ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags24i16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK070888.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 9e-43
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
3dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
4ref|XM_507012.1| PREDICTED Oryza sativa (japonica cultivar-group... 115 2e-22
5dbj|AK065621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 2e-22
6dbj|AK068103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
8dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
10dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
11gb|AY104833.1| Zea mays PCO094291 mRNA sequence 88 4e-14
12ref|XM_470554.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
13dbj|AK100037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 5e-04
15gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nippon... 54 5e-04
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
17gb|BC076552.1| Danio rerio zgc:92448, mRNA (cDNA clone MGC:92448... 44 0.53
18emb|AL139327.18| Human DNA sequence from clone RP11-408E5 on chr... 44 0.53
19ref|NM_001002665.1| Danio rerio zgc:92448 (zgc:92448), mRNA 44 0.53
20gb|DQ422808.1| Homo sapiens tubulin, alpha 2 (TUBA2) gene, compl... 44 0.53
21emb|BX470236.11| Zebrafish DNA sequence from clone DKEY-99O1 in ... 44 0.53
22gb|AC097711.2| Homo sapiens BAC clone RP11-162K6 from 4, complet... 44 0.53
23emb|BX901962.8| Zebrafish DNA sequence from clone DKEY-153K10 in... 44 0.53
24emb|AL390036.17| Human DNA sequence from clone RP11-356N1 on chr... 42 2.1
25emb|AL356971.10| Human DNA sequence from clone RP11-58A9 on chro... 42 2.1
26gb|AC079075.6| Homo sapiens chromosome 15, clone RP11-300G22, co... 42 2.1
27dbj|AK148622.1| Mus musculus 2 days neonate sympathetic ganglion... 42 2.1
28dbj|AK035112.1| Mus musculus 12 days embryo embryonic body betwe... 42 2.1
29gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold 42 2.1
30gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome... 42 2.1
31gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome... 42 2.1
32gb|AC138391.2| Homo sapiens chromosome 3 clone RP11-167C9, compl... 42 2.1
33gb|AC006265.1|AC006265 Homo sapiens chromosome 17, clone hRPK.56... 42 2.1
34dbj|AP006258.1| Homo sapiens genomic DNA, chromosome 11, clone:R... 42 2.1
35dbj|AP005639.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.1
36dbj|AP005134.3| Homo sapiens genomic DNA, chromosome 11 clone:CM... 42 2.1
37gb|AY308763.1| Synodus intermedius recombinase activating gene-1... 40 8.2
38ref|NM_122091.2| Arabidopsis thaliana phosphoinositide 5-phospha... 40 8.2
39gb|BC076750.1| Xenopus laevis CDC16 cell division cycle 16 homol... 40 8.2
40gb|AC133902.12| Mus musculus chromosome 10, clone RP24-538B17, c... 40 8.2
41gb|AC149237.1| Pan troglodytes chromosome X clone RP43-049A09 ma... 40 8.2
42gb|AC002457.2| Homo sapiens BAC clone CTB-60P12 from 7, complete... 40 8.2
43gb|AC146054.3| Pan troglodytes BAC clone RP43-78A13 from 7, comp... 40 8.2
44ref|XM_535340.2| PREDICTED: Canis familiaris similar to DnaJ (Hs... 40 8.2
45gb|AC155829.5| Mus musculus 10 BAC RP24-534E16 (Roswell Park Can... 40 8.2
46gb|AC140025.7| Medicago truncatula clone mth2-11i16, complete se... 40 8.2
47emb|AL162580.20| Human DNA sequence from clone RP11-524A17 on ch... 40 8.2
48gb|AY227247.1| Arabidopsis thaliana SAC domain protein 4 (SAC4) ... 40 8.2
49emb|CR388171.5| Zebrafish DNA sequence from clone CH211-261O7, c... 40 8.2
50gb|AY080794.1| Arabidopsis thaliana At5g20840 mRNA sequence 40 8.2
51gb|AC018861.9| Homo sapiens chromosome 8, clone RP11-577N1, comp... 40 8.2
52gb|AC079969.5| Homo sapiens chromosome 15, clone RP11-636P14, co... 40 8.2
53gb|AC097494.3| Homo sapiens BAC clone RP11-273B19 from 4, comple... 40 8.2
54gb|AC093575.2| Homo sapiens chromosome 1 clone RP11-40C18, compl... 40 8.2
55gb|AC058803.5| Homo sapiens chromosome 15, clone RP11-717I24, co... 40 8.2
56gb|AC020559.4|AC020559 Homo sapiens BAC clone RP11-527F13 from 6... 40 8.2
57dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
58gb|AC093589.3| Homo sapiens BAC clone RP11-5K10 from 4, complete... 40 8.2
59gb|AC084374.21| Homo sapiens 12q BAC RP11-134O3 (Roswell Park Ca... 40 8.2
60dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
61dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
62gb|AC091780.14| Homo sapiens 3 BAC RP11-104G4 (Roswell Park Canc... 40 8.2
63gb|AC005731.2| Human X BAC RP11-159I8 (Roswell Park Cancer Insti... 40 8.2
64ref|XM_577207.1| PREDICTED: Rattus norvegicus similar to dentin ... 40 8.2
65gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 40 8.2
66gb|AC090358.16| Homo sapiens chromosome 18, clone RP11-775G23, c... 40 8.2
67dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
68gb|AC117205.3| Mus musculus BAC clone RP23-257K20 from 10, compl... 40 8.2
69emb|AL133162.4|CNS01DU5 Human chromosome 14 DNA sequence BAC C-2... 40 8.2
70gb|AY910577.1| Homo sapiens ATP-binding cassette, sub-family B (... 40 8.2
71gb|AY700337.1| Brachaluteres jacksonianus isolate MO12 recombina... 40 8.2
72gb|AC118643.6| Mus musculus chromosome 1, clone RP24-113H21, com... 40 8.2
73gb|AC000098.1|YUP8H12 Arabidopsis thaliana chromosome 1 YAC yUP8... 40 8.2
74gb|DQ294642.1| Rorippa sylvestris clone RS 44 microsatellite seq... 40 8.2
75gb|M90692.1|TOMPAL5A Lycopersicon esculentum phenylalanine ammon... 40 8.2 
>dbj|AK070888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072F08, full
            insert sequence
          Length = 3224

