ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags24i15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009474.1| Triticum aestivum clone wr1.pk0030.f12:fis, full ... 662 0.0
2gb|AY104393.1| Zea mays PCO063492 mRNA sequence 301 1e-78
3gb|BT016256.1| Zea mays clone Contig89 mRNA sequence 188 1e-44
4ref|XM_466019.1| Oryza sativa (japonica cultivar-group), mRNA 155 2e-34
5dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
6gb|AY320036.1| Oryza sativa (japonica cultivar-group) RNA bindin... 131 3e-27
7gb|AY320037.1| Oryza sativa (japonica cultivar-group) RNA bindin... 129 1e-26
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
9dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
10dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
11dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 6e-16
12gb|AC139708.15| Medicago truncatula clone mth2-9f16, complete se... 44 0.52
13emb|BX005103.4| Zebrafish DNA sequence from clone CH211-149O7 in... 44 0.52
14emb|AL929136.5| Mouse DNA sequence from clone RP23-442B16 on chr... 44 0.52
15ref|XM_472372.1| Oryza sativa (japonica cultivar-group), predic... 42 2.1
16emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4,... 42 2.1
17gb|AC087455.7| Homo sapiens, clone RP11-143J24, complete sequence 42 2.1
18gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, co... 42 2.1
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
20gb|AC090963.32| Mus musculus strain C57BL/6J chromosome 17 clone... 42 2.1
21gb|AC090653.36| Mus musculus strain C57BL/6J chromosome 17 clone... 42 2.1
22emb|BX005386.8| Zebrafish DNA sequence from clone DKEY-21M1 in l... 42 2.1
23dbj|AP004932.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 2.1
24ref|NM_111707.2| Arabidopsis thaliana ATPK1; kinase AT3G08730 (A... 40 8.1
25gb|AC008317.7| Drosophila melanogaster clone BACR08N17, complete... 40 8.1
26gb|AC008356.6| Drosophila melanogaster clone BACR43K14, complete... 40 8.1
27gb|AC079405.4| Homo sapiens BAC clone RP11-1150H5 from 7, comple... 40 8.1
28gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, c... 40 8.1
29gb|AC145983.2| Pan troglodytes BAC clone RP43-17E6 from 7, compl... 40 8.1
30gb|L29030.1|ATHATPSAAA Arabidopsis thaliana protein-serine kinas... 40 8.1
31emb|CR769786.9| Zebrafish DNA sequence from clone DKEY-256I5 in ... 40 8.1
32emb|AL590426.6| Human DNA sequence from clone RP11-354K4 on chro... 40 8.1
33emb|AL513523.33| Human DNA sequence from clone RP11-216N14 on ch... 40 8.1
34gb|BT009970.1| Drosophila melanogaster RE63138 full insert cDNA 40 8.1
35emb|AL354830.8| Human DNA sequence from clone RP11-193G17 on chr... 40 8.1
36emb|AL135934.19| Human DNA sequence from clone RP5-945I17 on chr... 40 8.1
37emb|CR788312.9| Zebrafish DNA sequence from clone DKEY-192D9, co... 40 8.1
38gb|AY096555.1| Arabidopsis thaliana putative ribosomal protein S... 40 8.1
39gb|AY065230.1| Arabidopsis thaliana putative ribosomal-protein S... 40 8.1
40emb|X62589.1|DMPUMI D.melanogaster mRNA for pumilio protein 40 8.1
41ref|NM_169260.1| Drosophila melanogaster pumilio CG9755-RB, tran... 40 8.1
42ref|NM_169259.1| Drosophila melanogaster pumilio CG9755-RD, tran... 40 8.1
43ref|NM_169258.1| Drosophila melanogaster pumilio CG9755-RA, tran... 40 8.1
44gb|AC158604.5| Mus musculus 10 BAC RP23-130B2 (Roswell Park Canc... 40 8.1
45gb|L07943.1|DROPUM Drosophila melanogaster pumilio protein (pum)... 40 8.1
46ref|NM_079561.2| Drosophila melanogaster pumilio CG9755-RC, tran... 40 8.1
47gb|AC006122.24| Homo sapiens 12 BAC RP11-264F23 (Roswell Park Ca... 40 8.1
48emb|BX823948.1|CNS0A6IK Arabidopsis thaliana Full-length cDNA Co... 40 8.1
49gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17... 40 8.1
50gb|AC018733.8| Homo sapiens BAC clone RP11-337H6 from 2, complet... 40 8.1
51gb|AC091212.17| Homo sapiens 3 BAC CTD-2021J15 (CalTech Clone Li... 40 8.1
52gb|AY084935.1| Arabidopsis thaliana clone 122224 mRNA, complete ... 40 8.1
53gb|AC145418.5| Dasypus novemcinctus clone VMRC5-458M22, complete... 40 8.1
54dbj|D42056.1|ATHATPK6A Arabidopsis thaliana ATPK6 mRNA for ribos... 40 8.1
55dbj|AB078603.1| Pisum sativum SN4TDR mRNA for 110 kDa 4SNc-Tudor... 40 8.1
56dbj|AB055904.1| Pisum sativum SN4TDR mRNA for 110 kDa 4SNc-Tudor... 40 8.1
57gb|BT021317.1| Drosophila melanogaster RE10602 full insert cDNA 40 8.1
58gb|AE003681.5| Drosophila melanogaster chromosome 3R, section 19... 40 8.1
59gb|AC131795.3| Mus musculus BAC clone RP24-490N11 from 10, compl... 40 8.1
60gb|AC117209.3| Mus musculus BAC clone RP23-281E24 from 10, compl... 40 8.1 
>gb|BT009474.1| Triticum aestivum clone wr1.pk0030.f12:fis, full insert mRNA
           sequence
          Length = 1394

 Score =  662 bits (334), Expect = 0.0
 Identities = 427/458 (93%)
 Strand = Plus / Plus

                                                                       
Query: 141 ggacagaatgctatgcctgcagtgagctcggctgatactagagttttggattatggttca 200
           |||||||||||| |||||| | ||| |||||||||||| |||||||||||||||||||||
Sbjct: 8   ggacagaatgctgtgcctgtaatgaactcggctgataccagagttttggattatggttca 67

                                                                       
Query: 201 gtttttctaggttcgccatcgcaggccgatggtgatgacacatcttctgttccgagcaca 260
           |||||||||||||||||||| | ||| || || |||||||||||||||| ||| ||||||
Sbjct: 68  gtttttctaggttcgccatcaccggcggacggagatgacacatcttctgctccaagcaca 127

