ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags24i24 |
|---|---|
| Clone Library Name | barley_pub |
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 263 bits (672), Expect = 3e-70 Identities = 120/137 (87%), Positives = 131/137 (95%) Frame = +3 Query: 3 YSGVPWFEAGAQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRT 182 +SG+PWFEAGA PGA+APFSFG+LLGTQL+LMGWVESKRWVDFF+PDSQSVEWATPWS+T Sbjct: 120 WSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKT 179 Query: 183 AENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLI 362 AENFANFTGEQGYPGGKFFDPL L G +G+Y+PDTEKLERLKVAEIKH+RLAMLAMLI Sbjct: 180 AENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLI 239 Query: 363 FYFEAGQGKTPLGALGL 413 FYFEAGQGKTPLGALGL Sbjct: 240 FYFEAGQGKTPLGALGL 256 Score = 30.4 bits (67), Expect = 3.9 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +3 Query: 222 PGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML-IFYFEAGQG 386 PG FDPLGLG D L+ + AE+ H R AM A+L IF +A G Sbjct: 76 PGDYGFDPLGLG---------KDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSG 122
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 260 bits (664), Expect = 2e-69 Identities = 119/137 (86%), Positives = 130/137 (94%) Frame = +3 Query: 3 YSGVPWFEAGAQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRT 182 +SG+PWFEAGA PGA+APFSFGSLLGTQLLLMGWVESKRWVDFF+ DSQS++WATPWS+T Sbjct: 120 WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKT 179 Query: 183 AENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLI 362 AENFANFTGEQGYPGGKFFDPL L G +G+Y+PDTEKLERLK+AEIKHSRLAMLAMLI Sbjct: 180 AENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLI 239 Query: 363 FYFEAGQGKTPLGALGL 413 FYFEAGQGKTPLGALGL Sbjct: 240 FYFEAGQGKTPLGALGL 256 Score = 30.0 bits (66), Expect = 5.1 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +3 Query: 222 PGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML-IFYFEAGQG 386 PG FDPLGLG D L+ + AE+ H R AM A+L IF +A G Sbjct: 76 PGDFGFDPLGLG---------KDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSG 122
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 255 bits (652), Expect = 6e-68 Identities = 118/137 (86%), Positives = 129/137 (94%) Frame = +3 Query: 3 YSGVPWFEAGAQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRT 182 ++G+PWFEAGA PGAVAPFSFG+LLGTQLLLMGWVESKRWVDFF+PDSQSVEWATPWSRT Sbjct: 125 WTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRT 184 Query: 183 AENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLI 362 AENF+N TGEQGYPGGKFFDPL L G +G+Y PDT+KLERLK+AEIKH+RLAMLAMLI Sbjct: 185 AENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLI 244 Query: 363 FYFEAGQGKTPLGALGL 413 FYFEAGQGKTPLGALGL Sbjct: 245 FYFEAGQGKTPLGALGL 261 Score = 32.3 bits (72), Expect = 1.0 Identities = 39/126 (30%), Positives = 50/126 (39%), Gaps = 11/126 (8%) Frame = +3 Query: 42 GAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATP------WSRTAENFANF 203 G +PF G +Q LL +V SK + V A W + NF Sbjct: 13 GFTSPFLSGGKKSSQSLL--FVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVKGGGNF 70 Query: 204 TGEQ----GYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML-IFY 368 + PG FDPLGLG D L+ + AE+ H R AMLA+L IF Sbjct: 71 LDPEWLDGSLPGDFGFDPLGLG---------KDPAFLKWYREAELIHGRWAMLAVLGIFV 121 Query: 369 FEAGQG 386 +A G Sbjct: 122 GQAWTG 127
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 65.9 bits (159), Expect = 8e-11 Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 9/140 (6%) Frame = +3 Query: 6 SGVPWFEAG--------AQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 +GV W +AG + G PFS +L+ ++L++G++E +R + DS+ Sbjct: 161 TGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAEL---DSE---- 213 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 ++ YPGGKFFDPLGL D EK +L++AEIKH+RL Sbjct: 214 ----------------KRLYPGGKFFDPLGLAA---------DPEKTAQLQLAEIKHARL 248 Query: 342 AMLAMLIFYFE-AGQGKTPL 398 AM+A L F + A GK PL Sbjct: 249 AMVAFLGFAVQAAATGKGPL 268
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 63.9 bits (154), Expect = 3e-10 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 9/143 (6%) Frame = +3 Query: 6 SGVPWFEAG--------AQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 +G+ W +AG + G PFS +L+ ++L++G++E +R + +P+ + Sbjct: 162 TGIAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSEL-DPEKRI--- 217 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG +FDPLGL D EKL+ LK+AEIKHSRL Sbjct: 218 -------------------YPGG-YFDPLGLAA---------DPEKLDTLKLAEIKHSRL 248 Query: 342 AMLAMLIFYFEAG-QGKTPLGAL 407 AM+A LIF +A GK P+ L Sbjct: 249 AMVAFLIFALQAAFTGKGPVSFL 271
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 62.8 bits (151), Expect = 7e-10 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 1/120 (0%) Frame = +3 Query: 18 WFEAGAQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFA 197 W+ AG Q +L +L+L+GW E +RW D P + + P ++ Sbjct: 138 WYTAGEQEYFT---DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNK------ 188 Query: 198 NFTG-EQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFE 374 TG + GYPGG +FDPLG G + K++ L+ EIK+ RLAMLA++ +F+ Sbjct: 189 -LTGTDVGYPGGLWFDPLGWGSGS--------PAKIKELRTKEIKNGRLAMLAVMGAWFQ 239 Score = 30.8 bits (68), Expect = 3.0 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 Query: 222 PGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAML 350 PG FDPLGLG D E L+ AE+ HSR AML Sbjct: 83 PGDFGFDPLGLGS---------DPESLKWNAQAELVHSRWAML 116
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 62.8 bits (151), Expect = 7e-10 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 1/120 (0%) Frame = +3 Query: 18 WFEAGAQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFA 197 W+ AG Q +L +L+L+GW E +RW D P + + P ++ Sbjct: 138 WYTAGEQEYFT---DTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNK------ 188 Query: 198 NFTG-EQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFE 374 TG + GYPGG +FDPLG G + K++ L+ EIK+ RLAMLA++ +F+ Sbjct: 189 -LTGTDVGYPGGLWFDPLGWGSGS--------PAKIKELRTKEIKNGRLAMLAVMGAWFQ 239
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 61.2 bits (147), Expect = 2e-09 Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 4/128 (3%) Frame = +3 Query: 6 SGVPWFEAGAQPGAVAPFSFGS----LLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPW 173 + + WF+ G P A +++ + L ++ LMG+ E +R+ D+ P S ++ Sbjct: 130 TALAWFQTGVIPPA-GTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLG- 187 Query: 174 SRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLA 353 E +G+ YPGG F+PLG G D + ++ LK+ EIK+ RLAMLA Sbjct: 188 ---LEKGLGGSGDPAYPGGPLFNPLGFG---------KDEKSMKELKLKEIKNGRLAMLA 235 Query: 354 MLIFYFEA 377 +L ++ +A Sbjct: 236 ILGYFIQA 243
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 61.2 bits (147), Expect = 2e-09 Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 9/140 (6%) Frame = +3 Query: 6 SGVPWFEAG--------AQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 +GV W +AG + G PFS +L+ ++L++G++E +R + DS+ Sbjct: 158 TGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAEL---DSE---- 210 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 ++ YPGGKFFDPLGL D K +L++AEIKH+RL Sbjct: 211 ----------------KRLYPGGKFFDPLGLAS---------DPVKKAQLQLAEIKHARL 245 Query: 342 AMLAMLIFYFE-AGQGKTPL 398 AM+ L F + A GK PL Sbjct: 246 AMVGFLGFAVQAAATGKGPL 265
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 53.5 bits (127), Expect = 4e-07 Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 15/142 (10%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++LG Q+LLMG VE R Sbjct: 132 WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRI------------- 178 Query: 162 ATPWSRTAENFANFTGEQG--YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHS 335 N + GE YPGG++FDPLGL D LKV EIK+ Sbjct: 179 ---------NGLDGVGEGNDLYPGGQYFDPLGLA---------DDPVTFAELKVKEIKNG 220 Query: 336 RLAMLAMLIFYFEA-GQGKTPL 398 RLAM +M F+ +A GK PL Sbjct: 221 RLAMFSMFGFFVQAIVTGKGPL 242
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 51.6 bits (122), Expect = 2e-06 Identities = 46/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++LG Q++LMG VE R Sbjct: 129 WFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGE----- 183 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 G YPGG++FDPLGL D LKV EIK+ RL Sbjct: 184 ---------------GNDLYPGGQYFDPLGLA---------DDPTTFAELKVKEIKNGRL 219 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 220 AMFSMFGFFVQAIVTGKGPL 239