 Score =  182 bits (92), Expect = 9e-43
 Identities = 269/326 (82%), Gaps = 8/326 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1    gttgtgcagaacaggggttcgatcccgctattctggtcacaggatacatcnaagttgaac 60
            |||||||||||||| ||||| || || ||||||||||| ||||| ||||| ||| |||| 
Sbjct: 1175 gttgtgcagaacagaggttccattcccctattctggtctcaggagacatccaagctgaat 1234

                                                                        
Query: 61   ataaaacctgatatcatattgcatgagaaggacaaaacttatgaagctaccaagcttcat 120
             | || |||||||||||||||||||| |||||||| | ||||||||||||||  ||||||
Sbjct: 1235 cttaagcctgatatcatattgcatgaaaaggacaagaattatgaagctaccagacttcat 1294

                                                                        
Query: 121  ttcgaaaatcttaggggaagatatggcaaccctataattatcttaaacttgattaagacg 180
            || ||||||||||||  ||||||||| || |||||||| ||| |||||||||||||||  
Sbjct: 1295 tttgaaaatcttaggataagatatggaaatcctataatcatcctaaacttgattaagaaa 1354

                                                                        
Query: 181  cgtgaaag------acgggaatccatgcttcgtcgagaatttgataaggcaataaggatc 234
            ||||| ||      ||| ||||| || || ||  | ||||||||||| ||||||| ||| 
Sbjct: 1355 cgtgagaggaggccacgtgaatctatactccgcagtgaatttgataaagcaataaagatt 1414

                                                                        
Query: 235  ataaatcaattat-tttcagaggagaaccatctgcggttcttacattgggatcttcataa 293
            |||||| ||| || |  ||| ||| || |||||||| || ||||||||||||||||||||
Sbjct: 1415 ataaat-aatgatctaccaggggaaaatcatctgcgatttttacattgggatcttcataa 1473

                                      
Query: 294  aaactctgaaggaaaacctacaaatg 319
            ||||||| || |||||  ||||||||
Sbjct: 1474 aaactctcaaagaaaaagtacaaatg 1499
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  157 bits (79), Expect = 5e-35
 Identities = 118/131 (90%)
 Strand = Plus / Plus

                                                                            
Query: 305      gaaaacctacaaatgtacttgatgttcttctgaaagtggcatttcgtgctctgaggttga 364
                |||||||||||||||| |||||||||||| |||||||||| || ||||||||||||||||
Sbjct: 33212771 gaaaacctacaaatgtgcttgatgttcttttgaaagtggcgttccgtgctctgaggttga 33212830

                                                                            
Query: 365      ctgagttcttctattgtcaagttgcaccacctacagggtctgagactgctcctcactggc 424
                |||||||||||||||||||| |||||||| |||| || ||||| ||||||| ||| ||||
Sbjct: 33212831 ctgagttcttctattgtcaacttgcaccatctaccggatctgatactgctcatcattggc 33212890

                           
Query: 425      ctgctctattg 435
                || | ||||||
Sbjct: 33212891 cttccctattg 33212901



 Score =  115 bits (58), Expect = 2e-22
 Identities = 112/130 (86%)
 Strand = Plus / Plus

                                                                            
Query: 476      gtgacatatcccaagaagatatctcgggcagttctgactcctctggcaatggaaccacag 535
                ||||||||||||||||||| ||||| ||||| ||||| |||||| |||||||||| ||||
Sbjct: 33213084 gtgacatatcccaagaagacatctctggcagctctgattcctcttgcaatggaactacag 33213143

                                                                            
Query: 536      aagataaagctgaaaccagtgaactcccccaactaaaaccaccaatattccaaaaagggg 595
                | ||||||||||||| ||  |||   || | |||||||||||||| ||||||||| || |
Sbjct: 33213144 aggataaagctgaaaacaacgaatcacctccactaaaaccaccaaaattccaaaagggtg 33213203

                          
Query: 596      tcttacggac 605
                ||||||||||
Sbjct: 33213204 tcttacggac 33213213



 Score =  103 bits (52), Expect = 7e-19
 Identities = 72/79 (91%)
 Strand = Plus / Plus

                                                                            
Query: 1        gttgtgcagaacaggggttcgatcccgctattctggtcacaggatacatcnaagttgaac 60
                |||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||| |||||
Sbjct: 33212193 gttgtgcagaacaggggttcaatcccgctattttggtcacaggagacatcaaagatgaac 33212252

                                   
Query: 61       ataaaacctgatatcatat 79
                || ||||||||||| ||||
Sbjct: 33212253 attaaacctgatattatat 33212271