                                                                       
Query: 261 ggcacccagcctaaaattaatgttgctgagcttttgctctcacggggctttgctgcgata 320
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 128 ggcacccagcctaaaattaatgttgctgagcttttgctctcacggggcttcgctgagata 187

                                                                       
Query: 321 tcaaaacaccgtgactatgaggaaagatcacattattttgatgctctattagcagcgcac 380
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||
Sbjct: 188 tcaaaacaccgtgactacgaggaaagatcacattattttgatgctctattagcggctcac 247

                                                                       
Query: 381 tcgcgtgctgagaaagcaaagaagggagttcactctgataaacttcctcctgtgatgcat 440
           || |||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||
Sbjct: 248 tcacgtgctgagaaagcaaagaaaggaattcactctgacaaacttcctcctgtgatgcat 307

                                                                       
Query: 441 ataactgatttaacaatggttaattctaagaaggccaaagatttccttcccttcctacag 500
           ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 308 ataaccgatttaacaatggttaattctaagaaggccaaagatttccttcccttcctgcag 367

                                                                       
Query: 501 cggaatagaaggcatactgccattgttgaatatgttttcagtggtcatcgtttcaaacta 560
           ||||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 368 cggaatagaaggcatactgctgttgttgaatatgtgttcagcggtcatcgtttcaaactg 427

                                                 
Query: 561 acaattccgaaggagacttgcatcatcgccttttcatt 598
           |||||||| ||||||||||||| |||||| ||||||||
Sbjct: 428 acaattccaaaggagacttgcagcatcgctttttcatt 465
to top
>gb|AY104393.1| Zea mays PCO063492 mRNA sequence
          Length = 867

 Score =  301 bits (152), Expect = 1e-78
 Identities = 347/412 (84%)
 Strand = Plus / Plus

                                                                       
Query: 171 gctgatactagagttttggattatggttcagtttttctaggttcgccatcgcaggccgat 230
           |||||||| ||||| || |||||||||||||||||||| ||||| ||||| ||| | |||
Sbjct: 244 gctgatacaagagtattagattatggttcagtttttctgggttcaccatcacagactgat 303

                                                                       
Query: 231 ggtgatgacacatcttctgttccgagcacaggcacccagcctaaaattaatgttgctgag 290
           || ||||||| |||||||| ||||||| | | || |||||||  | ||||||||||||| 
Sbjct: 304 ggagatgacatatcttctgctccgagctctgccagccagcctggagttaatgttgctgaa 363

                                                                       
Query: 291 cttttgctctcacggggctttgctgcgatatcaaaacaccgtgactatgaggaaagatca 350
           ||||| |||||||| |||||||||   | ||| |||||| | || ||||||||||| || 
Sbjct: 364 cttttactctcacgaggctttgctaaaacatctaaacacagggattatgaggaaaggtcg 423

                                                                       
Query: 351 cattattttgatgctctattagcagcgcactcgcgtgctgagaaagcaaagaagggagtt 410
           || |||| ||||||||||||||||||  | || || ||||||||||||||||| ||||| 
Sbjct: 424 cactattatgatgctctattagcagctgaatcacgggctgagaaagcaaagaaaggagtg 483

                                                                       
Query: 411 cactctgataaacttcctcctgtgatgcatataactgatttaacaatggttaattctaag 470
           || ||| | |||    ||||||||||||||||||| ||||||||||  ||   | | |||
Sbjct: 484 cattctcaaaaagaatctcctgtgatgcatataacagatttaacaactgtatctgcaaag 543

                                                                       
Query: 471 aaggccaaagatttccttcccttcctacagcggaatagaaggcatactgccattgttgaa 530
           |||||||||||||||||||||||| | ||| |||| ||||||||| ||||| ||||||||
Sbjct: 544 aaggccaaagatttccttcccttcttgcagaggaacagaaggcattctgccgttgttgaa 603

                                                               
Query: 531 tatgttttcagtggtcatcgtttcaaactaacaattccgaaggagacttgca 582
           |||||||| ||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 604 tatgtttttagtggccatcggttcaaactaacaattcctaaggagacttgca 655



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                       
Query: 33  aagcctgaaaattttgctcgtgaatcgaaggaattcttgcgcacacggttgattggcaaa 92
           ||||||||  |||||||||||||| | ||||| ||||||||||   ||||||||||||| 
Sbjct: 106 aagcctgaccattttgctcgtgaagctaaggagttcttgcgcatgaggttgattggcaag 165

                                                                  
Query: 93  caggtgaccgtggaaatggaatattctagaaggatcagcaccatggatggacaga 147
           || ||| | || ||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 166 caagtggctgttgaaatggaatattctcgaaggatcagcaccgtggatggacaga 220
to top
>gb|BT016256.1| Zea mays clone Contig89 mRNA sequence
          Length = 1657

 Score =  188 bits (95), Expect = 1e-44
 Identities = 221/263 (84%)
 Strand = Plus / Plus

                                                                       
Query: 336 tatgaggaaagatcacattattttgatgctctattagcagcgcactcgcgtgctgagaaa 395
           ||||||||||| ||||| |||| ||||||| ||||||||||  | || || |||||||||
Sbjct: 10  tatgaggaaaggtcacactattatgatgctttattagcagctgaatcacgcgctgagaaa 69

                                                                       
Query: 396 gcaaagaagggagttcactctgataaacttcctcctgtgatgcatataactgatttaaca 455
           |||||||| || || || ||| | |||    ||||||||||||||||||| |||||||||
Sbjct: 70  gcaaagaaaggcgtgcattctcagaaagaatctcctgtgatgcatataacagatttaaca 129

                                                                       
Query: 456 atggttaattctaagaaggccaaagatttccttcccttcctacagcggaatagaaggcat 515
           |  ||   | | ||||||||||||||||| ||||||||| | |||||||| |||||||||
Sbjct: 130 actgtatctgcaaagaaggccaaagattttcttcccttcttgcagcggaacagaaggcat 189

                                                                       
Query: 516 actgccattgttgaatatgttttcagtggtcatcgtttcaaactaacaattccgaaggag 575
            | ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| ||||||
Sbjct: 190 tcggccatcgttgaatatgtttttagtggccatcggttcaaactaacaattcccaaggag 249

