ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags24j24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY347533.1| Triticum aestivum cultivar LI ribosomal protein L3 (RPL3) mRNA, RPL3-B3 allele, complete cds Length = 1170 Score = 644 bits (325), Expect = 0.0 Identities = 385/405 (95%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 766 ggtgcctggcatcctgctagggtgtcctacactgttgctcgtgctggtcagaatggatac 825 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 826 caccaccgaactgagatgaacaagaaggtctacaagattggcaaggttggacaggaaact 885 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 catgatgcctctaccgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 945 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || Sbjct: 946 cctcactatggtgtggtgaaggctgactacctgatgatcaagggatgctgtgttggcccc 1005 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| Sbjct: 1006 aagaagcgtgtggtgaccctccgccagtccctgctgaagcagacctctcgtcttgccctg 1065 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| |||||||||||||||||||| |||||||| || |||||| Sbjct: 1066 gaggagatcaagctcaagttcgtcgacacctcttccaagttcgggcacggtcgcttccag 1125 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggcttga 417 ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 1126 accacggacgagaagcagaggttctacggcaagctcaaggcttga 1170
>gb|AY347532.1| Triticum aestivum cultivar Falat ribosomal protein L3 (RPL3) mRNA, RPL3-B3 allele, complete cds Length = 1170 Score = 644 bits (325), Expect = 0.0 Identities = 385/405 (95%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 766 ggtgcctggcatcctgctagggtgtcctacactgttgctcgtgctggtcagaatggatac 825 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 826 caccaccgaactgagatgaacaagaaggtctacaagattggcaaggttggacaggaaact 885 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 catgatgcctctaccgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 945 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || Sbjct: 946 cctcactatggtgtggtgaaggctgactacctgatgatcaagggatgctgtgttggcccc 1005 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| Sbjct: 1006 aagaagcgtgtggtgaccctccgccagtccctgctgaagcagacctctcgtcttgccctg 1065 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| |||||||||||||||||||| |||||||| || |||||| Sbjct: 1066 gaggagatcaagctcaagttcgtcgacacctcttccaagttcgggcacggtcgcttccag 1125 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggcttga 417 ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 1126 accacggacgagaagcagaggttctacggcaagctcaaggcttga 1170
>dbj|AK101469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040J04, full insert sequence Length = 1403 Score = 426 bits (215), Expect = e-116 Identities = 356/403 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 842 ggtgcctggcatcctgctagggtttcctatactgttgctcgcgctggtcagaatgggtac 901 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || ||||||||||| |||||||| |||||||| |||||| ||| ||||||| | Sbjct: 902 caccaccgcactgagatgaataagaaggtttacaagatcggcaagtctggccaggaaagc 961 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 |||| ||||| ||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 962 catgctgcctgcactgaatttgacaggactgagaaggacatcactcccatgggtggcttc 1021 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 |||||||| ||||| ||||||| ||||||||| ||||||||||| |||||||| || || Sbjct: 1022 cctcactacggtgttgtgaagggcgactacctcatgatcaagggttgctgtgttggcccc 1081 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | || || |||||| ||||||||||||| ||||||||||||||| | || || Sbjct: 1082 aagaagagggtcgtcaccctccgccagtccctgctcaagcagacctctcgtttggcgctc 1141 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| |||||||||| |||||||| |||||||| || |||||| Sbjct: 1142 gaggagatcaagctcaagttcatcgacacctcgtccaagttcgggcacggtcgcttccag 1201 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggctt 415 |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1202 accaccgacgagaaacagaggttcttcggcaagctcaaggctt 1244
>dbj|AK099225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094A07, full insert sequence Length = 1433 Score = 426 bits (215), Expect = e-116 Identities = 356/403 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 820 ggtgcctggcatcctgctagggtttcctatactgttgctcgcgctggtcagaatgggtac 879 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || ||||||||||| |||||||| |||||||| |||||| ||| ||||||| | Sbjct: 880 caccaccgcactgagatgaataagaaggtttacaagatcggcaagtctggccaggaaagc 939 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 |||| ||||| ||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 940 catgctgcctgcactgaatttgacaggactgagaaggacatcactcccatgggtggcttc 999 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 |||||||| ||||| ||||||| ||||||||| ||||||||||| |||||||| || || Sbjct: 1000 cctcactacggtgttgtgaagggcgactacctcatgatcaagggttgctgtgttggcccc 1059 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | || || |||||| ||||||||||||| ||||||||||||||| | || || Sbjct: 1060 aagaagagggtcgtcaccctccgccagtccctgctcaagcagacctctcgtttggcgctc 1119 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| |||||||||| |||||||| |||||||| || |||||| Sbjct: 1120 gaggagatcaagctcaagttcatcgacacctcgtccaagttcgggcacggtcgcttccag 1179 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggctt 415 |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1180 accaccgacgagaaacagaggttcttcggcaagctcaaggctt 1222
>dbj|AK073392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041E13, full insert sequence Length = 1486 Score = 426 bits (215), Expect = e-116 Identities = 356/403 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 859 ggtgcctggcatcctgctagggtttcctatactgttgctcgcgctggtcagaatgggtac 918 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || ||||||||||| |||||||| |||||||| |||||| ||| ||||||| | Sbjct: 919 caccaccgcactgagatgaataagaaggtttacaagatcggcaagtctggccaggaaagc 978 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 |||| ||||| ||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 979 catgctgcctgcactgaatttgacaggactgagaaggacatcactcccatgggtggcttc 1038 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 |||||||| ||||| ||||||| ||||||||| ||||||||||| |||||||| || || Sbjct: 1039 cctcactacggtgttgtgaagggcgactacctcatgatcaagggttgctgtgttggcccc 1098 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | || || |||||| ||||||||||||| ||||||||||||||| | || || Sbjct: 1099 aagaagagggtcgtcaccctccgccagtccctgctcaagcagacctctcgtttggcgctc 1158 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| |||||||||| |||||||| |||||||| || |||||| Sbjct: 1159 gaggagatcaagctcaagttcatcgacacctcgtccaagttcgggcacggtcgcttccag 1218 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggctt 415 |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1219 accaccgacgagaaacagaggttcttcggcaagctcaaggctt 1261
>gb|AF346004.1|AF346004 Lolium perenne L3 ribosomal protein mRNA, partial cds Length = 855 Score = 410 bits (207), Expect = e-111 Identities = 354/403 (87%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 |||||||||||||||||||||||||| ||||| || || || ||||| || ||||||||| Sbjct: 259 ggtgcctggcatcctgctagggtgtcttacaccgtggcccgtgctggccaaaatggatac 318 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || || ||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 319 caccaccgcacagagatgaacaagaaggtttataagattggcaaggttggacaggaaact 378 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 379 catgatgcctcgacagagtttgacaggactgagaaggacatcactcccatgggtggcttc 438 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 || ||||| ||||| ||||||| |||||||| ||||||||||| || ||||| ||||| Sbjct: 439 ccccactacggtgtagtgaagggtgactacctcatgatcaagggttgttgtgtggggccc 498 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | ||||| |||||| |||||||||| ||||||||||| || || | || || Sbjct: 499 aagaagagggtggttaccctccgccagtccctcctgaagcagacttcccgcttggctctc 558 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||| |||||||| ||| |||| |||||||||||||| || || |||||| Sbjct: 559 gaggagatcaagcttaagtttgttgacccctcatccaagtttgggcatggtcgattccag 618 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggctt 415 ||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 619 accaccgacgagaagcagaagttctacggcaagctcaaggctt 661
>gb|BT016630.1| Zea mays clone Contig463 mRNA sequence Length = 1432 Score = 408 bits (206), Expect = e-111 Identities = 362/414 (87%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||| |||||||| || || || ||||| || |||||||||||||| ||| Sbjct: 827 ggtgcatggcatccggctagggtctcgtatacggttgcccgtgctggtcagaatgggtac 886 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || ||||||||||||||||| || |||||||| ||||||| |||||| || ||| Sbjct: 887 caccaccgcactgagatgaacaagaaagtctacaagatcggcaaggctggacaagagacc 946 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 || |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 947 cacgatgcctccacagagtttgacaggaccgagaaggacatcactcccatgggtggcttc 1006 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 || ||||||||| | ||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 1007 ccccactatggtatcgtgaagggtgactacctgatgatcaagggatgctgtgtgggtcca 1066 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | |||||||||||| |||||||||| ||||||||||| || || || || ||| Sbjct: 1067 aagaagagggtggtgaccctccgccagtccctcctgaagcagacttcccggctggcgctg 1126 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| ||||||| || ||||| ||||||||||| || |||||| Sbjct: 1127 gaggagatcaagctcaagttcatcgacacatcgtccaaatttgggcacggtcgcttccag 1186 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggcttgagctgctgcg 426 || ||||| |||||||||||||||| ||| ||||||||||| | || ||||||| Sbjct: 1187 actaccgatgagaagcagaggttctttggtaagctcaaggcgtaaggtgctgcg 1240
>dbj|AK060925.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H11, full insert sequence Length = 1468 Score = 406 bits (205), Expect = e-110 Identities = 352/401 (87%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 |||||||||||||| || |||||||||||||||||||| || ||||||||||| |||||| Sbjct: 829 ggtgcctggcatccagccagggtgtcctacactgttgcccgtgctggtcagaacggatac 888 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || |||||||||||||||||||| ||||||||||||||| ||| ||||| | Sbjct: 889 caccaccgcactgagatgaacaagaaggtttacaagattggcaagtctggtcaggagtct 948 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 |||| |||| || |||||||||||||| |||||||||||||| || ||||| |||||| Sbjct: 949 catgcggcctgcaccgagttcgacaggactgagaaggacatcaccccgatgggcggcttc 1008 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 || ||||| ||||||||||||| ||||||||| ||||||||||| ||||| ||||| || Sbjct: 1009 ccgcactacggtgtggtgaagggcgactacctcatgatcaagggttgctgcgtcggtccg 1068 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | || || |||||| ||||||| ||||||||||||||||| || ||||| ||| Sbjct: 1069 aagaagagagtcgtcaccctccgccagtcgctgctgaagcagacctcgcggctcgccctg 1128 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| |||||||||| |||||||| |||||||| || |||||| Sbjct: 1129 gaggagatcaagctcaagttcatcgacacctcgtccaagttcgggcacggtcgcttccag 1188 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggc 413 ||||||||||||||||||||||||| |||||||||||||| Sbjct: 1189 accaccgacgagaagcagaggttcttcggcaagctcaaggc 1229
>dbj|D12630.1|RICRPL3A Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein L3, complete cds Length = 1368 Score = 406 bits (205), Expect = e-110 Identities = 352/401 (87%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 |||||||||||||| || |||||||||||||||||||| || ||||||||||| |||||| Sbjct: 787 ggtgcctggcatccagccagggtgtcctacactgttgcccgtgctggtcagaacggatac 846 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || |||||||||||||||||||| ||||||||||||||| ||| ||||| | Sbjct: 847 caccaccgcactgagatgaacaagaaggtttacaagattggcaagtctggtcaggagtct 906 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 |||| |||| || |||||||||||||| |||||||||||||| || ||||| |||||| Sbjct: 907 catgcggcctgcaccgagttcgacaggactgagaaggacatcaccccgatgggcggcttc 966 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 || ||||| ||||||||||||| ||||||||| ||||||||||| ||||| ||||| || Sbjct: 967 ccgcactacggtgtggtgaagggcgactacctcatgatcaagggttgctgcgtcggtccg 1026 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | || || |||||| ||||||| ||||||||||||||||| || ||||| ||| Sbjct: 1027 aagaagagagtcgtcaccctccgccagtcgctgctgaagcagacctcgcggctcgccctg 1086 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| |||||||||| |||||||| |||||||| || |||||| Sbjct: 1087 gaggagatcaagctcaagttcatcgacacctcgtccaagttcgggcacggtcgcttccag 1146 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggc 413 ||||||||||||||||||||||||| |||||||||||||| Sbjct: 1147 accaccgacgagaagcagaggttcttcggcaagctcaaggc 1187
>gb|AY111327.1| Zea mays CL1488_-4 mRNA sequence Length = 615 Score = 398 bits (201), Expect = e-108 Identities = 358/412 (86%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 35 ggtgcatggcatcctgctagggtgtcgtacactgttgctcgtgctggtcagaacggatac 94 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 || || || |||||||||||||||||||| |||||||||||||||| |||||||||| | Sbjct: 95 catcaccgcactgagatgaacaagaaggtttacaagattggcaaggccggacaggaaagc 154 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 155 catgacgcctcaactgagtttgacaggaccgagaaggacatcactcccatgggtggtttn 214 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 |||| ||| | | |||| ||||||||||||||||||||| ||||| ||||| || Sbjct: 215 nnnnactacggtatcatcaagggcgactacctgatgatcaagggttgctgcgtcggcccc 274 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 ||||| | |||||||| ||| ||||||| |||||||||||||| ||||| | || ||| Sbjct: 275 aagaaaagggtggtgactctccgccagtctctgctgaagcagacgtctcggttggccctg 334 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| |||||||||| ||||||||||| || || || |||||| Sbjct: 335 gaggagatcaagctcaagttcatcgacacctcgtccaagtttggacatgggcgcttccag 394 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggcttgagctgctg 424 |||| ||||||||||||||||||| ||||||||||||||| |||| ||||| Sbjct: 395 tccacagacgagaagcagaggttctttggcaagctcaaggcctgagttgctg 446
>gb|AY347531.1| Triticum aestivum cultivar Falat ribosomal protein L3 (RPL3) mRNA, RPL3-A2 allele, complete cds Length = 1170 Score = 394 bits (199), Expect = e-106 Identities = 352/403 (87%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 766 ggtgcctggcatcctgctagggtttcctacactgttgctcgtgctggtcagaatggttac 825 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || || ||||||||||| ||| | |||||||| |||||| ||||||||| | Sbjct: 826 caccaccgcacagagatgaacaaaaagatttacaagatgggcaagtctggacaggagtct 885 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 || || |||| |||||||| |||||||| |||||||||||||| || |||||||||||| Sbjct: 886 cacgaggcctgcactgagtttgacaggactgagaaggacatcaccccgatgggtggcttc 945 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 |||||||||||||||||||||| |||||||| ||||||||||| |||||||| || || Sbjct: 946 cctcactatggtgtggtgaagggtgactacctcatgatcaagggctgctgtgtgggcccc 1005 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | |||||||||||| ||||||||||| | |||||||| || || | || || Sbjct: 1006 aagaagagagtggtgaccctccgccagtccctgttaaagcagacgtcgcggttggccctt 1065 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| |||||||||| || ||||||||||| ||||| |||||| Sbjct: 1066 gaggagatcaagctcaagttcatcgacacctcatcaaagtttgggcatggccggttccag 1125 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggctt 415 ||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 1126 accaccgacgagaagcagaagttctacggcaagctcaaggctt 1168
>gb|AY343330.1| Triticum aestivum ribosomal protein L3 (RPL3) mRNA, RPL3-A1 allele, complete cds Length = 1170 Score = 394 bits (199), Expect = e-106 Identities = 352/403 (87%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 766 ggtgcctggcatcctgctagggtttcctacactgttgctcgtgctggtcagaatggttac 825 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || || ||||||||||| ||| | |||||||| |||||| ||||||||| | Sbjct: 826 caccaccgcacagagatgaacaaaaagatttacaagatgggcaagtctggacaggagtct 885 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 || || |||| |||||||| |||||||| |||||||||||||| || |||||||||||| Sbjct: 886 cacgaggcctgcactgagtttgacaggactgagaaggacatcaccccgatgggtggcttc 945 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 |||||||||||||||||||||| |||||||| ||||||||||| |||||||| || || Sbjct: 946 cctcactatggtgtggtgaagggtgactacctcatgatcaagggctgctgtgtgggcccc 1005 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | |||||||||||| ||||||||||| ||||||||||||| || | || || Sbjct: 1006 aagaagagagtggtgaccctccgccagtccctgttgaagcagacctcgcggttggccctt 1065 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| |||||||||| |||||||| ||||| ||||| |||||| Sbjct: 1066 gaggagatcaagctcaagttcatcgacacctcatccaagttcgggcatggccggttccag 1125 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggctt 415 ||||| ||||||||||||| |||||| |||| ||||||||||| Sbjct: 1126 accactgacgagaagcagaagttctacggcaggctcaaggctt 1168