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                            
Query: 99       ttatgaagctaccaagcttcatttcgaaaatcttaggggaagatatggcaaccctataat 158
                |||||||||||| | ||| ||||| || ||||||||| ||||||||||  | ||||| ||
Sbjct: 33212369 ttatgaagctactaggctgcattttgagaatcttaggagaagatatggagatcctatcat 33212428

                                   
Query: 159      tatcttaaacttgattaag 177
                ||| |||||||||||||||
Sbjct: 33212429 tattttaaacttgattaag 33212447



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 251      cagaggagaaccatctgcggttcttacattgggatcttcataaaaactct 300
                ||||||| || ||| || ||||||| ||||||||||||||| ||||||||
Sbjct: 33212638 cagaggaaaatcatttgaggttcttgcattgggatcttcatgaaaactct 33212687
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>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1311_D08
          Length = 163702

 Score =  157 bits (79), Expect = 5e-35
 Identities = 118/131 (90%)
 Strand = Plus / Plus

                                                                         
Query: 305   gaaaacctacaaatgtacttgatgttcttctgaaagtggcatttcgtgctctgaggttga 364
             |||||||||||||||| |||||||||||| |||||||||| || ||||||||||||||||
Sbjct: 42080 gaaaacctacaaatgtgcttgatgttcttttgaaagtggcgttccgtgctctgaggttga 42139

                                                                         
Query: 365   ctgagttcttctattgtcaagttgcaccacctacagggtctgagactgctcctcactggc 424
             |||||||||||||||||||| |||||||| |||| || ||||| ||||||| ||| ||||
Sbjct: 42140 ctgagttcttctattgtcaacttgcaccatctaccggatctgatactgctcatcattggc 42199

                        
Query: 425   ctgctctattg 435
             || | ||||||
Sbjct: 42200 cttccctattg 42210



 Score =  115 bits (58), Expect = 2e-22
 Identities = 112/130 (86%)
 Strand = Plus / Plus

                                                                         
Query: 476   gtgacatatcccaagaagatatctcgggcagttctgactcctctggcaatggaaccacag 535
             ||||||||||||||||||| ||||| ||||| ||||| |||||| |||||||||| ||||
Sbjct: 42393 gtgacatatcccaagaagacatctctggcagctctgattcctcttgcaatggaactacag 42452

                                                                         
Query: 536   aagataaagctgaaaccagtgaactcccccaactaaaaccaccaatattccaaaaagggg 595
             | ||||||||||||| ||  |||   || | |||||||||||||| ||||||||| || |
Sbjct: 42453 aggataaagctgaaaacaacgaatcacctccactaaaaccaccaaaattccaaaagggtg 42512

                       
Query: 596   tcttacggac 605
             ||||||||||
Sbjct: 42513 tcttacggac 42522



 Score =  103 bits (52), Expect = 7e-19
 Identities = 72/79 (91%)
 Strand = Plus / Plus

                                                                         
Query: 1     gttgtgcagaacaggggttcgatcccgctattctggtcacaggatacatcnaagttgaac 60
             |||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||| |||||
Sbjct: 41502 gttgtgcagaacaggggttcaatcccgctattttggtcacaggagacatcaaagatgaac 41561

                                
Query: 61    ataaaacctgatatcatat 79
             || ||||||||||| ||||
Sbjct: 41562 attaaacctgatattatat 41580



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                         
Query: 99    ttatgaagctaccaagcttcatttcgaaaatcttaggggaagatatggcaaccctataat 158
             |||||||||||| | ||| ||||| || ||||||||| ||||||||||  | ||||| ||
Sbjct: 41678 ttatgaagctactaggctgcattttgagaatcttaggagaagatatggagatcctatcat 41737

                                
Query: 159   tatcttaaacttgattaag 177
             ||| |||||||||||||||
Sbjct: 41738 tattttaaacttgattaag 41756



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 251   cagaggagaaccatctgcggttcttacattgggatcttcataaaaactct 300
             ||||||| || ||| || ||||||| ||||||||||||||| ||||||||
Sbjct: 41947 cagaggaaaatcatttgaggttcttgcattgggatcttcatgaaaactct 41996
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>ref|XM_507012.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1311_D08.7 mRNA
          Length = 1491

 Score =  115 bits (58), Expect = 2e-22
 Identities = 112/130 (86%)
 Strand = Plus / Plus

                                                                       
Query: 476 gtgacatatcccaagaagatatctcgggcagttctgactcctctggcaatggaaccacag 535
           ||||||||||||||||||| ||||| ||||| ||||| |||||| |||||||||| ||||
Sbjct: 56  gtgacatatcccaagaagacatctctggcagctctgattcctcttgcaatggaactacag 115

                                                                       
Query: 536 aagataaagctgaaaccagtgaactcccccaactaaaaccaccaatattccaaaaagggg 595
           | ||||||||||||| ||  |||   || | |||||||||||||| ||||||||| || |
Sbjct: 116 aggataaagctgaaaacaacgaatcacctccactaaaaccaccaaaattccaaaagggtg 175

                     
Query: 596 tcttacggac 605
           ||||||||||
Sbjct: 176 tcttacggac 185
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>dbj|AK065621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031I20, full
           insert sequence
          Length = 1491

 Score =  115 bits (58), Expect = 2e-22
 Identities = 112/130 (86%)
 Strand = Plus / Plus