                                  
Query: 576 acttgcatcatcgccttttcatt 598
           ||||| |  |||||||| |||||
Sbjct: 250 acttgtagtatcgccttctcatt 272
to top
>ref|XM_466019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3549

 Score =  155 bits (78), Expect = 2e-34
 Identities = 327/410 (79%)
 Strand = Plus / Plus

                                                                        
Query: 183  gttttggattatggttcagtttttctaggttcgccatcgcaggccgatggtgatgacaca 242
            |||||||||||||| || |||||||| ||||| || |||||||| |||||||||||    
Sbjct: 1650 gttttggattatgggtcggtttttcttggttcaccttcgcaggctgatggtgatgatgtt 1709

                                                                        
Query: 243  tcttctgttccgagcacaggcacccagcctaaaattaatgttgctgagcttttgctctca 302
            |||||  |||| ||| |||||| ||| |||   || ||| ||||||||  | ||||||||
Sbjct: 1710 tcttccattccaagctcaggcaaccaacctggtatcaatattgctgagactctgctctca 1769

                                                                        
Query: 303  cggggctttgctgcgatatcaaaacaccgtgactatgaggaaagatcacattattttgat 362
             |||||||||||   | ||| ||||| || ||||| || ||||| ||||| |||||||| 
Sbjct: 1770 aggggctttgctagaacatctaaacatcgggactacgaagaaaggtcacactattttgac 1829

                                                                        
Query: 363  gctctattagcagcgcactcgcgtgctgagaaagcaaagaagggagttcactctgataaa 422
               || || || ||  | || || ||||||||||||||||| |||||||| ||||  |||
Sbjct: 1830 ctgctgttggcggctgaatcacgagctgagaaagcaaagaaaggagttcattctgcaaaa 1889

                                                                        
Query: 423  cttcctcctgtgatgcatataactgatttaacaatggttaattctaagaaggccaaagat 482
                | ||||| ||||| ||||| || || |||| ||||    | |||||||||| ||| 
Sbjct: 1890 gaatcacctgtcatgcacataacagacttgacaacggtttcagcaaagaaggccagagac 1949

                                                                        
Query: 483  ttccttcccttcctacagcggaatagaaggcatactgccattgttgaatatgttttcagt 542
            |||||||| ||| |||||||||| ||||| ||| | || |||||||||||||| ||||||
Sbjct: 1950 ttccttcctttcttacagcggaacagaagacattccgcaattgttgaatatgtcttcagt 2009

                                                              
Query: 543  ggtcatcgtttcaaactaacaattccgaaggagacttgcatcatcgcctt 592
            || || |||||||||||||||||||| ||||||||||||| ||| |||||
Sbjct: 2010 ggccaccgtttcaaactaacaattcctaaggagacttgcagcattgcctt 2059



 Score =  131 bits (66), Expect = 3e-27
 Identities = 102/114 (89%)
 Strand = Plus / Plus

                                                                        
Query: 33   aagcctgaaaattttgctcgtgaatcgaaggaattcttgcgcacacggttgattggcaaa 92
            |||||||| ||||||||||||||| | |||||||||||||||||| ||||||||||||| 
Sbjct: 1509 aagcctgataattttgctcgtgaagccaaggaattcttgcgcacaaggttgattggcaag 1568

                                                                  
Query: 93   caggtgaccgtggaaatggaatattctagaaggatcagcaccatggatggacag 146
            || ||||| || || |||||||| |||||||||||||||||  |||||||||||
Sbjct: 1569 caagtgactgttgagatggaatactctagaaggatcagcactgtggatggacag 1622
to top
>dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J15, full
            insert sequence
          Length = 3547

 Score =  155 bits (78), Expect = 2e-34
 Identities = 327/410 (79%)
 Strand = Plus / Plus

                                                                        
Query: 183  gttttggattatggttcagtttttctaggttcgccatcgcaggccgatggtgatgacaca 242
            |||||||||||||| || |||||||| ||||| || |||||||| |||||||||||    
Sbjct: 1648 gttttggattatgggtcggtttttcttggttcaccttcgcaggctgatggtgatgatgtt 1707

                                                                        
Query: 243  tcttctgttccgagcacaggcacccagcctaaaattaatgttgctgagcttttgctctca 302
            |||||  |||| ||| |||||| ||| |||   || ||| ||||||||  | ||||||||
Sbjct: 1708 tcttccattccaagctcaggcaaccaacctggtatcaatattgctgagactctgctctca 1767

                                                                        
Query: 303  cggggctttgctgcgatatcaaaacaccgtgactatgaggaaagatcacattattttgat 362
             |||||||||||   | ||| ||||| || ||||| || ||||| ||||| |||||||| 
Sbjct: 1768 aggggctttgctagaacatctaaacatcgggactacgaagaaaggtcacactattttgac 1827

                                                                        
Query: 363  gctctattagcagcgcactcgcgtgctgagaaagcaaagaagggagttcactctgataaa 422
               || || || ||  | || || ||||||||||||||||| |||||||| ||||  |||
Sbjct: 1828 ctgctgttggcggctgaatcacgagctgagaaagcaaagaaaggagttcattctgcaaaa 1887

                                                                        
Query: 423  cttcctcctgtgatgcatataactgatttaacaatggttaattctaagaaggccaaagat 482
                | ||||| ||||| ||||| || || |||| ||||    | |||||||||| ||| 
Sbjct: 1888 gaatcacctgtcatgcacataacagacttgacaacggtttcagcaaagaaggccagagac 1947

                                                                        
Query: 483  ttccttcccttcctacagcggaatagaaggcatactgccattgttgaatatgttttcagt 542
            |||||||| ||| |||||||||| ||||| ||| | || |||||||||||||| ||||||
Sbjct: 1948 ttccttcctttcttacagcggaacagaagacattccgcaattgttgaatatgtcttcagt 2007

                                                              
Query: 543  ggtcatcgtttcaaactaacaattccgaaggagacttgcatcatcgcctt 592
            || || |||||||||||||||||||| ||||||||||||| ||| |||||
Sbjct: 2008 ggccaccgtttcaaactaacaattcctaaggagacttgcagcattgcctt 2057



 Score =  131 bits (66), Expect = 3e-27
 Identities = 102/114 (89%)
 Strand = Plus / Plus

                                                                        
Query: 33   aagcctgaaaattttgctcgtgaatcgaaggaattcttgcgcacacggttgattggcaaa 92
            |||||||| ||||||||||||||| | |||||||||||||||||| ||||||||||||| 
Sbjct: 1507 aagcctgataattttgctcgtgaagccaaggaattcttgcgcacaaggttgattggcaag 1566