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 50.8 bits (120), Expect = 3e-06 Identities = 46/142 (32%), Positives = 64/142 (45%), Gaps = 8/142 (5%) Frame = +3 Query: 6 SGVPWFEAG-------AQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWA 164 +GV W EAG + G PFS L+ +++L+G E R + NP+ + Sbjct: 157 TGVSWVEAGKVELDGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSET-NPEKRC---- 211 Query: 165 TPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLA 344 YPGG FDPL L E D E+ RLK AEIKH+RLA Sbjct: 212 ------------------YPGG-VFDPLKLASE--------DEERAFRLKTAEIKHARLA 244 Query: 345 MLAMLIFYFEA-GQGKTPLGAL 407 M++ + +A G+ LG+L Sbjct: 245 MVSFFGYGVQALSTGEGALGSL 266
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 47.8 bits (112), Expect = 2e-05 Identities = 47/140 (33%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S S+ TQ++LMG VE R P + V+ Sbjct: 129 WFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAG--GPLGEIVDP 186 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E+ LKV E+K+ RL Sbjct: 187 L------------------YPGGSF-DPLGLA---------EDPERSAELKVKELKNGRL 218 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 219 AMFSMFGFFVQAIVTGKGPL 238
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 47.8 bits (112), Expect = 2e-05 Identities = 47/140 (33%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ TQ++LMG VE R V Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR-----------VAG 178 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL D E LKV EIK+ RL Sbjct: 179 EGPLGEAEDLL--------YPGGSF-DPLGLA---------TDPEAFAELKVKEIKNGRL 220 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 221 AMFSMFGFFVQAIVTGKGPL 240
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 47.4 bits (111), Expect = 3e-05 Identities = 45/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P + S ++ TQ++LMG VE R Sbjct: 121 WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIA------------ 168 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL D E L LKV E+K+ RL Sbjct: 169 GGPLGEVTDPI--------YPGGSF-DPLGLAD---------DPEALAELKVKELKNGRL 210 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 211 AMFSMFGFFVQAIVTGKGPL 230
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 46.2 bits (108), Expect = 7e-05 Identities = 46/140 (32%), Positives = 59/140 (42%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ TQ++LMG VE R P + V+ Sbjct: 134 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVVDP 191 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV E+K+ RL Sbjct: 192 L------------------YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRL 223 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 224 AMFSMFGFFVQAIVTGKGPL 243
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 46.2 bits (108), Expect = 7e-05 Identities = 46/140 (32%), Positives = 59/140 (42%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ TQ++LMG VE R P + V+ Sbjct: 133 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVVDP 190 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV E+K+ RL Sbjct: 191 L------------------YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRL 222 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 223 AMFSMFGFFVQAIVTGKGPL 242
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 45.8 bits (107), Expect = 9e-05 Identities = 45/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ TQ++LMG VE R V Sbjct: 131 WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR-----------VAG 179 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL D E LKV E+K+ RL Sbjct: 180 NGPLGEAEDLL--------YPGGSF-DPLGLA---------TDPEAFAELKVKELKNGRL 221 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 222 AMFSMFGFFVQAIVTGKGPI 241
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 45.8 bits (107), Expect = 9e-05 Identities = 45/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ TQ++LMG VE R V Sbjct: 131 WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR-----------VAG 179 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL D E LKV E+K+ RL Sbjct: 180 NGPLGEAEDLL--------YPGGSF-DPLGLA---------TDPEAFAELKVKELKNGRL 221 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 222 AMFSMFGFFVQAIVTGKGPI 241
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 45.8 bits (107), Expect = 9e-05 Identities = 44/140 (31%), Positives = 57/140 (40%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P + S ++ TQ++LMG VE R Sbjct: 128 WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIA------------ 175 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL D E LKV E+K+ RL Sbjct: 176 GGPLGEVTDPI--------YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRL 217 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 218 AMFSMFGFFVQAIVTGKGPL 237
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 45.8 bits (107), Expect = 9e-05 Identities = 40/103 (38%), Positives = 48/103 (46%) Frame = +3 Query: 69 SLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANFTGEQGYPGGKFFDPL 248 ++L TQ+LLMG VE R TA ++ YPGG F DPL Sbjct: 13 AILATQVLLMGAVEGYRA-----------------GNTAPGQFGEDLDRLYPGGPF-DPL 54 Query: 249 GLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA 377 GL + PDT LKV EIK+ RLAM ML FY +A Sbjct: 55 GLADD-------PDT--FPELKVKEIKNGRLAMSGMLGFYAQA 88
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 45.4 bits (106), Expect = 1e-04 Identities = 47/140 (33%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AGAQ P V S ++ Q++LMG VE R Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA------------ 180 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL + PDT LKV EIK+ RL Sbjct: 181 GGPLGEVTDPI--------YPGGSF-DPLGLADD-------PDT--FAELKVKEIKNGRL 222 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 223 AMFSMFGFFVQAIVTGKGPL 242
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 45.1 bits (105), Expect = 2e-04 Identities = 45/140 (32%), Positives = 56/140 (40%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AGAQ P V S ++ Q++LMG VE R Sbjct: 139 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIA------------ 186 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL D E LKV EIK+ RL Sbjct: 187 GGPLGEVTDPI--------YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRL 228 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 229 AMFSMFGFFVQAIVTGKGPI 248
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 45.1 bits (105), Expect = 2e-04 Identities = 45/140 (32%), Positives = 59/140 (42%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AGAQ P V S ++ TQ++LMG +E R P + ++ Sbjct: 129 WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGG--GPLGEGLDP 186 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV EIK+ RL Sbjct: 187 L------------------YPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRL 218 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 219 AMFSMFGFFVQAIVTGKGPI 238
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 45.1 bits (105), Expect = 2e-04 Identities = 45/140 (32%), Positives = 62/140 (44%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AGAQ P V S ++ Q++LMG+VE R P + ++ Sbjct: 128 WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGG--GPLGEGLD- 184 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 + YPGG F DPLGL + PDT LKV E+K+ RL Sbjct: 185 -----------------KVYPGGAF-DPLGLADD-------PDT--FAELKVKELKNGRL 217 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 218 AMFSMFGFFVQAIVTGKGPI 237
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 45.1 bits (105), Expect = 2e-04 Identities = 46/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AGAQ P V S ++ Q++LMG VE R P + ++ Sbjct: 132 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVIDP 189 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV EIK+ RL Sbjct: 190 L------------------YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRL 221 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 222 AMFSMFGFFVQAIVTGKGPL 241