                                                                       
Query: 476 gtgacatatcccaagaagatatctcgggcagttctgactcctctggcaatggaaccacag 535
           ||||||||||||||||||| ||||| ||||| ||||| |||||| |||||||||| ||||
Sbjct: 56  gtgacatatcccaagaagacatctctggcagctctgattcctcttgcaatggaactacag 115

                                                                       
Query: 536 aagataaagctgaaaccagtgaactcccccaactaaaaccaccaatattccaaaaagggg 595
           | ||||||||||||| ||  |||   || | |||||||||||||| ||||||||| || |
Sbjct: 116 aggataaagctgaaaacaacgaatcacctccactaaaaccaccaaaattccaaaagggtg 175

                     
Query: 596 tcttacggac 605
           ||||||||||
Sbjct: 176 tcttacggac 185
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>dbj|AK068103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129K12, full
            insert sequence
          Length = 2482

 Score =  105 bits (53), Expect = 2e-19
 Identities = 93/105 (88%), Gaps = 1/105 (0%)
 Strand = Plus / Plus

                                                                        
Query: 269  ggttcttacattgggatcttcataaaaactctgaaggaaaacctacaaatgtacttgatg 328
            ||||||| ||||||||||||||| |||||||   || |||||||| |||||| |||||||
Sbjct: 1826 ggttcttgcattgggatcttcatgaaaactccctag-aaaacctataaatgtgcttgatg 1884

                                                         
Query: 329  ttcttctgaaagtggcatttcgtgctctgaggttgactgagttct 373
            ||||| | |||||||| || |||||||||||||||||||||||||
Sbjct: 1885 ttcttttaaaagtggcgttccgtgctctgaggttgactgagttct 1929



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 322  cttgatgttcttctgaaagtggcatttcgtgc 353
            |||||||||||| |||||||||| || |||||
Sbjct: 1938 cttgatgttcttttgaaagtggcgttccgtgc 1969
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                           
Query: 80      tgcatgagaaggacaaaacttatgaagctaccaagcttcatttcgaaaatcttaggggaa 139
               ||||||| |||||||| | ||||||||||||||  |||||||| ||||||||||||  ||
Sbjct: 4861100 tgcatgaaaaggacaagaattatgaagctaccagacttcattttgaaaatcttaggataa 4861041

                                                     
Query: 140     gatatggcaaccctataattatcttaaacttgattaag 177
               ||||||| || |||||||| ||| ||||||||||||||
Sbjct: 4861040 gatatggaaatcctataatcatcctaaacttgattaag 4861003



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                           
Query: 1       gttgtgcagaacaggggttcgatcccgctattctggtcacaggatacatcnaagttgaac 60
               |||||||||||||| ||||| || || ||||||||||| ||||| ||||| ||| |||| 
Sbjct: 4861250 gttgtgcagaacagaggttccattcccctattctggtctcaggagacatccaagctgaat 4861191

                                  
Query: 61      ataaaacctgatatcatat 79
                | || |||||||||||||
Sbjct: 4861190 cttaagcctgatatcatat 4861172



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                      
Query: 262     catctgcggttcttacattgggatcttcataaaaactct 300
               |||||||| || |||||||||||||||||||||||||||
Sbjct: 4860741 catctgcgatttttacattgggatcttcataaaaactct 4860703
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>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528E04
          Length = 170701

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                         
Query: 80    tgcatgagaaggacaaaacttatgaagctaccaagcttcatttcgaaaatcttaggggaa 139
             ||||||| |||||||| | ||||||||||||||  |||||||| ||||||||||||  ||
Sbjct: 48583 tgcatgaaaaggacaagaattatgaagctaccagacttcattttgaaaatcttaggataa 48524

                                                   
Query: 140   gatatggcaaccctataattatcttaaacttgattaag 177
             ||||||| || |||||||| ||| ||||||||||||||
Sbjct: 48523 gatatggaaatcctataatcatcctaaacttgattaag 48486



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                         
Query: 1     gttgtgcagaacaggggttcgatcccgctattctggtcacaggatacatcnaagttgaac 60
             |||||||||||||| ||||| || || ||||||||||| ||||| ||||| ||| |||| 
Sbjct: 48733 gttgtgcagaacagaggttccattcccctattctggtctcaggagacatccaagctgaat 48674

                                
Query: 61    ataaaacctgatatcatat 79
              | || |||||||||||||
Sbjct: 48673 cttaagcctgatatcatat 48655



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                    
Query: 262   catctgcggttcttacattgggatcttcataaaaactct 300
             |||||||| || |||||||||||||||||||||||||||
Sbjct: 48224 catctgcgatttttacattgggatcttcataaaaactct 48186
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                            
Query: 305      gaaaacctacaaatgtacttgatgttcttctgaaagtggcatttcgtgctctgaggttga 364
                ||||||||| |||||| |||||||||||| | |||||||| || ||||||||||||||||
Sbjct: 13473241 gaaaacctataaatgtgcttgatgttcttttaaaagtggcgttccgtgctctgaggttga 13473182

                         
Query: 365      ctgagttct 373
                |||||||||
Sbjct: 13473181 ctgagttct 13473173



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 269      ggttcttacattgggatcttcataaaaactc 299
                ||||||| ||||||||||||||| |||||||
Sbjct: 13473357 ggttcttgcattgggatcttcatgaaaactc 13473327



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 322      cttgatgttcttctgaaagtggcatttcgtgc 353
                |||||||||||| |||||||||| || |||||
Sbjct: 13473164 cttgatgttcttttgaaagtggcgttccgtgc 13473133