                                                                  
Query: 93   caggtgaccgtggaaatggaatattctagaaggatcagcaccatggatggacag 146
            || ||||| || || |||||||| |||||||||||||||||  |||||||||||
Sbjct: 1567 caagtgactgttgagatggaatactctagaaggatcagcactgtggatggacag 1620
to top
>gb|AY320036.1| Oryza sativa (japonica cultivar-group) RNA binding protein Rp120
            mRNA, complete cds
          Length = 2961

 Score =  131 bits (66), Expect = 3e-27
 Identities = 171/206 (83%)
 Strand = Plus / Plus

                                                                        
Query: 387  gctgagaaagcaaagaagggagttcactctgataaacttcctcctgtgatgcatataact 446
            ||||||||||||||||| |||||||| ||||  |||    | ||||| ||||| ||||| 
Sbjct: 1633 gctgagaaagcaaagaaaggagttcattctgcaaaaaaatcacctgtcatgcacataaca 1692

                                                                        
Query: 447  gatttaacaatggttaattctaagaaggccaaagatttccttcccttcctacagcggaat 506
            || || |||| ||||    | |||||||||| ||| |||||||| ||| |||||||||| 
Sbjct: 1693 gacttgacaacggtttcagcaaagaaggccagagacttccttcctttcttacagcggaac 1752

                                                                        
Query: 507  agaaggcatactgccattgttgaatatgttttcagtggtcatcgtttcaaactaacaatt 566
            ||||| ||| | || |||||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 1753 agaagacattccgcaattgttgaatatgtcttcagtggccaccgtttcaaactaacaatt 1812

                                      
Query: 567  ccgaaggagacttgcatcatcgcctt 592
            || ||||||||||||| ||| |||||
Sbjct: 1813 cctaaggagacttgcagcattgcctt 1838



 Score =  131 bits (66), Expect = 3e-27
 Identities = 102/114 (89%)
 Strand = Plus / Plus

                                                                        
Query: 33   aagcctgaaaattttgctcgtgaatcgaaggaattcttgcgcacacggttgattggcaaa 92
            |||||||| ||||||||||||||| | |||||||||||||||||| ||||||||||||| 
Sbjct: 1288 aagcctgataattttgctcgtgaagccaaggaattcttgcgcacaaggttgattggcaag 1347

                                                                  
Query: 93   caggtgaccgtggaaatggaatattctagaaggatcagcaccatggatggacag 146
            || ||||| || || |||||||| |||||||||||||||||  |||||||||||
Sbjct: 1348 caagtgactgttgagatggaatactctagaaggatcagcactgtggatggacag 1401



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                    
Query: 183  gttttggattatggttcagtttttctaggttcgccatcgcaggccgatggtgatga 238
            |||||||||||||| || |||||||| ||||| || |||||||| |||||||||||
Sbjct: 1429 gttttggattatgggtcggtttttcttggttcaccttcgcaggctgatggtgatga 1484
to top
>gb|AY320037.1| Oryza sativa (japonica cultivar-group) RNA binding protein Rp120
            gene, complete cds
          Length = 5478

 Score =  129 bits (65), Expect = 1e-26
 Identities = 110/125 (88%)
 Strand = Plus / Plus

                                                                        
Query: 468  aagaaggccaaagatttccttcccttcctacagcggaatagaaggcatactgccattgtt 527
            |||||||||| ||| |||||||| ||| |||||||||| ||||| ||| | || ||||||
Sbjct: 2882 aagaaggccagagacttccttcctttcttacagcggaacagaagacattccgcaattgtt 2941

                                                                        
Query: 528  gaatatgttttcagtggtcatcgtttcaaactaacaattccgaaggagacttgcatcatc 587
            |||||||| |||||||| || |||||||||||||||||||| ||||||||||||| ||| 
Sbjct: 2942 gaatatgtcttcagtggccaccgtttcaaactaacaattcctaaggagacttgcagcatt 3001

                 
Query: 588  gcctt 592
            |||||
Sbjct: 3002 gcctt 3006



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                       
Query: 33   aagcctgaaaattttgctcgtgaatcgaaggaattcttgcgcacacggttgattggcaa 91
            |||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||
Sbjct: 2281 aagcctgataattttgctcgtgaagccaaggaattcttgcgcacaaggttgattggcaa 2339



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                    
Query: 183  gttttggattatggttcagtttttctaggttcgccatcgcaggccgatggtgatga 238
            |||||||||||||| || |||||||| ||||| || |||||||| |||||||||||
Sbjct: 2519 gttttggattatgggtcggtttttcttggttcaccttcgcaggctgatggtgatga 2574



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 93   caggtgaccgtggaaatggaatattctagaaggatcagcaccatggatggacag 146
            |||||||| || || |||||||| |||||||||||||||||  |||||||||||
Sbjct: 2438 caggtgactgttgagatggaatactctagaaggatcagcactgtggatggacag 2491



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 387  gctgagaaagcaaagaagggagttcactctg 417
            ||||||||||||||||| |||||||| ||||
Sbjct: 2723 gctgagaaagcaaagaaaggagttcattctg 2753
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  129 bits (65), Expect = 1e-26
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                            
Query: 468      aagaaggccaaagatttccttcccttcctacagcggaatagaaggcatactgccattgtt 527
                |||||||||| ||| |||||||| ||| |||||||||| ||||| ||| | || ||||||
Sbjct: 19121049 aagaaggccagagacttccttcctttcttacagcggaacagaagacattccgcaattgtt 19120990

                                                                            
Query: 528      gaatatgttttcagtggtcatcgtttcaaactaacaattccgaaggagacttgcatcatc 587
                |||||||| |||||||| || |||||||||||||||||||| ||||||||||||| ||| 
Sbjct: 19120989 gaatatgtcttcagtggccaccgtttcaaactaacaattcctaaggagacttgcagcatt 19120930

                     
Query: 588      gcctt 592
                |||||
Sbjct: 19120929 gcctt 19120925



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                           
Query: 33       aagcctgaaaattttgctcgtgaatcgaaggaattcttgcgcacacggttgattggcaa 91
                |||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||
Sbjct: 19121650 aagcctgataattttgctcgtgaagccaaggaattcttgcgcacaaggttgattggcaa 19121592



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 185/235 (78%)
 Strand = Plus / Minus