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 44.7 bits (104), Expect = 2e-04 Identities = 40/127 (31%), Positives = 54/127 (42%), Gaps = 16/127 (12%) Frame = +3 Query: 33 AQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDS----QSVEWATPWSRTAENFAN 200 A PG + P + G L WV+++ W + Q V W T + A F Sbjct: 98 AVPGIIVPEALG--------LGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLA 149 Query: 201 F------------TGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLA 344 + ++ YPGG F DPLG Y D K E LKV EIK+ RLA Sbjct: 150 IAFVEHQRSMEKDSEKKKYPGGAF-DPLG---------YSKDPAKFEELKVKEIKNGRLA 199 Query: 345 MLAMLIF 365 +LA++ F Sbjct: 200 LLAIVGF 206
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 44.7 bits (104), Expect = 2e-04 Identities = 46/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R P + V+ Sbjct: 132 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG--GPLGEVVDP 189 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV EIK+ RL Sbjct: 190 L------------------YPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRL 221 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 222 AMFSMFGFFVQAIVTGKGPL 241
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 44.7 bits (104), Expect = 2e-04 Identities = 46/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R P + V+ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG--GPLGEVVDP 187 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV EIK+ RL Sbjct: 188 L------------------YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRL 219 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 220 AMFSMFGFFVQAIVTGKGPL 239
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 44.7 bits (104), Expect = 2e-04 Identities = 45/140 (32%), Positives = 56/140 (40%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R Sbjct: 131 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA------------ 178 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL D E LKV EIK+ RL Sbjct: 179 GEPLGEVVDPL--------YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRL 220 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 221 AMFSMFGFFVQALVTGKGPL 240
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 44.3 bits (103), Expect = 3e-04 Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P + S ++ +Q++LMG+VE R P + ++ Sbjct: 102 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGG--GPLGEGLD- 158 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 + YPGG F DPLGL D E LKV EIK+ RL Sbjct: 159 -----------------KIYPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRL 191 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 192 AMFSMFGFFVQAIVTGKGPI 211
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 44.3 bits (103), Expect = 3e-04 Identities = 46/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R P + V+ Sbjct: 131 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVVDP 188 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV EIK+ RL Sbjct: 189 L------------------YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRL 220 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 221 AMFSMFGFFVQAIVTGKGPL 240
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 44.3 bits (103), Expect = 3e-04 Identities = 45/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P + S ++ Q++LMG VE R P + V+ Sbjct: 126 WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG--GPLGEVVDP 183 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV EIK+ RL Sbjct: 184 L------------------YPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRL 215 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 216 AMFSMFGFFVQAIVTGKGPL 235
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 44.3 bits (103), Expect = 3e-04 Identities = 46/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R P + V+ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVVDP 187 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV EIK+ RL Sbjct: 188 L------------------YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRL 219 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 220 AMFSMFGFFVQAIVTGKGPL 239
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 44.3 bits (103), Expect = 3e-04 Identities = 46/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R P + V+ Sbjct: 132 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVVDP 189 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV EIK+ RL Sbjct: 190 L------------------YPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRL 221 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 222 AMFSMFGFFVQAIVTGKGPL 241
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 44.3 bits (103), Expect = 3e-04 Identities = 45/143 (31%), Positives = 57/143 (39%), Gaps = 13/143 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG +E R Sbjct: 132 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVA------------ 179 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL D E LKV EIK+ RL Sbjct: 180 GGPLGEVTDPL--------YPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRL 221 Query: 342 AMLAMLIFYFEA-GQGKTPLGAL 407 AM +M F+ +A GK PL L Sbjct: 222 AMFSMFGFFVQAIVTGKGPLDNL 244
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 44.3 bits (103), Expect = 3e-04 Identities = 46/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R P + V+ Sbjct: 132 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVVDP 189 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV EIK+ RL Sbjct: 190 L------------------YPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRL 221 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 222 AMFSMFGFFVQAIVTGKGPL 241
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 44.3 bits (103), Expect = 3e-04 Identities = 46/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R P + V+ Sbjct: 132 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVVDP 189 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV EIK+ RL Sbjct: 190 L------------------YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRL 221 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 222 AMFSMFGFFVQAIVTGKGPL 241
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 43.9 bits (102), Expect = 3e-04 Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 1/127 (0%) Frame = +3 Query: 18 WFEAGAQPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFA 197 W++AG + S +L + +L +VE +RW D NP S + + + ++ Sbjct: 127 WYDAGKEQYFA---SSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQD------PIFKQYS 177 Query: 198 NFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA 377 GE GYPGG F+PL + P E E+ E+ + RLAMLA L F + Sbjct: 178 LPKGEVGYPGG-IFNPLN---------FAPTQEAKEK----ELANGRLAMLAFLGFVVQH 223 Query: 378 G-QGKTP 395 GK P Sbjct: 224 NVTGKGP 230
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 43.9 bits (102), Expect = 3e-04 Identities = 43/140 (30%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P + S ++ Q++LMG+VE R P + ++ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGG--GPLGEGLD- 186 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 + YPGG F DPLGL D E LKV EIK+ RL Sbjct: 187 -----------------KIYPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRL 219 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 220 AMFSMFGFFVQAIVTGKGPI 239
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 43.9 bits (102), Expect = 3e-04 Identities = 44/140 (31%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG+VE R P + ++ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGG--GPLGEGLD- 186 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 + YPGG F DPLGL D E LKV EIK+ RL Sbjct: 187 -----------------KIYPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRL 219 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 220 AMFSMFGFFVQAIVTGKGPI 239
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 43.9 bits (102), Expect = 3e-04 Identities = 45/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P + S ++ Q++LMG VE R P + V+ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG--GPLGEVVDP 187 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV EIK+ RL Sbjct: 188 L------------------YPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRL 219 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 220 AMFSMFGFFVQAIVTGKGPL 239
