ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags24i16 |
|---|---|
| Clone Library Name | barley_pub |
>SAC3_MOUSE (Q91WF7) SAC domain-containing protein 3| Length = 907 Score = 103 bits (256), Expect = 5e-22 Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 8/139 (5%) Frame = +1 Query: 4 VQNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTR 183 VQ RGS+PLFWSQD S + KP I L + D LHF+ + R+G+PIIILNL+K R Sbjct: 322 VQVRGSVPLFWSQDISTMMPKPPITLDQADPFAHVAALHFDQMLQRFGSPIIILNLVKER 381 Query: 184 ERR--ESMLRREFDKAIRIINQLFSEENHLRFLHWDLHKNSEGKPTNVLDVLLKVAFRAL 357 E+R E +L E A+ +NQ E+ + ++ WD+ K ++ K NVLD L +A + Sbjct: 382 EKRKHERILSEELVAAVTYLNQFLPPEHTIVYIPWDMAKYTKSKLCNVLDRLNVIAESVV 441 Query: 358 RLTEFF------YCQVAPP 396 + T FF YC + P Sbjct: 442 KKTGFFVNRPDSYCSILRP 460
>SAC3_HUMAN (Q92562) SAC domain-containing protein 3| Length = 907 Score = 101 bits (252), Expect = 1e-21 Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 8/139 (5%) Frame = +1 Query: 4 VQNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTR 183 VQ RGS+PL+WSQD S + KP I L + D LHF+ + R+G+PIIILNL+K R Sbjct: 322 VQVRGSVPLYWSQDISTMMPKPPITLDQADPFAHVAALHFDQMFQRFGSPIIILNLVKER 381 Query: 184 ERR--ESMLRREFDKAIRIINQLFSEENHLRFLHWDLHKNSEGKPTNVLDVLLKVAFRAL 357 E+R E +L E A+ +NQ E+ + ++ WD+ K ++ K NVLD L +A + Sbjct: 382 EKRKHERILSEELVAAVTYLNQFLPPEHTIVYIPWDMAKYTKSKLCNVLDRLNVIAESVV 441 Query: 358 RLTEFF------YCQVAPP 396 + T FF YC + P Sbjct: 442 KKTGFFVNRPDSYCSILRP 460
>FIG4_YEAST (P42837) Polyphosphoinositide phosphatase (EC 3.1.3.-)| (Phosphatidylinositol 3,5-bisphosphate 5-phosphatase) (Factor-induced gene 4) Length = 879 Score = 89.7 bits (221), Expect = 6e-18 Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 3/128 (2%) Frame = +1 Query: 4 VQNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPII-ILNLIKT 180 VQ+RGSIPL+W+QD S L KP I ++ D + LHF+NL RYG I ILNLIKT Sbjct: 321 VQHRGSIPLYWTQDASNLTTKPPIRINVVDPFFSPAALHFDNLFQRYGGGTIQILNLIKT 380 Query: 181 RER--RESMLRREFDKAIRIINQLFSEENHLRFLHWDLHKNSEGKPTNVLDVLLKVAFRA 354 +E+ RE+ L EF++ I +N+ L + WD+ + S+ V++ L K A Sbjct: 381 KEKTPRETKLLWEFEQCIDYLNEFLPTLKKLDYTSWDMSRASKQDGQGVIEFLEKYAVNT 440 Query: 355 LRLTEFFY 378 + T F+ Sbjct: 441 VTTTGIFH 448
>YF51_SCHPO (O14127) Hypothetical protein C3C7.01c in chromosome I| Length = 611 Score = 49.7 bits (117), Expect = 7e-06 Identities = 29/96 (30%), Positives = 55/96 (57%) Frame = +1 Query: 7 QNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTRE 186 Q RGSIP+FW++ + L+ +P + L D + HF+ L YG+ ++++NL+ ++ Sbjct: 257 QIRGSIPMFWAE-VNDLHYRPLLSLQPLDYSETVFGKHFQELANDYGDNLVVVNLL-DQK 314 Query: 187 RRESMLRREFDKAIRIINQLFSEENHLRFLHWDLHK 294 RE+ LR F+K + ++ L ++++D HK Sbjct: 315 GREAPLRSGFEKLCK-----RNKNPPLSYVYYDYHK 345