                                                                            
Query: 183      gttttggattatggttcagtttttctaggttcgccatcgcaggccgatggtgatgacaca 242
                |||||||||||||| || |||||||| ||||| || |||||||| |||||||||||    
Sbjct: 19121412 gttttggattatgggtcggtttttcttggttcaccttcgcaggctgatggtgatgatgtt 19121353

                                                                            
Query: 243      tcttctgttccgagcacaggcacccagcctaaaattaatgttgctgagcttttgctctca 302
                |||||  |||| ||| |||||| ||| |||   || ||| ||||||||  | ||||||||
Sbjct: 19121352 tcttccattccaagctcaggcaaccaacctggtatcaatattgctgagactctgctctca 19121293

                                                                            
Query: 303      cggggctttgctgcgatatcaaaacaccgtgactatgaggaaagatcacattattttgat 362
                 |||||||||||   | ||| ||||| || ||||| || ||||| ||||| |||||||| 
Sbjct: 19121292 aggggctttgctagaacatctaaacatcgggactacgaagaaaggtcacactattttgac 19121233

                                                                       
Query: 363      gctctattagcagcgcactcgcgtgctgagaaagcaaagaagggagttcactctg 417
                   || || || ||  | || || ||||||||||||||||| |||||||| ||||
Sbjct: 19121232 ctgctgttggcggctgaatcacgagctgagaaagcaaagaaaggagttcattctg 19121178



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                      
Query: 93       caggtgaccgtggaaatggaatattctagaaggatcagcaccatggatggacag 146
                |||||||| || || |||||||| |||||||||||||||||  |||||||||||
Sbjct: 19121493 caggtgactgttgagatggaatactctagaaggatcagcactgtggatggacag 19121440
to top
>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0415B12
          Length = 157419

 Score =  129 bits (65), Expect = 1e-26
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                         
Query: 468   aagaaggccaaagatttccttcccttcctacagcggaatagaaggcatactgccattgtt 527
             |||||||||| ||| |||||||| ||| |||||||||| ||||| ||| | || ||||||
Sbjct: 19298 aagaaggccagagacttccttcctttcttacagcggaacagaagacattccgcaattgtt 19239

                                                                         
Query: 528   gaatatgttttcagtggtcatcgtttcaaactaacaattccgaaggagacttgcatcatc 587
             |||||||| |||||||| || |||||||||||||||||||| ||||||||||||| ||| 
Sbjct: 19238 gaatatgtcttcagtggccaccgtttcaaactaacaattcctaaggagacttgcagcatt 19179

                  
Query: 588   gcctt 592
             |||||
Sbjct: 19178 gcctt 19174



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                        
Query: 33    aagcctgaaaattttgctcgtgaatcgaaggaattcttgcgcacacggttgattggcaa 91
             |||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||
Sbjct: 19899 aagcctgataattttgctcgtgaagccaaggaattcttgcgcacaaggttgattggcaa 19841



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 185/235 (78%)
 Strand = Plus / Minus

                                                                         
Query: 183   gttttggattatggttcagtttttctaggttcgccatcgcaggccgatggtgatgacaca 242
             |||||||||||||| || |||||||| ||||| || |||||||| |||||||||||    
Sbjct: 19661 gttttggattatgggtcggtttttcttggttcaccttcgcaggctgatggtgatgatgtt 19602

                                                                         
Query: 243   tcttctgttccgagcacaggcacccagcctaaaattaatgttgctgagcttttgctctca 302
             |||||  |||| ||| |||||| ||| |||   || ||| ||||||||  | ||||||||
Sbjct: 19601 tcttccattccaagctcaggcaaccaacctggtatcaatattgctgagactctgctctca 19542

                                                                         
Query: 303   cggggctttgctgcgatatcaaaacaccgtgactatgaggaaagatcacattattttgat 362
              |||||||||||   | ||| ||||| || ||||| || ||||| ||||| |||||||| 
Sbjct: 19541 aggggctttgctagaacatctaaacatcgggactacgaagaaaggtcacactattttgac 19482

                                                                    
Query: 363   gctctattagcagcgcactcgcgtgctgagaaagcaaagaagggagttcactctg 417
                || || || ||  | || || ||||||||||||||||| |||||||| ||||
Sbjct: 19481 ctgctgttggcggctgaatcacgagctgagaaagcaaagaaaggagttcattctg 19427



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 93    caggtgaccgtggaaatggaatattctagaaggatcagcaccatggatggacag 146
             |||||||| || || |||||||| |||||||||||||||||  |||||||||||
Sbjct: 19742 caggtgactgttgagatggaatactctagaaggatcagcactgtggatggacag 19689
to top
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0047A17
          Length = 149142

 Score =  129 bits (65), Expect = 1e-26
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                          
Query: 468    aagaaggccaaagatttccttcccttcctacagcggaatagaaggcatactgccattgtt 527
              |||||||||| ||| |||||||| ||| |||||||||| ||||| ||| | || ||||||
Sbjct: 126570 aagaaggccagagacttccttcctttcttacagcggaacagaagacattccgcaattgtt 126511

                                                                          
Query: 528    gaatatgttttcagtggtcatcgtttcaaactaacaattccgaaggagacttgcatcatc 587
              |||||||| |||||||| || |||||||||||||||||||| ||||||||||||| ||| 
Sbjct: 126510 gaatatgtcttcagtggccaccgtttcaaactaacaattcctaaggagacttgcagcatt 126451

                   
Query: 588    gcctt 592
              |||||
Sbjct: 126450 gcctt 126446



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                         
Query: 33     aagcctgaaaattttgctcgtgaatcgaaggaattcttgcgcacacggttgattggcaa 91
              |||||||| ||||||||||||||| | |||||||||||||||||| |||||||||||||
Sbjct: 127171 aagcctgataattttgctcgtgaagccaaggaattcttgcgcacaaggttgattggcaa 127113



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 185/235 (78%)
 Strand = Plus / Minus

                                                                          
Query: 183    gttttggattatggttcagtttttctaggttcgccatcgcaggccgatggtgatgacaca 242
              |||||||||||||| || |||||||| ||||| || |||||||| |||||||||||    
Sbjct: 126933 gttttggattatgggtcggtttttcttggttcaccttcgcaggctgatggtgatgatgtt 126874

                                                                          
Query: 243    tcttctgttccgagcacaggcacccagcctaaaattaatgttgctgagcttttgctctca 302
              |||||  |||| ||| |||||| ||| |||   || ||| ||||||||  | ||||||||
Sbjct: 126873 tcttccattccaagctcaggcaaccaacctggtatcaatattgctgagactctgctctca 126814