>gb|AY343328.1| Triticum aestivum ribosomal protein L3 (RPL3) mRNA, RPL3-A2 allele, complete cds Length = 1170 Score = 394 bits (199), Expect = e-106 Identities = 352/403 (87%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 766 ggtgcctggcatcctgctagggtttcctacactgttgctcgtgctggtcagaatggttac 825 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || || ||||||||||| ||| | |||||||| |||||| ||||||||| | Sbjct: 826 caccaccgcacagagatgaacaaaaagatttacaagatgggcaagtctggacaggagtct 885 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 || || |||| |||||||| |||||||| |||||||||||||| || |||||||||||| Sbjct: 886 cacgaggcctgcactgagtttgacaggactgagaaggacatcaccccgatgggtggcttc 945 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 |||||||||||||||||||||| |||||||| ||||||||||| |||||||| || || Sbjct: 946 cctcactatggtgtggtgaagggtgactacctcatgatcaagggctgctgtgtgggcccc 1005 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | |||||||||||| ||||||||||| | |||||||| || || | || || Sbjct: 1006 aagaagagagtggtgaccctccgccagtccctgttaaagcagacgtcgcggttggccctt 1065 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| |||||||||| || ||||||||||| ||||| |||||| Sbjct: 1066 gaggagatcaagctcaagttcatcgacacctcatcaaagtttgggcatggccggttccag 1125 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggctt 415 ||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 1126 accaccgacgagaagcagaagttctacggcaagctcaaggctt 1168
>gb|AY343327.1| Triticum aestivum ribosomal protein L3 (RPL3) mRNA, RPL3-A1 allele, complete cds Length = 1170 Score = 394 bits (199), Expect = e-106 Identities = 352/403 (87%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 766 ggtgcctggcatcctgctagggtttcctacactgttgctcgtgctggtcagaatggttac 825 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || || ||||||||||| ||| | |||||||| |||||| ||||||||| | Sbjct: 826 caccaccgcacagagatgaacaaaaagatttacaagatgggcaagtctggacaggagtct 885 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 || || |||| |||||||| |||||||| |||||||||||||| || |||||||||||| Sbjct: 886 cacgaggcctgcactgagtttgacaggactgagaaggacatcaccccgatgggtggcttc 945 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 |||||||||||||||||||||| |||||||| ||||||||||| |||||||| || || Sbjct: 946 cctcactatggtgtggtgaagggtgactacctcatgatcaagggctgctgtgtgggcccc 1005 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | |||||||||||| ||||||||||| ||||||||||||| || | || || Sbjct: 1006 aagaagagagtggtgaccctccgccagtccctgttgaagcagacctcgcggttggccctt 1065 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| |||||||||| |||||||| ||||| ||||| |||||| Sbjct: 1066 gaggagatcaagctcaagttcatcgacacctcatccaagttcgggcatggccggttccag 1125 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggctt 415 ||||| ||||||||||||| |||||| |||| ||||||||||| Sbjct: 1126 accactgacgagaagcagaagttctacggcaggctcaaggctt 1168
>gb|AY103608.1| Zea mays PCO139614 mRNA sequence Length = 1714 Score = 385 bits (194), Expect = e-103 Identities = 359/414 (86%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||| |||||||| ||||| || ||||| || |||||||| ||||| ||| Sbjct: 891 ggtgcatggcatccggctagggtctcctatacggttgcccgtgctggtcaaaatgggtac 950 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || |||||||||||||||||||| |||||||| ||||||| |||||| || ||| Sbjct: 951 caccaccgcactgagatgaacaagaaggtttacaagatcggcaaggctggacaagagacc 1010 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 || |||||||| || ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 1011 cacgatgcctccacagagtttgacaggactgagaaggacatcactcccatgggtggcttc 1070 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 || || |||||| | ||||||| |||||||||||||||||||| |||||||| || ||| Sbjct: 1071 ccccattatggtatcgtgaagggtgactacctgatgatcaagggctgctgtgtgggtcca 1130 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | |||||||||||| |||||||||| ||||||||||| || || || || ||| Sbjct: 1131 aagaagagggtggtgaccctccgccagtccctcctgaagcagacttcccggctggcgctg 1190 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| ||||||| || ||||| |||||||| || || |||||| Sbjct: 1191 gaggagatcaagctcaagttcatcgacacatcgtccaaatttgggcatggtcgcttccag 1250 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggcttgagctgctgcg 426 || ||||| |||||||||||||||| ||| ||||||||||| | || ||||||| Sbjct: 1251 actaccgatgagaagcagaggttctttggtaagctcaaggcgtaaggtgctgcg 1304
>gb|AY236158.1| Oryza sativa (indica cultivar-group) ribosomal protein L3B mRNA, partial cds Length = 1035 Score = 315 bits (159), Expect = 9e-83 Identities = 258/291 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 733 ggtgcctggcatcctgctagggtttcctatactgttgctcgcgctggtcagaatgggtac 792 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || ||||||||||| |||||||| |||||||| |||||| ||| ||||||| | Sbjct: 793 caccaccgcactgagatgaataagaaggtttacaagatcggcaagtctggccaggaaagc 852 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 |||| ||||| ||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct: 853 catgctgcctgcactgaatttgacaggactgagaaggacatcactcccatgggtggcttc 912 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 |||||||| ||||| ||||||| ||||||||| ||||||||||| |||||||| || || Sbjct: 913 cctcactacggtgttgtgaagggcgactacctcatgatcaagggttgctgtgttggcccc 972 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgt 303 |||||| | || || |||||| ||||||||||||| ||||||||||||||| Sbjct: 973 aagaagagggtcgtcaccctccgccagtccctgctcaagcagacctctcgt 1023
>gb|BT017815.1| Zea mays clone EL01N0507E03.c mRNA sequence Length = 1343 Score = 305 bits (154), Expect = 9e-80 Identities = 349/414 (84%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||| |||||||| ||||| || |||||||| |||||||||||||| | | Sbjct: 734 ggtgcatggcatccggctagggtctcctatacggttgctcgtgctggtcagaatgggtcc 793 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 | || || |||||||||||||||||||| |||||||| ||||||| |||||| | ||| Sbjct: 794 cccccccgcactgagatgaacaagaaggtttacaagatcggcaaggctggacaaaagacc 853 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 | |||||||| | ||||| |||||||| |||||||||||| ||||||||||||||||| Sbjct: 854 cccgatgcctccccagagtttgacaggactgagaaggacatccctcccatgggtggcttc 913 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 || || |||||| | ||||||| |||| ||||||||||||||| |||||||| || ||| Sbjct: 914 ccccattatggtatcgtgaagggtgactccctgatgatcaagggctgctgtgtgggtcca 973 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 || || | |||||||||||| ||||||||| ||||||||||| || || || || || Sbjct: 974 aaaaaaagggtggtgaccctcccccagtccctcctgaagcagacttcccggctggcgttg 1033 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| ||||||| || ||||| ||||||||||| || |||||| Sbjct: 1034 gaggagatcaagctcaagttcatcgacacatcgtccaaatttgggcacggtcgcttccag 1093 Query: 373 accaccgacgagaagcagaggttctatggcaagctcaaggcttgagctgctgcg 426 || ||||| |||||||||||||| | |||||||| |||||| | || ||||||| Sbjct: 1094 actaccgatgagaagcagaggttttttggcaagcccaaggcgtaaggtgctgcg 1147
>gb|BT016883.1| Zea mays clone Contig716 mRNA sequence Length = 569 Score = 301 bits (152), Expect = 1e-78 Identities = 293/340 (86%) Strand = Plus / Minus Query: 87 gatgaacaagaaggtgtacaagattggcaaggttggacaggaaacccatgatgcctctac 146 ||||||||||||||| |||||||| ||||||| |||||| || ||||| |||||||| | Sbjct: 569 gatgaacaagaaggtctacaagatcggcaaggctggacaagagacccacgatgcctcccc 510 Query: 147 tgagttcgacaggaccgagaaggacatcactcccatgggtggcttccctcactatggtgt 206 ||||| |||||| |||||||||||||| ||||||||||||||||||| | ||||||| | Sbjct: 509 agagtttgacaggcccgagaaggacatccctcccatgggtggcttccccccctatggtat 450 Query: 207 ggtgaaggccgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggt 266 ||||||| |||| |||||||||||||||||| ||||| || ||||||||| | ||||| Sbjct: 449 cgtgaagggtgactccctgatgatcaagggatgttgtgtgggtccaaagaagagggtggt 390 Query: 267 gaccctctgccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagct 326 ||||||| |||||||||| ||||||||||| || || || || |||||||| |||||||| Sbjct: 389 gaccctccgccagtccctcctgaagcagacttcccggctggcgctggaggagatcaagct 330 Query: 327 caagtttgtcgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaa 386 |||||| ||||||| || ||||| ||||||||||| || |||||||| ||||| ||||| Sbjct: 329 caagttcatcgacacatcgtccaaatttgggcacggtcgcttccagactaccgatgagaa 270 Query: 387 gcagaggttctatggcaagctcaaggcttgagctgctgcg 426 ||||||||| | ||| ||||||||||| | || ||||||| Sbjct: 269 gcagaggttttttggtaagctcaaggcgtaaggtgctgcg 230
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 285 bits (144), Expect = 8e-74 Identities = 231/260 (88%) Strand = Plus / Minus Query: 156 caggaccgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaaggc 215 |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 38046 caggactgagaaggacatcactcccatgggtggcttccctcactacggtgttgtgaaggg 37987 Query: 216 cgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctg 275 ||||||||| ||||||||||| |||||||| || || |||||| | || || |||||| | Sbjct: 37986 cgactacctcatgatcaagggttgctgtgttggccccaagaagagggtcgtcaccctccg 37927 Query: 276 ccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagctcaagtttgt 335 |||||||||||| ||||||||||||||| | || || ||||| |||||||||||||| | Sbjct: 37926 ccagtccctgctcaagcagacctctcgtttggcgctcgaggagatcaagctcaagttcat 37867 Query: 336 cgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaagcagaggtt 395 ||||||||| |||||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 37866 cgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaaacagaggtt 37807 Query: 396 ctatggcaagctcaaggctt 415 || |||||||||||||||| Sbjct: 37806 cttcggcaagctcaaggctt 37787 Score = 149 bits (75), Expect = 1e-32 Identities = 129/147 (87%) Strand = Plus / Minus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 38315 ggtgcctggcatcctgctagggtttcctatactgttgctcgcgctggtcagaatgggtac 38256 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || ||||||||||| |||||||| |||||||| |||||| ||| ||||||| | Sbjct: 38255 caccaccgcactgagatgaataagaaggtttacaagatcggcaagtctggccaggaaagc 38196 Query: 133 catgatgcctctactgagttcgacagg 159 |||| ||||| ||||| || |||||| Sbjct: 38195 catgctgcctgcactgaatttgacagg 38169
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 285 bits (144), Expect = 8e-74 Identities = 231/260 (88%) Strand = Plus / Minus Query: 156 caggaccgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaaggc 215 |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 137347 caggactgagaaggacatcactcccatgggtggcttccctcactacggtgttgtgaaggg 137288 Query: 216 cgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctg 275 ||||||||| ||||||||||| |||||||| || || |||||| | || || |||||| | Sbjct: 137287 cgactacctcatgatcaagggttgctgtgttggccccaagaagagggtcgtcaccctccg 137228 Query: 276 ccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagctcaagtttgt 335 |||||||||||| ||||||||||||||| | || || ||||| |||||||||||||| | Sbjct: 137227 ccagtccctgctcaagcagacctctcgtttggcgctcgaggagatcaagctcaagttcat 137168 Query: 336 cgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaagcagaggtt 395 ||||||||| |||||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 137167 cgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaaacagaggtt 137108 Query: 396 ctatggcaagctcaaggctt 415 || |||||||||||||||| Sbjct: 137107 cttcggcaagctcaaggctt 137088 Score = 149 bits (75), Expect = 1e-32 Identities = 129/147 (87%) Strand = Plus / Minus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 137616 ggtgcctggcatcctgctagggtttcctatactgttgctcgcgctggtcagaatgggtac 137557 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || ||||||||||| |||||||| |||||||| |||||| ||| ||||||| | Sbjct: 137556 caccaccgcactgagatgaataagaaggtttacaagatcggcaagtctggccaggaaagc 137497 Query: 133 catgatgcctctactgagttcgacagg 159 |||| ||||| ||||| || |||||| Sbjct: 137496 catgctgcctgcactgaatttgacagg 137470
>gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome 11 genomic sequence Length = 42748 Score = 285 bits (144), Expect = 8e-74 Identities = 231/260 (88%) Strand = Plus / Plus Query: 156 caggaccgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaaggc 215 |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 31154 caggactgagaaggacatcactcccatgggtggcttccctcactacggtgttgtgaaggg 31213 Query: 216 cgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctg 275 ||||||||| ||||||||||| |||||||| || || |||||| | || || |||||| | Sbjct: 31214 cgactacctcatgatcaagggttgctgtgttggccccaagaagagggtcgtcaccctccg 31273 Query: 276 ccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagctcaagtttgt 335 |||||||||||| ||||||||||||||| | || || ||||| |||||||||||||| | Sbjct: 31274 ccagtccctgctcaagcagacctctcgtttggcgctcgaggagatcaagctcaagttcat 31333 Query: 336 cgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaagcagaggtt 395 ||||||||| |||||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 31334 cgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaaacagaggtt 31393 Query: 396 ctatggcaagctcaaggctt 415 || |||||||||||||||| Sbjct: 31394 cttcggcaagctcaaggctt 31413 Score = 149 bits (75), Expect = 1e-32 Identities = 129/147 (87%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 30885 ggtgcctggcatcctgctagggtttcctatactgttgctcgcgctggtcagaatgggtac 30944 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || ||||||||||| |||||||| |||||||| |||||| ||| ||||||| | Sbjct: 30945 caccaccgcactgagatgaataagaaggtttacaagatcggcaagtctggccaggaaagc 31004 Query: 133 catgatgcctctactgagttcgacagg 159 |||| ||||| ||||| || |||||| Sbjct: 31005 catgctgcctgcactgaatttgacagg 31031
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 285 bits (144), Expect = 8e-74 Identities = 231/260 (88%) Strand = Plus / Plus Query: 156 caggaccgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaaggc 215 |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 3276939 caggactgagaaggacatcactcccatgggtggcttccctcactacggtgttgtgaaggg 3276998 Query: 216 cgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctg 275 ||||||||| ||||||||||| |||||||| || || |||||| | || || |||||| | Sbjct: 3276999 cgactacctcatgatcaagggttgctgtgttggccccaagaagagggtcgtcaccctccg 3277058 Query: 276 ccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagctcaagtttgt 335 |||||||||||| ||||||||||||||| | || || ||||| |||||||||||||| | Sbjct: 3277059 ccagtccctgctcaagcagacctctcgtttggcgctcgaggagatcaagctcaagttcat 3277118 Query: 336 cgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaagcagaggtt 395 ||||||||| |||||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 3277119 cgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaaacagaggtt 3277178 Query: 396 ctatggcaagctcaaggctt 415 || |||||||||||||||| Sbjct: 3277179 cttcggcaagctcaaggctt 3277198 Score = 149 bits (75), Expect = 1e-32 Identities = 129/147 (87%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 3276670 ggtgcctggcatcctgctagggtttcctatactgttgctcgcgctggtcagaatgggtac 3276729 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || ||||||||||| |||||||| |||||||| |||||| ||| ||||||| | Sbjct: 3276730 caccaccgcactgagatgaataagaaggtttacaagatcggcaagtctggccaggaaagc 3276789 Query: 133 catgatgcctctactgagttcgacagg 159 |||| ||||| ||||| || |||||| Sbjct: 3276790 catgctgcctgcactgaatttgacagg 3276816
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 285 bits (144), Expect = 8e-74 Identities = 231/260 (88%) Strand = Plus / Plus Query: 156 caggaccgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaaggc 215 |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 3285652 caggactgagaaggacatcactcccatgggtggcttccctcactacggtgttgtgaaggg 3285711 Query: 216 cgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctg 275 ||||||||| ||||||||||| |||||||| || || |||||| | || || |||||| | Sbjct: 3285712 cgactacctcatgatcaagggttgctgtgttggccccaagaagagggtcgtcaccctccg 3285771 Query: 276 ccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagctcaagtttgt 335 |||||||||||| ||||||||||||||| | || || ||||| |||||||||||||| | Sbjct: 3285772 ccagtccctgctcaagcagacctctcgtttggcgctcgaggagatcaagctcaagttcat 3285831 Query: 336 cgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaagcagaggtt 395 ||||||||| |||||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 3285832 cgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaaacagaggtt 3285891 Query: 396 ctatggcaagctcaaggctt 415 || |||||||||||||||| Sbjct: 3285892 cttcggcaagctcaaggctt 3285911 Score = 149 bits (75), Expect = 1e-32 Identities = 129/147 (87%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct: 3285383 ggtgcctggcatcctgctagggtttcctatactgttgctcgcgctggtcagaatgggtac 3285442 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || ||||||||||| |||||||| |||||||| |||||| ||| ||||||| | Sbjct: 3285443 caccaccgcactgagatgaataagaaggtttacaagatcggcaagtctggccaggaaagc 3285502 Query: 133 catgatgcctctactgagttcgacagg 159 |||| ||||| ||||| || |||||| Sbjct: 3285503 catgctgcctgcactgaatttgacagg 3285529