>RSD1_YEAST (P32368) Recessive suppressor of secretory defect| Length = 623 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/96 (25%), Positives = 56/96 (58%) Frame = +1 Query: 4 VQNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTR 183 +Q RGS+P++W+ + + L KP+++L E + +ATK HF+ + YG+ ++ NL+ + Sbjct: 253 LQTRGSVPIYWA-EINNLKYKPNLVLGE--NSLDATKKHFDQQKELYGDNYLV-NLV-NQ 307 Query: 184 ERRESMLRREFDKAIRIINQLFSEENHLRFLHWDLH 291 + E ++ ++ + +N + + ++++D H Sbjct: 308 KGHELPVKEGYESVVHALN-----DPKIHYVYFDFH 338
>YNK6_YEAST (P50942) Hypothetical 133.3 kDa protein in CYB5-LEU4 intergenic| region Length = 1183 Score = 44.3 bits (103), Expect = 3e-04 Identities = 26/68 (38%), Positives = 37/68 (54%) Frame = +1 Query: 7 QNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTRE 186 Q RGS+P+FW QDTS ++ K I + T HF L +YG P+ I+NL+ T+ Sbjct: 307 QIRGSLPIFWEQDTSLISPKIQ-ITRSVEATQPTFDEHFIRLFKKYG-PVHIINLLSTKS 364 Query: 187 RRESMLRR 210 + RR Sbjct: 365 SEIQLSRR 372
>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1575 Score = 43.1 bits (100), Expect = 6e-04 Identities = 33/125 (26%), Positives = 56/125 (44%) Frame = +1 Query: 4 VQNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTR 183 +Q RGS+PLFW Q ++ + + A HF L+ YG II+ NL+ ++ Sbjct: 247 IQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGRQIIV-NLLGSK 305 Query: 184 ERRESMLRREFDKAIRIINQLFSEENHLRFLHWDLHKNSEGKPTNVLDVLLKVAFRALRL 363 E E ML + F ++ ++ +++D H+ +G L +LK + Sbjct: 306 E-GEHMLSKAFQSHLKASEHAAD----IQMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLD 360 Query: 364 TEFFY 378 FFY Sbjct: 361 YGFFY 365
>SYJ1_SCHPO (O43001) Synaptojanin homolog 1 (EC 3.1.3.36)| (Inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1076 Score = 42.7 bits (99), Expect = 8e-04 Identities = 30/95 (31%), Positives = 47/95 (49%) Frame = +1 Query: 7 QNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTRE 186 Q RGSIP+FW Q+ ++ + I + T A + HF +L YG P+ I+NL+ T Sbjct: 285 QVRGSIPIFWEQEGVQMFGQKIDITRSLEATRAAFEKHFTSLIEEYG-PVHIINLLGTGS 343 Query: 187 RRESMLRREFDKAIRIINQLFSEENHLRFLHWDLH 291 S+ R +R QL E++ + +D H Sbjct: 344 GERSLSER-----LRQHIQLSPEKDLIHLTEFDYH 373
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 42.4 bits (98), Expect = 0.001 Identities = 32/125 (25%), Positives = 55/125 (44%) Frame = +1 Query: 4 VQNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTR 183 +Q RGS+PLFW Q ++ + + A HF L+ YG I++ NL+ ++ Sbjct: 247 IQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKDLYGKQIVV-NLLGSK 305 Query: 184 ERRESMLRREFDKAIRIINQLFSEENHLRFLHWDLHKNSEGKPTNVLDVLLKVAFRALRL 363 E E ML + F ++ + + + +D H+ +G L +LK + Sbjct: 306 E-GEHMLSKAFQSHLK----ASEHASDIHMVSFDYHQMVKGGKAEKLHSILKPQVQKFLD 360 Query: 364 TEFFY 378 FFY Sbjct: 361 YGFFY 365
