ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags24h17 |
|---|---|
| Clone Library Name | barley_pub |
>DNMT1_MOUSE (P13864) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)| (DNA methyltransferase MmuI) (DNA MTase MmuI) (MCMT) (M.MmuI) (Met-1) Length = 1620 Score = 80.1 bits (196), Expect = 6e-15 Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 2/85 (2%) Frame = +3 Query: 15 FGRLWWDEVVGTVLTCPNI--HMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRY 188 +GRL WD T +T P ++HP Q R+++VRE AR QGFPDSYRF G + DR+ Sbjct: 1516 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRH 1575 Query: 189 RQIGNAVAVPVGRALGYALAMANLN 263 RQ+GNAV P+ +A+G + + L+ Sbjct: 1576 RQVGNAVPPPLAKAIGLEIKLCLLS 1600
>DNMT1_PARLI (Q27746) DNA (cytosine-5)-methyltransferase PliMCI (EC 2.1.1.37)| (Dnmt1) (DNA methyltransferase PliMCI) (DNA MTase PliMCI) (MCMT) (M.PliMCI) Length = 1612 Score = 78.6 bits (192), Expect = 2e-14 Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 2/88 (2%) Frame = +3 Query: 15 FGRLWWDEVVGTVLTCPNI--HMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRY 188 +GRL WD T +T P ++HP Q R+++VRE AR QGFPD+YRF G++ D++ Sbjct: 1505 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDKH 1564 Query: 189 RQIGNAVAVPVGRALGYALAMANLNKTE 272 RQIGNAV P+ A+G + + KT+ Sbjct: 1565 RQIGNAVPPPMAAAIGMEIKVCLQTKTK 1592
>DNMT1_HUMAN (P26358) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)| (DNA methyltransferase HsaI) (DNA MTase HsaI) (MCMT) (M.HsaI) Length = 1616 Score = 76.6 bits (187), Expect = 6e-14 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%) Frame = +3 Query: 15 FGRLWWDEVVGTVLTCPNI--HMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRY 188 +GRL WD T +T P ++HP Q R+++VRE AR QGFPD+YR G + D++ Sbjct: 1514 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKH 1573 Query: 189 RQIGNAVAVPVGRALGYALAMANLNK 266 RQ+GNAV P+ +A+G + + L K Sbjct: 1574 RQVGNAVPPPLAKAIGLEIKLCMLAK 1599
>DNMT1_RAT (Q9Z330) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)| (DNA methyltransferase I) (DNA MTase RnoIP) (MCMT) (M.RnoIP) Length = 1622 Score = 76.3 bits (186), Expect = 8e-14 Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 2/84 (2%) Frame = +3 Query: 15 FGRLWWDEVVGTVLTCPNI--HMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRY 188 +GRL WD T +T P ++HP Q R+++VRE AR QGFPD+YR G + DR+ Sbjct: 1518 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRH 1577 Query: 189 RQIGNAVAVPVGRALGYALAMANL 260 RQ+GNAV P+ +A+G + + L Sbjct: 1578 RQVGNAVPPPLAKAIGLEIKLCLL 1601
>DNMT1_CHICK (Q92072) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)| (DNA methyltransferase GgaI) (DNA MTase GgaI) (MCMT) (M.GgaI) Length = 1537 Score = 75.9 bits (185), Expect = 1e-13 Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 3/98 (3%) Frame = +3 Query: 15 FGRLWWDEVVGTVLTCPNI--HMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRY 188 +GRL WD T +T P ++HP Q R+++VRE AR QGFPD+YR G + D++ Sbjct: 1428 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKH 1487 Query: 189 RQIGNAVAVPVGRALGYAL-AMANLNKTENYPLMVLPP 299 RQ+GNAV P+ +A+G + A E V PP Sbjct: 1488 RQVGNAVPPPLAKAIGLEIRACVGARMREESGAAVAPP 1525
>DNMT1_ARATH (P34881) DNA (cytosine-5)-methyltransferase AthI (EC 2.1.1.37) (DNA| methyltransferase AthI) (DNA Metase AthI) (M.AthI) Length = 1534 Score = 71.6 bits (174), Expect = 2e-12 Identities = 40/82 (48%), Positives = 48/82 (58%), Gaps = 2/82 (2%) Frame = +3 Query: 15 FGRLWWDEVVGTVLTCPNI--HMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRY 188 +GRL W T +T P + HP Q R+LTVRE AR QGFPDSY F G + ++ Sbjct: 1442 YGRLDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILTVRECARSQGFPDSYEFAGNINHKH 1501 Query: 189 RQIGNAVAVPVGRALGYALAMA 254 RQIGNAV P+ ALG L A Sbjct: 1502 RQIGNAVPPPLAFALGRKLKEA 1523
