ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags24j10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065664.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
3dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
4emb|X66860.1|SOCYSK S.oleracea cysk mRNA for O-acetylserine(thio... 60 9e-06
5dbj|D14722.1|SPICYSSY Spinacia oleracea mRNA for chloroplast cys... 60 9e-06
6gb|L05184.1|SPIOACET Spinacia oleracea chlorplast O-acetylserine... 60 9e-06
7gb|AY112530.1| Zea mays CL5251_1 mRNA sequence 56 1e-04
8dbj|AB029511.2| Solanum tuberosum PCS-1 mRNA for cytosolic cyste... 50 0.009
9gb|AF044172.1|AF044172 Solanum tuberosum cysteine synthase mRNA,... 50 0.009
10ref|NM_115838.3| Arabidopsis thaliana OASC; cysteine synthase AT... 48 0.034
11ref|NM_180691.1| Arabidopsis thaliana OASC; cysteine synthase AT... 48 0.034
12emb|AJ271727.1|ATH271727 Arabidopsis thaliana partial mRNA for O... 48 0.034
13gb|AY128885.1| Arabidopsis thaliana cysteine synthase (At3g59760... 48 0.034
14gb|AY099721.1| Arabidopsis thaliana cysteine synthase (At3g59760... 48 0.034
15dbj|AK220762.1| Arabidopsis thaliana mRNA for cysteine synthase,... 48 0.034
16emb|BX823399.1|CNS0A6L6 Arabidopsis thaliana Full-length cDNA Co... 48 0.034
17gb|AY766093.1| Allium sativum chloroplast cysteine synthase GCS2... 44 0.53
18gb|AC018618.5|AC018618 Homo sapiens chromosome 15, clone RP11-16... 44 0.53
19emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chr... 44 0.53
20gb|AC122876.4| Mus musculus BAC clone RP23-113K14 from 3, comple... 42 2.1
21gb|AC119847.12| Mus musculus chromosome 3, clone RP23-46L5, comp... 42 2.1
22emb|AJ299249.1|NTA299249 Nicotiana tabacum mRNA for cysteine syn... 42 2.1
23gb|AC008212.8|AC008212 Drosophila melanogaster, chromosome 3R, r... 42 2.1
24gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94... 42 2.1
25dbj|AB040503.1| Allium tuberosum Bsas1 mRNA for cysteine synthas... 42 2.1
26ref|NM_180692.1| Arabidopsis thaliana OASC; cysteine synthase AT... 40 8.2
27ref|NM_189518.1| Oryza sativa (japonica cultivar-group), predic... 40 8.2
28gb|U41010.2| Caenorhabditis elegans cosmid T05A12, complete sequ... 40 8.2
29gb|AC163894.2| Glomus intraradices clone JGIATSX-9F17, complete ... 40 8.2
30gb|AC125528.4| Mus musculus BAC clone RP23-365I9 from chromosome... 40 8.2
31gb|AC074085.7| Homo sapiens BAC clone RP11-3L10 from 7, complete... 40 8.2
32gb|AC134521.41| Medicago truncatula clone mth2-31k24, complete s... 40 8.2
33gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete s... 40 8.2
34emb|AL928596.5| Human DNA sequence from clone RP11-1037J10 on ch... 40 8.2
35emb|AL590110.11| Human DNA sequence from clone RP11-254O21 on ch... 40 8.2
36emb|CR932957.2| Medicago truncatula chromosome 5 clone mth2-58c3... 40 8.2
37emb|BX950854.12| Zebrafish DNA sequence from clone CH211-125M22,... 40 8.2
38gb|AC007187.5| Arabidopsis thaliana chromosome 2 clone F7E22 map... 40 8.2
39ref|NM_068658.3| Caenorhabditis elegans T05A12.3 (T05A12.3) mRNA... 40 8.2
40dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
41gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosom... 40 8.2
42dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
43dbj|AP002062.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 8.2
44dbj|AK104704.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.2
45dbj|AK099217.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.2
46dbj|AK065652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.2
47dbj|AK065007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.2
48dbj|D28777.1|CNAPCCS7 Citrullus vulgaris mRNA for cysteine synth... 40 8.2
49gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.2
50emb|BX672566.2|CNS09SC4 Oryza sativa chromosome 12, . Partial se... 40 8.2
51gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 8.2
52dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 8.2
53gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 8.2
54dbj|D10476.1|SPIOAL Spinach mRNA for O-acetylserine(thiol)-lyase... 40 8.2 
>dbj|AK065664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039L03, full
            insert sequence
          Length = 1679