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 43.9 bits (102), Expect = 3e-04 Identities = 45/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R P + ++ Sbjct: 131 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVIDP 188 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV EIK+ RL Sbjct: 189 L------------------YPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRL 220 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 221 AMFSMFGFFVQAIVTGKGPL 240
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 43.5 bits (101), Expect = 4e-04 Identities = 44/140 (31%), Positives = 56/140 (40%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R Sbjct: 120 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA------------ 167 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL D E LKV E+K+ RL Sbjct: 168 GGPLGEVTDPI--------YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRL 209 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 210 AMFSMFGFFVQAIVTGKGPL 229
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 43.5 bits (101), Expect = 4e-04 Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P + S ++ TQ++LMG+VE R P + ++ Sbjct: 130 WFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGG--GPLGEGLDP 187 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D + LKV E+K+ RL Sbjct: 188 L------------------YPGGAF-DPLGLAD---------DPDSFAELKVKELKNGRL 219 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 220 AMFSMFGFFVQAIVTGKGPI 239
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 43.5 bits (101), Expect = 4e-04 Identities = 45/140 (32%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P + S ++ Q++LMG VE R P + V+ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVVDP 187 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV E+K RL Sbjct: 188 L------------------YPGGSF-DPLGLAD---------DPEAFGELKVKELKKGRL 219 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AML+M F+ +A GK PL Sbjct: 220 AMLSMFGFFVQAIVTGKGPL 239
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 43.5 bits (101), Expect = 4e-04 Identities = 44/140 (31%), Positives = 56/140 (40%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R Sbjct: 71 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA------------ 118 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL D E LKV E+K+ RL Sbjct: 119 GGPLGEVTDPI--------YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRL 160 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 161 AMFSMFGFFVQAIVTGKGPL 180
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 43.1 bits (100), Expect = 6e-04 Identities = 44/140 (31%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P + S ++ Q++LMG VE R P + V+ Sbjct: 127 WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVVDP 184 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV E+K+ RL Sbjct: 185 L------------------YPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRL 216 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 217 AMFSMFGFFVQAIVTGKGPL 236
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 43.1 bits (100), Expect = 6e-04 Identities = 44/140 (31%), Positives = 55/140 (39%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+ G+Q P V S ++ Q++LMG VE R Sbjct: 132 WFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA------------ 179 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL D E LKV EIK+ RL Sbjct: 180 GEPLGEVVDPL--------YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRL 221 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 222 AMFSMFGFFVQAIVTGKGPL 241
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 43.1 bits (100), Expect = 6e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +3 Query: 219 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 395 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 188 YPGGSF-DPLGLAD---------DAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237 Query: 396 L 398 L Sbjct: 238 L 238
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 43.1 bits (100), Expect = 6e-04 Identities = 43/140 (30%), Positives = 56/140 (40%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R Sbjct: 130 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR-------------- 175 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 A + YPGG F DPLGL D E LKV E+K+ RL Sbjct: 176 ------VAGGPLGEVEDPIYPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRL 219 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 220 AMFSMFGFFVQAIVTGKGPI 239
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 42.7 bits (99), Expect = 8e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +3 Query: 219 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 395 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 396 L 398 L Sbjct: 241 L 241
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 42.7 bits (99), Expect = 8e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +3 Query: 219 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 395 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 191 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240 Query: 396 L 398 L Sbjct: 241 L 241
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 42.7 bits (99), Expect = 8e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +3 Query: 219 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 395 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 189 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 396 L 398 L Sbjct: 239 L 239
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 42.7 bits (99), Expect = 8e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +3 Query: 219 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 395 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 189 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238 Query: 396 L 398 L Sbjct: 239 L 239
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 42.7 bits (99), Expect = 8e-04 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +3 Query: 219 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 395 YPGG F DPLGL D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 40 YPGGSF-DPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 89 Query: 396 L 398 L Sbjct: 90 L 90
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 42.4 bits (98), Expect = 0.001 Identities = 46/140 (32%), Positives = 59/140 (42%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ TQ++LMG VE R P + V+ Sbjct: 93 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVVDP 150 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL +P E LKV E+K+ RL Sbjct: 151 L------------------YPGGSF-DPLGLAE-------VP--EAFAELKVKELKNGRL 182 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ A GK PL Sbjct: 183 AMFSMFGFFVPAIVTGKGPL 202
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 42.4 bits (98), Expect = 0.001 Identities = 44/140 (31%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R P + ++ Sbjct: 131 WFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVIDP 188 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E L+V EIK+ RL Sbjct: 189 L------------------YPGGSF-DPLGLAD---------DPEAFAELEVKEIKNGRL 220 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 221 AMFSMFGFFVQAIVTGKGPL 240
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 42.4 bits (98), Expect = 0.001 Identities = 42/140 (30%), Positives = 56/140 (40%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AGAQ P + S ++ Q++LMG +E R Sbjct: 143 WFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVA------------ 190 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL D + LKV EIK+ RL Sbjct: 191 GGPLGEVTDPI--------YPGGNF-DPLGLAD---------DPDAFAELKVKEIKNGRL 232 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 233 AMFSMFGFFVQAIVTGKGPI 252
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 42.4 bits (98), Expect = 0.001 Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P + S ++ +Q++LMG +E R P + ++ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGG--GPLGEGLD- 186 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 + YPGG F DPLGL D E LKV EIK+ RL Sbjct: 187 -----------------KIYPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRL 219 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 220 AMFSMFGFFVQAIVTGKGPI 239