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 274 bits (138), Expect = 3e-70 Identities = 228/258 (88%) Strand = Plus / Plus Query: 156 caggaccgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaaggc 215 |||||| |||||||||||||| || ||||| |||||||| ||||| ||||||||||||| Sbjct: 3430320 caggactgagaaggacatcaccccgatgggcggcttcccgcactacggtgtggtgaaggg 3430379 Query: 216 cgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctg 275 ||||||||| ||||||||||| ||||| ||||| || |||||| | || || |||||| | Sbjct: 3430380 cgactacctcatgatcaagggttgctgcgtcggtccgaagaagagagtcgtcaccctccg 3430439 Query: 276 ccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagctcaagtttgt 335 |||||| ||||||||||||||||| || ||||| |||||||| |||||||||||||| | Sbjct: 3430440 ccagtcgctgctgaagcagacctcgcggctcgccctggaggagatcaagctcaagttcat 3430499 Query: 336 cgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaagcagaggtt 395 ||||||||| |||||||| |||||||| || ||||||||||||||||||||||||||||| Sbjct: 3430500 cgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaagcagaggtt 3430559 Query: 396 ctatggcaagctcaaggc 413 || |||||||||||||| Sbjct: 3430560 cttcggcaagctcaaggc 3430577 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 |||||||||||||| || |||||||||||||||||||| || ||||||||||| |||||| Sbjct: 3430085 ggtgcctggcatccagccagggtgtcctacactgttgcccgtgctggtcagaacggatac 3430144 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaag 117 ||||| || |||||||||||||||||||| ||||||||||||||| Sbjct: 3430145 caccaccgcactgagatgaacaagaaggtttacaagattggcaag 3430189
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 274 bits (138), Expect = 3e-70 Identities = 228/258 (88%) Strand = Plus / Plus Query: 156 caggaccgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaaggc 215 |||||| |||||||||||||| || ||||| |||||||| ||||| ||||||||||||| Sbjct: 3430261 caggactgagaaggacatcaccccgatgggcggcttcccgcactacggtgtggtgaaggg 3430320 Query: 216 cgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctg 275 ||||||||| ||||||||||| ||||| ||||| || |||||| | || || |||||| | Sbjct: 3430321 cgactacctcatgatcaagggttgctgcgtcggtccgaagaagagagtcgtcaccctccg 3430380 Query: 276 ccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagctcaagtttgt 335 |||||| ||||||||||||||||| || ||||| |||||||| |||||||||||||| | Sbjct: 3430381 ccagtcgctgctgaagcagacctcgcggctcgccctggaggagatcaagctcaagttcat 3430440 Query: 336 cgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaagcagaggtt 395 ||||||||| |||||||| |||||||| || ||||||||||||||||||||||||||||| Sbjct: 3430441 cgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaagcagaggtt 3430500 Query: 396 ctatggcaagctcaaggc 413 || |||||||||||||| Sbjct: 3430501 cttcggcaagctcaaggc 3430518 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 |||||||||||||| || |||||||||||||||||||| || ||||||||||| |||||| Sbjct: 3430026 ggtgcctggcatccagccagggtgtcctacactgttgcccgtgctggtcagaacggatac 3430085 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaag 117 ||||| || |||||||||||||||||||| ||||||||||||||| Sbjct: 3430086 caccaccgcactgagatgaacaagaaggtttacaagattggcaag 3430130
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 274 bits (138), Expect = 3e-70 Identities = 228/258 (88%) Strand = Plus / Minus Query: 156 caggaccgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaaggc 215 |||||| |||||||||||||| || ||||| |||||||| ||||| ||||||||||||| Sbjct: 101599 caggactgagaaggacatcaccccgatgggcggcttcccgcactacggtgtggtgaaggg 101540 Query: 216 cgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctg 275 ||||||||| ||||||||||| ||||| ||||| || |||||| | || || |||||| | Sbjct: 101539 cgactacctcatgatcaagggttgctgcgtcggtccgaagaagagagtcgtcaccctccg 101480 Query: 276 ccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagctcaagtttgt 335 |||||| ||||||||||||||||| || ||||| |||||||| |||||||||||||| | Sbjct: 101479 ccagtcgctgctgaagcagacctcgcggctcgccctggaggagatcaagctcaagttcat 101420 Query: 336 cgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaagcagaggtt 395 ||||||||| |||||||| |||||||| || ||||||||||||||||||||||||||||| Sbjct: 101419 cgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaagcagaggtt 101360 Query: 396 ctatggcaagctcaaggc 413 || |||||||||||||| Sbjct: 101359 cttcggcaagctcaaggc 101342 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Minus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 |||||||||||||| || |||||||||||||||||||| || ||||||||||| |||||| Sbjct: 101834 ggtgcctggcatccagccagggtgtcctacactgttgcccgtgctggtcagaacggatac 101775 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaag 117 ||||| || |||||||||||||||||||| ||||||||||||||| Sbjct: 101774 caccaccgcactgagatgaacaagaaggtttacaagattggcaag 101730
>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137936 Score = 274 bits (138), Expect = 3e-70 Identities = 228/258 (88%) Strand = Plus / Plus Query: 156 caggaccgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaaggc 215 |||||| |||||||||||||| || ||||| |||||||| ||||| ||||||||||||| Sbjct: 109373 caggactgagaaggacatcaccccgatgggcggcttcccgcactacggtgtggtgaaggg 109432 Query: 216 cgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctg 275 ||||||||| ||||||||||| ||||| ||||| || |||||| | || || |||||| | Sbjct: 109433 cgactacctcatgatcaagggttgctgcgtcggtccgaagaagagagtcgtcaccctccg 109492 Query: 276 ccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagctcaagtttgt 335 |||||| ||||||||||||||||| || ||||| |||||||| |||||||||||||| | Sbjct: 109493 ccagtcgctgctgaagcagacctcgcggctcgccctggaggagatcaagctcaagttcat 109552 Query: 336 cgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaagcagaggtt 395 ||||||||| |||||||| |||||||| || ||||||||||||||||||||||||||||| Sbjct: 109553 cgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaagcagaggtt 109612 Query: 396 ctatggcaagctcaaggc 413 || |||||||||||||| Sbjct: 109613 cttcggcaagctcaaggc 109630 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 |||||||||||||| || |||||||||||||||||||| || ||||||||||| |||||| Sbjct: 109138 ggtgcctggcatccagccagggtgtcctacactgttgcccgtgctggtcagaacggatac 109197 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaag 117 ||||| || |||||||||||||||||||| ||||||||||||||| Sbjct: 109198 caccaccgcactgagatgaacaagaaggtttacaagattggcaag 109242
>gb|BT016900.1| Zea mays clone Contig733 mRNA sequence Length = 707 Score = 242 bits (122), Expect = 1e-60 Identities = 218/250 (87%) Strand = Plus / Minus Query: 177 tcccatgggtggcttccctcactatggtgtggtgaaggccgactacctgatgatcaaggg 236 |||||||||||||||||| ||||||||| | ||||||| |||| ||||||||||||||| Sbjct: 707 tcccatgggtggcttcccccactatggtatcgtgaagggtgactccctgatgatcaaggg 648 Query: 237 atgctgtgtcgggccaaagaagcgtgtggtgaccctctgccagtccctgctgaagcagac 296 ||||||||| || ||||||||| | |||||||||||| |||||||||| ||||||||||| Sbjct: 647 atgctgtgtgggtccaaagaagagggtggtgaccctccgccagtccctcctgaagcagac 588 Query: 297 ctctcgtctcgcactggaggaaatcaagctcaagtttgtcgacacctcttccaagtttgg 356 || || || || |||||||| |||||||||||||| ||||||| || ||||| ||||| Sbjct: 587 ttcccggctggcgctggaggagatcaagctcaagttcatcgacacatcgtccaaatttgg 528 Query: 357 gcacggccgtttccagaccaccgacgagaagcagaggttctatggcaagctcaaggcttg 416 |||||| || |||||||| ||||| |||||||||||||||| ||| ||||||||||| | Sbjct: 527 gcacggtcgcttccagactaccgatgagaagcagaggttctttggtaagctcaaggcgta 468 Query: 417 agctgctgcg 426 || ||||||| Sbjct: 467 aggtgctgcg 458
>gb|AY846368.1| Lolium multiflorum ribosomal protein L3 (Rpl3) mRNA, partial cds Length = 399 Score = 220 bits (111), Expect = 4e-54 Identities = 147/159 (92%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||||||||||||||||||||| || ||||||||||| || |||||||||||||| ||| Sbjct: 239 ggtgcctggcatcctgctagggtttcatacactgttgcccgtgctggtcagaatggttac 298 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 ||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 299 caccaccgaactgagatgaacaagaaggtttacaagattggcaaggttggacaggaaact 358 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggac 171 |||||||||||||| ||||| |||||||| ||||||||| Sbjct: 359 catgatgcctctaccgagtttgacaggactgagaaggac 397
>gb|DQ241849.1| Solanum tuberosum clone 187E04 ribosomal protein L3-like mRNA, complete cds Length = 1434 Score = 208 bits (105), Expect = 1e-50 Identities = 318/389 (81%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 |||||||||||||||||||| || || | ||| || ||||| |||||||| ||||||||| Sbjct: 817 ggtgcctggcatcctgctagagtttcattcacagtggctcgtgctggtcaaaatggatac 876 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 || || || |||||||||||||||||||| |||||| ||||||||||||||||||| || Sbjct: 877 catcaccgtactgagatgaacaagaaggtttacaagcttggcaaggttggacaggagtcc 936 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 || ||| |||||||| |||||||| ||||| || || ||||| || ||||| || Sbjct: 937 cacactgcagtaactgagtttgacaggactgagaaagagattactcctattggtggattt 996 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 | || |||||||||||||||| || |||||| ||||||||||||||||||| || || Sbjct: 997 gcccattatggtgtggtgaaggatgattacctgttgatcaagggatgctgtgttggtcct 1056 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | || || ||||| | || |||||||| || |||||||||||| | || || Sbjct: 1057 aagaagagggttgtaaccctgcgtcaatccctgctcaaccagacctctcgtgttgctctt 1116 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| || ||||| ||||| ||||||| || || |||||||| || || || |||||| Sbjct: 1117 gaggagattaagctgaagttcatcgacacatcctcaaagtttggacatggtcgcttccag 1176 Query: 373 accaccgacgagaagcagaggttctatgg 401 |||||| | |||||||||| |||||||| Sbjct: 1177 accacccaagagaagcagaaattctatgg 1205
>gb|AY395738.1| Nicotiana tabacum ribosomal protein L3A (RPL3A) mRNA, complete cds Length = 1416 Score = 204 bits (103), Expect = 2e-49 Identities = 316/387 (81%) Strand = Plus / Plus Query: 16 gcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccac 75 |||||||| |||||||| || |||||||| ||||| || |||||||| ||||||||||| Sbjct: 822 gcctggcaccctgctagagtttcctacacagttgcccgtgctggtcaaaatggataccat 881 Query: 76 catcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacccat 135 || || || ||||||||||||||||| ||||| | || |||| ||| || || ||||| Sbjct: 882 caccgtaccgagatgaacaagaaggtttacaaactagggaaggctggccaagagtcccat 941 Query: 136 gatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttccct 195 | ||| ||||| || |||||||||||||| ||||| |||||||||||||| || || Sbjct: 942 gctgctgtaactgattttgacaggaccgagaaagacattactcccatgggtggatttccc 1001 Query: 196 cactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggccaaag 255 || |||||||||||||||| || |||||| ||||||||||||||||||| || || ||| Sbjct: 1002 cattatggtgtggtgaaggatgattacctgttgatcaagggatgctgtgttggtcctaag 1061 Query: 256 aagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactggag 315 ||| | || || ||||| | ||||||||||| || |||||||||||| |||| || ||| Sbjct: 1062 aagagggttgtaacccttcgtcagtccctgctcaaccagacctctcgtgtcgctcttgag 1121 Query: 316 gaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccagacc 375 || || ||||| ||||| |||| || || || |||||||| || || || ||||||||| Sbjct: 1122 gagattaagctgaagttcatcgatacatcctcaaagtttggacatggtcgcttccagacc 1181 Query: 376 accgacgagaagcagaggttctatggc 402 || | |||||||||| ||||||||| Sbjct: 1182 actcaagagaagcagaaattctatggc 1208
>gb|AY456411.1| Lycopersicon esculentum ribosomal protein L3 (RPL3) mRNA, complete cds Length = 1387 Score = 192 bits (97), Expect = 9e-46 Identities = 316/389 (81%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 |||||||||||||||||||| || || | ||| || ||||| |||||||| ||||||||| Sbjct: 800 ggtgcctggcatcctgctagagtttcattcacagtggctcgtgctggtcaaaatggatac 859 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 || || || |||||||||||||||||||| |||||| | ||||||||||||||||| || Sbjct: 860 catcaccgtactgagatgaacaagaaggtttacaagctcggcaaggttggacaggagtcc 919 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 || |||| |||||||| |||||||| ||||| ||||| || || || ||||| || Sbjct: 920 cacactgccctaactgagtttgacaggactgagaaagacattacacctattggtggattt 979 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 || || |||||||||||||||| || |||||| ||||||||||||||||||| || | Sbjct: 980 ccccattatggtgtggtgaaggaggattacctgttgatcaagggatgctgtgttggtact 1039 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | || || || || | || ||||| || || ||||| |||||| | || || Sbjct: 1040 aagaagagggttgtaactctgcgtcaatcccttctcaaccagacttctcgtgttgctctt 1099 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| || ||||| ||||| ||||||| || ||||||||||| || || || |||||| Sbjct: 1100 gaggagattaagctgaagttcatcgacacatcctccaagtttggacatggtcgcttccag 1159 Query: 373 accaccgacgagaagcagaggttctatgg 401 |||||| | |||||||||| |||||||| Sbjct: 1160 accacccaagagaagcagaaattctatgg 1188
>emb|Y14339.1|LEY14339 Lycopersicon esculentum mRNA for proteasome, alpha subunit Length = 1686 Score = 192 bits (97), Expect = 9e-46 Identities = 316/389 (81%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 |||||||||||||||||||| || || | ||| || ||||| |||||||| ||||||||| Sbjct: 1075 ggtgcctggcatcctgctagagtttcattcacagtggctcgtgctggtcaaaatggatac 1134 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 || || || |||||||||||||||||||| |||||| | ||||||||||||||||| || Sbjct: 1135 catcaccgtactgagatgaacaagaaggtttacaagctcggcaaggttggacaggagtcc 1194 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 || |||| |||||||| |||||||| ||||| ||||| || || || ||||| || Sbjct: 1195 cacactgccctaactgagtttgacaggactgagaaagacattacacctattggtggattt 1254 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 || || |||||||||||||||| || |||||| ||||||||||||||||||| || | Sbjct: 1255 ccccattatggtgtggtgaaggaggattacctgttgatcaagggatgctgtgttggtact 1314 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 |||||| | || || || || | || ||||| || || ||||| |||||| | || || Sbjct: 1315 aagaagagggttgtaactctgcgtcaatcccttctcaaccagacttctcgtgttgctctt 1374 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| || ||||| ||||| ||||||| || ||||||||||| || || || |||||| Sbjct: 1375 gaggagattaagctgaagttcatcgacacatcctccaagtttggacatggtcgcttccag 1434 Query: 373 accaccgacgagaagcagaggttctatgg 401 |||||| | |||||||||| |||||||| Sbjct: 1435 accacccaagagaagcagaaattctatgg 1463
>emb|AJ248327.1|MSA248327 Medicago sativa subsp. X varia mRNA for L3 Ribosomal protein Length = 1201 Score = 159 bits (80), Expect = 1e-35 Identities = 287/356 (80%) Strand = Plus / Plus Query: 19 tggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccaccat 78 |||||||||||||| || || | ||||||||| | |||||||| || |||||||| || Sbjct: 793 tggcatcctgctagagtttctttcactgttgccagagctggtcaaaacggataccatcac 852 Query: 79 cggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacccatgat 138 | |||||| |||||||||| | |||||| | ||||| |||||| |||| |||||||| Sbjct: 853 agaactgagctgaacaagaaaatttacaagctcggcaaagttggagaggagacccatgac 912 Query: 139 gcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttccctcac 198 ||| ||||||||||| ||||| ||||| ||||| || || |||||||| ||||| ||| Sbjct: 913 gcccagactgagttcgataggactgagaaagacattacacctatgggtggtttcccacac 972 Query: 199 tatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggccaaagaag 258 || ||| | || |||| || | ||||||||||||||| ||||||| || || |||||| Sbjct: 973 tacggtattgtcaaggaggattttctgatgatcaagggaggctgtgttggtcccaagaag 1032 Query: 259 cgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactggaggaa 318 | || | || || |||||||||| || |||||||| |||||||| || || ||||| Sbjct: 1033 agggttattactctgcgccagtcccttcttaagcagacttctcgtcttgctcttgaggat 1092 Query: 319 atcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccagac 374 ||||| ||||||||| |||| ||||||| ||||||||| || || ||||||||||| Sbjct: 1093 atcaaactcaagtttatcgatacctctttcaagtttggacatggtcgtttccagac 1148
>gb|AY395739.1| Nicotiana tabacum ribosomal protein L3B (RPL3B) mRNA, complete cds Length = 1487 Score = 147 bits (74), Expect = 5e-32 Identities = 290/362 (80%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||| || ||||||| |||||||| ||| ||||||| |||||||| || Sbjct: 894 ggtgcttggcatccagcacgggtgtcatacactgtagctagggctgggcagaatggttat 953 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 |||||||| |||||| |||||||||| || |||| | | ||||||| ||| ||||| | Sbjct: 954 caccatcgcactgagctgaacaagaaagtctacaggctgggcaaggctggtcaggagtct 1013 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 ||| ||| |||||||| |||||||| |||||||| ||||| || |||||||| || Sbjct: 1014 cattctgcaataactgagtttgacaggactgagaaggatatcacgccaatgggtggattt 1073 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 ||||| |||||| | ||||| | |||| ||| |||| ||||| |||||||| || ||| Sbjct: 1074 cctcattatggtattgtgaaagaagactttctgttgattaagggctgctgtgttggacca 1133 Query: 253 aagaagcgtgtggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactg 312 ||||||||||| ||||| || | ||||| ||| |||| ||||| ||| | | ||| || Sbjct: 1134 aagaagcgtgttgtgactctgaggcagtctctgttgaatcagacatctagggttgcattg 1193 Query: 313 gaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccag 372 ||||| |||||||||||||| | ||||| || ||||||||||| || || || |||||| Sbjct: 1194 gaggagatcaagctcaagttcattgacacatcctccaagtttggccatggacgcttccag 1253 Query: 373 ac 374 || Sbjct: 1254 ac 1255