 Score =  232 bits (117), Expect = 1e-57
 Identities = 171/189 (90%)
 Strand = Plus / Plus

                                                                        
Query: 6    cttgcactaaaagagggcttgctggttggcatttcgtcaggtgctgcagcaattgctgct 65
            |||||||||||||||||| ||||||||||||||||||||||||||||  || ||||||||
Sbjct: 1091 cttgcactaaaagagggcctgctggttggcatttcgtcaggtgctgccacagttgctgct 1150

                                                                        
Query: 66   ataaacgtggccaaaagacctgaaaatgctggaaagctgattgccgttatcttccccagc 125
            || ||||| || |||||||||||||||||||||||  ||||||| ||||| |||||||||
Sbjct: 1151 attaacgtcgctaaaagacctgaaaatgctggaaaattgattgcggttattttccccagc 1210

                                                                        
Query: 126  tttggagagagatatatctctagcattttgttccgtccgatatacaactccgttcgaagg 185
            |||||||| |||||||||||||||||||| ||||||||||||||  |||| || ||||| 
Sbjct: 1211 tttggagaaagatatatctctagcattttattccgtccgatatatgactcggtccgaaga 1270

                     
Query: 186  atgaggaag 194
            |||||||||
Sbjct: 1271 atgaggaag 1279
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  103 bits (52), Expect = 7e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                            
Query: 111      gttatcttccccagctttggagagagatatatctctagcattttgttccgtccgatatac 170
                ||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 34640882 gttattttccccagctttggagaaagatatatctctagcattttattccgtccgatatat 34640823

                                        
Query: 171      aactccgttcgaaggatgaggaag 194
                 |||| || ||||| |||||||||
Sbjct: 34640822 gactcggtccgaagaatgaggaag 34640799



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                            
Query: 29       ggttggcatttcgtcaggtgctgcagcaattgctgctataaacgtggccaaaagacctga 88
                ||||||||||||||||||||||||  || |||||||||| ||||| || |||||||||||
Sbjct: 34641076 ggttggcatttcgtcaggtgctgccacagttgctgctattaacgtcgctaaaagacctga 34641017

                                     
Query: 89       aaatgctggaaagctgattgc 109
                ||||||||||||  |||||||
Sbjct: 34641016 aaatgctggaaaattgattgc 34640996



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 6        cttgcactaaaagagggcttgctggt 31
                |||||||||||||||||| |||||||
Sbjct: 34641460 cttgcactaaaagagggcctgctggt 34641435



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 78       aaaagacctgaaaatgctggaaag 101
                |||||||| |||||||||||||||
Sbjct: 43225022 aaaagaccagaaaatgctggaaag 43224999
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>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0085D07
          Length = 172483

 Score =  103 bits (52), Expect = 7e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                         
Query: 111   gttatcttccccagctttggagagagatatatctctagcattttgttccgtccgatatac 170
             ||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 92899 gttattttccccagctttggagaaagatatatctctagcattttattccgtccgatatat 92840

                                     
Query: 171   aactccgttcgaaggatgaggaag 194
              |||| || ||||| |||||||||
Sbjct: 92839 gactcggtccgaagaatgaggaag 92816



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                         
Query: 29    ggttggcatttcgtcaggtgctgcagcaattgctgctataaacgtggccaaaagacctga 88
             ||||||||||||||||||||||||  || |||||||||| ||||| || |||||||||||
Sbjct: 93093 ggttggcatttcgtcaggtgctgccacagttgctgctattaacgtcgctaaaagacctga 93034

                                  
Query: 89    aaatgctggaaagctgattgc 109
             ||||||||||||  |||||||
Sbjct: 93033 aaatgctggaaaattgattgc 93013



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 6     cttgcactaaaagagggcttgctggt 31
             |||||||||||||||||| |||||||
Sbjct: 93477 cttgcactaaaagagggcctgctggt 93452
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>emb|X66860.1|SOCYSK S.oleracea cysk mRNA for O-acetylserine(thiol) lyase
          Length = 1432