>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 42.0 bits (97), Expect = 0.001 Identities = 32/125 (25%), Positives = 55/125 (44%) Frame = +1 Query: 4 VQNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTR 183 +Q RGS+PLFW Q ++ + + A HF L+ YG I++ NL+ ++ Sbjct: 247 IQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKDLYGKQIVV-NLLGSK 305 Query: 184 ERRESMLRREFDKAIRIINQLFSEENHLRFLHWDLHKNSEGKPTNVLDVLLKVAFRALRL 363 E E ML + F ++ + + + +D H+ +G L +LK + Sbjct: 306 E-GEHMLSKAFQSHLK----ASEHASDIHMVSFDYHQMVKGGKAEKLHSVLKPQVQKFLD 360 Query: 364 TEFFY 378 FFY Sbjct: 361 YGFFY 365
>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150) (Fragment) Length = 1324 Score = 41.2 bits (95), Expect = 0.002 Identities = 30/112 (26%), Positives = 52/112 (46%) Frame = +1 Query: 4 VQNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTR 183 +Q RGS+PLFW Q ++ + + A HF L+ YG II+ NL+ ++ Sbjct: 247 IQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIV-NLLGSK 305 Query: 184 ERRESMLRREFDKAIRIINQLFSEENHLRFLHWDLHKNSEGKPTNVLDVLLK 339 E E ML + F ++ ++ +++D H+ +G L +LK Sbjct: 306 E-GEHMLSKAFQSHLKASEHAAD----IQMVNFDYHQMVKGGKAEKLHSVLK 352
>YIA2_YEAST (P40559) Hypothetical 108.4 kDa protein in BET1-PAN1 intergenic| region Length = 946 Score = 38.5 bits (88), Expect = 0.015 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 6/88 (6%) Frame = +1 Query: 7 QNRGSIPLFWSQDTSKLNIKPDI-ILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTR 183 Q GSIPLFW S+L I + + + A HF+NL +YG + I+N+IK + Sbjct: 292 QVNGSIPLFWESVESQLLYGKKIKVTKDSIEAQGAFDRHFDNLTSKYG-VVSIVNIIKPK 350 Query: 184 ERRESMLRREF-----DKAIRIINQLFS 252 + L + K I+I N +S Sbjct: 351 SESQEKLALTYKDCAESKGIKITNIEYS 378
>SYNJ2_MOUSE (Q9D2G5) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1434 Score = 38.1 bits (87), Expect = 0.020 Identities = 29/112 (25%), Positives = 53/112 (47%) Frame = +1 Query: 4 VQNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTR 183 VQ RGS+PLFW Q ++ + + A + H L+ +YG +++ NL+ +R Sbjct: 249 VQIRGSVPLFWEQPGLQVGSHHLRLHRGLEANAPAFERHMVLLKEQYGKQVVV-NLLGSR 307 Query: 184 ERRESMLRREFDKAIRIINQLFSEENHLRFLHWDLHKNSEGKPTNVLDVLLK 339 E +L R F K + +++D H+ ++G+ L+ LL+ Sbjct: 308 -GGEEVLNRAFKKLL----WASCHAGDTPMINFDFHQFAKGRKLEKLENLLR 354
>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 38.1 bits (87), Expect = 0.020 Identities = 29/112 (25%), Positives = 53/112 (47%) Frame = +1 Query: 4 VQNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTR 183 VQ RGS+PLFW Q ++ + + A + H L+ +YG +++ NL+ +R Sbjct: 249 VQIRGSVPLFWEQPGLQVGSHHLRLHRGLEANAPAFERHMVLLKEQYGQQVVV-NLLGSR 307 Query: 184 ERRESMLRREFDKAIRIINQLFSEENHLRFLHWDLHKNSEGKPTNVLDVLLK 339 E +L R F K + +++D H+ ++G+ L+ LL+ Sbjct: 308 -GGEEVLNRAFKKLL----WASCHAGDTPMINFDFHQFAKGRKLEKLENLLR 354
>SYNJ2_HUMAN (O15056) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 37.0 bits (84), Expect = 0.044 Identities = 29/112 (25%), Positives = 51/112 (45%) Frame = +1 Query: 4 VQNRGSIPLFWSQDTSKLNIKPDIILHEKDKTYEATKLHFENLRGRYGNPIIILNLIKTR 183 VQ RGS+PLFW Q ++ + + A H L+ +YG +++ NL+ +R Sbjct: 249 VQIRGSVPLFWEQPGLQVGSHHLRLHRGLEANAPAFDRHMVLLKEQYGQQVVV-NLLGSR 307 Query: 184 ERRESMLRREFDKAIRIINQLFSEENHLRFLHWDLHKNSEGKPTNVLDVLLK 339 E +L R F K + +++D H+ ++G L+ LL+ Sbjct: 308 -GGEEVLNRAFKKLL----WASCHAGDTPMINFDFHQFAKGGKLEKLETLLR 354