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 387      tgcaccacctacagggtctgagactgctcctcactggcct 426
                ||||||||||||  ||||||| ||||||| ||| ||||||
Sbjct: 13473135 tgcaccacctaccaggtctgatactgctcatcattggcct 13473096
to top
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1123E10
          Length = 134641

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                         
Query: 305   gaaaacctacaaatgtacttgatgttcttctgaaagtggcatttcgtgctctgaggttga 364
             ||||||||| |||||| |||||||||||| | |||||||| || ||||||||||||||||
Sbjct: 52924 gaaaacctataaatgtgcttgatgttcttttaaaagtggcgttccgtgctctgaggttga 52865

                      
Query: 365   ctgagttct 373
             |||||||||
Sbjct: 52864 ctgagttct 52856



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 269   ggttcttacattgggatcttcataaaaactc 299
             ||||||| ||||||||||||||| |||||||
Sbjct: 53040 ggttcttgcattgggatcttcatgaaaactc 53010



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 322   cttgatgttcttctgaaagtggcatttcgtgc 353
             |||||||||||| |||||||||| || |||||
Sbjct: 52847 cttgatgttcttttgaaagtggcgttccgtgc 52816



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 387   tgcaccacctacagggtctgagactgctcctcactggcct 426
             ||||||||||||  ||||||| ||||||| ||| ||||||
Sbjct: 52818 tgcaccacctaccaggtctgatactgctcatcattggcct 52779
to top
>gb|AY104833.1| Zea mays PCO094291 mRNA sequence
          Length = 1256

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                       
Query: 482 tatcccaagaagatatctcgggcagttctgactcctctggcaatggaaccacagaagata 541
           |||||||||| |||||||| ||||| ||||| |||||||| |||| ||||||||||||||
Sbjct: 51  tatcccaagaggatatctcaggcagctctgattcctctggtaatgcaaccacagaagata 110

                                                               
Query: 542 aagctgaaaccagtgaactcccccaactaaaaccaccaatattccaaaaagg 593
           ||  ||| |  |||| ||| || | || ||||||||||| ||||||||||||
Sbjct: 111 aatttgagaatagtggactgccaccaccaaaaccaccaaaattccaaaaagg 162
to top
>ref|XM_470554.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2340

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                           
Query: 139  agatatggcaaccctataattatcttaaacttgattaagacgcgtga 185
            |||||||| ||||| |||||||||||||||||||| ||||| |||||
Sbjct: 967  agatatgggaacccaataattatcttaaacttgatcaagactcgtga 1013
to top
>dbj|AK100037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151A15, full
            insert sequence
          Length = 3741

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                           
Query: 139  agatatggcaaccctataattatcttaaacttgattaagacgcgtga 185
            |||||||| ||||| |||||||||||||||||||| ||||| |||||
Sbjct: 1543 agatatgggaacccaataattatcttaaacttgatcaagactcgtga 1589
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 139     agatatggcaaccctataattatcttaaacttgat 173
               |||||||| ||||| ||||||||||||||||||||
Sbjct: 4313304 agatatgggaacccaataattatcttaaacttgat 4313338
to top
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 139    agatatggcaaccctataattatcttaaacttgat 173
              |||||||| ||||| ||||||||||||||||||||
Sbjct: 113193 agatatgggaacccaataattatcttaaacttgat 113159
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 139     agatatggcaaccctataattatcttaaacttgat 173
               |||||||| ||||| ||||||||||||||||||||
Sbjct: 4313419 agatatgggaacccaataattatcttaaacttgat 4313453
to top
>gb|BC076552.1| Danio rerio zgc:92448, mRNA (cDNA clone MGC:92448 IMAGE:7041530),
            complete cds
          Length = 2750

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 408  gactgctcctcactggcctgctctattgca 437
            |||||||||||||||| || ||||||||||
Sbjct: 1831 gactgctcctcactgggctcctctattgca 1802
to top
>emb|AL139327.18| Human DNA sequence from clone RP11-408E5 on chromosome 13q11-12.2
             Contains an FSH primary respone homolog 1 (FSHPRH1)
             pseudogene, a paraspeckle protein 1 alpha pseudogene,a
             novel gene, the TUBA2 gene for tubulin alpha 2, two novel
             pseudogenes and a gene for a novel protein similar to
             DMPK-like CDC42-binding protein kinase beta (CDC42BPB),
             complete sequence
          Length = 149559

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 455   tttgtgatgaaaacagcaacag 476
             ||||||||||||||||||||||
Sbjct: 47817 tttgtgatgaaaacagcaacag 47838
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>ref|NM_001002665.1| Danio rerio zgc:92448 (zgc:92448), mRNA
          Length = 2750

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 408  gactgctcctcactggcctgctctattgca 437
            |||||||||||||||| || ||||||||||
Sbjct: 1831 gactgctcctcactgggctcctctattgca 1802
to top
>gb|DQ422808.1| Homo sapiens tubulin, alpha 2 (TUBA2) gene, complete cds
          Length = 12021

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 455  tttgtgatgaaaacagcaacag 476
            ||||||||||||||||||||||
Sbjct: 9128 tttgtgatgaaaacagcaacag 9107
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>emb|BX470236.11| Zebrafish DNA sequence from clone DKEY-99O1 in linkage group 4, complete
              sequence
          Length = 144523