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 78   aaaagacctgaaaatgctggaaagctgattgccgttatcttccccagctttggagagaga 137
            ||||||||||||||||| ||||| || ||||| ||| | ||||| |||||||| ||||||
Sbjct: 1083 aaaagacctgaaaatgcaggaaaacttattgctgttgtgttcccaagctttggtgagaga 1142

              
Query: 138  ta 139
            ||
Sbjct: 1143 ta 1144
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>dbj|D14722.1|SPICYSSY Spinacia oleracea mRNA for chloroplast cysteine synthase, complete
            cds
          Length = 1484

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 78   aaaagacctgaaaatgctggaaagctgattgccgttatcttccccagctttggagagaga 137
            ||||||||||||||||| ||||| || ||||| ||| | ||||| |||||||| ||||||
Sbjct: 1091 aaaagacctgaaaatgcaggaaaacttattgctgttgtgttcccaagctttggtgagaga 1150

              
Query: 138  ta 139
            ||
Sbjct: 1151 ta 1152
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>gb|L05184.1|SPIOACET Spinacia oleracea chlorplast O-acetylserine-(thiol)-lyase mRNA,
            complete cds
          Length = 1446

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 78   aaaagacctgaaaatgctggaaagctgattgccgttatcttccccagctttggagagaga 137
            ||||||||||||||||| ||||| || ||||| ||| | ||||| |||||||| ||||||
Sbjct: 1090 aaaagacctgaaaatgcaggaaaacttattgctgttgtgttcccaagctttggtgagaga 1149

              
Query: 138  ta 139
            ||
Sbjct: 1150 ta 1151
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>gb|AY112530.1| Zea mays CL5251_1 mRNA sequence
          Length = 1258

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 59  tgctgctataaacgtggccaaaagacctgaaaatgctggaaagctgat 106
           |||||| ||||| || ||||||||||| || |||||||||||||||||
Sbjct: 819 tgctgccataaaggttgccaaaagaccagagaatgctggaaagctgat 866
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>dbj|AB029511.2| Solanum tuberosum PCS-1 mRNA for cytosolic cysteine synthase,
           complete cds
          Length = 1354

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 84  cctgaaaatgctggaaagctgattgccgttatcttccccagctttggagagagatat 140
           |||||||||||||| ||||| ||||  ||||| ||||| ||||| |||||| |||||
Sbjct: 943 cctgaaaatgctgggaagctcattgttgttattttcccaagcttcggagagcgatat 999
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>gb|AF044172.1|AF044172 Solanum tuberosum cysteine synthase mRNA, complete cds
          Length = 1308

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 84  cctgaaaatgctggaaagctgattgccgttatcttccccagctttggagagagatat 140
           |||||||||||||| ||||| ||||  ||||| ||||| ||||| |||||| |||||
Sbjct: 893 cctgaaaatgctgggaagctcattgttgttattttcccaagcttcggagagcgatat 949
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>ref|NM_115838.3| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC)
            transcript variant AT3G59760.3 mRNA, complete cds
          Length = 1558

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 96/120 (80%)
 Strand = Plus / Plus

                                                                        
Query: 21   ggcttgctggttggcatttcgtcaggtgctgcagcaattgctgctataaacgtggccaaa 80
            |||||| ||||||| || || || || ||||||||   |||||| || || ||||| || 
Sbjct: 1182 ggcttgatggttggtatatcatctggagctgcagctgctgctgcaatcaaggtggctaag 1241

                                                                        
Query: 81   agacctgaaaatgctggaaagctgattgccgttatcttccccagctttggagagagatat 140
            |||||||| ||||||||||| || || || ||| | ||||| ||||| || |||||||||
Sbjct: 1242 agacctgagaatgctggaaaactcatagctgttgttttcccgagcttcggggagagatat 1301
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>ref|NM_180691.1| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC)
            transcript variant AT3G59760.1 mRNA, complete cds
          Length = 1544

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 96/120 (80%)
 Strand = Plus / Plus

                                                                        
Query: 21   ggcttgctggttggcatttcgtcaggtgctgcagcaattgctgctataaacgtggccaaa 80
            |||||| ||||||| || || || || ||||||||   |||||| || || ||||| || 
Sbjct: 1182 ggcttgatggttggtatatcatctggagctgcagctgctgctgcaatcaaggtggctaag 1241