                                                                          
Query: 303    cggggctttgctgcgatatcaaaacaccgtgactatgaggaaagatcacattattttgat 362
               |||||||||||   | ||| ||||| || ||||| || ||||| ||||| |||||||| 
Sbjct: 126813 aggggctttgctagaacatctaaacatcgggactacgaagaaaggtcacactattttgac 126754

                                                                     
Query: 363    gctctattagcagcgcactcgcgtgctgagaaagcaaagaagggagttcactctg 417
                 || || || ||  | || || ||||||||||||||||| |||||||| ||||
Sbjct: 126753 ctgctgttggcggctgaatcacgagctgagaaagcaaagaaaggagttcattctg 126699



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 93     caggtgaccgtggaaatggaatattctagaaggatcagcaccatggatggacag 146
              |||||||| || || |||||||| |||||||||||||||||  |||||||||||
Sbjct: 127014 caggtgactgttgagatggaatactctagaaggatcagcactgtggatggacag 126961
to top
>dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D08, full
           insert sequence
          Length = 1551

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                       
Query: 522 attgttgaatatgttttcagtggtcatcgtttcaaactaacaattccgaaggagacttgc 581
           |||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 5   attgttgaatatgtcttcagtggccaccgtttcaaactaacaattcctaaggagacttgc 64

                      
Query: 582 atcatcgcctt 592
           | ||| |||||
Sbjct: 65  agcattgcctt 75
to top
>gb|AC139708.15| Medicago truncatula clone mth2-9f16, complete sequence
          Length = 117358

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 528   gaatatgttttcagtggtcatcgtttcaaa 557
             |||||||| ||||||||||| |||||||||
Sbjct: 99831 gaatatgtcttcagtggtcaccgtttcaaa 99802



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 425    tcctcctgtgatgcatataactga 448
              |||||| |||||||||||||||||
Sbjct: 100032 tcctccagtgatgcatataactga 100009
to top
>emb|BX005103.4| Zebrafish DNA sequence from clone CH211-149O7 in linkage group 25,
             complete sequence
          Length = 150295

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 179   tagagttttggattatggttcagttt 204
             |||||||||||||||| |||||||||
Sbjct: 89998 tagagttttggattattgttcagttt 89973
to top
>emb|AL929136.5| Mouse DNA sequence from clone RP23-442B16 on chromosome 2, complete
             sequence
          Length = 112788

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 155   gcctgcagtgagctcggctgatacta 180
             |||||||||||||| |||||||||||
Sbjct: 59580 gcctgcagtgagctgggctgatacta 59555
to top
>ref|XM_472372.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3171

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                        
Query: 522  attgttgaatatgttttcagtggtcatcgtttcaaactaacaattccgaaggagacttgc 581
            |||||||| || |||||||| || |||||||||||| | || || || || |||||||||
Sbjct: 1786 attgttgagtacgttttcagcggccatcgtttcaaagtgacgatccctaaagagacttgc 1845

             
Query: 582  a 582
            |
Sbjct: 1846 a 1846
to top
>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08,
             complete sequence
          Length = 106975

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                         
Query: 522   attgttgaatatgttttcagtggtcatcgtttcaaactaacaattccgaaggagacttgc 581
             |||||||| || |||||||| || |||||||||||| | || || || || |||||||||
Sbjct: 87737 attgttgagtacgttttcagcggccatcgtttcaaagtgacgatccctaaagagacttgc 87678

              
Query: 582   a 582
             |
Sbjct: 87677 a 87677
to top
>gb|AC087455.7| Homo sapiens, clone RP11-143J24, complete sequence
          Length = 185644

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 296   gctctcacggggctttgctgc 316
             |||||||||||||||||||||
Sbjct: 94879 gctctcacggggctttgctgc 94899
to top
>gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, complete sequence
          Length = 193681

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 296    gctctcacggggctttgctgc 316
              |||||||||||||||||||||
Sbjct: 170401 gctctcacggggctttgctgc 170421
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                            
Query: 522      attgttgaatatgttttcagtggtcatcgtttcaaactaacaattccgaaggagacttgc 581
                |||||||| || |||||||| || |||||||||||| | || || || || |||||||||
Sbjct: 19932929 attgttgagtacgttttcagcggccatcgtttcaaagtgacgatccctaaagagacttgc 19932870

                 
Query: 582      a 582
                |
Sbjct: 19932869 a 19932869
to top
>gb|AC090963.32| Mus musculus strain C57BL/6J chromosome 17 clone rp23-435j12, complete
              sequence
          Length = 218107

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 143    acagaatgctatgcctgcagt 163
              |||||||||||||||||||||
Sbjct: 129842 acagaatgctatgcctgcagt 129822
to top
>gb|AC090653.36| Mus musculus strain C57BL/6J chromosome 17 clone rp23-260k1, complete
              sequence
          Length = 191844

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 143    acagaatgctatgcctgcagt 163
              |||||||||||||||||||||
Sbjct: 152800 acagaatgctatgcctgcagt 152820
to top
>emb|BX005386.8| Zebrafish DNA sequence from clone DKEY-21M1 in linkage group 1,
             complete sequence
          Length = 170040

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 336   tatgaggaaagatcacattat 356
             |||||||||||||||||||||
Sbjct: 35229 tatgaggaaagatcacattat 35209
to top
>dbj|AP004932.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT10J03, TM0094a,
             complete sequence
          Length = 65557

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                         
Query: 468   aagaaggccaaagatttccttcccttcctacagcggaatagaaggcatactgccattgtt 527
             ||||| |||||||| ||| | || |||||||| || | |||||||  | ||||  |||| 
Sbjct: 50942 aagaaagccaaagacttcttgcctttcctacatcgaagtagaagggttcctgctgttgtg 50883

                                          
Query: 528   gaatatgttttcagtggtcatcgtttcaa 556
             ||||||||  ||||||| |||||||||||
Sbjct: 50882 gaatatgtcctcagtggccatcgtttcaa 50854



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                         
Query: 468   aagaaggccaaagatttccttcccttcctacagcggaatagaaggcatactgccattgtt 527
             ||||| |||||||| ||| | || |||||||| || | |||||||  | ||||  |||| 
Sbjct: 34927 aagaaagccaaagacttcttgcctttcctacatcgaagtagaaggattcctgctgttgtg 34868