>gb|AY389725.1| Hyacinthus orientalis ribosomal protein L3 mRNA, partial cds Length = 875 Score = 135 bits (68), Expect = 2e-28 Identities = 192/232 (82%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 144 tactgagttcgacaggaccgagaaggacatcactcccatgggtggcttccctcactatgg 203 ||||||||| || ||||| |||||||| |||||||| ||||| || ||||| || ||||| Sbjct: 524 tactgagtttgataggactgagaaggatatcactccgatgggagggttcccgcattatgg 583 Query: 204 tgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgt 263 ||||||||| | |||||| | ||||||| || |||||||| || || |||||| | || Sbjct: 584 tgtggtgaacgatgactacattctgatcaacggttgctgtgttggccccaagaagagggt 643 Query: 264 ggtgaccctctgccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaa 323 ||| || || ||||||||||||||||||||||||| || | || |||||||||||||| Sbjct: 644 ggtcacgcttcgccagtccctgctgaagcagacctcccgcttggctctggaggaaatcaa 703 Query: 324 gctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccagacc 375 ||||||||| ||||||| || ||||| |||| || ||||| ||||||||| Sbjct: 704 gctcaagttcatcgacacatcatccaa-cttggtcatggccgcttccagacc 754 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| ||||||||||| ||||| || ||||||||||| || ||||| |||||||||||| Sbjct: 393 ggtgcttggcatcctgccagggtctcttacactgttgcccgcgctgggcagaatggatac 452 Query: 73 caccatcggactgagatgaacaa 95 ||||| || |||||||||||||| Sbjct: 453 caccaccgcactgagatgaacaa 475
>dbj|AB008848.1| Cucumis sativus Csf-3 mRNA, complete cds Length = 911 Score = 131 bits (66), Expect = 3e-27 Identities = 201/246 (81%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| ||||| | ||||||||| ||||||||||||| || ||| Sbjct: 343 ggtgcatggcatcctgctagagtgtcattcactgttgccagggctggtcagaacggttac 402 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 || || || ||||| |||||||| ||||| ||||| ||||| ||| || |||||| | Sbjct: 403 catcaccgaactgaaatgaacaaaaaggtctacaaaattggaaagacggggcaggaatcg 462 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 || ||| |||||| ||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 463 cacactgctattactgaattcgacaggactgagaaggacattactcccatgggtggtttc 522 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 |||||||| ||| | |||||| |||||| ||||||| |||||| | ||||| || || Sbjct: 523 cctcactacggtatcgtgaagagtgactacttgatgattaagggaggttgtgttggaccc 582 Query: 253 aagaag 258 |||||| Sbjct: 583 aagaag 588
>gb|AC150978.15| Medicago truncatula clone mth2-66m17, complete sequence Length = 125121 Score = 111 bits (56), Expect = 3e-21 Identities = 179/220 (81%) Strand = Plus / Plus Query: 155 acaggaccgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaagg 214 ||||||| ||||| ||||| || || |||||||| ||||| ||||| ||| | || |||| Sbjct: 9104 acaggactgagaaagacattacacctatgggtggtttcccacactacggtattgtcaagg 9163 Query: 215 ccgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgaccctct 274 || | ||||||||||||||| ||||||| || || |||||| | || | || || Sbjct: 9164 aggattttctgatgatcaagggaggctgtgttggtcccaagaagagggttattactctgc 9223 Query: 275 gccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagctcaagtttg 334 |||||||||| || |||||||| |||||||| || || ||||| ||||| ||||||||| Sbjct: 9224 gccagtcccttcttaagcagacttctcgtcttgctcttgaggatatcaaactcaagttta 9283 Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagac 374 |||| ||||||||||||||||| || || ||||||||||| Sbjct: 9284 tcgatacctcttccaagtttggacatggtcgtttccagac 9323 Score = 69.9 bits (35), Expect = 9e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 19 tggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccaccat 78 |||||||||||||| || || | ||||||||| | ||||||||||| |||||||| || Sbjct: 8787 tggcatcctgctagagtttctttcactgttgccagagctggtcagaacggataccatcac 8846 Query: 79 cggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacccatga 137 | |||||| |||||||||| | |||||| | ||||| |||||| |||| |||||||| Sbjct: 8847 agaactgagctgaacaagaaaatttacaagctcggcaaagttggagaggagacccatga 8905
>gb|AC125473.12| Medicago truncatula clone mth2-8j13, complete sequence Length = 103966 Score = 111 bits (56), Expect = 3e-21 Identities = 179/220 (81%) Strand = Plus / Minus Query: 155 acaggaccgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaagg 214 ||||||| ||||| ||||| || || |||||||| ||||| ||||| ||| | || |||| Sbjct: 255 acaggactgagaaagacattacacctatgggtggtttcccacactacggtattgtcaagg 196 Query: 215 ccgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgaccctct 274 || | ||||||||||||||| ||||||| || || |||||| | || | || || Sbjct: 195 aggattttctgatgatcaagggaggctgtgttggtcccaagaagagggttattactctgc 136 Query: 275 gccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagctcaagtttg 334 |||||||||| || |||||||| |||||||| || || ||||| ||||| ||||||||| Sbjct: 135 gccagtcccttcttaagcagacttctcgtcttgctcttgaggatatcaaactcaagttta 76 Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagac 374 |||| ||||||||||||||||| || || ||||||||||| Sbjct: 75 tcgatacctcttccaagtttggacatggtcgtttccagac 36 Score = 69.9 bits (35), Expect = 9e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 19 tggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccaccat 78 |||||||||||||| || || | ||||||||| | ||||||||||| |||||||| || Sbjct: 572 tggcatcctgctagagtttctttcactgttgccagagctggtcagaacggataccatcac 513 Query: 79 cggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacccatga 137 | |||||| |||||||||| | |||||| | ||||| |||||| |||| |||||||| Sbjct: 512 agaactgagctgaacaagaaaatttacaagctcggcaaagttggagaggagacccatga 454
>gb|AC126014.6| Medicago truncatula clone mth2-18j5, complete sequence Length = 113200 Score = 111 bits (56), Expect = 3e-21 Identities = 179/220 (81%) Strand = Plus / Plus Query: 155 acaggaccgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaagg 214 ||||||| ||||| ||||| || || |||||||| ||||| ||||| ||| | || |||| Sbjct: 99384 acaggactgagaaagacattacacctatgggtggtttcccacactacggtattgtcaagg 99443 Query: 215 ccgactacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgaccctct 274 || | ||||||||||||||| ||||||| || || |||||| | || | || || Sbjct: 99444 aggattttctgatgatcaagggaggctgtgttggtcccaagaagagggttattactctgc 99503 Query: 275 gccagtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagctcaagtttg 334 |||||||||| || |||||||| |||||||| || || ||||| ||||| ||||||||| Sbjct: 99504 gccagtcccttcttaagcagacttctcgtcttgctcttgaggatatcaaactcaagttta 99563 Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagac 374 |||| ||||||||||||||||| || || ||||||||||| Sbjct: 99564 tcgatacctcttccaagtttggacatggtcgtttccagac 99603 Score = 69.9 bits (35), Expect = 9e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 19 tggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccaccat 78 |||||||||||||| || || | ||||||||| | ||||||||||| |||||||| || Sbjct: 99067 tggcatcctgctagagtttctttcactgttgccagagctggtcagaacggataccatcac 99126 Query: 79 cggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacccatga 137 | |||||| |||||||||| | |||||| | ||||| |||||| |||| |||||||| Sbjct: 99127 agaactgagctgaacaagaaaatttacaagctcggcaaagttggagaggagacccatga 99185
>gb|AY089000.1| Arabidopsis thaliana clone 14534 mRNA, complete sequence Length = 1389 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 826 ggtgcgtggcatcctgctagagtgtcctacactgttgctagggctggtcagaacggttac 885 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttgg 122 || || || |||||| | ||||||||| | |||| | | ||||||||||| Sbjct: 886 catcaccgtactgagcttaacaagaagatttacaggttgggcaaggttgg 935
>ref|NM_001036069.1| Arabidopsis thaliana ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome AT1G43170 (ARP1) transcript variant AT1G43170.3 mRNA, complete cds Length = 1447 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 804 ggtgcgtggcatcctgctagagtgtcctacactgttgctagggctggtcagaacggttac 863 Query: 73 caccatcggactgagatgaacaagaag 99 || || || |||||| | ||||||||| Sbjct: 864 catcaccgtactgagcttaacaagaag 890
>ref|NM_202237.1| Arabidopsis thaliana ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome AT1G43170 (ARP1) transcript variant AT1G43170.2 mRNA, complete cds Length = 1449 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 806 ggtgcgtggcatcctgctagagtgtcctacactgttgctagggctggtcagaacggttac 865 Query: 73 caccatcggactgagatgaacaagaag 99 || || || |||||| | ||||||||| Sbjct: 866 catcaccgtactgagcttaacaagaag 892
>ref|NM_103469.2| Arabidopsis thaliana ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome AT1G43170 (ARP1) transcript variant AT1G43170.1 mRNA, complete cds Length = 1483 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 840 ggtgcgtggcatcctgctagagtgtcctacactgttgctagggctggtcagaacggttac 899 Query: 73 caccatcggactgagatgaacaagaag 99 || || || |||||| | ||||||||| Sbjct: 900 catcaccgtactgagcttaacaagaag 926
>gb|AC005687.1| Arabidopsis thaliana BAC F1I21 from chromosome 1, near 59 cM, complete sequence Length = 129271 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 40129 ggtgcgtggcatcctgctagagtgtcctacactgttgctagggctggtcagaacggttac 40188 Query: 73 caccatcggactgagatgaacaagaag 99 || || || |||||| | ||||||||| Sbjct: 40189 catcaccgtactgagcttaacaagaag 40215
>gb|BT000756.1| Arabidopsis thaliana clone RAFL09-59-D03 (R18985) putative ribosomal protein (At1g43170) mRNA, complete cds Length = 1452 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 827 ggtgcgtggcatcctgctagagtgtcctacactgttgctagggctggtcagaacggttac 886 Query: 73 caccatcggactgagatgaacaagaag 99 || || || |||||| | ||||||||| Sbjct: 887 catcaccgtactgagcttaacaagaag 913
>gb|AF361101.1| Arabidopsis thaliana putative ribosomal protein (At1g43170) mRNA, complete cds Length = 1220 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 766 ggtgcgtggcatcctgctagagtgtcctacactgttgctagggctggtcagaacggttac 825 Query: 73 caccatcggactgagatgaacaagaag 99 || || || |||||| | ||||||||| Sbjct: 826 catcaccgtactgagcttaacaagaag 852
>gb|AF327421.1| Arabidopsis thaliana putative ribosomal protein (At1g43170) mRNA, complete cds Length = 1456 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 829 ggtgcgtggcatcctgctagagtgtcctacactgttgctagggctggtcagaacggttac 888 Query: 73 caccatcggactgagatgaacaagaag 99 || || || |||||| | ||||||||| Sbjct: 889 catcaccgtactgagcttaacaagaag 915
>gb|AF361809.1| Arabidopsis thaliana At1g43170/F1I21_18 mRNA, complete cds Length = 1380 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 825 ggtgcgtggcatcctgctagagtgtcctacactgttgctagggctggtcagaacggttac 884 Query: 73 caccatcggactgagatgaacaagaag 99 || || || |||||| | ||||||||| Sbjct: 885 catcaccgtactgagcttaacaagaag 911
>gb|AY057487.1| Arabidopsis thaliana At1g43170/F1I21_18 mRNA, complete cds Length = 1361 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 823 ggtgcgtggcatcctgctagagtgtcctacactgttgctagggctggtcagaacggttac 882 Query: 73 caccatcggactgagatgaacaagaag 99 || || || |||||| | ||||||||| Sbjct: 883 catcaccgtactgagcttaacaagaag 909
>gb|AY052743.1| Arabidopsis thaliana At1g43170/F1I21_18 mRNA, complete cds Length = 1170 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 766 ggtgcgtggcatcctgctagagtgtcctacactgttgctagggctggtcagaacggttac 825 Query: 73 caccatcggactgagatgaacaagaag 99 || || || |||||| | ||||||||| Sbjct: 826 catcaccgtactgagcttaacaagaag 852
>gb|AY039544.1| Arabidopsis thaliana At1g43170/F1I21_18 mRNA, complete cds Length = 1440 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 829 ggtgcgtggcatcctgctagagtgtcctacactgttgctagggctggtcagaacggttac 888 Query: 73 caccatcggactgagatgaacaagaag 99 || || || |||||| | ||||||||| Sbjct: 889 catcaccgtactgagcttaacaagaag 915
>gb|M32654.1|ATHRPCA Arabidopsis thaliana cytoplasmic ribosomal protein mRNA, complete cds Length = 1462 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||||| |||||||||||||||||| ||||||||||||| || ||| Sbjct: 799 ggtgcgtggcatcctgctagagtgtcctacactgttgctagggctggtcagaacggttac 858 Query: 73 caccatcggactgagatgaacaagaag 99 || || || |||||| | ||||||||| Sbjct: 859 catcaccgtactgagcttaacaagaag 885
>dbj|AK109100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-B01, full insert sequence Length = 1470 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 310 ctggaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttc 369 |||||||| ||||||||||||||||| ||||| || |||||||| || ||||| || ||| Sbjct: 1101 ctggaggagatcaagctcaagtttgtggacacatcatccaagttcggccacggtcgcttc 1160 Query: 370 cagaccaccgacgagaagc 388 |||||| ||||||||||| Sbjct: 1161 cagacctacgacgagaagc 1179 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 166 aaggacatcactcccatgggtggcttccctcactatggtgtggtgaaggccgactacctg 225 ||||| ||||| |||||||| |||||||||||||| |||||||| |||| |||||||| Sbjct: 957 aaggagatcacccccatgggcggcttccctcactacggtgtggtcaaggaggactacctc 1016 Query: 226 atgatcaaggg 236 ||||||||||| Sbjct: 1017 atgatcaaggg 1027 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 55 gctggtcagaatggataccaccatcggactgagatgaacaagaaggtgtacaagattggc 114 |||||||||| || | |||||| || || ||||| |||||||||||||||||||||||| Sbjct: 846 gctggtcagatgggcttccaccaccgcacagagatcaacaagaaggtgtacaagattggc 905 Query: 115 aag 117 ||| Sbjct: 906 aag 908
>gb|DQ226841.1| Boechera divaricarpa isolate SLW-C-C02 mRNA sequence Length = 267 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| ||||||||||| || |||||||||||||| ||| |||||||||||||||| ||| Sbjct: 199 ggtgcgtggcatcctgccagagtgtcctacactgtagctagggctggtcagaatggttac 258 Query: 73 ca 74 || Sbjct: 259 ca 260
>ref|XM_531732.2| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 2 (LOC474504), mRNA Length = 1285 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 16 gcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccac 75 |||||||||||||| | ||| ||| | |||| ||||||||||| ||||| || ||||| Sbjct: 776 gcctggcatcctgcccgagtggccttctctgtggctcgggctgggcagaaaggctaccat 835 Query: 76 catcggactgagatgaacaagaaggtgtacaagattggc 114 || || |||||||| ||||||||| | |||||||||||| Sbjct: 836 caccgcactgagatcaacaagaagatatacaagattggc 874
>ref|XM_854851.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 8 (LOC474504), mRNA Length = 1133 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 16 gcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccac 75 |||||||||||||| | ||| ||| | |||| ||||||||||| ||||| || ||||| Sbjct: 624 gcctggcatcctgcccgagtggccttctctgtggctcgggctgggcagaaaggctaccat 683 Query: 76 catcggactgagatgaacaagaaggtgtacaagattggc 114 || || |||||||| ||||||||| | |||||||||||| Sbjct: 684 caccgcactgagatcaacaagaagatatacaagattggc 722
>ref|XM_854819.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 7 (LOC474504), mRNA Length = 1127 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 16 gcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccac 75 |||||||||||||| | ||| ||| | |||| ||||||||||| ||||| || ||||| Sbjct: 618 gcctggcatcctgcccgagtggccttctctgtggctcgggctgggcagaaaggctaccat 677 Query: 76 catcggactgagatgaacaagaaggtgtacaagattggc 114 || || |||||||| ||||||||| | |||||||||||| Sbjct: 678 caccgcactgagatcaacaagaagatatacaagattggc 716
>ref|XM_854715.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 4 (LOC474504), mRNA Length = 957 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 16 gcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccac 75 |||||||||||||| | ||| ||| | |||| ||||||||||| ||||| || ||||| Sbjct: 448 gcctggcatcctgcccgagtggccttctctgtggctcgggctgggcagaaaggctaccat 507 Query: 76 catcggactgagatgaacaagaaggtgtacaagattggc 114 || || |||||||| ||||||||| | |||||||||||| Sbjct: 508 caccgcactgagatcaacaagaagatatacaagattggc 546
>ref|XM_854682.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 3 (LOC474504), mRNA Length = 1254 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 16 gcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccac 75 |||||||||||||| | ||| ||| | |||| ||||||||||| ||||| || ||||| Sbjct: 745 gcctggcatcctgcccgagtggccttctctgtggctcgggctgggcagaaaggctaccat 804 Query: 76 catcggactgagatgaacaagaaggtgtacaagattggc 114 || || |||||||| ||||||||| | |||||||||||| Sbjct: 805 caccgcactgagatcaacaagaagatatacaagattggc 843
>emb|Z29555.2|BTRIPRL3 B.taurus mRNA for ribosomal protein L3 Length = 1294 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 19 tggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccaccat 78 ||||||||||| ||||| ||| | |||| ||||||||||| ||||| || ||||| || Sbjct: 786 tggcatcctgcccgggtggccttctctgtggctcgggctgggcagaaaggctaccatcac 845 Query: 79 cggactgagatgaacaagaaggtgtacaagattgg 113 || |||||||| ||||||||| | ||||||||||| Sbjct: 846 cgcactgagatcaacaagaagatctacaagattgg 880
>gb|BC102253.1| Bos taurus ribosomal protein L3, mRNA (cDNA clone MGC:127077 IMAGE:7942978), complete cds Length = 1305 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 19 tggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccaccat 78 ||||||||||| ||||| ||| | |||| ||||||||||| ||||| || ||||| || Sbjct: 797 tggcatcctgcccgggtggccttctctgtggctcgggctgggcagaaaggctaccatcac 856 Query: 79 cggactgagatgaacaagaaggtgtacaagattgg 113 || |||||||| ||||||||| | ||||||||||| Sbjct: 857 cgcactgagatcaacaagaagatctacaagattgg 891