                                                                        
Query: 81   agacctgaaaatgctggaaagctgattgccgttatcttccccagctttggagagagatat 140
            |||||||| ||||||||||| || || || ||| | ||||| ||||| || |||||||||
Sbjct: 1242 agacctgagaatgctggaaaactcatagctgttgttttcccgagcttcggggagagatat 1301
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>emb|AJ271727.1|ATH271727 Arabidopsis thaliana partial mRNA for O-acetylserine (thiol) lyase
            (oasC gene)
          Length = 1377

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 96/120 (80%)
 Strand = Plus / Plus

                                                                        
Query: 21   ggcttgctggttggcatttcgtcaggtgctgcagcaattgctgctataaacgtggccaaa 80
            |||||| ||||||| || || || || ||||||||   |||||| || || ||||| || 
Sbjct: 982  ggcttgatggttggtatatcatctggagctgcagctgctgctgcaatcaaggtggctaag 1041

                                                                        
Query: 81   agacctgaaaatgctggaaagctgattgccgttatcttccccagctttggagagagatat 140
            |||||||| ||||||||||| || || || ||| | ||||| ||||| || |||||||||
Sbjct: 1042 agacctgagaatgctggaaaactcatagctgttgttttcccgagcttcggggagagatat 1101
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>gb|AY128885.1| Arabidopsis thaliana cysteine synthase (At3g59760) mRNA, complete cds
          Length = 1460

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 96/120 (80%)
 Strand = Plus / Plus

                                                                        
Query: 21   ggcttgctggttggcatttcgtcaggtgctgcagcaattgctgctataaacgtggccaaa 80
            |||||| ||||||| || || || || ||||||||   |||||| || || ||||| || 
Sbjct: 1111 ggcttgatggttggtatatcatctggagctgcagctgctgctgcaatcaaggtggctaag 1170

                                                                        
Query: 81   agacctgaaaatgctggaaagctgattgccgttatcttccccagctttggagagagatat 140
            |||||||| ||||||||||| || || || ||| | ||||| ||||| || |||||||||
Sbjct: 1171 agacctgagaatgctggaaaactcatagctgttgttttcccgagcttcggggagagatat 1230
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>gb|AY099721.1| Arabidopsis thaliana cysteine synthase (At3g59760) mRNA, complete cds
          Length = 1556

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 96/120 (80%)
 Strand = Plus / Plus

                                                                        
Query: 21   ggcttgctggttggcatttcgtcaggtgctgcagcaattgctgctataaacgtggccaaa 80
            |||||| ||||||| || || || || ||||||||   |||||| || || ||||| || 
Sbjct: 1181 ggcttgatggttggtatatcatctggagctgcagctgctgctgcaatcaaggtggctaag 1240

                                                                        
Query: 81   agacctgaaaatgctggaaagctgattgccgttatcttccccagctttggagagagatat 140
            |||||||| ||||||||||| || || || ||| | ||||| ||||| || |||||||||
Sbjct: 1241 agacctgagaatgctggaaaactcatagctgttgttttcccgagcttcggggagagatat 1300
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>dbj|AK220762.1| Arabidopsis thaliana mRNA for cysteine synthase, complete cds,
           clone: RAFL22-19-B22
          Length = 850

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 96/120 (80%)
 Strand = Plus / Plus

                                                                       
Query: 21  ggcttgctggttggcatttcgtcaggtgctgcagcaattgctgctataaacgtggccaaa 80
           |||||| ||||||| || || || || ||||||||   |||||| || || ||||| || 
Sbjct: 468 ggcttgatggttggtatatcatctggagctgcagctgctgctgcaatcaaggtggctaag 527

                                                                       
Query: 81  agacctgaaaatgctggaaagctgattgccgttatcttccccagctttggagagagatat 140
           |||||||| ||||||||||| || || || ||| | ||||| ||||| || |||||||||
Sbjct: 528 agacctgagaatgctggaaaactcatagctgttgttttcccgagcttcggggagagatat 587
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>emb|BX823399.1|CNS0A6L6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS32ZE09 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1500

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 96/120 (80%)
 Strand = Plus / Plus

                                                                        
Query: 21   ggcttgctggttggcatttcgtcaggtgctgcagcaattgctgctataaacgtggccaaa 80
            |||||| ||||||| || || || || ||||||||   |||||| || || ||||| || 
Sbjct: 1149 ggcttgatggttggtatatcatctggagctgcagctgctgctgcaatcaaggtggctaag 1208