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 42.4 bits (98), Expect = 0.001 Identities = 45/140 (32%), Positives = 57/140 (40%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R P + V+ Sbjct: 132 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVVDP 189 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E LKV IK+ RL Sbjct: 190 L------------------YPGGSF-DPLGLA---------EDPEAFAELKVKHIKNGRL 221 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 222 AMFSMFGFFVQAIVTGKGPL 241
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 42.0 bits (97), Expect = 0.001 Identities = 44/140 (31%), Positives = 54/140 (38%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 W +AG+Q P V S ++ Q+LLMG VE R Sbjct: 132 WLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYR-------------- 177 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 A + YPGG F DPLGL D E LKV E K+ RL Sbjct: 178 ------VAGGPLGVVVDPLYPGGSF-DPLGLA---------EDPEAFAELKVKETKNGRL 221 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 222 AMFSMFGFFIQAIVTGKGPL 241
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 42.0 bits (97), Expect = 0.001 Identities = 44/140 (31%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE + Sbjct: 129 WFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEG---------------Y 173 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 R E + Y GG F DPLGLG D E+ LKV EIK+ RL Sbjct: 174 HVAGGRLGE-----VVDPLYLGGSF-DPLGLGD---------DPERFAELKVKEIKNGRL 218 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 219 AMFSMFGFFVQAIVTGKGPI 238
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 41.6 bits (96), Expect = 0.002 Identities = 48/138 (34%), Positives = 57/138 (41%), Gaps = 11/138 (7%) Frame = +3 Query: 18 WFEAGAQPGAVAPFSFGSL--LGTQLLLMGWVESKRWVDFFNPDSQSVEWATP--WSRTA 185 WF+AG+Q FS G L LG Q L+ + S WAT Sbjct: 110 WFKAGSQI-----FSEGGLDYLGNQSLI-------------HAQSILAIWATQVILMGAV 151 Query: 186 ENFANFTGEQG------YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAM 347 E + G G YPGG F DPL L D E LKV EIK+ RLAM Sbjct: 152 EGYRIAGGPLGEVTDPIYPGGSF-DPLALAD---------DPEAFAELKVKEIKNGRLAM 201 Query: 348 LAMLIFYFEA-GQGKTPL 398 +M F+ +A GK PL Sbjct: 202 FSMFGFFVQAIVTGKGPL 219
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 41.6 bits (96), Expect = 0.002 Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Frame = +3 Query: 219 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA---GQGK 389 +PGG F DPLGL + + G LKV EIK+ RLAM AML F+ +A G+G Sbjct: 201 HPGGPF-DPLGLAKDPEQGAL---------LKVKEIKNGRLAMFAMLGFFIQAYVTGEGP 250 Query: 390 TPLGALGL*DDF 425 A L D F Sbjct: 251 VENLAKHLSDPF 262
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 41.6 bits (96), Expect = 0.002 Identities = 42/140 (30%), Positives = 59/140 (42%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P + S ++ Q++LMG+VE R P + ++ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGG--GPLGEGLDP 187 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D + LKV EIK+ RL Sbjct: 188 I------------------YPGGAF-DPLGLAD---------DPDAFAELKVKEIKNGRL 219 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 220 AMFSMFGFFVQAIVTGKGPI 239
>FCPE_PHATR (Q41093) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 197 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/75 (42%), Positives = 38/75 (50%) Frame = +3 Query: 132 FNPDSQSVEWATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERL 311 F P QS + T F N G Q P FFDPLGL DG D EK +RL Sbjct: 16 FAPAQQSARTSVA---TNMAFENELGAQ--PPLGFFDPLGL---VADG----DQEKFDRL 63 Query: 312 KVAEIKHSRLAMLAM 356 + EIKH R++MLA+ Sbjct: 64 RYVEIKHGRISMLAV 78
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 41.2 bits (95), Expect = 0.002 Identities = 43/140 (30%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGA------------QPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AGA P + + + L Q++LMG VE R P + ++ Sbjct: 139 WFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNG--GPAGEGLDP 196 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P G+ FDPLGL + PDT LKV EIK+ RL Sbjct: 197 LYP-------------------GEAFDPLGLADD-------PDT--FAELKVKEIKNGRL 228 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM A L F+ +A GK P+ Sbjct: 229 AMFACLGFFVQAIVTGKGPI 248
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 41.2 bits (95), Expect = 0.002 Identities = 49/150 (32%), Positives = 66/150 (44%), Gaps = 18/150 (12%) Frame = +3 Query: 3 YSGVP-----WFEAGAQPGA------------VAPFSFGSLLGTQLLLMGWVESKRWVDF 131 Y+GV WF+AGAQ A + S + L Q++LMG E+ R Sbjct: 106 YAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRA--- 162 Query: 132 FNPDSQSVEWATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERL 311 + +E F + + YPGG F DPLGL + PDT L Sbjct: 163 --------------NGGSEGFLDDL-DTLYPGGPF-DPLGLADD-------PDT--FAEL 197 Query: 312 KVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 398 KV EIK+ RLAM + L F+ +A GK P+ Sbjct: 198 KVKEIKNGRLAMFSCLGFFVQAIVTGKGPV 227
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 40.8 bits (94), Expect = 0.003 Identities = 28/75 (37%), Positives = 37/75 (49%) Frame = +3 Query: 150 SVEWATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIK 329 S+ WATP T F N E G +FDPLGL E D E+L L+ E+ Sbjct: 160 SLGWATP---TGTGFNNLKDEYDL-GNLYFDPLGLKPE--------DPEELRELQTKELN 207 Query: 330 HSRLAMLAMLIFYFE 374 + RLAM+A+ F + Sbjct: 208 NGRLAMIAIAGFVLQ 222
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 40.8 bits (94), Expect = 0.003 Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 19/117 (16%) Frame = +3 Query: 171 WSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAML 350 W AE A TGE YP + FDPL L D + R++VAE+ H RLAML Sbjct: 190 WFPNAEPPALLTGE--YPADRGFDPLNLAA---------DPDVYARMRVAEVFHGRLAML 238 Query: 351 AML----------IFYFEAGQGKTPLG------ALGL*DDFWLARGG---RKGLLHR 464 + +FEAG L A+ ++W +GG +KG L R Sbjct: 239 CTVGCIVPELLGKGAWFEAGDSVDGLKLGFITMAIAAPTEYWRGQGGFNWQKGELDR 295 Score = 38.5 bits (88), Expect = 0.014 Identities = 21/47 (44%), Positives = 29/47 (61%) Frame = +3 Query: 219 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML 359 Y G + FDP GL + PDT ER+++AE+ H RLAMLA++ Sbjct: 19 YYGDRGFDPAGLAAD-------PDT--FERMRIAEVYHGRLAMLAVV 56 Score = 33.9 bits (76), Expect = 0.35 Identities = 19/45 (42%), Positives = 25/45 (55%) Frame = +3 Query: 225 GGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML 359 G K FDP GL D ER++VAE+ H RL+MLA++ Sbjct: 390 GDKGFDPAGLAA---------DPVTFERMQVAEVFHCRLSMLALV 425
>FCPF_PHATR (Q41094) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor Length = 197 Score = 40.8 bits (94), Expect = 0.003 Identities = 32/77 (41%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Frame = +3 Query: 132 FNPDSQSVEWATPWSRTAENFANFTGEQG-YPGGKFFDPLGLGGETKDGIYIPDTEKLER 308 F P QS + A N A F E G P FFDPLGL DG D EK +R Sbjct: 16 FAPAQQSAR-----TSVATNMA-FESELGAQPPLGFFDPLGL---VADG----DQEKFDR 62 Query: 309 LKVAEIKHSRLAMLAML 359 L+ E+KH R++MLA++ Sbjct: 63 LRYVELKHGRISMLAVV 79
>FCPD_PHATR (Q08587) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor Length = 197 Score = 40.8 bits (94), Expect = 0.003 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = +3 Query: 234 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTP 395 FFDPLGL DG D EK +RL+ EIKH R++MLA++ + + + P Sbjct: 45 FFDPLGL---VADG----DQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLP 91
>FCPC_PHATR (Q08586) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast| precursor Length = 197 Score = 40.8 bits (94), Expect = 0.003 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = +3 Query: 234 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTP 395 FFDPLGL DG D EK +RL+ EIKH R++MLA++ + + + P Sbjct: 45 FFDPLGL---VADG----DQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLP 91
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 40.4 bits (93), Expect = 0.004 Identities = 40/132 (30%), Positives = 52/132 (39%), Gaps = 12/132 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AGAQ P V S ++ T+++LMG VE R Sbjct: 134 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYR-------------- 179 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 A + YPG FD LGL DTE LKV E+K+ RL Sbjct: 180 ------IARGPLGEVTDPLYPGS--FDSLGLA---------EDTEAFAELKVKELKNGRL 222 Query: 342 AMLAMLIFYFEA 377 AM +M F+ +A Sbjct: 223 AMFSMFGFFVQA 234