>ref|NM_174715.1| Bos taurus ribosomal protein L3 (Rpl3), mRNA Length = 1294 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 19 tggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccaccat 78 ||||||||||| ||||| ||| | |||| ||||||||||| ||||| || ||||| || Sbjct: 786 tggcatcctgcccgggtggccttctctgtggctcgggctgggcagaaaggctaccatcac 845 Query: 79 cggactgagatgaacaagaaggtgtacaagattgg 113 || |||||||| ||||||||| | ||||||||||| Sbjct: 846 cgcactgagatcaacaagaagatctacaagattgg 880
>gb|BT021012.1| Bos taurus ribosomal protein L3 (RPL3), mRNA, complete cds Length = 1276 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 19 tggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccaccat 78 ||||||||||| ||||| ||| | |||| ||||||||||| ||||| || ||||| || Sbjct: 783 tggcatcctgcccgggtggccttctctgtggctcgggctgggcagaaaggctaccatcac 842 Query: 79 cggactgagatgaacaagaaggtgtacaagattgg 113 || |||||||| ||||||||| | ||||||||||| Sbjct: 843 cgcactgagatcaacaagaagatctacaagattgg 877
>ref|NM_104840.3| Arabidopsis thaliana ARP2/RPL3B; structural constituent of ribosome AT1G61580 (ARP2/RPL3B) mRNA, complete cds Length = 1343 Score = 65.9 bits (33), Expect = 1e-07 Identities = 201/257 (78%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||| ||||| || |||||||| || ||| | ||||| || || || ||| Sbjct: 804 ggtgcttggcatccagctagagtctcctacacggtggctagagctggacaaaacggttac 863 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 || || || ||||| |||||||||||||| ||| | |||| || ||||| ||||| || Sbjct: 864 catcaccgtactgaaatgaacaagaaggtataccgggttgggaaagttggccaggagact 923 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 || ||| || |||| ||||| ||||||||||| ||||| || ||||| || || Sbjct: 924 cactcagccatgaccgagtatgacagaaccgagaaggatatcacaccaatgggaggattt 983 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 || |||||||| | ||||||| || || |||||||||||||||| || || ||||| Sbjct: 984 ccccactatgggatagtgaaggaagattatttgatgatcaagggatgttgcgtggggcct 1043 Query: 253 aagaagcgtgtggtgac 269 ||||| ||||||||||| Sbjct: 1044 aagaaacgtgtggtgac 1060
>gb|BT005702.1| Arabidopsis thaliana clone U20878 putative ribosomal protein (At1g61580) mRNA, complete cds Length = 1204 Score = 65.9 bits (33), Expect = 1e-07 Identities = 201/257 (78%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||| ||||| || |||||||| || ||| | ||||| || || || ||| Sbjct: 766 ggtgcttggcatccagctagagtctcctacacggtggctagagctggacaaaacggttac 825 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 || || || ||||| |||||||||||||| ||| | |||| || ||||| ||||| || Sbjct: 826 catcaccgtactgaaatgaacaagaaggtataccgggttgggaaagttggccaggagact 885 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 || ||| || |||| ||||| ||||||||||| ||||| || ||||| || || Sbjct: 886 cactcagccatgaccgagtatgacagaaccgagaaggatatcacaccaatgggaggattt 945 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 || |||||||| | ||||||| || || |||||||||||||||| || || ||||| Sbjct: 946 ccccactatgggatagtgaaggaagattatttgatgatcaagggatgttgcgtggggcct 1005 Query: 253 aagaagcgtgtggtgac 269 ||||| ||||||||||| Sbjct: 1006 aagaaacgtgtggtgac 1022
>gb|BT003869.1| Arabidopsis thaliana clone RAFL15-38-D07 (R20878) putative ribosomal protein (At1g61580) mRNA, complete cds Length = 1376 Score = 65.9 bits (33), Expect = 1e-07 Identities = 201/257 (78%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||| ||||| || |||||||| || ||| | ||||| || || || ||| Sbjct: 810 ggtgcttggcatccagctagagtctcctacacggtggctagagctggacaaaacggttac 869 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggcaaggttggacaggaaacc 132 || || || ||||| |||||||||||||| ||| | |||| || ||||| ||||| || Sbjct: 870 catcaccgtactgaaatgaacaagaaggtataccgggttgggaaagttggccaggagact 929 Query: 133 catgatgcctctactgagttcgacaggaccgagaaggacatcactcccatgggtggcttc 192 || ||| || |||| ||||| ||||||||||| ||||| || ||||| || || Sbjct: 930 cactcagccatgaccgagtatgacagaaccgagaaggatatcacaccaatgggaggattt 989 Query: 193 cctcactatggtgtggtgaaggccgactacctgatgatcaagggatgctgtgtcgggcca 252 || |||||||| | ||||||| || || |||||||||||||||| || || ||||| Sbjct: 990 ccccactatgggatagtgaaggaagattatttgatgatcaagggatgttgcgtggggcct 1049 Query: 253 aagaagcgtgtggtgac 269 ||||| ||||||||||| Sbjct: 1050 aagaaacgtgtggtgac 1066
>gb|AY769270.1| Bombyx mori ribosomal protein L3 (RpL3) mRNA, complete cds Length = 1298 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 19 tggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccaccat 78 ||||||||| |||||||||| | |||||| ||||| ||||||||||| || || || || Sbjct: 772 tggcatccttctagggtgtcgttcactgtagctcgtgctggtcagaaaggttatcatcac 831 Query: 79 cggactgagatgaacaagaa 98 || ||||| ||||||||||| Sbjct: 832 cgtactgaaatgaacaagaa 851
>gb|AY829782.1| Lonomia obliqua ribosomal protein 24 mRNA, partial cds Length = 843 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 19 tggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccaccat 78 ||||||||| |||| || |||| ||| || ||| | ||||||||||| || || |||||| Sbjct: 370 tggcatccttctagagtttccttcaccgtggctagagctggtcagaaaggctatcaccat 429 Query: 79 cggactgagatgaacaagaa 98 || ||||||||||||||||| Sbjct: 430 cgtactgagatgaacaagaa 449 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 atgggtggcttccctcactatggtg 205 |||||||| |||||||||||||||| Sbjct: 550 atgggtggattccctcactatggtg 574
>emb|AJ238851.1|BTA238851 Bos taurus rpl3 gene for ribosomal protein L3, U43 snoRNA, U82 snoRNA, U83a snoRNA and U83b snoRNA genes Length = 6259 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 19 tggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccaccat 78 ||||||||||| ||||| ||| | |||| ||||||||||| ||||| || ||||| || Sbjct: 4445 tggcatcctgcccgggtggccttctctgtggctcgggctgggcagaaaggctaccatcac 4504 Query: 79 cggactgagatgaacaagaaggtg 102 || |||||||| |||||||||||| Sbjct: 4505 cgcactgagatcaacaagaaggtg 4528
>ref|XM_864664.1| PREDICTED: Bos taurus similar to ribosomal protein L3 (LOC613519), mRNA Length = 1314 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 19 tggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccaccat 78 ||||||||||| ||||| ||| | |||| | ||||||||| ||||| || ||||| || Sbjct: 818 tggcatcctgcctgggtggccttctctgtggttcgggctgggcagaaaggctaccatcac 877 Query: 79 cggactgagatgaacaagaaggtgtacaagattgg 113 || |||||||| ||||||||| | ||||||||||| Sbjct: 878 cgcactgagatcaacaagaagatctacaagattgg 912
>ref|XM_863217.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 9 (LOC475009), mRNA Length = 1217 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 16 gcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccac 75 |||||||||||||| | ||| ||| | || | ||||||||||| ||||| || ||||| Sbjct: 798 gcctggcatcctgcccgagtggccttctctatggctcgggctgggcagaaaggctaccat 857 Query: 76 catcggactgagatgaacaagaaggtgtacaagattggc 114 || || |||||||| ||||||||| | |||||||||||| Sbjct: 858 caccgcactgagatcaacaagaagatatacaagattggc 896
>ref|XM_863213.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 8 (LOC475009), mRNA Length = 1266 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 16 gcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccac 75 |||||||||||||| | ||| ||| | || | ||||||||||| ||||| || ||||| Sbjct: 752 gcctggcatcctgcccgagtggccttctctatggctcgggctgggcagaaaggctaccat 811 Query: 76 catcggactgagatgaacaagaaggtgtacaagattggc 114 || || |||||||| ||||||||| | |||||||||||| Sbjct: 812 caccgcactgagatcaacaagaagatatacaagattggc 850
>ref|XM_863208.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 7 (LOC475009), mRNA Length = 994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 16 gcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccac 75 |||||||||||||| | ||| ||| | || | ||||||||||| ||||| || ||||| Sbjct: 472 gcctggcatcctgcccgagtggccttctctatggctcgggctgggcagaaaggctaccat 531 Query: 76 catcggactgagatgaacaagaaggtgtacaagattggc 114 || || |||||||| ||||||||| | |||||||||||| Sbjct: 532 caccgcactgagatcaacaagaagatatacaagattggc 570
>ref|XM_863205.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 6 (LOC475009), mRNA Length = 1166 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 16 gcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccac 75 |||||||||||||| | ||| ||| | || | ||||||||||| ||||| || ||||| Sbjct: 652 gcctggcatcctgcccgagtggccttctctatggctcgggctgggcagaaaggctaccat 711 Query: 76 catcggactgagatgaacaagaaggtgtacaagattggc 114 || || |||||||| ||||||||| | |||||||||||| Sbjct: 712 caccgcactgagatcaacaagaagatatacaagattggc 750
>ref|XM_863203.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 5 (LOC475009), mRNA Length = 1162 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 16 gcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccac 75 |||||||||||||| | ||| ||| | || | ||||||||||| ||||| || ||||| Sbjct: 640 gcctggcatcctgcccgagtggccttctctatggctcgggctgggcagaaaggctaccat 699 Query: 76 catcggactgagatgaacaagaaggtgtacaagattggc 114 || || |||||||| ||||||||| | |||||||||||| Sbjct: 700 caccgcactgagatcaacaagaagatatacaagattggc 738
>ref|XM_863199.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 4 (LOC475009), mRNA Length = 1000 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 16 gcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccac 75 |||||||||||||| | ||| ||| | || | ||||||||||| ||||| || ||||| Sbjct: 478 gcctggcatcctgcccgagtggccttctctatggctcgggctgggcagaaaggctaccat 537 Query: 76 catcggactgagatgaacaagaaggtgtacaagattggc 114 || || |||||||| ||||||||| | |||||||||||| Sbjct: 538 caccgcactgagatcaacaagaagatatacaagattggc 576
>ref|XM_532246.2| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 1 (LOC475009), mRNA Length = 1321 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 16 gcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccac 75 |||||||||||||| | ||| ||| | || | ||||||||||| ||||| || ||||| Sbjct: 798 gcctggcatcctgcccgagtggccttctctatggctcgggctgggcagaaaggctaccat 857 Query: 76 catcggactgagatgaacaagaaggtgtacaagattggc 114 || || |||||||| ||||||||| | |||||||||||| Sbjct: 858 caccgcactgagatcaacaagaagatatacaagattggc 896
>ref|XM_854783.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 6 (LOC474504), mRNA Length = 615 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||||||||| ||||| || ||||| || || |||||||| ||||||||| | | Sbjct: 147 ctgtggctcgggctgggcagaaaggctaccatcaccgcactgagatcaacaagaagatat 206 Query: 104 acaagattggc 114 ||||||||||| Sbjct: 207 acaagattggc 217
>ref|XM_786257.1| PREDICTED: Strongylocentrotus purpuratus similar to 60S ribosomal protein L3 (L4) (LOC586477), mRNA Length = 1495 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 178 cccatgggtggcttccctcactatggtgtggtgaaggccgactacctgatgatcaaggg 236 |||||||| || |||||||||||||||| |||||| ||||| ||||||||||||||| Sbjct: 1039 cccatgggaggattccctcactatggtgaagtgaagaacgacttcctgatgatcaaggg 1097 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 58 ggtcagaatggataccaccatcggactgagatgaacaagaaggtgtac 105 |||||||| || |||||||| || || ||||| ||||||||||||||| Sbjct: 901 ggtcagaagggctaccaccaccgtaccgagatcaacaagaaggtgtac 948
>gb|BT011339.1| Drosophila melanogaster RH62603 full insert cDNA Length = 1396 Score = 60.0 bits (30), Expect = 8e-06 Identities = 164/206 (79%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 171 catcactcccatgggtggcttccctcactatggtgtggtgaaggccgactacctgatgat 230 |||||| ||||||||||||||||| ||||| |||| ||| || ||||| | | ||||| Sbjct: 973 catcacgcccatgggtggcttcccccactacggtgaggtcaacaacgacttcgtcatgat 1032 Query: 231 caagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctgccagtccctgctgaa 290 |||||| ||||| |||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 1033 caagggctgctgcatcggctccaagaagcgcatcatcaccctgcgcaagtccctgctgaa 1092 Query: 291 gcagacctctcgtctc-gcactggaggaaatcaagctcaagtttgtcgacacctcttcca 349 ||| ||| || ||| || |||||| | |||||||||||||| |||||||||| |||| Sbjct: 1093 gcacaccaagcg-ctctgccctggagcagatcaagctcaagttcatcgacacctcgtcca 1151 Query: 350 agtttgggcacggccgtttccagacc 375 || | || ||||| || ||||||||| Sbjct: 1152 agatgggtcacggtcgcttccagacc 1177
>ref|XM_863194.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3 (L4), transcript variant 3 (LOC475009), mRNA Length = 1257 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 49 gctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgtacaag 108 ||||||||||| ||||| || ||||| || || |||||||| ||||||||| | |||||| Sbjct: 767 gctcgggctgggcagaaaggctaccatcaccgcactgagatcaacaagaagatatacaag 826 Query: 109 attggc 114 |||||| Sbjct: 827 attggc 832
>ref|NM_169379.1| Drosophila melanogaster Ribosomal protein L3 CG4863-RE, transcript variant E (RpL3), mRNA Length = 1829 Score = 60.0 bits (30), Expect = 8e-06 Identities = 164/206 (79%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 171 catcactcccatgggtggcttccctcactatggtgtggtgaaggccgactacctgatgat 230 |||||| ||||||||||||||||| ||||| |||| ||| || ||||| | | ||||| Sbjct: 1192 catcacgcccatgggtggcttcccccactacggtgaggtcaacaacgacttcgtcatgat 1251 Query: 231 caagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctgccagtccctgctgaa 290 |||||| ||||| |||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 1252 caagggctgctgcatcggctccaagaagcgcatcatcaccctgcgcaagtccctgctgaa 1311 Query: 291 gcagacctctcgtctc-gcactggaggaaatcaagctcaagtttgtcgacacctcttcca 349 ||| ||| || ||| || |||||| | |||||||||||||| |||||||||| |||| Sbjct: 1312 gcacaccaagcg-ctctgccctggagcagatcaagctcaagttcatcgacacctcgtcca 1370 Query: 350 agtttgggcacggccgtttccagacc 375 || | || ||||| || ||||||||| Sbjct: 1371 agatgggtcacggtcgcttccagacc 1396
>ref|NM_169378.1| Drosophila melanogaster Ribosomal protein L3 CG4863-RB, transcript variant B (RpL3), mRNA Length = 1579 Score = 60.0 bits (30), Expect = 8e-06 Identities = 164/206 (79%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 171 catcactcccatgggtggcttccctcactatggtgtggtgaaggccgactacctgatgat 230 |||||| ||||||||||||||||| ||||| |||| ||| || ||||| | | ||||| Sbjct: 942 catcacgcccatgggtggcttcccccactacggtgaggtcaacaacgacttcgtcatgat 1001 Query: 231 caagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctgccagtccctgctgaa 290 |||||| ||||| |||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 1002 caagggctgctgcatcggctccaagaagcgcatcatcaccctgcgcaagtccctgctgaa 1061 Query: 291 gcagacctctcgtctc-gcactggaggaaatcaagctcaagtttgtcgacacctcttcca 349 ||| ||| || ||| || |||||| | |||||||||||||| |||||||||| |||| Sbjct: 1062 gcacaccaagcg-ctctgccctggagcagatcaagctcaagttcatcgacacctcgtcca 1120 Query: 350 agtttgggcacggccgtttccagacc 375 || | || ||||| || ||||||||| Sbjct: 1121 agatgggtcacggtcgcttccagacc 1146
>ref|NM_079592.2| Drosophila melanogaster Ribosomal protein L3 CG4863-RA, transcript variant A (RpL3), mRNA Length = 1610 Score = 60.0 bits (30), Expect = 8e-06 Identities = 164/206 (79%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 171 catcactcccatgggtggcttccctcactatggtgtggtgaaggccgactacctgatgat 230 |||||| ||||||||||||||||| ||||| |||| ||| || ||||| | | ||||| Sbjct: 973 catcacgcccatgggtggcttcccccactacggtgaggtcaacaacgacttcgtcatgat 1032 Query: 231 caagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctgccagtccctgctgaa 290 |||||| ||||| |||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 1033 caagggctgctgcatcggctccaagaagcgcatcatcaccctgcgcaagtccctgctgaa 1092 Query: 291 gcagacctctcgtctc-gcactggaggaaatcaagctcaagtttgtcgacacctcttcca 349 ||| ||| || ||| || |||||| | |||||||||||||| |||||||||| |||| Sbjct: 1093 gcacaccaagcg-ctctgccctggagcagatcaagctcaagttcatcgacacctcgtcca 1151 Query: 350 agtttgggcacggccgtttccagacc 375 || | || ||||| || ||||||||| Sbjct: 1152 agatgggtcacggtcgcttccagacc 1177
>gb|AC006491.24|AC006491 Drosophila melanogaster, chromosome 3R, region 86D1-86E1, BAC clone BACR48M21, complete sequence Length = 164386 Score = 60.0 bits (30), Expect = 8e-06 Identities = 164/206 (79%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 171 catcactcccatgggtggcttccctcactatggtgtggtgaaggccgactacctgatgat 230 |||||| ||||||||||||||||| ||||| |||| ||| || ||||| | | ||||| Sbjct: 113024 catcacgcccatgggtggcttcccccactacggtgaggtcaacaacgacttcgtcatgat 113083 Query: 231 caagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctgccagtccctgctgaa 290 |||||| ||||| |||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 113084 caagggctgctgcatcggctccaagaagcgcatcatcaccctgcgcaagtccctgctgaa 113143 Query: 291 gcagacctctcgtctc-gcactggaggaaatcaagctcaagtttgtcgacacctcttcca 349 ||| ||| || ||| || |||||| | |||||||||||||| |||||||||| |||| Sbjct: 113144 gcacaccaagcg-ctctgccctggagcagatcaagctcaagttcatcgacacctcgtcca 113202 Query: 350 agtttgggcacggccgtttccagacc 375 || | || ||||| || ||||||||| Sbjct: 113203 agatgggtcacggtcgcttccagacc 113228