                                                                        
Query: 81   agacctgaaaatgctggaaagctgattgccgttatcttccccagctttggagagagatat 140
            |||||||| ||||||||||| || || || ||| | ||||| ||||| || |||||||||
Sbjct: 1209 agacctgagaatgctggaaaactcatagctgttgttttcccgagcttcggggagagatat 1268
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>gb|AY766093.1| Allium sativum chloroplast cysteine synthase GCS2 (gcs2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1424

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                        
Query: 59   tgctgctataaacgtggccaaaagacctgaaaatgctggaaagctgattgccgttatctt 118
            ||||||||| || || || ||||||||||||||||| || || || ||  | ||| ||||
Sbjct: 1043 tgctgctatgaaagtcgcaaaaagacctgaaaatgcagggaaactcataacggttgtctt 1102

                                  
Query: 119  ccccagctttggagagagatat 140
            ||| |||||||| || ||||||
Sbjct: 1103 cccaagctttggtgaaagatat 1124
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>gb|AC018618.5|AC018618 Homo sapiens chromosome 15, clone RP11-162I7, complete sequence
          Length = 156542

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 343  gctgccgagtgggcttcagcac 364
            ||||||||||||||||||||||
Sbjct: 9143 gctgccgagtgggcttcagcac 9122
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>emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chromosome 2, complete
             sequence
          Length = 183985

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 530   ttgtcatctgatatttgactga 551
             ||||||||||||||||||||||
Sbjct: 10470 ttgtcatctgatatttgactga 10491
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>gb|AC122876.4| Mus musculus BAC clone RP23-113K14 from 3, complete sequence
          Length = 190123

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 542    atttgactgatcttactaaat 562
              |||||||||||||||||||||
Sbjct: 159368 atttgactgatcttactaaat 159388
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>gb|AC119847.12| Mus musculus chromosome 3, clone RP23-46L5, complete sequence
          Length = 227081

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 542   atttgactgatcttactaaat 562
             |||||||||||||||||||||
Sbjct: 34376 atttgactgatcttactaaat 34396
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>emb|AJ299249.1|NTA299249 Nicotiana tabacum mRNA for cysteine synthase (cs1 gene), clone 4T7
          Length = 1493

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 99/125 (79%)
 Strand = Plus / Plus

                                                                       
Query: 6   cttgcactaaaagagggcttgctggttggcatttcgtcaggtgctgcagcaattgctgct 65
           |||||| | ||||| || |||||||| || || ||||| || ||||||||   ||| || 
Sbjct: 865 cttgcattgaaagaaggtttgctggtaggaatatcgtcgggggctgcagctgctgcagcg 924

                                                                       
Query: 66  ataaacgtggccaaaagacctgaaaatgctggaaagctgattgccgttatcttccccagc 125
           ||||| || || ||||  || ||||||||||| || || ||||| ||||||||||| || 
Sbjct: 925 ataaaagtagcaaaaaagccagaaaatgctgggaaactcattgcggttatcttccctagt 984

                
Query: 126 tttgg 130
           |||||
Sbjct: 985 tttgg 989
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>gb|AC008212.8|AC008212 Drosophila melanogaster, chromosome 3R, region 97A-97B, BAC clone
             BACR19L21, complete sequence
          Length = 162876

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 380   ccataaaaaaccgagggaagg 400
             |||||||||||||||||||||
Sbjct: 48442 ccataaaaaaccgagggaagg 48462
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>gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94 of 118 of the
             complete sequence
          Length = 322332

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 380   ccataaaaaaccgagggaagg 400
             |||||||||||||||||||||
Sbjct: 22289 ccataaaaaaccgagggaagg 22309
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>dbj|AB040503.1| Allium tuberosum Bsas1 mRNA for cysteine synthase, complete cds
          Length = 1671

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                         
Query: 96   ggaaagctgattgccgttatcttccccagctttggagagagatat 140
            ||||| |||||||  ||| |||||||||||||||| ||| |||||
Sbjct: 1287 ggaaaactgattgtggttgtcttccccagctttggcgagcgatat 1331