                                          
Query: 528   gaatatgttttcagtggtcatcgtttcaa 556
             ||||||||  ||||||| |||||||||||
Sbjct: 34867 gaatatgtcctcagtggccatcgtttcaa 34839



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                         
Query: 468   aagaaggccaaagatttccttcccttcctacagcggaatagaaggcatactgccattgtt 527
             ||||| |||||||| ||| | || |||||||| || | |||||||  | ||||  |||| 
Sbjct: 22017 aagaaagccaaagacttcttgcctttcctacaacgaagtagaagggttcctgctgttgtg 21958

                                          
Query: 528   gaatatgttttcagtggtcatcgtttcaa 556
             ||||||||  ||||||| |||||||||||
Sbjct: 21957 gaatatgtcctcagtggccatcgtttcaa 21929



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 425   tcctcctgtgatgcatataactga 448
             |||||| |||||||||||||||||
Sbjct: 51077 tcctccagtgatgcatataactga 51054



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 425   tcctcctgtgatgcatataactga 448
             |||||| |||||||||||||||||
Sbjct: 35062 tcctccagtgatgcatataactga 35039



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 425   tcctcctgtgatgcatataactga 448
             |||||| |||||||||||||||||
Sbjct: 22152 tcctccagtgatgcatataactga 22129
to top
>ref|NM_111707.2| Arabidopsis thaliana ATPK1; kinase AT3G08730 (ATPK1) mRNA, complete
           cds
          Length = 1835

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 337 atgaggaaagatcacattat 356
           ||||||||||||||||||||
Sbjct: 796 atgaggaaagatcacattat 815
to top
>gb|AC008317.7| Drosophila melanogaster clone BACR08N17, complete sequence
          Length = 169100

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 525   gttgaatatgttttcagtgg 544
             ||||||||||||||||||||
Sbjct: 10831 gttgaatatgttttcagtgg 10850
to top
>gb|AC008356.6| Drosophila melanogaster clone BACR43K14, complete sequence
          Length = 162593

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 525   gttgaatatgttttcagtgg 544
             ||||||||||||||||||||
Sbjct: 82856 gttgaatatgttttcagtgg 82875
to top
>gb|AC079405.4| Homo sapiens BAC clone RP11-1150H5 from 7, complete sequence
          Length = 58815

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   gtgctgagaaagcaaagaag 404
             ||||||||||||||||||||
Sbjct: 17476 gtgctgagaaagcaaagaag 17495
to top
>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence
          Length = 219004

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   aaatggaatattctagaaggatca 129
             |||||||| |||||||||||||||
Sbjct: 11839 aaatggaaaattctagaaggatca 11816
to top
>gb|AC145983.2| Pan troglodytes BAC clone RP43-17E6 from 7, complete sequence
          Length = 167523

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   gtgctgagaaagcaaagaag 404
             ||||||||||||||||||||
Sbjct: 90222 gtgctgagaaagcaaagaag 90203
to top
>gb|L29030.1|ATHATPSAAA Arabidopsis thaliana protein-serine kinase mRNA, complete cds
          Length = 1747

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 337 atgaggaaagatcacattat 356
           ||||||||||||||||||||
Sbjct: 749 atgaggaaagatcacattat 768
to top
>emb|CR769786.9| Zebrafish DNA sequence from clone DKEY-256I5 in linkage group 3,
             complete sequence
          Length = 91701

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 347   atcacattattttgatgctctatt 370
             ||||||||||||||||| ||||||
Sbjct: 75796 atcacattattttgatgatctatt 75773
to top
>emb|AL590426.6| Human DNA sequence from clone RP11-354K4 on chromosome 6 Contains novel
              pseudogene, complete sequence
          Length = 204235

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 407    agttcactctgataaacttc 426
              ||||||||||||||||||||
Sbjct: 180617 agttcactctgataaacttc 180598
to top
>emb|AL513523.33| Human DNA sequence from clone RP11-216N14 on chromosome 1 Contains a
             survival of motor neuron protein interacting protein 1
             pseudogene (SIP1), a novel gene (FLJ21919), two novel
             genes, a novel gene, the SLC27A3 gene for solute carrier
             family 27 (fatty acid transporter), member 3, a pseudogene
             similar to part of putative neuronal cell adhesion
             molecule (PUNC), the 3' end of the gene for transcription
             repressor p66 beta component of the MeCP1 complex
             (P66beta), a adipose differentiation-related protein
             (ADFP) pseudogene and a CpG island, complete sequence
          Length = 150166

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   cccagcctaaaattaatgtt 284
             ||||||||||||||||||||
Sbjct: 36186 cccagcctaaaattaatgtt 36205
to top
>gb|BT009970.1| Drosophila melanogaster RE63138 full insert cDNA
          Length = 5869

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 525  gttgaatatgttttcagtgg 544
            ||||||||||||||||||||
Sbjct: 2258 gttgaatatgttttcagtgg 2277
to top
>emb|AL354830.8| Human DNA sequence from clone RP11-193G17 on chromosome 13 Contains the
              gene for a novel protein similar to prothymosin, complete
              sequence
          Length = 152555

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    tgaggaaagatcacattatt 357
              ||||||||||||||||||||
Sbjct: 128913 tgaggaaagatcacattatt 128932
to top
>emb|AL135934.19| Human DNA sequence from clone RP5-945I17 on chromosome 11p12-13,
             complete sequence
          Length = 93708

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   atttaacaatggttaattct 467
             ||||||||||||||||||||
Sbjct: 87717 atttaacaatggttaattct 87736
to top
>emb|CR788312.9| Zebrafish DNA sequence from clone DKEY-192D9, complete sequence
          Length = 177966

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 439    atataactgatttaacaatggtta 462
              ||||||||||| ||||||||||||
Sbjct: 123967 atataactgatgtaacaatggtta 123990
to top
>gb|AY096555.1| Arabidopsis thaliana putative ribosomal protein S6 kinase (ATPK6)
           (At3g08730) mRNA, complete cds
          Length = 1429

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 337 atgaggaaagatcacattat 356
           ||||||||||||||||||||
Sbjct: 493 atgaggaaagatcacattat 512
to top
>gb|AY065230.1| Arabidopsis thaliana putative ribosomal-protein S6 kinase ATPK6
           (At3g08730) mRNA, complete cds
          Length = 1781