>gb|AE003690.3| Drosophila melanogaster chromosome 3R, section 28 of 118 of the complete sequence Length = 170298 Score = 60.0 bits (30), Expect = 8e-06 Identities = 164/206 (79%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 171 catcactcccatgggtggcttccctcactatggtgtggtgaaggccgactacctgatgat 230 |||||| ||||||||||||||||| ||||| |||| ||| || ||||| | | ||||| Sbjct: 138249 catcacgcccatgggtggcttcccccactacggtgaggtcaacaacgacttcgtcatgat 138308 Query: 231 caagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctgccagtccctgctgaa 290 |||||| ||||| |||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 138309 caagggctgctgcatcggctccaagaagcgcatcatcaccctgcgcaagtccctgctgaa 138368 Query: 291 gcagacctctcgtctc-gcactggaggaaatcaagctcaagtttgtcgacacctcttcca 349 ||| ||| || ||| || |||||| | |||||||||||||| |||||||||| |||| Sbjct: 138369 gcacaccaagcg-ctctgccctggagcagatcaagctcaagttcatcgacacctcgtcca 138427 Query: 350 agtttgggcacggccgtttccagacc 375 || | || ||||| || ||||||||| Sbjct: 138428 agatgggtcacggtcgcttccagacc 138453
>gb|AF016835.1|AF016835 Drosophila melanogaster ribosomal protein L3 (RpL3) mRNA, complete cds Length = 1381 Score = 60.0 bits (30), Expect = 8e-06 Identities = 164/206 (79%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 171 catcactcccatgggtggcttccctcactatggtgtggtgaaggccgactacctgatgat 230 |||||| ||||||||||||||||| ||||| |||| ||| || ||||| | | ||||| Sbjct: 972 catcacgcccatgggtggcttcccccactacggtgaggtcaacaacgacttcgtcatgat 1031 Query: 231 caagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctgccagtccctgctgaa 290 |||||| ||||| |||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 1032 caagggctgctgcatcggctccaagaagcgcatcatcaccctgcgcaagtccctgctgaa 1091 Query: 291 gcagacctctcgtctc-gcactggaggaaatcaagctcaagtttgtcgacacctcttcca 349 ||| ||| || ||| || |||||| | |||||||||||||| |||||||||| |||| Sbjct: 1092 gcacaccaagcg-ctctgccctggagcagatcaagctcaagttcatcgacacctcgtcca 1150 Query: 350 agtttgggcacggccgtttccagacc 375 || | || ||||| || ||||||||| Sbjct: 1151 agatgggtcacggtcgcttccagacc 1176
>gb|M32655.1|ATHRPCB Arabidopsis thaliana ribosomal protein gene, complete cds Length = 2068 Score = 60.0 bits (30), Expect = 8e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 160 accgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaaggccgac 219 ||||||||||| ||||| || ||||| || || || |||||||| | ||||||| || Sbjct: 1459 accgagaaggatatcacaccaatgggaggatttccccactatgggatagtgaaggaagat 1518 Query: 220 tacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgac 269 || |||||||||||||||| || || ||||| ||||| ||||||||||| Sbjct: 1519 tatttgatgatcaagggatgttgcgtggggcctaagaaacgtgtggtgac 1568 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||| ||||| || |||||||| || ||| | ||||| || || || ||| Sbjct: 1217 ggtgcttggcatccagctagagtctcctacacggtggctagagctggacaaaacggttac 1276 Query: 73 caccatcggactgagatgaacaagaaggt 101 || || || ||||| |||||||||||||| Sbjct: 1277 catcaccgtactgaaatgaacaagaaggt 1305
>gb|AC005850.1| Arabidopsis thaliana chromosome I BAC T25B24 genomic sequence, complete sequence Length = 84432 Score = 60.0 bits (30), Expect = 8e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 160 accgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaaggccgac 219 ||||||||||| ||||| || ||||| || || || |||||||| | ||||||| || Sbjct: 50548 accgagaaggatatcacaccaatgggaggatttccccactatgggatagtgaaggaagat 50607 Query: 220 tacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgac 269 || |||||||||||||||| || || ||||| ||||| ||||||||||| Sbjct: 50608 tatttgatgatcaagggatgttgcgtggggcctaagaaacgtgtggtgac 50657 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||| ||||| || |||||||| || ||| | ||||| || || || ||| Sbjct: 50304 ggtgcttggcatccagctagagtctcctacacggtggctagagctggacaaaacggttac 50363 Query: 73 caccatcggactgagatgaacaagaaggt 101 || || || ||||| |||||||||||||| Sbjct: 50364 catcaccgtactgaaatgaacaagaaggt 50392
>ref|XM_414843.1| PREDICTED: Gallus gallus similar to 60S ribosomal protein L3-like (LOC416542), mRNA Length = 1303 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 39 ctacactgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaa 98 |||| |||||||||||||||| ||||| || ||||||||||| || ||| | |||||||| Sbjct: 808 ctactctgttgctcgggctggccagaagggctaccaccatcgcacggagctcaacaagaa 867 Query: 99 g 99 | Sbjct: 868 g 868
>ref|XM_547185.2| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3-like (LOC490065), mRNA Length = 1733 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 310 ctggaggaaatcaagctcaagtttgtcgacacctcttccaagtttgggcacggccgtttc 369 |||||| | ||| |||||||||| |||||||| | ||||||||||| |||||||| ||| Sbjct: 1339 ctggagaatatcgagctcaagttcatcgacaccacctccaagtttggccacggccgcttc 1398 Query: 370 cagac 374 ||||| Sbjct: 1399 cagac 1403 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 47 ttgctcgggctggtcagaatggataccaccatcggactgag 87 ||||||||||||| ||||| || |||||||| || |||||| Sbjct: 1058 ttgctcgggctgggcagaagggctaccaccaccgcactgag 1098
>emb|BX929329.2| Gallus gallus finished cDNA, clone ChEST982j14 Length = 1303 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 39 ctacactgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaa 98 |||| |||||||||||||||| ||||| || ||||||||||| || ||| | |||||||| Sbjct: 809 ctactctgttgctcgggctggccagaagggctaccaccatcgcacggagctcaacaagaa 868 Query: 99 g 99 | Sbjct: 869 g 869
>emb|BX935844.1| Gallus gallus finished cDNA, clone ChEST163e11 Length = 1304 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 39 ctacactgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaa 98 |||| |||||||||||||||| ||||| || ||||||||||| || ||| | |||||||| Sbjct: 809 ctactctgttgctcgggctggccagaagggctaccaccatcgcacggagctcaacaagaa 868 Query: 99 g 99 | Sbjct: 869 g 869
>gb|AY072287.1| Spodoptera frugiperda ribosomal protein L3 mRNA, complete cds Length = 1380 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 19 tggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggataccaccat 78 ||||||||| | || ||||| | ||| ||||| || ||||||||||| || |||||||| Sbjct: 796 tggcatccttcaagagtgtcattcaccgttgcccgtgctggtcagaagggctaccaccac 855 Query: 79 cggactgagatgaacaagaag 99 || || ||||||||||||||| Sbjct: 856 cgtacggagatgaacaagaag 876 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 171 catcactcccatgggtggcttccctcactatgg 203 |||||| ||||||||||| ||||| |||||||| Sbjct: 966 catcacccccatgggtggtttcccccactatgg 998
>gb|DQ249176.1| Homo sapiens isolate 218CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic sequence Length = 363675 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 337 gacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||||| ||||||||||| || ||||| ||||||||||| || |||||| Sbjct: 110896 gacacctcctccaagtttggccatggccgcttccagaccacggaggagaag 110846
>gb|DQ249173.1| Homo sapiens isolate 135CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic sequence Length = 336776 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 337 gacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||||| ||||||||||| || ||||| ||||||||||| || |||||| Sbjct: 90000 gacacctcctccaagtttggccatggccgcttccagaccacggaggagaag 89950
>emb|BX248310.3| Human DNA sequence from clone DASS-311G1 on chromosome 6, complete sequence Length = 116320 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 337 gacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||||| ||||||||||| || ||||| ||||||||||| || |||||| Sbjct: 18123 gacacctcctccaagtttggccatggccgcttccagaccacggaggagaag 18173
>emb|AL845443.3| Human DNA sequence from clone DAQB-48K1 on chromosome 6 Contains the USP8P pseudogene for ubiquitin specific protease 8, the RPL3P2 pseudogene for ribosomal protein L3 pseudogene 2, the WASF5P pseudogene for WAS protein family, member 5, the HLA-B gene for major histocompatibility complex, class I, B, the DHFRP2 pseudogene for dihydrofolate reductase 2, the FGFR3P pseudogene for fibroblast growth factor receptor 3, the HLA-S gene for major histocompatibility complex, class I, S, the MICA gene for MHC class I polypeptide-related sequence A and 3 CpG islands, complete sequence Length = 148076 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 337 gacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||||| ||||||||||| || ||||| ||||||||||| || |||||| Sbjct: 9550 gacacctcctccaagtttggccatggccgcttccagaccacggaggagaag 9600
>gb|AC004204.1|AC004204 Homo sapiens clone UWGC:y3c018 from 6p21, complete sequence Length = 46797 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 337 gacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||||| ||||||||||| || ||||| ||||||||||| || |||||| Sbjct: 20466 gacacctcctccaagtttggccatggccgcttccagaccacggaggagaag 20416
>gb|AF526241.1| Chlamys farreri clone iolscfcl1ct2cn2 ribosomal protein L3 mRNA, partial cds Length = 1190 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 170 acatcactcccatgggtggcttccctcactatgg 203 ||||||||||||||||||| ||||| |||||||| Sbjct: 943 acatcactcccatgggtggtttcccccactatgg 976
>dbj|AB243054.1| Oncorhynchus mykiss mRNA for sex hormone-binding globulin, complete cds Length = 3485 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 325 ctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccagac 374 |||||||| |||||||| | ||||||||||| |||||||| |||||||| Sbjct: 204 ctcaagttcatcgacaccacctccaagtttggccacggccgcttccagac 155 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Minus Query: 55 gctggtcagaatggataccaccatcggactgagatgaacaagaaggtgtacaagat 110 ||||||||||| || |||||||| || || ||||| ||||||||| | |||||||| Sbjct: 492 gctggtcagaaaggctaccaccaccgcacagagatcaacaagaagatctacaagat 437
>gb|AY961520.1| Lysiphlebus testaceipes ribosomal protein L3 variant 1 (RpL3) mRNA, complete cds Length = 1239 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 42 cactgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaa 95 |||||||||||| |||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 792 cactgttgctcgtgctggtcaaaaaggttaccatcatcgtactgaaatgaacaa 845
>gb|AY961519.1| Lysiphlebus testaceipes ribosomal protein L3 (RpL3) mRNA, complete cds Length = 1239 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 42 cactgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaa 95 |||||||||||| |||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 792 cactgttgctcgtgctggtcaaaaaggttaccatcatcgtactgaaatgaacaa 845
>gb|DQ206600.1| Monosiga brevicollis isolate TOA20 ribosomal protein 3 large subunit mRNA, partial cds Length = 995 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 325 ctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccagac 374 |||||||| |||||||||| ||||||||||| ||||| || |||||||| Sbjct: 946 ctcaagttcatcgacacctcgtccaagtttggccacggtcgcttccagac 995 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 178 cccatgggtggcttccctcactatggtgtggtgaaggccgactacctgatgatcaaggg 236 |||||||| |||||||||||||| ||| |||| |||| || | |||||| |||||||| Sbjct: 799 cccatgggcggcttccctcactacggtctggtcaaggaggatttcctgatcatcaaggg 857
>ref|NM_001001590.1| Danio rerio ribosomal protein L3 (rpl3), mRNA Length = 1371 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||||| | ||||||||||| || || ||||||||||||| ||| |||||| Sbjct: 1184 tcgacaccacctccaagtttggtcatggacgtttccagaccatcgaagagaag 1236
>gb|AY561514.1| Danio rerio ribosomal protein L3 (rpl3) mRNA, complete cds Length = 1371 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||||| | ||||||||||| || || ||||||||||||| ||| |||||| Sbjct: 1184 tcgacaccacctccaagtttggtcatggacgtttccagaccatcgaagagaag 1236
>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3, complete sequence Length = 241961 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||||| | ||||||||||| || || ||||||||||||| ||| |||||| Sbjct: 170148 tcgacaccacctccaagtttggtcatggacgtttccagaccatcgaagagaag 170096
>gb|BC091460.1| Danio rerio ribosomal protein L3, mRNA (cDNA clone MGC:110350 IMAGE:7403740), complete cds Length = 1324 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||||| | ||||||||||| || || ||||||||||||| ||| |||||| Sbjct: 1126 tcgacaccacctccaagtttggtcatggacgtttccagaccatcgaagagaag 1178
>gb|DQ206553.1| Leucosolenia sp. AR-2003 isolate TOA20 ribosomal protein 3 large subunit mRNA, partial cds Length = 958 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 171 catcactcccatgggtggcttccctcactatgg 203 |||||| ||||||||||||||||| |||||||| Sbjct: 774 catcacccccatgggtggcttcccccactatgg 806
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 141 ctctactgagttcgacaggaccgagaaggacatcactcccatgggtgg 188 |||||||||||| ||| ||| ||||||||||||| ||||||||||| Sbjct: 662604 ctctactgagtttgacctcaccaagaaggacatcacccccatgggtgg 662651
>gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosome 17, complete sequence Length = 204306 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Minus Query: 52 cgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||||||| ||||| || |||||||| || || ||| ||||||||||||||| Sbjct: 29424 cgggctgggcagaagggttaccaccaccgtacagagctgaacaagaaggtgt 29373
>ref|NM_013762.1| Mus musculus ribosomal protein L3 (Rpl3), mRNA Length = 1276 Score = 48.1 bits (24), Expect = 0.032 Identities = 60/72 (83%) Strand = Plus / Plus Query: 42 cactgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggt 101 |||||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | Sbjct: 801 cactgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagat 860 Query: 102 gtacaagattgg 113 ||||||||||| Sbjct: 861 ttacaagattgg 872
>ref|XM_567698.1| Cryptococcus neoformans var. neoformans JEC21 large subunit ribosomal protein L3 (CNK02240) partial mRNA Length = 1301 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 141 ctctactgagttcgacaggaccgagaaggacatcactcccatgggtgg 188 |||||||||||| ||| ||| ||||||||||||| ||||||||||| Sbjct: 911 ctctactgagtttgacctcaccaagaaggacatcacccccatgggtgg 958
>emb|AM048986.1| Mycetophagus quadripustulatus partial mRNA for ribosomal protein L3e (rpL3e gene) Length = 852 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 43 actgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaa 98 ||||| ||||| ||||||||||| || || || ||||| ||||| ||||||||||| Sbjct: 421 actgtagctcgtgctggtcagaaaggctatcatcatcgtactgaaatgaacaagaa 476
>emb|Y00225.1|MMJ1PRO Murine mRNA for J1 protein, yeast ribosomal protein L3 homologue Length = 1276 Score = 48.1 bits (24), Expect = 0.032 Identities = 60/72 (83%) Strand = Plus / Plus Query: 42 cactgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggt 101 |||||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | Sbjct: 801 cactgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagat 860 Query: 102 gtacaagattgg 113 ||||||||||| Sbjct: 861 ttacaagattgg 872
>dbj|AB238911.1| Papilio xuthus rpL3 mRNA for ribosomal protein L3, complete cds Length = 1309 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 178 cccatgggtggcttccctcactatggtg 205 ||||||||||| |||||||||||||||| Sbjct: 961 cccatgggtgggttccctcactatggtg 988
>gb|DQ206501.1| Priapulus caudatus isolate TOA20 ribosomal protein 3 large subunit mRNA, partial cds Length = 958 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 42 cactgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggt 101 |||||| ||||| ||||||||||| || || ||||| || || ||||| ||||||||||| Sbjct: 627 cactgtggctcgcgctggtcagaagggctatcaccaccgtacggagattaacaagaaggt 686 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 172 atcactcccatgggtggcttccctcactatgg 203 ||||| || ||||||||||||||||| ||||| Sbjct: 775 atcacaccaatgggtggcttccctcattatgg 806
>gb|DQ249182.1| Homo sapiens isolate 541CLS41 haplotype HLA-B5001/HLA-Cw0602 genomic sequence Length = 346809 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 337 gacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||| | ||||||||||| || ||||| ||||||||||| || |||||| Sbjct: 96179 gacaccccctccaagtttggccatggccgcttccagaccacggaggagaag 96129
>gb|DQ249180.1| Homo sapiens isolate 495CLS44 haplotype HLA-B570101/HLA-Cw0602 genomic sequence Length = 265420 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 337 gacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||| | ||||||||||| || ||||| ||||||||||| || |||||| Sbjct: 99338 gacaccccctccaagtttggccatggccgcttccagaccacggaggagaag 99288
>gb|DQ249177.1| Homo sapiens isolate 218CLS60 haplotype HLA-B15010101/HLA-Cw030401 genomic sequence Length = 351341 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 337 gacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||| | ||||||||||| || ||||| ||||||||||| || |||||| Sbjct: 110971 gacaccccctccaagtttggccatggccgcttccagaccacggaggagaag 110921
>emb|CR759828.5| Human DNA sequence from clone DAMC-153L10 on chromosome 6, complete sequence Length = 102821 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 337 gacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||| | ||||||||||| || ||||| ||||||||||| || |||||| Sbjct: 20059 gacaccccctccaagtttggccatggccgcttccagaccacggaggagaag 20109
>emb|CR759814.6| Human DNA sequence from clone DADB-15N24 on chromosome 6, complete sequence Length = 63499 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 337 gacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||| | ||||||||||| || ||||| ||||||||||| || |||||| Sbjct: 1979 gacaccccctccaagtttggccatggccgcttccagaccacggaggagaag 2029