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 36   atttcgtcaggtgctgcagcaattgctgctat 67
            |||||||| || ||||| ||||||||||||||
Sbjct: 1227 atttcgtctggagctgctgcaattgctgctat 1258
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>ref|NM_180692.1| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC)
            transcript variant AT3G59760.2 mRNA, complete cds
          Length = 1553

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                        
Query: 21   ggcttgctggttggcatttcgtcaggtgctgcagcaattgctgctataaacgtggccaaa 80
            |||||| ||||||| || || || || ||||||||   |||||| || || ||||| || 
Sbjct: 1182 ggcttgatggttggtatatcatctggagctgcagctgctgctgcaatcaaggtggctaag 1241

                                
Query: 81   agacctgaaaatgctggaaa 100
            |||||||| |||||||||||
Sbjct: 1242 agacctgagaatgctggaaa 1261
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>ref|NM_189518.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1230

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 78   aaaagacctgaaaatgctggaaag 101
            |||||||| |||||||||||||||
Sbjct: 1105 aaaagaccagaaaatgctggaaag 1128
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>gb|U41010.2| Caenorhabditis elegans cosmid T05A12, complete sequence
          Length = 25228

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    caggtgctgcagcaattgct 62
             ||||||||||||||||||||
Sbjct: 13375 caggtgctgcagcaattgct 13394
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>gb|AC163894.2| Glomus intraradices clone JGIATSX-9F17, complete sequence
          Length = 37905

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 16   aagagggcttgctggttggcatttcgtc 43
            |||||||||||||||| ||||| |||||
Sbjct: 6837 aagagggcttgctggtcggcatctcgtc 6864
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>gb|AC125528.4| Mus musculus BAC clone RP23-365I9 from chromosome 15, complete
            sequence
          Length = 197376

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 257  cataacacatcaagcagggcagca 280
            ||||||||||||||||||| ||||
Sbjct: 1220 cataacacatcaagcagggaagca 1197
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>gb|AC074085.7| Homo sapiens BAC clone RP11-3L10 from 7, complete sequence
          Length = 155260

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 68    aaacgtggccaaaagacctgaaaa 91
             |||| |||||||||||||||||||
Sbjct: 19507 aaacatggccaaaagacctgaaaa 19484
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>gb|AC134521.41| Medicago truncatula clone mth2-31k24, complete sequence
          Length = 132267

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 405    atcatgagttgttgtatgttatct 428
              |||||||| |||||||||||||||
Sbjct: 109919 atcatgagatgttgtatgttatct 109896
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>gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete sequence
          Length = 113836

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 405   atcatgagttgttgtatgttatct 428
             |||||||| |||||||||||||||
Sbjct: 35349 atcatgagatgttgtatgttatct 35372
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>emb|AL928596.5| Human DNA sequence from clone RP11-1037J10 on chromosome X, complete
             sequence
          Length = 64394

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 266   tcaagcagggcagcattgtagaaa 289
             ||||||||||||| ||||||||||
Sbjct: 38620 tcaagcagggcagtattgtagaaa 38643
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>emb|AL590110.11| Human DNA sequence from clone RP11-254O21 on chromosome 1 Contains the
             3' end of a novel gene, complete sequence
          Length = 128843

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   gagagatatatctctagcat 151
             ||||||||||||||||||||
Sbjct: 22339 gagagatatatctctagcat 22320
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>emb|CR932957.2| Medicago truncatula chromosome 5 clone mth2-58c3, COMPLETE SEQUENCE
          Length = 136080

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 405    atcatgagttgttgtatgttatct 428
              |||||||| |||||||||||||||
Sbjct: 114744 atcatgagatgttgtatgttatct 114721
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>emb|BX950854.12| Zebrafish DNA sequence from clone CH211-125M22, complete sequence
          Length = 171896

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    attgtagaaatgctctggca 299
              ||||||||||||||||||||
Sbjct: 171030 attgtagaaatgctctggca 171049
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>gb|AC007187.5| Arabidopsis thaliana chromosome 2 clone F7E22 map mi421, complete
             sequence
          Length = 98432

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   caagcagggcagcattgtag 286
             ||||||||||||||||||||
Sbjct: 47238 caagcagggcagcattgtag 47257
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>ref|NM_068658.3| Caenorhabditis elegans T05A12.3 (T05A12.3) mRNA, complete cds
          Length = 2325