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 408    gactgctcctcactggcctgctctattgca 437
              |||||||||||||||| || ||||||||||
Sbjct: 129044 gactgctcctcactgggctcctctattgca 129073
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>gb|AC097711.2| Homo sapiens BAC clone RP11-162K6 from 4, complete sequence
          Length = 114657

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 235    ataaatcaattattttcagagg 256
              ||||||||||||||||||||||
Sbjct: 111051 ataaatcaattattttcagagg 111030
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>emb|BX901962.8| Zebrafish DNA sequence from clone DKEY-153K10 in linkage group 4,
             complete sequence
          Length = 182550

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 408   gactgctcctcactggcctgctctattgca 437
             |||||||||||||||| || ||||||||||
Sbjct: 81671 gactgctcctcactgggctcctctattgca 81700
to top
>emb|AL390036.17| Human DNA sequence from clone RP11-356N1 on chromosome 1 Contains the
             3' end of a novel gene, a novel gene, the 3' end of the
             SLC25A24 gene for solute carrier family 25 (mitochondrial
             carrier; phosphate carrier) member 24 and two CpG islands,
             complete sequence
          Length = 183037

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 537   agataaagctgaaaccagtga 557
             |||||||||||||||||||||
Sbjct: 30086 agataaagctgaaaccagtga 30066
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>emb|AL356971.10| Human DNA sequence from clone RP11-58A9 on chromosome 6, complete
              sequence
          Length = 116576

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 144    tggcaaccctataattatctt 164
              |||||||||||||||||||||
Sbjct: 107245 tggcaaccctataattatctt 107265
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>gb|AC079075.6| Homo sapiens chromosome 15, clone RP11-300G22, complete sequence
          Length = 209955

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 404   ctgagactgctcctcactggcctgc 428
             ||||| |||||||||||||||||||
Sbjct: 55317 ctgagcctgctcctcactggcctgc 55293
to top
>dbj|AK148622.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
           full-length enriched library, clone:7120425I21
           product:unclassifiable, full insert sequence
          Length = 372

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 534 agaagataaagctgaaaccag 554
           |||||||||||||||||||||
Sbjct: 67  agaagataaagctgaaaccag 87
to top
>dbj|AK035112.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430089J01 product:unclassifiable, full insert
            sequence
          Length = 1787

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 534  agaagataaagctgaaaccag 554
            |||||||||||||||||||||
Sbjct: 1390 agaagataaagctgaaaccag 1410
to top
>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold
          Length = 1570569

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 449    catatttttgtgatgaaaaca 469
              |||||||||||||||||||||
Sbjct: 419713 catatttttgtgatgaaaaca 419733
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>gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome 5, complete sequence
          Length = 229269

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 534    agaagataaagctgaaaccag 554
              |||||||||||||||||||||
Sbjct: 208634 agaagataaagctgaaaccag 208654
to top
>gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome 5, complete sequence
          Length = 207846

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 534   agaagataaagctgaaaccag 554
             |||||||||||||||||||||
Sbjct: 24628 agaagataaagctgaaaccag 24648
to top
>gb|AC138391.2| Homo sapiens chromosome 3 clone RP11-167C9, complete sequence
          Length = 184254

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 458   gtgatgaaaacagcaacagtg 478
             |||||||||||||||||||||
Sbjct: 85081 gtgatgaaaacagcaacagtg 85061
to top
>gb|AC006265.1|AC006265 Homo sapiens chromosome 17, clone hRPK.566_B_16, complete sequence
          Length = 177707

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 144   tggcaaccctataattatctt 164
             |||||||||||||||||||||
Sbjct: 51956 tggcaaccctataattatctt 51976
to top
>dbj|AP006258.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-24F19, complete
             sequence
          Length = 174444

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 449   catatttttgtgatgaaaaca 469
             |||||||||||||||||||||
Sbjct: 46013 catatttttgtgatgaaaaca 46033
to top
>dbj|AP005639.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-131J4, complete
             sequence
          Length = 168302

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 449   catatttttgtgatgaaaaca 469
             |||||||||||||||||||||
Sbjct: 31806 catatttttgtgatgaaaaca 31826
to top
>dbj|AP005134.3| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-65J13, complete
             sequence
          Length = 121801

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 449   catatttttgtgatgaaaaca 469
             |||||||||||||||||||||
Sbjct: 13601 catatttttgtgatgaaaaca 13621
to top
>gb|AY308763.1| Synodus intermedius recombinase activating gene-1 (RAG1) gene,
            partial cds
          Length = 1450

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 534  agaagataaagctgaaaccagtga 557
            ||||| ||||||||||||||||||
Sbjct: 1017 agaagttaaagctgaaaccagtga 1040
to top
>ref|NM_122091.2| Arabidopsis thaliana phosphoinositide 5-phosphatase AT5G20840 mRNA,
            complete cds
          Length = 3678

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 1    gttgtgcagaacaggggttcgatcccgctattctggtcacagga 44
            |||||||||||  | || || ||||| |||||||||||||||||
Sbjct: 1527 gttgtgcagaatcgtggctcaatccctctattctggtcacagga 1570
to top
>gb|BC076750.1| Xenopus laevis CDC16 cell division cycle 16 homolog (S. cerevisiae),
            mRNA (cDNA clone MGC:82281 IMAGE:4032664), complete cds
          Length = 2236