>gb|AY857414.1| Suberites domuncula L3 mRNA, complete cds Length = 1200 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 182 tgggtggcttccctcactatggt 204 ||||||||||||||||||||||| Sbjct: 932 tgggtggcttccctcactatggt 954
>dbj|AK105522.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F11, full insert sequence Length = 1365 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 325 ctcaagtttgtcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| ||||||||||||||||| | || ||||| || ||||||||| Sbjct: 1112 ctcaagttcatcgacacctcttccaagatgggccacggtcgcttccagacc 1162
>ref|NM_001006241.1| Gallus gallus ribosomal protein L3 (RPL3), mRNA Length = 1324 Score = 44.1 bits (22), Expect = 0.50 Identities = 82/102 (80%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||| | ||| | | | |||| || || ||||||||||| || ||| Sbjct: 788 ggtgcatggcatcctgctcgtgtggctttctctgtggcccgtgctggtcagaaagggtac 847 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggc 114 |||||||| || || || || ||||| | |||||||||||| Sbjct: 848 caccatcgtaccgaaatcaataagaaaatctacaagattggc 889
>gb|BC083134.1| Mus musculus ribosomal protein L3, mRNA (cDNA clone MGC:103388 IMAGE:6504713), complete cds Length = 1297 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 803 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 862 Query: 104 acaagattgg 113 |||||||||| Sbjct: 863 acaagattgg 872
>gb|AC091473.2| Mus musculus chromosome X clones RP21-114F21, RP21-430D6 complete sequence Length = 221860 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 92662 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 92721 Query: 104 acaagattgg 113 |||||||||| Sbjct: 92722 acaagattgg 92731
>ref|XM_424022.1| PREDICTED: Gallus gallus similar to 60S ribosomal protein L3 (L4) (LOC426367), partial mRNA Length = 639 Score = 44.1 bits (22), Expect = 0.50 Identities = 82/102 (80%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||| | ||| | | | |||| || || ||||||||||| || ||| Sbjct: 118 ggtgcatggcatcctgctcgtgtggctttctctgtggcccgtgctggtcagaaagggtac 177 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggc 114 |||||||| || || || || ||||| | |||||||||||| Sbjct: 178 caccatcgtaccgaaatcaataagaaaatctacaagattggc 219
>gb|BC058494.1| Rattus norvegicus ribosomal protein L3, mRNA (cDNA clone MGC:72934 IMAGE:6887923), complete cds Length = 1320 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 823 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagatcaacaagaagattt 882 Query: 104 acaagattgg 113 |||||||||| Sbjct: 883 acaagattgg 892
>gb|BC098497.1| Mus musculus ribosomal protein L3, mRNA (cDNA clone IMAGE:30078265), with apparent retained intron Length = 1872 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 1379 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 1438 Query: 104 acaagattgg 113 |||||||||| Sbjct: 1439 acaagattgg 1448
>ref|XR_002626.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L3 (J1 protein) (LOC669672), mRNA Length = 1337 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 823 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 882 Query: 104 acaagattgg 113 |||||||||| Sbjct: 883 acaagattgg 892
>ref|XM_977452.1| PREDICTED: Mus musculus similar to ribosomal protein L3 isoform b, transcript variant 1 (LOC674874), mRNA Length = 1012 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 500 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 559 Query: 104 acaagattgg 113 |||||||||| Sbjct: 560 acaagattgg 569
>ref|XM_977518.1| PREDICTED: Mus musculus similar to ribosomal protein L3 isoform b, transcript variant 3 (LOC674874), mRNA Length = 1191 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 679 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 738 Query: 104 acaagattgg 113 |||||||||| Sbjct: 739 acaagattgg 748
>ref|XM_977487.1| PREDICTED: Mus musculus similar to ribosomal protein L3 isoform b, transcript variant 2 (LOC674874), mRNA Length = 1335 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 823 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 882 Query: 104 acaagattgg 113 |||||||||| Sbjct: 883 acaagattgg 892
>ref|XM_981530.1| PREDICTED: Mus musculus similar to ribosomal protein L3 isoform b, transcript variant 1 (LOC668219), mRNA Length = 1012 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 500 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 559 Query: 104 acaagattgg 113 |||||||||| Sbjct: 560 acaagattgg 569
>ref|XM_981609.1| PREDICTED: Mus musculus similar to ribosomal protein L3 isoform b, transcript variant 3 (LOC668219), mRNA Length = 1191 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 679 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 738 Query: 104 acaagattgg 113 |||||||||| Sbjct: 739 acaagattgg 748
>ref|XM_981570.1| PREDICTED: Mus musculus similar to ribosomal protein L3 isoform b, transcript variant 2 (LOC668219), mRNA Length = 1335 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 823 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 882 Query: 104 acaagattgg 113 |||||||||| Sbjct: 883 acaagattgg 892
>ref|XM_977204.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L3 (J1 protein) (LOC674810), mRNA Length = 1283 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 767 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 826 Query: 104 acaagattgg 113 |||||||||| Sbjct: 827 acaagattgg 836
>gb|AC129296.2| Mus musculus BAC clone RP24-574O8 from chromosome 3, complete sequence Length = 149793 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Minus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 33745 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 33686 Query: 104 acaagattgg 113 |||||||||| Sbjct: 33685 acaagattgg 33676
>emb|AM048987.1| Scarabaeus laticollis mRNA for ribosomal protein L3e (rpL3e gene) Length = 1233 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 58 ggtcagaatggataccaccatcggactgagatgaacaagaag 99 |||||||| || ||||||||||| || || |||||||||||| Sbjct: 808 ggtcagaagggctaccaccatcgcacggaaatgaacaagaag 849
>emb|BX119917.9| Human DNA sequence from clone RP11-262D11 on chromosome X Contains the gene for a novel protein (KIAA2001), the gene for a novel protein similar to multidomain presynaptic cytomatrix protein Piccolo; piccolo (presynaptic cytomatrix protein), an apoptosis inhibitor (FKSG2) pseudogene, the PIN4 gene for protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 4 (parvulin), the 3' end of the gene for a novel protein (FLJ20105) and a two CpG islands, complete sequence Length = 134620 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 308 cactggaggaaatcaagctcaagttt 333 |||||||| ||||||||||||||||| Sbjct: 38097 cactggagaaaatcaagctcaagttt 38122
>ref|XM_966782.1| PREDICTED: Tribolium castaneum similar to CG4863-PA, isoform A (LOC660560), mRNA Length = 1365 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 172 atcactcccatgggtggcttccctcactatggtg 205 ||||| || ||||||||||||||||| ||||||| Sbjct: 1033 atcacgccaatgggtggcttccctcattatggtg 1066
>emb|X62166.1|RRRPL3 R.rattus mRNA for ribosomal protein L3 Length = 1316 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 824 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagatcaacaagaagattt 883 Query: 104 acaagattgg 113 |||||||||| Sbjct: 884 acaagattgg 893
>gb|AF526233.1| Argopecten irradians isolate iolsaicl555ct596cn620 ribosomal protein L3 mRNA, partial cds Length = 818 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 170 acatcactcccatgggtggcttccctcactatgg 203 ||||||| |||||||| || |||||||||||||| Sbjct: 498 acatcacccccatgggaggattccctcactatgg 531
>emb|AJ720292.1| Gallus gallus mRNA for hypothetical protein, clone 14e22 Length = 1324 Score = 44.1 bits (22), Expect = 0.50 Identities = 82/102 (80%) Strand = Plus / Plus Query: 13 ggtgcctggcatcctgctagggtgtcctacactgttgctcgggctggtcagaatggatac 72 ||||| |||||||||||| | ||| | | | |||| || || ||||||||||| || ||| Sbjct: 788 ggtgcatggcatcctgctcgtgtggctttctctgtggcccgtgctggtcagaaagggtac 847 Query: 73 caccatcggactgagatgaacaagaaggtgtacaagattggc 114 |||||||| || || || || ||||| | |||||||||||| Sbjct: 848 caccatcgtaccgaaatcaataagaaaatctacaagattggc 889
>gb|BC094059.1| Mus musculus ribosomal protein L3, mRNA (cDNA clone MGC:102482 IMAGE:3676103), complete cds Length = 1289 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 802 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 861 Query: 104 acaagattgg 113 |||||||||| Sbjct: 862 acaagattgg 871
>dbj|AK144518.1| Mus musculus 0 day neonate cortex cDNA, RIKEN full-length enriched library, clone:G630087L02 product:ribosomal protein L3, full insert sequence Length = 1296 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK151084.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830022L07 product:ribosomal protein L3, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK151057.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830022E13 product:ribosomal protein L3, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK151740.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830035O17 product:ribosomal protein L3, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK144816.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730037N11 product:ribosomal protein L3, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK151596.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830032A11 product:ribosomal protein L3, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK149494.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730026A15 product:ribosomal protein L3, full insert sequence Length = 1296 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK146502.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920015J23 product:ribosomal protein L3, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK151426.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830030A12 product:ribosomal protein L3, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK167787.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730024N05 product:ribosomal protein L3, full insert sequence Length = 1293 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK151142.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830025P10 product:ribosomal protein L3, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK168744.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920049H18 product:ribosomal protein L3, full insert sequence Length = 1292 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 819 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 878 Query: 104 acaagattgg 113 |||||||||| Sbjct: 879 acaagattgg 888
>dbj|AK166433.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930018I04 product:ribosomal protein L3, full insert sequence Length = 1289 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 817 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 876 Query: 104 acaagattgg 113 |||||||||| Sbjct: 877 acaagattgg 886
>dbj|AK172280.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830112M22 product:ribosomal protein L3, full insert sequence Length = 1296 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>ref|NG_005493.1| Mus musculus 60S ribosomal protein L3 pseudogene (LOC628388) on chromosome X Length = 1477 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 905 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 964 Query: 104 acaagattgg 113 |||||||||| Sbjct: 965 acaagattgg 974
>dbj|AK168224.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:I730069H15 product:ribosomal protein L3, full insert sequence Length = 1290 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK170819.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630201P10 product:ribosomal protein L3, full insert sequence Length = 1293 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK168128.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730059J09 product:ribosomal protein L3, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK168126.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:I730059I07 product:ribosomal protein L3, full insert sequence Length = 1290 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK168059.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730051P10 product:ribosomal protein L3, full insert sequence Length = 1292 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 820 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 879 Query: 104 acaagattgg 113 |||||||||| Sbjct: 880 acaagattgg 889
>dbj|AK168040.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730048L20 product:ribosomal protein L3, full insert sequence Length = 1293 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK166825.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0015I05 product:ribosomal protein L3, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK169321.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920183J11 product:ribosomal protein L3, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK169235.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920096G13 product:ribosomal protein L3, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK167947.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730043A05 product:ribosomal protein L3, full insert sequence Length = 1293 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK169060.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920077J23 product:ribosomal protein L3, full insert sequence Length = 1294 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>dbj|AK088993.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430034L18 product:ribosomal protein L3, full insert sequence Length = 1293 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 821 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 880 Query: 104 acaagattgg 113 |||||||||| Sbjct: 881 acaagattgg 890
>ref|NM_198753.1| Rattus norvegicus ribosomal protein L3 (Rpl3), mRNA Length = 1320 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 823 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagatcaacaagaagattt 882 Query: 104 acaagattgg 113 |||||||||| Sbjct: 883 acaagattgg 892
>dbj|AK219709.1| Mus musculus cDNA, clone:Y2G0149F14, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000000498, based on BLAT search Length = 394 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 309 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 368 Query: 104 acaagattgg 113 |||||||||| Sbjct: 369 acaagattgg 378
>dbj|AK215968.1| Mus musculus cDNA, clone:Y2G0136M06, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000000498, based on BLAT search Length = 401 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 197 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 256 Query: 104 acaagattgg 113 |||||||||| Sbjct: 257 acaagattgg 266
>dbj|AK204785.1| Mus musculus cDNA, clone:Y1G0149J22, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000000498, based on BLAT search Length = 392 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 116 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 175 Query: 104 acaagattgg 113 |||||||||| Sbjct: 176 acaagattgg 185
>dbj|AK204620.1| Mus musculus cDNA, clone:Y1G0149B07, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000000498, based on BLAT search Length = 391 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 123 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 182 Query: 104 acaagattgg 113 |||||||||| Sbjct: 183 acaagattgg 192
>dbj|AK199385.1| Mus musculus cDNA, clone:Y1G0131A15, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000000498, based on BLAT search Length = 384 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 108 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 167 Query: 104 acaagattgg 113 |||||||||| Sbjct: 168 acaagattgg 177
>dbj|AK199153.1| Mus musculus cDNA, clone:Y1G0130F08, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000000498, based on BLAT search Length = 386 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 110 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 169 Query: 104 acaagattgg 113 |||||||||| Sbjct: 170 acaagattgg 179
>dbj|AK197531.1| Mus musculus cDNA, clone:Y1G0125G04, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000000498, based on BLAT search Length = 377 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 197 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 256 Query: 104 acaagattgg 113 |||||||||| Sbjct: 257 acaagattgg 266
