  P R+  TV   GQ GYH RTE NK + KIG                 + +   GG+
Sbjct: 227 GSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIG-----------------EPLNVEGGW 269

Query: 193 PHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIK 324
             YG V    +++KG   GP+KR++ L +++     +  +E I+
Sbjct: 270 VRYGQVIGPTILLKGSVPGPRKRLIILREAIRPPRKQEKVEGIE 313

to top

>RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
 Frame = -1

Query: 468 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 313
           + H+ F   +++T+++LR+S+ L+  I+ L   G  E A      P++   + K   DF 
Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233

Query: 312 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 139
           Q    G + + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

to top

>RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
 Frame = -1

Query: 468 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 313
           + H+ F   +++T+++LR+S+ L+  I+ L   G  E A      P++   + K   DF 
Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233

Query: 312 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 139
           Q    G + + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

to top

>RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 335

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
 Frame = -1

Query: 468 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 313
           + H+ F   +++T+++LR+S  L+  I+ L   G  E A      P++   + K   DF 
Sbjct: 177 IDHLEFYTEEQLTEIVLRTSGILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233

Query: 312 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 139
           Q    G + + LA+   TLL  D   LD     L HTI+ ++  G  V L  +  S G
Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290

to top

>CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (EC 4.6.1.1)|
           (ATP pyrophosphate-lyase) (Adenylyl cyclase) (Fragment)
          Length = 572

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = +1

Query: 34  VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQ-----ETHDASTEFDRTEKDITPMGGFPH 198
           + Y     G + Y        +   +G  GQ     ET+ + +  +R++ D+TP+GG P 
Sbjct: 401 IRYDEVTKGYDYYGQTANTAARTESVGNGGQVLMTCETYHSLSTAERSQFDVTPLGGVPL 460

Query: 199 YGV 207
            GV
Sbjct: 461 RGV 463

to top

>IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)|
          Length = 363

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -1

Query: 423 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 274
           SS+++ L I   +L+  L TA  KLG  +  +  D  +     +++QGLA
Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152

to top

>IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)|
          Length = 363

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -1

Query: 423 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 274
           SS+++ L I   +L+  L TA  KLG  +  +  D  +     +++QGLA
Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152

to top

>ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor (ICAM-5)|
           (Telencephalin)
          Length = 924

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 16/66 (24%), Positives = 27/66 (40%)
 Frame = -1

Query: 369 ETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVRE 190
           E+  P     ++  E   L C  RG    G+      + WP+   +  +  G +H +   
Sbjct: 670 ESTCPSHQTWLEGAEASALACAARGRPSPGVRCSREGIPWPEQQRVSREDAGTYHCVATN 729

Query: 189 ATHGSD 172
           A HG+D
Sbjct: 730 A-HGTD 734

to top

>HEM3_DESVH (Q72AV0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 315

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = -1

Query: 429 LRSSSSLELAIEPLL----LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHH 262
           LR  S L LA+ P L    L G ++T + KL  G    E D +   T GL + GLA  HH
Sbjct: 129 LRRQSQL-LALRPDLDIISLRGNVDTRLRKLMDG----EFDAIVMATAGLKRLGLAAPHH 183

Query: 261 TLLWP 247
            +L P
Sbjct: 184 EVLAP 188

to top

>RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 366

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
 Frame = -1

Query: 447 KMTQLILRSSSSLELAIEPLL--LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 274
           ++ +++LR+S  L + ++P    ++     + P+L         D+ Q +T+G ++  + 
Sbjct: 216 ELAEIVLRNSKKLNIEVDPTSAGVIADRSRSTPRLANNRLLWVRDYAQSKTKGNVEASVC 275

Query: 273 EGHHTLLWPDTASLDHQVVGLHHTIVR 193
           E    ++  D   LD Q      T++R
Sbjct: 276 EAALDMIGIDHLGLDKQDRNYLDTLMR 302

to top

>PNKP_HUMAN (Q96T60) Bifunctional polynucleotide phosphatase/kinase|
           (Polynucleotide kinase-3'-phosphatase) (DNA
           5'-kinase/3'-phosphatase) [Includes: Polynucleotide
           3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase);
           Polynucleotide 5'-hydroxyl-kinase (
          Length = 521