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 40.4 bits (93), Expect = 0.004 Identities = 41/140 (29%), Positives = 56/140 (40%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AGAQ P + S ++ Q++LMG +E R Sbjct: 143 WFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVA------------ 190 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P + YPGG F DPLGL D + +KV EIK+ RL Sbjct: 191 GGPLGEVTDPI--------YPGGNF-DPLGLAD---------DPDAFADVKVKEIKNGRL 232 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 233 AMFSMFGFFVQAIVTGKGPI 252
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 40.4 bits (93), Expect = 0.004 Identities = 42/140 (30%), Positives = 58/140 (41%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P + S ++ Q++LMG +E R P + V+ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAG--GPLGEVVDP 187 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL D E +KV E+K+ RL Sbjct: 188 L------------------YPGGTF-DPLGLAD---------DPEAFADVKVKELKNGRL 219 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 220 AMFSMFGFFVQAIVTGKGPL 239
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 40.4 bits (93), Expect = 0.004 Identities = 44/140 (31%), Positives = 57/140 (40%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AG+Q P V S ++ Q++LMG VE R P + V+ Sbjct: 131 WFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG--GPLGEIVDP 188 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 YPGG F DPLGL + LKV EIK+ RL Sbjct: 189 L------------------YPGGSF-DPLGLAERP---------QAFAELKVKEIKNGRL 220 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK PL Sbjct: 221 AMFSMFGFFVQAIVTGKGPL 240
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 40.4 bits (93), Expect = 0.004 Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 18/150 (12%) Frame = +3 Query: 3 YSGVP-----WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDF 131 Y+GV WF+AGAQ P + + + L Q++LMG +E R Sbjct: 111 YAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNG- 169 Query: 132 FNPDSQSVEWATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERL 311 P + ++ P G+ FDPLGL + PDT L Sbjct: 170 -GPAGEGLDPLYP-------------------GESFDPLGLADD-------PDT--FAEL 200 Query: 312 KVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 398 KV EIK+ RLAM + F+ +A GK P+ Sbjct: 201 KVKEIKNGRLAMFSCFGFFVQAIVTGKGPI 230
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 39.3 bits (90), Expect = 0.008 Identities = 40/121 (33%), Positives = 50/121 (41%), Gaps = 1/121 (0%) Frame = +3 Query: 39 PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANFTGEQG 218 P V S ++ TQ++LMG VE R V P + Sbjct: 7 PSLVHAQSILAIWATQVILMGAVEGYR-----------VAGDGPLGEAEDLL-------- 47 Query: 219 YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTP 395 YPGG F DPL + D E LKV EIK+ RLAM +M F+ +A GK P Sbjct: 48 YPGGSF-DPLAS---------LTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 97 Query: 396 L 398 L Sbjct: 98 L 98
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 39.3 bits (90), Expect = 0.008 Identities = 41/140 (29%), Positives = 56/140 (40%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AGAQ P + S ++ Q++LMG +E R P + ++ Sbjct: 15 WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGG--GPLGEGLDP 72 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P G FDPLGL D E LKV EIK+ RL Sbjct: 73 LYP-------------------GDAFDPLGLAD---------DPEAKAELKVKEIKNGRL 104 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 105 AMFSMFGFFVQAIVTGKGPI 124
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 38.9 bits (89), Expect = 0.011 Identities = 42/140 (30%), Positives = 55/140 (39%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AGAQ P + S ++ Q++LMG +E R Sbjct: 131 WFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYR-------------- 176 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 E + PGG F DPLGL D E LKV EIK+ RL Sbjct: 177 -VGGGTLGEGL-----DPLLPGGAF-DPLGLAD---------DPEACAELKVKEIKNGRL 220 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 AM +M F+ +A GK P+ Sbjct: 221 AMFSMFGFFVQAIVTGKGPI 240
>FCPB_PHATR (Q08585) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 198 Score = 38.9 bits (89), Expect = 0.011 Identities = 21/41 (51%), Positives = 27/41 (65%) Frame = +3 Query: 234 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 356 F+DPLGL DG D EK +RL+ EIKH R++MLA+ Sbjct: 45 FYDPLGL---VADG----DQEKFDRLRYVEIKHGRISMLAV 78
>FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 212 Score = 38.1 bits (87), Expect = 0.019 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = +3 Query: 234 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML 359 F+DPLGL + D E+ +RL+ EIKH R+AMLA++ Sbjct: 48 FWDPLGLVADA-------DQERFDRLRYVEIKHGRIAMLAVV 82
>FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor (Fragment) Length = 182 Score = 38.1 bits (87), Expect = 0.019 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = +3 Query: 234 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 356 F+DPLGL + D E+ ERL+ E+KH R+AMLA+ Sbjct: 18 FWDPLGLLADA-------DQERFERLRYVEVKHGRIAMLAI 51
>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor (Fragment) Length = 211 Score = 38.1 bits (87), Expect = 0.019 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = +3 Query: 234 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 356 F+DPLGL + D E+ ERL+ E+KH R+AMLA+ Sbjct: 47 FWDPLGLLADA-------DQERFERLRYVEVKHGRIAMLAI 80
>FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 217 Score = 38.1 bits (87), Expect = 0.019 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = +3 Query: 234 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 356 F+DPLGL + D E+ ERL+ E+KH R+AMLA+ Sbjct: 53 FWDPLGLLADA-------DQERFERLRYVEVKHGRIAMLAI 86
>CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fragment)| Length = 102 Score = 38.1 bits (87), Expect = 0.019 Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = +3 Query: 201 FTGEQGY--PGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFE 374 F E+G P G FFDPLG T DG E ++L EIKH R+AMLA + + + Sbjct: 2 FENERGVADPVG-FFDPLGF---TADG----SVENFKKLAQTEIKHGRVAMLATMGYITQ 53 Query: 375 AGQGKTP 395 GK P Sbjct: 54 EITGKLP 60
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 38.1 bits (87), Expect = 0.019 Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 13/140 (9%) Frame = +3 Query: 18 WFEAGAQ------------PGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEW 161 WF+AGAQ P V + + Q++LMG +E R P + ++ Sbjct: 118 WFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNG--GPAGEGLDP 175 Query: 162 ATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRL 341 P G+ FDPLGL + PDT LKV EIK+ RL Sbjct: 176 LYP-------------------GESFDPLGLADD-------PDT--FAELKVKEIKNGRL 207 Query: 342 AMLAMLIFYFEA-GQGKTPL 398 A +M F+ +A GK P+ Sbjct: 208 ASFSMFGFFVQAIVTGKGPV 227 Score = 33.5 bits (75), Expect = 0.46 Identities = 26/79 (32%), Positives = 37/79 (46%) Frame = +3 Query: 123 VDFFNPDSQSVEWATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKL 302 V+F+ P+ +W P+S A A TGE +PG +D GL D E Sbjct: 34 VEFYGPNR--AKWLGPYSENATP-AYLTGE--FPGDYGWDTAGLSA---------DPETF 79 Query: 303 ERLKVAEIKHSRLAMLAML 359 +R + E+ H+R AML L Sbjct: 80 KRYRELELIHARWAMLGAL 98
>FCP_ODOSI (Q42395) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 203 Score = 37.0 bits (84), Expect = 0.042 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +3 Query: 180 TAENFANFTGEQG-YPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 356 TA N A F E G P FFDPLG+ + D E+ +RL+ E+KH R+A +A Sbjct: 26 TALNMA-FESELGAQPPLGFFDPLGMLADA-------DQERFDRLRYVEVKHGRIAHVAF 77 Query: 357 L 359 L Sbjct: 78 L 78
>FCPA_PHATR (Q08584) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 196 Score = 36.6 bits (83), Expect = 0.055 Identities = 27/75 (36%), Positives = 35/75 (46%) Frame = +3 Query: 132 FNPDSQSVEWATPWSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERL 311 F P QS + + EN GY +DPLGL DG + EK +RL Sbjct: 16 FAPAQQSARTSVATNMAFENEIGAQQPLGY-----WDPLGL---VADG----NQEKFDRL 63 Query: 312 KVAEIKHSRLAMLAM 356 + EIKH R+ MLA+ Sbjct: 64 RYVEIKHGRICMLAV 78
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 36.2 bits (82), Expect = 0.071 Identities = 22/63 (34%), Positives = 34/63 (53%) Frame = +3 Query: 171 WSRTAENFANFTGEQGYPGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAML 350 W A+ A+ TGE YP + FDPL + D R++V+E+ H+RL+ML Sbjct: 162 WFPGAQPPAHLTGE--YPADRGFDPLSVAA---------DPTVYARMRVSEVFHARLSML 210 Query: 351 AML 359 A++ Sbjct: 211 AIV 213