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 337 atgaggaaagatcacattat 356
           ||||||||||||||||||||
Sbjct: 747 atgaggaaagatcacattat 766
to top
>emb|X62589.1|DMPUMI D.melanogaster mRNA for pumilio protein
          Length = 6120

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 525  gttgaatatgttttcagtgg 544
            ||||||||||||||||||||
Sbjct: 1711 gttgaatatgttttcagtgg 1730
to top
>ref|NM_169260.1| Drosophila melanogaster pumilio CG9755-RB, transcript variant B
           (pum), mRNA
          Length = 4928

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 525 gttgaatatgttttcagtgg 544
           ||||||||||||||||||||
Sbjct: 521 gttgaatatgttttcagtgg 540
to top
>ref|NM_169259.1| Drosophila melanogaster pumilio CG9755-RD, transcript variant D
            (pum), mRNA
          Length = 6643

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 525  gttgaatatgttttcagtgg 544
            ||||||||||||||||||||
Sbjct: 2236 gttgaatatgttttcagtgg 2255
to top
>ref|NM_169258.1| Drosophila melanogaster pumilio CG9755-RA, transcript variant A
            (pum), mRNA
          Length = 6665

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 525  gttgaatatgttttcagtgg 544
            ||||||||||||||||||||
Sbjct: 2258 gttgaatatgttttcagtgg 2277
to top
>gb|AC158604.5| Mus musculus 10 BAC RP23-130B2 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190024

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 106  aaatggaatattctagaaggatca 129
            |||||||| |||||||||||||||
Sbjct: 2831 aaatggaaaattctagaaggatca 2854
to top
>gb|L07943.1|DROPUM Drosophila melanogaster pumilio protein (pum) mRNA, complete cds
          Length = 6833

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 525  gttgaatatgttttcagtgg 544
            ||||||||||||||||||||
Sbjct: 2430 gttgaatatgttttcagtgg 2449
to top
>ref|NM_079561.2| Drosophila melanogaster pumilio CG9755-RC, transcript variant C
            (pum), mRNA
          Length = 6809

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 525  gttgaatatgttttcagtgg 544
            ||||||||||||||||||||
Sbjct: 2402 gttgaatatgttttcagtgg 2421
to top
>gb|AC006122.24| Homo sapiens 12 BAC RP11-264F23 (Roswell Park Cancer Institute Human Bac
              Library) complete sequence
          Length = 127957

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    ggaaatggaatattctagaa 123
              ||||||||||||||||||||
Sbjct: 122471 ggaaatggaatattctagaa 122452
to top
>emb|BX823948.1|CNS0A6IK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS9ZE08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1729

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 337 atgaggaaagatcacattat 356
           ||||||||||||||||||||
Sbjct: 722 atgaggaaagatcacattat 741
to top
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete
             sequence
          Length = 90721

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   atgaggaaagatcacattat 356
             ||||||||||||||||||||
Sbjct: 63794 atgaggaaagatcacattat 63775
to top
>gb|AC018733.8| Homo sapiens BAC clone RP11-337H6 from 2, complete sequence
          Length = 163117

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   aaagatcacattattttgat 362
             ||||||||||||||||||||
Sbjct: 25822 aaagatcacattattttgat 25841
to top
>gb|AC091212.17| Homo sapiens 3 BAC CTD-2021J15 (CalTech Clone Library D) complete
             sequence
          Length = 79000

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 542   tggtcatcgtttcaaactaa 561
             ||||||||||||||||||||
Sbjct: 22185 tggtcatcgtttcaaactaa 22204
to top
>gb|AY084935.1| Arabidopsis thaliana clone 122224 mRNA, complete sequence
          Length = 1808

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 337 atgaggaaagatcacattat 356
           ||||||||||||||||||||
Sbjct: 796 atgaggaaagatcacattat 815
to top
>gb|AC145418.5| Dasypus novemcinctus clone VMRC5-458M22, complete sequence
          Length = 117130

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 271   ctaaaattaatgttgctgagcttt 294
             |||| |||||||||||||||||||
Sbjct: 84117 ctaatattaatgttgctgagcttt 84140
to top
>dbj|D42056.1|ATHATPK6A Arabidopsis thaliana ATPK6 mRNA for ribosomal-protein S6 kinase
           homolog, complete cds
          Length = 1786

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 337 atgaggaaagatcacattat 356
           ||||||||||||||||||||
Sbjct: 726 atgaggaaagatcacattat 745
to top
>dbj|AB078603.1| Pisum sativum SN4TDR mRNA for 110 kDa 4SNc-Tudor domain protein,
            complete cds
          Length = 3379

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 425  tcctcctgtgatgcatataactga 448
            |||||| |||||||||||||||||
Sbjct: 1871 tcctccagtgatgcatataactga 1894
to top
>dbj|AB055904.1| Pisum sativum SN4TDR mRNA for 110 kDa 4SNc-Tudor domain protein,
           partial cds
          Length = 2343

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 425 tcctcctgtgatgcatataactga 448
           |||||| |||||||||||||||||
Sbjct: 807 tcctccagtgatgcatataactga 830
to top
>gb|BT021317.1| Drosophila melanogaster RE10602 full insert cDNA
          Length = 6820

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 525  gttgaatatgttttcagtgg 544
            ||||||||||||||||||||
Sbjct: 2402 gttgaatatgttttcagtgg 2421
to top
>gb|AE003681.5| Drosophila melanogaster chromosome 3R, section 19 of 118 of the complete
              sequence
          Length = 306650

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 525    gttgaatatgttttcagtgg 544
              ||||||||||||||||||||
Sbjct: 287041 gttgaatatgttttcagtgg 287022
to top
>gb|AC131795.3| Mus musculus BAC clone RP24-490N11 from 10, complete sequence
          Length = 181961

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   tgttgaatatgttttcagtg 543
             ||||||||||||||||||||
Sbjct: 11459 tgttgaatatgttttcagtg 11440
to top
>gb|AC117209.3| Mus musculus BAC clone RP23-281E24 from 10, complete sequence
          Length = 195911

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 524    tgttgaatatgttttcagtg 543
              ||||||||||||||||||||
Sbjct: 175513 tgttgaatatgttttcagtg 175494


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,001,717
Number of Sequences: 3902068
Number of extensions: 6001717
Number of successful extensions: 117386
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117181
Number of HSP's gapped (non-prelim): 204
length of query: 598
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 575
effective length of database: 17,143,297,704
effective search space: 9857396179800
effective search space used: 9857396179800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top