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 510  tgactcctctggcaatggaa 529
            ||||||||||||||||||||
Sbjct: 2036 tgactcctctggcaatggaa 2055
to top
>gb|AC133902.12| Mus musculus chromosome 10, clone RP24-538B17, complete sequence
          Length = 199604

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 513   ctcctctggcaatggaaccacaga 536
             |||||||||||||| |||||||||
Sbjct: 26755 ctcctctggcaatgcaaccacaga 26732
to top
>gb|AC149237.1| Pan troglodytes chromosome X clone RP43-049A09 map human ortholog q28,
             complete sequence
          Length = 168371

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   agttcttctattgtcaagtt 387
             ||||||||||||||||||||
Sbjct: 61237 agttcttctattgtcaagtt 61218
to top
>gb|AC002457.2| Homo sapiens BAC clone CTB-60P12 from 7, complete sequence
          Length = 177380

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    tcataaatcaattattttca 252
              ||||||||||||||||||||
Sbjct: 145504 tcataaatcaattattttca 145485
to top
>gb|AC146054.3| Pan troglodytes BAC clone RP43-78A13 from 7, complete sequence
          Length = 155731

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   tcataaatcaattattttca 252
             ||||||||||||||||||||
Sbjct: 84738 tcataaatcaattattttca 84757
to top
>ref|XM_535340.2| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog,
           subfamily C, member 8 (LOC478166), mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 301 gaaggaaaacctacaaatgt 320
           ||||||||||||||||||||
Sbjct: 490 gaaggaaaacctacaaatgt 509
to top
>gb|AC155829.5| Mus musculus 10 BAC RP24-534E16 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 191442

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    ctataattatcttaaacttg 171
              ||||||||||||||||||||
Sbjct: 138265 ctataattatcttaaacttg 138246
to top
>gb|AC140025.7| Medicago truncatula clone mth2-11i16, complete sequence
          Length = 130592

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    tgagaaggacaaaacttatg 103
             ||||||||||||||||||||
Sbjct: 79008 tgagaaggacaaaacttatg 78989
to top
>emb|AL162580.20| Human DNA sequence from clone RP11-524A17 on chromosome 6 Contains a
              novel gene and a protein phosphatase 1 regulatory
              (inhibitor) subunit 14A (PPP1R14A) pseudogene, complete
              sequence
          Length = 171483

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    gatcataaatcaattatttt 250
              ||||||||||||||||||||
Sbjct: 158856 gatcataaatcaattatttt 158875
to top
>gb|AY227247.1| Arabidopsis thaliana SAC domain protein 4 (SAC4) mRNA, complete cds
          Length = 2496

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 1   gttgtgcagaacaggggttcgatcccgctattctggtcacagga 44
           |||||||||||  | || || ||||| |||||||||||||||||
Sbjct: 880 gttgtgcagaatcgtggctcaatccctctattctggtcacagga 923
to top
>emb|CR388171.5| Zebrafish DNA sequence from clone CH211-261O7, complete sequence
          Length = 145218

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 577    ccaatattccaaaaaggggt 596
              ||||||||||||||||||||
Sbjct: 121683 ccaatattccaaaaaggggt 121702
to top
>gb|AY080794.1| Arabidopsis thaliana At5g20840 mRNA sequence
          Length = 3540

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 1    gttgtgcagaacaggggttcgatcccgctattctggtcacagga 44
            |||||||||||  | || || ||||| |||||||||||||||||
Sbjct: 1527 gttgtgcagaatcgtggctcaatccctctattctggtcacagga 1570
to top
>gb|AC018861.9| Homo sapiens chromosome 8, clone RP11-577N1, complete sequence
          Length = 187047

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   taaatcaattattttcagag 255
             ||||||||||||||||||||
Sbjct: 16674 taaatcaattattttcagag 16693
to top
>gb|AC079969.5| Homo sapiens chromosome 15, clone RP11-636P14, complete sequence
          Length = 227506

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    tcttctgaaagtggcatttc 349
              ||||||||||||||||||||
Sbjct: 141433 tcttctgaaagtggcatttc 141414
to top
>gb|AC097494.3| Homo sapiens BAC clone RP11-273B19 from 4, complete sequence
          Length = 144135

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   aaaatcttaggggaagatat 144
             ||||||||||||||||||||
Sbjct: 78861 aaaatcttaggggaagatat 78842
to top
>gb|AC093575.2| Homo sapiens chromosome 1 clone RP11-40C18, complete sequence
          Length = 159238

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   tttgataaggcaataaggat 233
             ||||||||||||||||||||
Sbjct: 71337 tttgataaggcaataaggat 71318
to top
>gb|AC058803.5| Homo sapiens chromosome 15, clone RP11-717I24, complete sequence
          Length = 203493

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  tcttctgaaagtggcatttc 349
            ||||||||||||||||||||
Sbjct: 2010 tcttctgaaagtggcatttc 2029
to top
>gb|AC020559.4|AC020559 Homo sapiens BAC clone RP11-527F13 from 6, complete sequence
          Length = 194079

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   gatcataaatcaattatttt 250
             ||||||||||||||||||||
Sbjct: 81222 gatcataaatcaattatttt 81241
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 148      aaccctataattatcttaaa 167
                ||||||||||||||||||||
Sbjct: 23666762 aaccctataattatcttaaa 23666781



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 432      attgcacagtcatgatccat 451
                ||||||||||||||||||||
Sbjct: 21301876 attgcacagtcatgatccat 21301895
to top
>gb|AC093589.3| Homo sapiens BAC clone RP11-5K10 from 4, complete sequence
          Length = 127763