>EPOR_MOUSE (P14753) Erythropoietin receptor precursor (EPO-R)| Length = 507 Score = 35.8 bits (81), Expect = 0.093 Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 24/99 (24%) Frame = -1 Query: 268 LVSPPRPRGS-------------------KNLPPGYPCSPVKLAK-FSAVRDHGVAHSTD 149 L S PRP G+ + LPP P +P L + V D G+ STD Sbjct: 409 LASKPRPEGTSPSSFEYTILDPSSQLLCPRALPPELPPTPPHLKYLYLVVSDSGI--STD 466 Query: 148 WESGLKKSTHRLDS----THPMSSSWVPRSDPKEKGATA 44 + SG + H S +HP +S VP S+P G A Sbjct: 467 YSSGGSQGVHGDSSDGPYSHPYENSLVPDSEPLHPGYVA 505
>FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 217 Score = 35.4 bits (80), Expect = 0.12 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +3 Query: 234 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 356 F+DPLGL + D + ERL+ E+KH R+AMLA+ Sbjct: 53 FWDPLGLLADA-------DQDGFERLRYVEVKHGRIAMLAI 86
>SYFB_LISMO (Q8Y7Q1) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 802 Score = 33.1 bits (74), Expect = 0.60 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = -3 Query: 278 DAVLGLATEAEGVEELAARVPLLAGEVGEVLGCAR-PRRGPLHRLGVRVEEVDP 120 +A+ E EGVEEL+A + + VGEVL C R P L++ V+ +E +P Sbjct: 24 EAITRTGIEIEGVEELSASLKNVV--VGEVLSCERHPDAEKLNKCLVQTDEAEP 75
>SYFB_LISMF (Q720K7) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 802 Score = 33.1 bits (74), Expect = 0.60 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = -3 Query: 278 DAVLGLATEAEGVEELAARVPLLAGEVGEVLGCAR-PRRGPLHRLGVRVEEVDP 120 +A+ E EGVEEL+A + + VGEVL C R P L++ V+ +E +P Sbjct: 24 EAITRTGIEIEGVEELSASLKNVV--VGEVLSCERHPDAEKLNKCLVQTDETEP 75
>SYFB_LISIN (Q92CI6) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 802 Score = 32.3 bits (72), Expect = 1.0 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = -3 Query: 278 DAVLGLATEAEGVEELAARVPLLAGEVGEVLGCAR-PRRGPLHRLGVRVEEVDP 120 +A+ E EGVEEL+A + + VGEVL C R P L++ V+ +E +P Sbjct: 24 EAITRTGIEIEGVEELSASLKNVV--VGEVLSCERHPDAEKLNKCLVQTDEEEP 75
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 32.3 bits (72), Expect = 1.0 Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 4/97 (4%) Frame = -1 Query: 304 SSFSVSGM*MPSLVSPPRPRGS-KNLPPG---YPCSPVKLAKFSAVRDHGVAHSTDWESG 137 SS SVSG P+ PP P ++ P P PVK AK S ++D E G Sbjct: 762 SSRSVSGSPEPAAKKPPAPTSPVQSQSPSTNWSPAVPVKKAK-SPTPSPSPPRNSDQEGG 820 Query: 136 LKKSTHRLDSTHPMSSSWVPRSDPKEKGATAPGCAPA 26 KK + D H K++ A A A A Sbjct: 821 GKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAA 857
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1 (Ser/Arg-related| nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 32.0 bits (71), Expect = 1.3 Identities = 29/97 (29%), Positives = 36/97 (37%), Gaps = 4/97 (4%) Frame = -1 Query: 304 SSFSVSGM*MPSLVSPPRP----RGSKNLPPGYPCSPVKLAKFSAVRDHGVAHSTDWESG 137 SS SVSG P+ PP P + P PVK AK S ++D E G Sbjct: 749 SSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAK-SPTPSPSPPRNSDQEGG 807 Query: 136 LKKSTHRLDSTHPMSSSWVPRSDPKEKGATAPGCAPA 26 KK + D H K++ A A A A Sbjct: 808 GKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAA 844
>CLCKB_RAT (P51802) Chloride channel protein ClC-Kb (Chloride channel Kb)| (ClC-K2) Length = 687 Score = 31.6 bits (70), Expect = 1.8 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 Query: 139 GLKKSTHRLDSTHPMSSSWVPRSDPKEKGATAPGC 35 G+ K TH + S H S+SW P P + A GC Sbjct: 592 GIVKRTHLVQSLHTDSASWAPGQQPCLQDILANGC 626
>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)| (Ubiquitin thioesterase 42) (Ubiquitin-specific-processing protease 42) (Deubiquitinating enzyme 42) Length = 1325 Score = 31.2 bits (69), Expect = 2.3 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Frame = +2 Query: 224 GRQVLRPPRPRWRDQGRHLHPRH-----REA*AAQGGRDQALAPRHACHAHLLLRGRTGQ 388 GR+ P RPRW D+ R+ H R+ R+ GGR+ A H RGR G Sbjct: 1045 GREKFYPDRPRW-DRCRYYHDRYALYAARDWKPFHGGREHERAGLHERPHKDHNRGRRGC 1103 Query: 389 DAAR 400 + AR Sbjct: 1104 EPAR 1107
>OCLN_POTTR (Q28793) Occludin| Length = 489 Score = 31.2 bits (69), Expect = 2.3 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = -3 Query: 128 VDPPLGLHPPHEQQLGAEERPEGEGRHRARLR-SGLE 21 V PP G PP E+ G+ RP HR R R +GLE Sbjct: 324 VPPPEGPSPPEEKDKGSVSRPPARRGHRQRPRPTGLE 360
>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22| Length = 1010 Score = 31.2 bits (69), Expect = 2.3 Identities = 22/69 (31%), Positives = 32/69 (46%) Frame = +2 Query: 212 ARVPGRQVLRPPRPRWRDQGRHLHPRHREA*AAQGGRDQALAPRHACHAHLLLRGRTGQD 391 +R PG R P P RD + P R + RD++L+PR H+H R T + Sbjct: 35 SRSPGE---RTPSPPSRDPSPYRSPGERTP-SPSPRRDRSLSPRDQPHSHPRSRSPTPRS 90 Query: 392 AARRARSIR 418 + RS+R Sbjct: 91 QSPSRRSVR 99
>FCPC_MACPY (Q40299) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast| precursor Length = 216 Score = 30.8 bits (68), Expect = 3.0 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +3 Query: 234 FFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAM 356 F+DPLGL + D + ERL+ E+K R+AMLA+ Sbjct: 52 FWDPLGLLEDA-------DQDAFERLRYVEVKLGRIAMLAI 85
>Y924_THET8 (Q56419) UPF0103 protein TTHA0924| Length = 326 Score = 30.8 bits (68), Expect = 3.0 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 4/56 (7%) Frame = -3 Query: 341 EARVLDLGHLEPLKLLGVGDVDAVLGLA----TEAEGVEELAARVPLLAGEVGEVL 186 EAR DLG LE L G+ +A L T +GVE +A+ +PLL G+VL Sbjct: 253 EARRRDLGFLERL---AEGEPEAALAFLGANPTRIDGVEVVASLLPLLRERKGKVL 305
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 30.8 bits (68), Expect = 3.0 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = +3 Query: 213 QGY-PGGKFFDPLGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYF-EAGQG 386 +GY PG FDPLGL D ++ ++ E+ H RLAM+A F EA G Sbjct: 145 EGYEPGDLGFDPLGLAPS--------DPDEFRLMQEKELSHGRLAMIAAAGFLAQEAVSG 196 Query: 387 KT 392 T Sbjct: 197 DT 198 Score = 30.8 bits (68), Expect = 3.0 Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Frame = +3 Query: 195 ANFTGEQGYPGGKF----FDPLG-LGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAML 359 AN G PGG FDP G L G+ K +Y RL+ AE H R+AMLA L Sbjct: 28 ANDEFAYGLPGGANILGEFDPAGFLKGKDKLEVY--------RLREAETTHGRVAMLASL 79 Query: 360 IF 365 F Sbjct: 80 GF 81
>CCHCR_MOUSE (Q8K2I2) Coiled-coil alpha-helical rod protein 1 (Alpha helical| coiled-coil rod protein) Length = 770 Score = 30.4 bits (67), Expect = 3.9 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 4/114 (3%) Frame = -3 Query: 392 RLALSGLEVED---EHGKHGEARVLDLGHLEPLKLLGVGDVDAVLGLATEAEGVEE-LAA 225 R AL+G E+ E KH E + H E L L A+ LA++AEG+E+ L + Sbjct: 147 RTALAGAEMVRKNLEEAKHKELEEIQSLHQEQLSSLTQAHQKALDSLASKAEGLEKSLNS 206 Query: 224 RVPLLAGEVGEVLGCARPRRGPLHRLGVRVEEVDPPLGLHPPHEQQLGAEERPE 63 AGE ++ + ++L EE++ + L + +G + PE Sbjct: 207 LETKRAGEAKQLAMAQKEADMLRNQLSKTQEELEAQVTLVESLRKYVGEQVLPE 260
>MILK1_HUMAN (Q8N3F8) Molecule interacting with Rab13 (MIRab13) (MICAL-like| protein 1) Length = 863 Score = 30.4 bits (67), Expect = 3.9 Identities = 26/87 (29%), Positives = 30/87 (34%), Gaps = 3/87 (3%) Frame = -1 Query: 256 PRPRGSKNLPPGYPCSPVKLAKFSAVRDHGVAHSTDWESGLKKSTHRLDSTHPMSSSWVP 77 PR RGS P PCS V D S S + +P + P Sbjct: 583 PRTRGSSGPQPAKPCSGATPTPLLLVGDRSPVPSPG-SSSPQLQVKSSCKENPFNRKPSP 641 Query: 76 RSDPKEKGAT---APGCAPASNHGTPL 5 + P K AT P PA HG PL Sbjct: 642 AASPATKKATKGSKPVRPPAPGHGFPL 668
>AROA_ARCFU (O28775) Probable 3-phosphoshikimate 1-carboxyvinyltransferase (EC| 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 416 Score = 30.4 bits (67), Expect = 3.9 Identities = 19/68 (27%), Positives = 36/68 (52%) Frame = -3 Query: 257 TEAEGVEELAARVPLLAGEVGEVLGCARPRRGPLHRLGVRVEEVDPPLGLHPPHEQQLGA 78 +E EGVE A+ +P L + + A+ + + +R++E+D G+H + + LG Sbjct: 286 SELEGVEVDASDIPDLVPTIAVLAAVAKGKTRIYNAEHLRIKEIDRIEGIH-QNLKALGV 344 Query: 77 EERPEGEG 54 E +P +G Sbjct: 345 ESKPLKDG 352
>CDSN_MOUSE (Q7TPC1) Corneodesmosin precursor| Length = 561 Score = 30.0 bits (66), Expect = 5.1 Identities = 28/111 (25%), Positives = 37/111 (33%), Gaps = 26/111 (23%) Frame = -1 Query: 457 NKPFLPPRASQKSS-------YRPSAPSGVLPCPXXXXXXXXXXXARRECLISATLSRSS 299 + P +P R S SS ++P GV PC R + S++ S S Sbjct: 380 SNPIIPSRGSSSSSGYPVGVVFQPVGSGGVQPCGTGSVSSKGPCSGTRIQITSSSSSTSY 439 Query: 298 FSVSGM*MPSLVSPP-------------------RPRGSKNLPPGYPCSPV 203 SG S P +P GSK+ GYPC V Sbjct: 440 HPCSGGSSQGPCSSPGTGSISGGSSSLSSGKIVLQPCGSKSTSSGYPCLSV 490