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
 Frame = +1

Query: 187 GFPHYG--------VVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALE 315
           GFP  G        +V A Y+ +    +G  +R VT C++ LKQ  R+A++
Sbjct: 372 GFPGAGKSTFLKKHLVSAGYVHVNRDTLGSWQRCVTTCETALKQGKRVAID 422

to top

>BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA)|
            (Hemidesmosomal plaque protein) (Dystonia musculorum
            protein) (Dystonin)
          Length = 7389

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 18/55 (32%), Positives = 33/55 (60%)
 Frame = -1

Query: 456  RFDKMTQLILRSSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGL 292
            R+  +T+L    + +LE A++   L G L++   +L   +DK+E++ L  ET+GL
Sbjct: 5516 RYKDITKLSADVAKTLEHALQ---LAGQLQSMHKELCNWLDKVEVELLSYETQGL 5567

to top

>RUVB_ENTFA (Q839T5) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 338

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
 Frame = -1

Query: 468 VSHVRF---DKMTQLILRSSSSLELAI--EPLLLVGGLETAVPKLGRGVDKLELDFLQCE 304
           +SH+ +     + +++LRS+   +  I  E    +       P++   + K   DF Q +
Sbjct: 178 ISHMEYYQEQDLKEIVLRSADIFQTEIFEEGAFEIARRSRGTPRIANRLLKRVRDFAQVQ 237

Query: 303 TRGLLQQGLAEGHHTLLWPDTASLDH 226
           + G + + +A+   TLL  D   LD+
Sbjct: 238 SDGKIDRAIADKALTLLQVDHQGLDY 263

to top

>LPH_RAT (Q02401) Lactase-phlorizin hydrolase precursor|
            (Lactase-glycosylceramidase) [Includes: Lactase (EC
            3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]
          Length = 1928

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 9/129 (6%)
 Frame = +1

Query: 10   EGAWHPARVSYTVARAGQNGYHHRTEMNKKVYK-IGKVGQETHDASTEFDRTEKDIT--- 177
            E  W P +VS+ V +A    YH   E  +   K +  +   TH A  +    ++D+    
Sbjct: 1087 EPGWLPYKVSHIVIKAHARVYHTYDEKYRSEQKGVISLSLNTHWAEPKDPGLQRDVEAAD 1146

Query: 178  -----PMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLCQSLLKQTSRLALEEIKLKFVDT 342
                  MG F H      DY  +    VG +  +  L  S L   +    EE K     T
Sbjct: 1147 RMLQFTMGWFAHPIFKNGDYPDVMKWTVGNRSELQHLASSRLPTFT----EEEKNYVRGT 1202

Query: 343  SSKFGHGRF 369
            +  F H  +
Sbjct: 1203 ADVFCHNTY 1211

to top

>LAMA1_MOUSE (P19137) Laminin alpha-1 chain precursor (Laminin A chain)|
          Length = 3084

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 127  ETHDASTEFDRTEKDITPMGGFPHYGVVK 213
            ET  A+++ +R EKD+  +GG PH   V+
Sbjct: 2426 ETPGAASDLNRLEKDLIYVGGLPHSKAVR 2454

to top

>MGAT2_HUMAN (Q10469) Alpha-1,6-mannosyl-glycoprotein|
           2-beta-N-acetylglucosaminyltransferase (EC 2.4.1.143)
           (Mannoside acetylglucosaminyltransferase 2)
           (N-glycosyl-oligosaccharide-glycoprotein
           N-acetylglucosaminyltransferase II)
           (Beta-1,2-N-acetylglucosam
          Length = 447

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = -3

Query: 376 WSGNGRAQTWKRCRQT*A*FPPVRDERSASAGTGRGSPHASLA 248
           WS NGR       R+  A  PP+ D   A    GRG  H S+A
Sbjct: 25  WSSNGRQ------RKNEALAPPLLDAEPARGAGGRGGDHPSVA 61


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,538,180
Number of Sequences: 219361
Number of extensions: 1770680
Number of successful extensions: 4846
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 4670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4797
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result