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 43   caggtgctgcagcaattgct 62
            ||||||||||||||||||||
Sbjct: 1288 caggtgctgcagcaattgct 1269
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 413      ttgttgtatgttatctgcct 432
                ||||||||||||||||||||
Sbjct: 16244271 ttgttgtatgttatctgcct 16244252
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>gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosome 15, complete
             sequence
          Length = 177253

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 257   cataacacatcaagcagggcagca 280
             ||||||||||||||||||| ||||
Sbjct: 90137 cataacacatcaagcagggaagca 90114
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>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0020E09
          Length = 149195

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 78     aaaagacctgaaaatgctggaaag 101
              |||||||| |||||||||||||||
Sbjct: 112477 aaaagaccagaaaatgctggaaag 112454
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>dbj|AP002062.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T22B15
          Length = 112406

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    caagcagggcagcattgtag 286
              ||||||||||||||||||||
Sbjct: 104683 caagcagggcagcattgtag 104702
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>dbj|AK104704.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-D03, full
            insert sequence
          Length = 1555

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 78   aaaagacctgaaaatgctggaaag 101
            |||||||| |||||||||||||||
Sbjct: 1103 aaaagaccagaaaatgctggaaag 1126
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>dbj|AK099217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079H24, full
            insert sequence
          Length = 1562

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 78   aaaagacctgaaaatgctggaaag 101
            |||||||| |||||||||||||||
Sbjct: 1114 aaaagaccagaaaatgctggaaag 1137
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>dbj|AK065652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035B06, full
            insert sequence
          Length = 2104

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 78   aaaagacctgaaaatgctggaaag 101
            |||||||| |||||||||||||||
Sbjct: 1645 aaaagaccagaaaatgctggaaag 1668
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>dbj|AK065007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E19, full
            insert sequence
          Length = 1602

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 78   aaaagacctgaaaatgctggaaag 101
            |||||||| |||||||||||||||
Sbjct: 1151 aaaagaccagaaaatgctggaaag 1174
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>dbj|D28777.1|CNAPCCS7 Citrullus vulgaris mRNA for cysteine synthase, complete cds
          Length = 1855

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 81   agacctgaaaatgctggaaagctgattg 108
            ||||| ||||||||||||||||| ||||
Sbjct: 1419 agaccagaaaatgctggaaagcttattg 1446
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 413      ttgttgtatgttatctgcct 432
                ||||||||||||||||||||
Sbjct: 16197504 ttgttgtatgttatctgcct 16197485
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>emb|BX672566.2|CNS09SC4 Oryza sativa chromosome 12, . Partial sequence from BAC B1004E12 of
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 24190

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   ttgttgtatgttatctgcct 432
             ||||||||||||||||||||
Sbjct: 14126 ttgttgtatgttatctgcct 14107
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 4       tgcttgcactaaaagagggc 23
               ||||||||||||||||||||
Sbjct: 1810071 tgcttgcactaaaagagggc 1810090
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 4       tgcttgcactaaaagagggc 23
               ||||||||||||||||||||
Sbjct: 1718135 tgcttgcactaaaagagggc 1718154
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 4       tgcttgcactaaaagagggc 23
               ||||||||||||||||||||
Sbjct: 1174588 tgcttgcactaaaagagggc 1174607
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>dbj|D10476.1|SPIOAL Spinach mRNA for O-acetylserine(thiol)-lyase, complete cds
          Length = 1281

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 83/104 (79%)
 Strand = Plus / Plus

                                                                       
Query: 27  ctggttggcatttcgtcaggtgctgcagcaattgctgctataaacgtggccaaaagacct 86
           |||||||| ||||| || |||||||| ||    ||||| || || ||||| || || |||
Sbjct: 853 ctggttgggatttcatctggtgctgctgctgccgctgccattaaagtggcaaagaggcct 912

                                                       
Query: 87  gaaaatgctggaaagctgattgccgttatcttccccagctttgg 130
           |||||||||||||| || || | || | |||| |||||||||||
Sbjct: 913 gaaaatgctggaaaactcatcgtcgctgtctttcccagctttgg 956


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,044,831
Number of Sequences: 3902068
Number of extensions: 5044831
Number of successful extensions: 89095
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 88830
Number of HSP's gapped (non-prelim): 266
length of query: 605
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 582
effective length of database: 17,143,297,704
effective search space: 9977399263728
effective search space used: 9977399263728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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