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 30.0 bits (66), Expect = 5.1 Identities = 32/105 (30%), Positives = 38/105 (36%), Gaps = 11/105 (10%) Frame = -1 Query: 304 SSFSVSGM*MPSLVSPPRPRG-------SKNLPPGYPCSPVKLAKFSAVRDHGVAHSTDW 146 SS SVSG P+ PP P S N P P K S A ++D Sbjct: 790 SSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPAKKAK----SPTPSLSPARNSDQ 845 Query: 145 ESGLKKSTHRLDSTHPMSSSWVP-RSDPKEKG---ATAPGCAPAS 23 E G KK + D H + KEK AT APA+ Sbjct: 846 EGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVTIATPATAAPAA 890
>SYFB_METCA (Q60AY9) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 791 Score = 30.0 bits (66), Expect = 5.1 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Frame = -3 Query: 266 GLATEAEGVEELAARVPLLAGE--VGEVLGCARPR---RGPLHRLGVRVEEVDPPLGLHP 102 G TEA + L R P+ E +G++LG PR L RLG+ VEE +P + P Sbjct: 389 GPVTEAVREDLLPLRAPVRLREQRIGQLLGLNLPRDEVADILARLGMSVEEDEPGWTVTP 448 Query: 101 P 99 P Sbjct: 449 P 449
>SF3B1_MOUSE (Q99NB9) Splicing factor 3B subunit 1 (Spliceosome-associated| protein 155) (SAP 155) (SF3b155) (Pre-mRNA-splicing factor SF3b 155 kDa subunit) Length = 1304 Score = 29.6 bits (65), Expect = 6.7 Identities = 20/70 (28%), Positives = 26/70 (37%), Gaps = 2/70 (2%) Frame = -1 Query: 211 SPVKLAKFSAVRDHGVAHSTDWES--GLKKSTHRLDSTHPMSSSWVPRSDPKEKGATAPG 38 +P KL+ + G S W+ G K + +T P S W P GA PG Sbjct: 211 TPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGAT-PGSKIWDPTPSHTPAGAATPG 269 Query: 37 CAPASNHGTP 8 H TP Sbjct: 270 RGDTPGHATP 279
>SF3B1_HUMAN (O75533) Splicing factor 3B subunit 1 (Spliceosome-associated| protein 155) (SAP 155) (SF3b155) (Pre-mRNA-splicing factor SF3b 155 kDa subunit) Length = 1304 Score = 29.6 bits (65), Expect = 6.7 Identities = 20/70 (28%), Positives = 26/70 (37%), Gaps = 2/70 (2%) Frame = -1 Query: 211 SPVKLAKFSAVRDHGVAHSTDWES--GLKKSTHRLDSTHPMSSSWVPRSDPKEKGATAPG 38 +P KL+ + G S W+ G K + +T P S W P GA PG Sbjct: 211 TPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGAT-PGSKIWDPTPSHTPAGAATPG 269 Query: 37 CAPASNHGTP 8 H TP Sbjct: 270 RGDTPGHATP 279
>KAPR_MAGGR (O14448) cAMP-dependent protein kinase regulatory subunit (PKA| regulatory subunit) Length = 390 Score = 29.6 bits (65), Expect = 6.7 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 7/82 (8%) Frame = -3 Query: 344 GEARVLDLGHLEPLKLLGVGDVDAVLGLATEAEGVEELAARVPLLAGEVGE-----VLGC 180 GEA G +P+KL GD L L +A + ++ + +G+ +LG Sbjct: 305 GEAEAFKAGIDQPVKLYKKGDFFGELALLNDAPRAASVVSKTEVKVAALGKSAFQRLLGP 364 Query: 179 ARP--RRGPLHRLGVRVEEVDP 120 P RR + VEE+DP Sbjct: 365 VEPIMRRTRYDAIKTGVEEMDP 386
>PRP4B_HUMAN (Q13523) Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1)| (PRP4 pre-mRNA-processing factor 4 homolog) (PRP4 kinase) Length = 1007 Score = 29.6 bits (65), Expect = 6.7 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = +2 Query: 185 RELRQLHRRARVPGRQVLRPPR----PRWRDQGRHLHPRHREA*AAQGGR 322 R + RR+R P R+ P R PR RD+GR R R ++GGR Sbjct: 442 RSRSPIRRRSRSPLRRSRSPRRRSRSPRRRDRGRRSRSRLRRRSRSRGGR 491
>MURE_XANCP (Q8PCK4) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 495 Score = 29.6 bits (65), Expect = 6.7 Identities = 20/73 (27%), Positives = 33/73 (45%) Frame = -3 Query: 362 DEHGKHGEARVLDLGHLEPLKLLGVGDVDAVLGLATEAEGVEELAARVPLLAGEVGEVLG 183 D HG + + H LLG +VD +L +A ++ + ++ EVLG Sbjct: 275 DHHGIQFTLHIGEAAHPVRSPLLGRFNVDNLLAVAGALHALD-------IAPAQIAEVLG 327 Query: 182 CARPRRGPLHRLG 144 +P G ++RLG Sbjct: 328 RLQPIHGRMNRLG 340
>RASF7_HUMAN (Q02833) Ras association domain-containing protein 7 (HRAS1-related| cluster protein 1) Length = 373 Score = 29.3 bits (64), Expect = 8.7 Identities = 23/68 (33%), Positives = 29/68 (42%) Frame = -3 Query: 209 AGEVGEVLGCARPRRGPLHRLGVRVEEVDPPLGLHPPHEQQLGAEERPEGEGRHRARLRS 30 A V GC RG L +RV+ LG EQ+L E+ E EG+ R + S Sbjct: 142 AAPVTPTPGCCTDLRG----LELRVQRNAEELGHEAFWEQELRREQAREREGQARLQALS 197 Query: 29 GLEPRHAA 6 HAA Sbjct: 198 AATAEHAA 205
>MURC_BRUSU (P65469) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 471 Score = 29.3 bits (64), Expect = 8.7 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 20/110 (18%) Frame = -3 Query: 512 LFDVEQIPFNPCVRSD-----AMQQTLSPTARQPKIIL*TERAERRLALSGLEVEDEHGK 348 L D E I + ++ + A ++ L P R+ +++ R R +A+ G HGK Sbjct: 64 LGDAEVIVVSTAIKKNNPELVAAREKLLPVVRRAEMLAELMRFRRAVAIGGT-----HGK 118 Query: 347 HGE----ARVLDLGHLEPLKLLG-----------VGDVDAVLGLATEAEG 243 A +LD GHL+P + G +GD D ++ A E++G Sbjct: 119 TTTTSLVAALLDAGHLDPTVINGGIINAYGTNARMGDGDWMVVEADESDG 168
>MURC_BRUME (P65468) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 471 Score = 29.3 bits (64), Expect = 8.7 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 20/110 (18%) Frame = -3 Query: 512 LFDVEQIPFNPCVRSD-----AMQQTLSPTARQPKIIL*TERAERRLALSGLEVEDEHGK 348 L D E I + ++ + A ++ L P R+ +++ R R +A+ G HGK Sbjct: 64 LGDAEVIVVSTAIKKNNPELVAAREKLLPVVRRAEMLAELMRFRRAVAIGGT-----HGK 118 Query: 347 HGE----ARVLDLGHLEPLKLLG-----------VGDVDAVLGLATEAEG 243 A +LD GHL+P + G +GD D ++ A E++G Sbjct: 119 TTTTSLVAALLDAGHLDPTVINGGIINAYGTNARMGDGDWMVVEADESDG 168
>MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (Lol p Va) (Lol p| Ib) Length = 308 Score = 29.3 bits (64), Expect = 8.7 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = -1 Query: 274 PSLVSPP-RPRGSKNLPPGYPCSP-VKLAKFSAVRDHGVAHST 152 P+ SPP RPR S+ PP P +P VK A F A + T Sbjct: 219 PTSSSPPSRPRSSRPTPPPSPAAPEVKYAVFEAALTKAITAMT 261
>ABI1_MOUSE (Q8CBW3) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Spectrin| SH3 domain-binding protein 1) (Eps8 SH3 domain-binding protein) (Eps8-binding protein) (e3B1) (Ablphilin-1) Length = 480 Score = 29.3 bits (64), Expect = 8.7 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 7/92 (7%) Frame = -1 Query: 265 VSPPRPRGSKNLPPGYPCSPVKLA------KFSAVRDHGVAHS-TDWESGLKKSTHRLDS 107 V PP +P Y SP +L + +++ HS + SG ++++ Sbjct: 203 VKPP------TVPNDYMTSPARLGSQHSPGRTASLNQRPRTHSGSSGGSGSRENSGSSSI 256 Query: 106 THPMSSSWVPRSDPKEKGATAPGCAPASNHGT 11 P++ VP P G APG AP S +GT Sbjct: 257 GIPIA---VPTPSPPTAGPAAPGAAPGSQYGT 285
>ABI1_RAT (Q9QZM5) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Eps8 SH3| domain-binding protein) (Eps8-binding protein) (e3B1) Length = 475 Score = 29.3 bits (64), Expect = 8.7 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 7/92 (7%) Frame = -1 Query: 265 VSPPRPRGSKNLPPGYPCSPVKLA------KFSAVRDHGVAHS-TDWESGLKKSTHRLDS 107 V PP +P Y SP +L + +++ HS + SG ++++ Sbjct: 198 VKPP------TVPNDYMTSPARLGSQHSPGRTASLNQRPRTHSGSSGGSGSRENSGSSSI 251 Query: 106 THPMSSSWVPRSDPKEKGATAPGCAPASNHGT 11 P++ VP P G APG AP S +GT Sbjct: 252 GIPIA---VPTPSPPTAGPAAPGAAPGSQYGT 280
>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 Length = 1203 Score = 29.3 bits (64), Expect = 8.7 Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 6/104 (5%) Frame = -1 Query: 316 TLSRSSFSV---SGM*MPSLVSPPRPRGSKNLPP---GYPCSPVKLAKFSAVRDHGVAHS 155 T S SSF + +G P+ +SP P S + PP G P +P A +A G H Sbjct: 851 TPSSSSFHIQQLAGFSAPAGLSPLLPSSSSSPPPGACGSPSAPTPSAGVAATTIAGFGHF 910 Query: 154 TDWESGLKKSTHRLDSTHPMSSSWVPRSDPKEKGATAPGCAPAS 23 G +SSS P P + GA +P A S Sbjct: 911 HKALGG------------SLSSSDSPLLTPLQPGARSPQAAQPS 942
>REP_STRLI (P22406) Protein rep| Length = 456 Score = 29.3 bits (64), Expect = 8.7 Identities = 30/85 (35%), Positives = 34/85 (40%) Frame = -3 Query: 281 VDAVLGLATEAEGVEELAARVPLLAGEVGEVLGCARPRRGPLHRLGVRVEEVDPPLGLHP 102 V VL LA A+ V V L AGEV E L L R EE Sbjct: 380 VREVLALADAADTV------VVLTAGEVAEAYA------DMLAALAQRREEATARRRREQ 427 Query: 101 PHEQQLGAEERPEGEGRHRARLRSG 27 +Q A++R E RH ARL SG Sbjct: 428 DDDQDDDADDRQERAARHIARLASG 452
>KITH_RHOSI (Q9ZIG2) Thymidine kinase (EC 2.7.1.21)| Length = 213 Score = 29.3 bits (64), Expect = 8.7 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -1 Query: 463 RCNKPFLPPRASQKSSYRPSAPSGVLPCP 377 RC + F PPR + SS + AP+ P P Sbjct: 182 RCRRCFQPPRPTSTSSLKAPAPAATAPRP 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,213,544 Number of Sequences: 219361 Number of extensions: 1795238 Number of successful extensions: 7442 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 6923 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7418 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