>dbj|AK192125.1| Mus musculus cDNA, clone:Y1G0107O21, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000000498, based on BLAT search Length = 408 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 132 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 191 Query: 104 acaagattgg 113 |||||||||| Sbjct: 192 acaagattgg 201
>dbj|AK190439.1| Mus musculus cDNA, clone:Y1G0102M04, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000000498, based on BLAT search Length = 387 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 197 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 256 Query: 104 acaagattgg 113 |||||||||| Sbjct: 257 acaagattgg 266
>gb|AF225211.1|AF225211 Trypanoplasma borreli ribosomal protein L3, genomic sequence Length = 1447 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 159 gaccgagaaggacatcactcccatgggtgg 188 ||||||||||| ||||||||||||||||| Sbjct: 1031 gaccgagaaggtgatcactcccatgggtgg 1060 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 40 tacactgttgctcgggctggtcagaatggataccacca 77 ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 909 tacaccgttgctcgtgctggacagaacggataccacca 946
>emb|AL833805.11| Mouse DNA sequence from clone RP23-158L19 on chromosome X, complete sequence Length = 118691 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 12791 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 12850 Query: 104 acaagattgg 113 |||||||||| Sbjct: 12851 acaagattgg 12860
>gb|BC085495.1| Mus musculus ribosomal protein L3, mRNA (cDNA clone IMAGE:30538513) Length = 1820 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 1325 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 1384 Query: 104 acaagattgg 113 |||||||||| Sbjct: 1385 acaagattgg 1394
>gb|BC009655.1| Mus musculus ribosomal protein L3, mRNA (cDNA clone MGC:6334 IMAGE:3485069), complete cds Length = 1304 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 817 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 876 Query: 104 acaagattgg 113 |||||||||| Sbjct: 877 acaagattgg 886
>gb|AC148095.5| Mus musculus chromosome 3, clone RP23-36C9, complete sequence Length = 194212 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 2141 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 2200 Query: 104 acaagattgg 113 |||||||||| Sbjct: 2201 acaagattgg 2210
>emb|AL928731.11| Mouse DNA sequence from clone RP23-171N20 on chromosome X, complete sequence Length = 114243 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 66077 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 66136 Query: 104 acaagattgg 113 |||||||||| Sbjct: 66137 acaagattgg 66146
>gb|U89417.1|MMU89417 Mus musculus strain BALB/c ribosomal protein L3 mRNA, partial cds Length = 352 Score = 44.1 bits (22), Expect = 0.50 Identities = 58/70 (82%) Strand = Plus / Plus Query: 44 ctgttgctcgggctggtcagaatggataccaccatcggactgagatgaacaagaaggtgt 103 |||| ||||| ||||| ||||| || ||||| || || || ||||| ||||||||| | | Sbjct: 249 ctgtggctcgagctgggcagaaaggctaccatcaccgaacagagattaacaagaagattt 308 Query: 104 acaagattgg 113 |||||||||| Sbjct: 309 acaagattgg 318
>gb|AF051237.1|AF051237 Picea mariana 60S ribosomal protein L3 (Sb51) mRNA, partial cds Length = 567 Score = 44.1 bits (22), Expect = 0.50 Identities = 178/230 (77%) Strand = Plus / Plus Query: 158 ggaccgagaaggacatcactcccatgggtggcttccctcactatggtgtggtgaaggccg 217 |||| |||||||| || || || |||||||| || || |||||||||||| | || | | Sbjct: 4 ggactgagaaggatataacaccaatgggtggttttccgcactatggtgtgttaaaagatg 63 Query: 218 actacctgatgatcaagggatgctgtgtcgggccaaagaagcgtgtggtgaccctctgcc 277 | ||| | ||||||| ||||| ||||| || | |||||||||||||| || | | | Sbjct: 64 attacattatgatcagaggatgttgtgtgggtaccaagaagcgtgtggttactttgcggc 123 Query: 278 agtccctgctgaagcagacctctcgtctcgcactggaggaaatcaagctcaagtttgtcg 337 |||| ||||||| ||||| |||||| || |||||||||||||| | ||||| | | Sbjct: 124 agtcgttgctgaaacagacttctcgtactgccttggaggaaatcaagttgaagttcattg 183 Query: 338 acacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||| || || ||||||||||| || || |||||||| ||| | |||||| Sbjct: 184 acacatcctctaagtttgggcatgggcgattccagacaacccaggagaag 233
>ref|XM_529137.1| PREDICTED: Pan troglodytes similar to ribosomal protein L3; 60S ribosomal protein L3; HIV-1 TAR RNA-binding protein B (LOC473764), mRNA Length = 957 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 55 gctggtcagaatggataccaccatcggactgagatgaacaagaag 99 ||||||||||| || ||||| ||| | |||||||| ||||||||| Sbjct: 553 gctggtcagaaaggctaccatcatggcactgagatcaacaagaag 597
>emb|CR666525.2|CNS0FD9F Tetraodon nigroviridis full-length cDNA Length = 1031 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttcca 371 |||||||| | ||||||||||| |||||||| ||||| Sbjct: 807 tcgacaccacctccaagtttggtcacggccgcttcca 843
>emb|CR665099.2|CNS0FC5T Tetraodon nigroviridis full-length cDNA Length = 868 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttcca 371 |||||||| | ||||||||||| |||||||| ||||| Sbjct: 643 tcgacaccacctccaagtttggtcacggccgcttcca 679
>emb|CR664922.2|CNS0FC0W Tetraodon nigroviridis full-length cDNA Length = 1506 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1341 tcgacaccacctccaagtttggtcacggacgcttccagacc 1381
>emb|CR733442.2|CNS0GSPD Tetraodon nigroviridis full-length cDNA Length = 1378 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttcca 371 |||||||| | ||||||||||| |||||||| ||||| Sbjct: 1164 tcgacaccacctccaagtttggtcacggccgcttcca 1200
>emb|CR733046.2|CNS0GSIY Tetraodon nigroviridis full-length cDNA Length = 1219 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1098 tcgacaccacctccaagtttggtcacggacgcttccagacc 1138
>emb|CR733117.1|CNS0GSK6 Tetraodon nigroviridis full-length cDNA Length = 1493 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1338 tcgacaccacctccaagtttggtcacggacgcttccagacc 1378
>emb|CR732569.2|CNS0GS72 Tetraodon nigroviridis full-length cDNA Length = 1272 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1103 tcgacaccacctccaagtttggtcacggacgcttccagacc 1143
>emb|CR732309.1|CNS0GRZU Tetraodon nigroviridis full-length cDNA Length = 1360 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttcca 371 |||||||| | ||||||||||| |||||||| ||||| Sbjct: 1151 tcgacaccacctccaagtttggtcacggccgcttcca 1187
>emb|CR731134.2|CNS0GR37 Tetraodon nigroviridis full-length cDNA Length = 1249 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1129 tcgacaccacctccaagtttggtcacggacgcttccagacc 1169
>emb|CR731117.2|CNS0GR2Q Tetraodon nigroviridis full-length cDNA Length = 1294 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1124 tcgacaccacctccaagtttggtcacggacgcttccagacc 1164
>emb|CR730734.2|CNS0GQS3 Tetraodon nigroviridis full-length cDNA Length = 1361 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1241 tcgacaccacctccaagtttggtcacggacgcttccagacc 1281
>emb|CR730522.2|CNS0GQM7 Tetraodon nigroviridis full-length cDNA Length = 1245 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1125 tcgacaccacctccaagtttggtcacggacgcttccagacc 1165
>emb|CR730377.2|CNS0GQI6 Tetraodon nigroviridis full-length cDNA Length = 1298 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1129 tcgacaccacctccaagtttggtcacggacgcttccagacc 1169
>emb|CR729847.2|CNS0GQ3H Tetraodon nigroviridis full-length cDNA Length = 1268 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1101 tcgacaccacctccaagtttggtcacggacgcttccagacc 1141
>emb|CR729749.2|CNS0GQ0R Tetraodon nigroviridis full-length cDNA Length = 1410 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1285 tcgacaccacctccaagtttggtcacggacgcttccagacc 1325
>emb|CR729626.2|CNS0GPXC Tetraodon nigroviridis full-length cDNA Length = 1296 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1129 tcgacaccacctccaagtttggtcacggacgcttccagacc 1169
>emb|CR729512.2|CNS0GPU6 Tetraodon nigroviridis full-length cDNA Length = 1262 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1103 tcgacaccacctccaagtttggtcacggacgcttccagacc 1143
>emb|CR729422.2|CNS0GPRO Tetraodon nigroviridis full-length cDNA Length = 1296 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1129 tcgacaccacctccaagtttggtcacggacgcttccagacc 1169
>emb|CR729497.1|CNS0GPTR Tetraodon nigroviridis full-length cDNA Length = 1763 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagaccaccgacgagaag 387 |||||||| | ||||||||||| |||| || ||||||||| |||| |||||| Sbjct: 1608 tcgacaccacctccaagtttggttacggacgcttccagaccgccgaggagaag 1660
>emb|CR728698.1|CNS0GP7K Tetraodon nigroviridis full-length cDNA Length = 1371 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttcca 371 |||||||| | ||||||||||| |||||||| ||||| Sbjct: 1159 tcgacaccacctccaagtttggtcacggccgcttcca 1195
>emb|CR728335.2|CNS0GOXH Tetraodon nigroviridis full-length cDNA Length = 1215 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1102 tcgacaccacctccaagtttggtcacggacgcttccagacc 1142
>emb|CR728163.2|CNS0GOSP Tetraodon nigroviridis full-length cDNA Length = 1508 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1340 tcgacaccacctccaagtttggtcacggacgcttccagacc 1380
>emb|CR727802.2|CNS0GOIO Tetraodon nigroviridis full-length cDNA Length = 1050 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 890 tcgacaccacctccaagtttggtcacggacgcttccagacc 930
>emb|CR727739.2|CNS0GOGX Tetraodon nigroviridis full-length cDNA Length = 1287 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1129 tcgacaccacctccaagtttggtcacggacgcttccagacc 1169
>emb|CR727559.2|CNS0GOBX Tetraodon nigroviridis full-length cDNA Length = 1268 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1100 tcgacaccacctccaagtttggtcacggacgcttccagacc 1140
>emb|CR726672.2|CNS0GNNA Tetraodon nigroviridis full-length cDNA Length = 1251 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1131 tcgacaccacctccaagtttggtcacggacgcttccagacc 1171
>gb|BC042242.1| Xenopus laevis ribosomal protein L3, mRNA (cDNA clone MGC:53999 IMAGE:5571281), complete cds Length = 1308 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 tccaagtttgggcacggccgtttccagac 374 |||||||||||||| || ||||||||||| Sbjct: 1122 tccaagtttgggcatggtcgtttccagac 1150 Score = 40.1 bits (20), Expect = 7.9 Identities = 50/60 (83%) Strand = Plus / Plus Query: 55 gctggtcagaatggataccaccatcggactgagatgaacaagaaggtgtacaagattggc 114 ||||| ||||| ||||||||||| || || ||||| ||||| ||| | ||||| |||||| Sbjct: 813 gctggacagaagggataccaccaccgtacagagattaacaaaaagatttacaaaattggc 872
>emb|CR726259.2|CNS0GNBT Tetraodon nigroviridis full-length cDNA Length = 1276 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1131 tcgacaccacctccaagtttggtcacggacgcttccagacc 1171
>emb|CR725665.2|CNS0GMVB Tetraodon nigroviridis full-length cDNA Length = 1284 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1126 tcgacaccacctccaagtttggtcacggacgcttccagacc 1166
>emb|CR720278.2|CNS0GIPO Tetraodon nigroviridis full-length cDNA Length = 1270 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1101 tcgacaccacctccaagtttggtcacggacgcttccagacc 1141
>emb|CR720250.2|CNS0GIOW Tetraodon nigroviridis full-length cDNA Length = 1299 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1129 tcgacaccacctccaagtttggtcacggacgcttccagacc 1169
>emb|CR720114.2|CNS0GIL4 Tetraodon nigroviridis full-length cDNA Length = 1297 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1128 tcgacaccacctccaagtttggtcacggacgcttccagacc 1168
>emb|CR720087.2|CNS0GIKD Tetraodon nigroviridis full-length cDNA Length = 1297 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1127 tcgacaccacctccaagtttggtcacggacgcttccagacc 1167
>emb|CR725089.2|CNS0GMFB Tetraodon nigroviridis full-length cDNA Length = 1373 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttcca 371 |||||||| | ||||||||||| |||||||| ||||| Sbjct: 1171 tcgacaccacctccaagtttggtcacggccgcttcca 1207
>emb|CR724703.1|CNS0GM4L Tetraodon nigroviridis full-length cDNA Length = 1297 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1128 tcgacaccacctccaagtttggtcacggacgcttccagacc 1168
>emb|CR724389.2|CNS0GLVV Tetraodon nigroviridis full-length cDNA Length = 1395 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttcca 371 |||||||| | ||||||||||| |||||||| ||||| Sbjct: 1170 tcgacaccacctccaagtttggtcacggccgcttcca 1206
>emb|CR723819.2|CNS0GLG1 Tetraodon nigroviridis full-length cDNA Length = 1297 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1128 tcgacaccacctccaagtttggtcacggacgcttccagacc 1168
>emb|CR723359.2|CNS0GL39 Tetraodon nigroviridis full-length cDNA Length = 1248 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1128 tcgacaccacctccaagtttggtcacggacgcttccagacc 1168
>emb|CR722698.2|CNS0GKKW Tetraodon nigroviridis full-length cDNA Length = 582 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 416 tcgacaccacctccaagtttggtcacggacgcttccagacc 456
>emb|CR719753.2|CNS0GIB3 Tetraodon nigroviridis full-length cDNA Length = 1266 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1101 tcgacaccacctccaagtttggtcacggacgcttccagacc 1141
>emb|CR714008.2|CNS0GDVO Tetraodon nigroviridis full-length cDNA Length = 448 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 278 tcgacaccacctccaagtttggtcacggacgcttccagacc 318
>emb|CR709769.2|CNS0GALX Tetraodon nigroviridis full-length cDNA Length = 429 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 259 tcgacaccacctccaagtttggtcacggacgcttccagacc 299
>emb|CR707628.2|CNS0G8YG Tetraodon nigroviridis full-length cDNA Length = 1315 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1146 tcgacaccacctccaagtttggtcacggacgcttccagacc 1186
>emb|CR707262.2|CNS0G8OA Tetraodon nigroviridis full-length cDNA Length = 1371 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1202 tcgacaccacctccaagtttggtcacggacgcttccagacc 1242
>emb|CR704805.2|CNS0G6S1 Tetraodon nigroviridis full-length cDNA Length = 1262 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1101 tcgacaccacctccaagtttggtcacggacgcttccagacc 1141
>emb|CR704073.2|CNS0G67P Tetraodon nigroviridis full-length cDNA Length = 1241 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1101 tcgacaccacctccaagtttggtcacggacgcttccagacc 1141
>emb|CR703969.2|CNS0G64T Tetraodon nigroviridis full-length cDNA Length = 1272 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1104 tcgacaccacctccaagtttggtcacggacgcttccagacc 1144
>emb|CR703349.2|CNS0G5NL Tetraodon nigroviridis full-length cDNA Length = 1241 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1096 tcgacaccacctccaagtttggtcacggacgcttccagacc 1136
>emb|CR702875.2|CNS0G5AF Tetraodon nigroviridis full-length cDNA Length = 1272 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1102 tcgacaccacctccaagtttggtcacggacgcttccagacc 1142
>emb|CR702501.2|CNS0G501 Tetraodon nigroviridis full-length cDNA Length = 1269 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1101 tcgacaccacctccaagtttggtcacggacgcttccagacc 1141
>emb|CR701395.2|CNS0G45B Tetraodon nigroviridis full-length cDNA Length = 1260 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1101 tcgacaccacctccaagtttggtcacggacgcttccagacc 1141
>emb|CR701010.2|CNS0G3UM Tetraodon nigroviridis full-length cDNA Length = 1297 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1130 tcgacaccacctccaagtttggtcacggacgcttccagacc 1170
>emb|CR701109.1|CNS0G3XD Tetraodon nigroviridis full-length cDNA Length = 1295 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1127 tcgacaccacctccaagtttggtcacggacgcttccagacc 1167
>emb|CR700841.2|CNS0G3PX Tetraodon nigroviridis full-length cDNA Length = 1249 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1101 tcgacaccacctccaagtttggtcacggacgcttccagacc 1141
>emb|CR700122.2|CNS0G35Y Tetraodon nigroviridis full-length cDNA Length = 1162 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 997 tcgacaccacctccaagtttggtcacggacgcttccagacc 1037
>emb|CR691378.2|CNS0FWF2 Tetraodon nigroviridis full-length cDNA Length = 1298 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1128 tcgacaccacctccaagtttggtcacggacgcttccagacc 1168
>emb|CR691337.2|CNS0FWDX Tetraodon nigroviridis full-length cDNA Length = 1270 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 335 tcgacacctcttccaagtttgggcacggccgtttccagacc 375 |||||||| | ||||||||||| ||||| || ||||||||| Sbjct: 1102 tcgacaccacctccaagtttggtcacggacgcttccagacc 1142 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,607,082 Number of Sequences: 3902068 Number of extensions: 4607082 Number of successful extensions: 86711 Number of sequences better than 10.0: 549 Number of HSP's better than 10.0 without gapping: 549 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85796 Number of HSP's gapped (non-prelim): 889 length of query: 579 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 556 effective length of database: 17,143,297,704 effective search space: 9531673523424 effective search space used: 9531673523424 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