>LARG2_HUMAN (Q8N3Y3) Glycosyltransferase-like protein LARGE2 (EC 2.4.-.-)| (Glycosyltransferase-like 1B) Length = 721 Score = 30.8 bits (68), Expect = 3.2 Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 11/86 (12%) Frame = +1 Query: 232 IINQLFSEENHLRFLHWDLHKNSEGKPTNVLDVLLKVAFRALRLT-----------EFFY 378 + + +SE + L+ +HW+ K K +V FR LT E F Sbjct: 324 LAERCYSEASDLKVIHWNSPKKLRVKNKHV------EFFRNFYLTFLEYDGNLLRRELFV 377 Query: 379 CQVAPPTGSETAPHWPALLHSHDPYF 456 C PP G+E A L DP F Sbjct: 378 CPSQPPPGAEQLQQALAQLDEEDPCF 403
>PTTG_RAT (Q6P767) Pituitary tumor-transforming gene 1 protein-interacting| protein precursor (Pituitary tumor-transforming gene protein-binding factor) (PTTG-binding factor) (PBF) Length = 174 Score = 30.4 bits (67), Expect = 4.2 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = -2 Query: 493 LLGI---CHCCCFHHKNMDHDCAIEQASEEQSQTL*VVQLDNRRTQSTSEHE 347 LLGI C CCC ++ D + E+A EQ + V+ + RR + S H+ Sbjct: 107 LLGITVCCCCCCRRKRSRKPDKSDERAMREQEERR--VRQEERRAEMKSRHD 156
>PTTG_MOUSE (Q8R143) Pituitary tumor-transforming gene 1 protein-interacting| protein precursor (Pituitary tumor-transforming gene protein-binding factor) (PTTG-binding factor) (PBF) Length = 174 Score = 30.0 bits (66), Expect = 5.4 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = -2 Query: 493 LLGICHCCCF---HHKNMDHDCAIEQASEEQSQTL*VVQLDNRRTQSTSEHE 347 LLGI CCC+ K+ D + E+A EQ + V+ + RR + S H+ Sbjct: 107 LLGITVCCCYCCRRKKSRKPDKSDERAMREQEERR--VRQEERRAEMKSRHD 156
>AMPA_CLOPE (Q8XHI3) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 493 Score = 29.6 bits (65), Expect = 7.1 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = +1 Query: 154 IIILNLIKTRERRESMLRREFDKAIRIINQLFSEENHLRF 273 II+L L K E + +RR F KA+ I +L S+ LRF Sbjct: 67 IILLGLGKETEITKEKIRRAFGKAVNEIKRLKSKSVFLRF 106
>Y2014_MYCBO (P64912) Hypothetical protein Mb2014c| Length = 114 Score = 29.6 bits (65), Expect = 7.1 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 367 EFFYCQVAPPTGSETAPHWPALLHSHDPY 453 E ++ + PP+GS+ A P L+ DPY Sbjct: 7 EIYWADLGPPSGSQPAKRRPVLVIQSDPY 35
>Y1991_MYCTU (P64911) Hypothetical protein Rv1991c/MT2046| Length = 114 Score = 29.6 bits (65), Expect = 7.1 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 367 EFFYCQVAPPTGSETAPHWPALLHSHDPY 453 E ++ + PP+GS+ A P L+ DPY Sbjct: 7 EIYWADLGPPSGSQPAKRRPVLVIQSDPY 35 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,300,486 Number of Sequences: 219361 Number of extensions: 1524583 Number of successful extensions: 3948 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3821 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3931 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