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 526    ggaaccacagaagataaagctgaa 549
              |||| |||||||||||||||||||
Sbjct: 112220 ggaaacacagaagataaagctgaa 112243
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>gb|AC084374.21| Homo sapiens 12q BAC RP11-134O3 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 122602

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 320   tacttgatgttcttctgaaagtgg 343
             ||||| ||||||||||||||||||
Sbjct: 43927 tacttcatgttcttctgaaagtgg 43950
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>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1085F01
          Length = 163671

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   aaccctataattatcttaaa 167
             ||||||||||||||||||||
Sbjct: 44466 aaccctataattatcttaaa 44485
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>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0496H05
          Length = 147817

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 432   attgcacagtcatgatccat 451
             ||||||||||||||||||||
Sbjct: 23814 attgcacagtcatgatccat 23833
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>gb|AC091780.14| Homo sapiens 3 BAC RP11-104G4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 42081

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 290   ataaaaactctgaaggaaaaccta 313
             |||||||||||||| |||||||||
Sbjct: 15360 ataaaaactctgaaagaaaaccta 15337
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>gb|AC005731.2| Human X BAC RP11-159I8 (Roswell Park Cancer Institute Human BAC
            Library), Cosmid LL0XNC01-3C3 (LLNL X Chromosome
            Library), and BAC GS1-92B2 (Genome Systems Human BAC
            Library) complete sequence
          Length = 143944

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  agttcttctattgtcaagtt 387
            ||||||||||||||||||||
Sbjct: 2058 agttcttctattgtcaagtt 2039
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>ref|XM_577207.1| PREDICTED: Rattus norvegicus similar to dentin sialophosphoprotein
            preproprotein (LOC501798), mRNA
          Length = 2625

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 462  tgaaaacagcaacagtgaca 481
            ||||||||||||||||||||
Sbjct: 1098 tgaaaacagcaacagtgaca 1117
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>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1
          Length = 96102

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 1     gttgtgcagaacaggggttcgatcccgctattctggtcacagga 44
             |||||||||||  | || || ||||| |||||||||||||||||
Sbjct: 10273 gttgtgcagaatcgtggctcaatccctctattctggtcacagga 10230
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>gb|AC090358.16| Homo sapiens chromosome 18, clone RP11-775G23, complete sequence
          Length = 176680

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    ttttgtgatgaaaacagcaa 473
              ||||||||||||||||||||
Sbjct: 139262 ttttgtgatgaaaacagcaa 139281
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>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0518F01
          Length = 154541

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    aaccctataattatcttaaa 167
              ||||||||||||||||||||
Sbjct: 129461 aaccctataattatcttaaa 129480
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>gb|AC117205.3| Mus musculus BAC clone RP23-257K20 from 10, complete sequence
          Length = 177430

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 513   ctcctctggcaatggaaccacaga 536
             |||||||||||||| |||||||||
Sbjct: 47045 ctcctctggcaatgcaaccacaga 47068
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>emb|AL133162.4|CNS01DU5 Human chromosome 14 DNA sequence BAC C-2591A6 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196431

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 290    ataaaaactctgaaggaaaaccta 313
              |||||||||||||| |||||||||
Sbjct: 101982 ataaaaactctgaaagaaaaccta 101959
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>gb|AY910577.1| Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member 1
            (ABCB1) gene, complete cds
          Length = 213010

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  tcataaatcaattattttca 252
            ||||||||||||||||||||
Sbjct: 5343 tcataaatcaattattttca 5362
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>gb|AY700337.1| Brachaluteres jacksonianus isolate MO12 recombinase activating gene 1
            (RAG1) gene, partial cds
          Length = 1392

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 534  agaagataaagctgaaaccagtga 557
            ||||||||||||| ||||||||||
Sbjct: 995  agaagataaagctcaaaccagtga 1018
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>gb|AC118643.6| Mus musculus chromosome 1, clone RP24-113H21, complete sequence
          Length = 184206

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 507    ttctgactcctctggcaatg 526
              ||||||||||||||||||||
Sbjct: 103630 ttctgactcctctggcaatg 103611
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>gb|AC000098.1|YUP8H12 Arabidopsis thaliana chromosome 1 YAC yUP8H12 complete sequence
          Length = 103576

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 562   ccccaactaaaaccaccaat 581
             ||||||||||||||||||||
Sbjct: 95916 ccccaactaaaaccaccaat 95897
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>gb|DQ294642.1| Rorippa sylvestris clone RS 44 microsatellite sequence
          Length = 543

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 1   gttgtgcagaacaggggttcgatcccgctattctggtcacagga 44
           |||||||||||  | || || ||||| |||||||||||||||||
Sbjct: 261 gttgtgcagaatcgtggctcaatccctctattctggtcacagga 304
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>gb|M90692.1|TOMPAL5A Lycopersicon esculentum phenylalanine ammonia-lyase (PAL5) gene,
            complete cds
          Length = 3416

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  atatttttgtgatgaaaaca 469
            ||||||||||||||||||||
Sbjct: 1190 atatttttgtgatgaaaaca 1171


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,867,096
Number of Sequences: 3902068
Number of extensions: 5867096
Number of successful extensions: 115609
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115254
Number of HSP's gapped (non-prelim): 353
length of query: 605
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 582
effective length of database: 17,143,297,704
effective search space: 9977399263728
effective search space used: 9977399263728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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