>MTP1_PSYTA (O33481) Modification methylase PspPI (EC 2.1.1.37)| (Cytosine-specific methyltransferase PspPI) (M.PspPI) Length = 416 Score = 66.6 bits (161), Expect = 7e-11 Identities = 34/75 (45%), Positives = 46/75 (61%) Frame = +3 Query: 21 RLWWDEVVGTVLTCPNIHMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIG 200 RL WDE T++ P HP++ R LT RE AR+Q FPD + F+G+V Y+QIG Sbjct: 329 RLSWDEPSLTLVCTPAQKQTERCHPSESRPLTTREYARIQTFPDDWEFKGSVGQIYKQIG 388 Query: 201 NAVAVPVGRALGYAL 245 NAV V + A+G A+ Sbjct: 389 NAVPVNLALAIGKAI 403
>MTA1_RUEGE (P94147) Modification methylase AgeI (EC 2.1.1.37)| (Cytosine-specific methyltransferase AgeI) (M.AgeI) Length = 429 Score = 66.2 bits (160), Expect = 9e-11 Identities = 34/80 (42%), Positives = 48/80 (60%) Frame = +3 Query: 15 FGRLWWDEVVGTVLTCPNIHMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQ 194 + RL WD TV+ +HP DR ++VRE+AR Q FPD+YRF G+ ++RQ Sbjct: 348 YRRLRWDAPSHTVVAHMARDCSDFVHPGIDRFVSVREAARFQSFPDTYRFPGSQFRQFRQ 407 Query: 195 IGNAVAVPVGRALGYALAMA 254 IGNAV +GRA+ + +A Sbjct: 408 IGNAVPPLLGRAMAETIKVA 427
>MTS9_STAAU (P23737) Modification methylase Sau96I (EC 2.1.1.37)| (Cytosine-specific methyltransferase Sau96I) (M.Sau96I) Length = 430 Score = 64.7 bits (156), Expect = 3e-10 Identities = 32/75 (42%), Positives = 45/75 (60%) Frame = +3 Query: 21 RLWWDEVVGTVLTCPNIHMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIG 200 R+ WDE T+ T P+ HP + R ++RE AR+Q FPD + F G V +YRQIG Sbjct: 348 RISWDEPCLTLTTSPSQKQTERCHPDETRPFSIREYARIQSFPDEWEFSGGVGAQYRQIG 407 Query: 201 NAVAVPVGRALGYAL 245 NAV V + + +G +L Sbjct: 408 NAVPVNLAKYIGKSL 422
>MTE8_ECOLI (P50196) Modification methylase Eco47II (EC 2.1.1.37)| (Cytosine-specific methyltransferase Eco47II) (M.Eco47II) Length = 417 Score = 62.4 bits (150), Expect = 1e-09 Identities = 33/72 (45%), Positives = 42/72 (58%) Frame = +3 Query: 21 RLWWDEVVGTVLTCPNIHMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIG 200 RL WDE T+ P HP + R LTVRE AR+Q FPD + F G + +Y+QIG Sbjct: 333 RLSWDEPSLTLTCAPAQKQTERCHPEETRPLTVREYARIQTFPDEWVFEGPMSAKYKQIG 392 Query: 201 NAVAVPVGRALG 236 NAV V + A+G Sbjct: 393 NAVPVNLSFAVG 404
>MTS1_SALIN (P09795) Modification methylase SinI (EC 2.1.1.37)| (Cytosine-specific methyltransferase SinI) (M.SinI) Length = 461 Score = 59.7 bits (143), Expect = 8e-09 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 1/99 (1%) Frame = +3 Query: 21 RLWWDEVVGTVLTCPNIHMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIG 200 R+ WD T++T P + L HP + R L+V+E +Q FP+ + +G + D+YRQ+G Sbjct: 354 RVAWDRPSPTLVTHPAMPATDLAHPDELRPLSVQEYKVIQQFPEEWVIKGKLLDKYRQLG 413 Query: 201 NAVAVPVGRALG-YALAMANLNKTENYPLMVLPPNFSFS 314 NAV + +G A+G L N K E++ PNF +S Sbjct: 414 NAVPIGLGLAVGKNILDHMNGRKIESF------PNFRYS 446
>MTD2_HERAU (P25265) Modification methylase HgiDII (EC 2.1.1.37)| (Cytosine-specific methyltransferase HgiDII) (M.HgiDII) Length = 354 Score = 59.7 bits (143), Expect = 8e-09 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 5/82 (6%) Frame = +3 Query: 15 FGRLWWDEVVGTVLT-CPNIHMQALIHPAQDRLLTVRESARLQGFPDSYRF--RGTVKDR 185 +GR+ WD+V T+ T C HP QDR +++RE+A LQ FP SY+F G +K + Sbjct: 256 YGRMEWDKVAPTITTQCNGYGNGRFGHPEQDRAISLREAALLQTFPRSYQFAPEGQLKFK 315 Query: 186 --YRQIGNAVAVPVGRALGYAL 245 RQIGNAV V +GR + ++ Sbjct: 316 TVSRQIGNAVPVALGRVIAKSI 337
>MTC1_HERAU (P25263) Modification methylase HgiCI (EC 2.1.1.37)| (Cytosine-specific methyltransferase HgiCI) (M.HgiCI) Length = 420 Score = 55.8 bits (133), Expect = 1e-07 Identities = 28/64 (43%), Positives = 39/64 (60%) Frame = +3 Query: 42 VGTVLTCPNIHMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPV 221 V L + H ++H + R +T RE ARLQGFPDS++F YRQ GN+V+VPV Sbjct: 343 VSITLVSSDAHKIGVVHQNRIRRITPRECARLQGFPDSFQFHPKDSLAYRQFGNSVSVPV 402 Query: 222 GRAL 233 +A+ Sbjct: 403 VKAV 406
>MTB1_HERAU (P25262) Modification methylase HgiBI (EC 2.1.1.37)| (Cytosine-specific methyltransferase HgiBI) (M.HgiBI) Length = 437 Score = 55.1 bits (131), Expect = 2e-07 Identities = 30/66 (45%), Positives = 41/66 (62%) Frame = +3 Query: 75 MQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMA 254 +Q ++ P + R +TV E+ARLQGFP S++F +R IGN+VA PV ALG AL Sbjct: 368 IQQVLIPKRYRKITVSEAARLQGFPGSFQFHSNQSANFRLIGNSVAPPVIVALGKALQCV 427 Query: 255 NLNKTE 272 L + E Sbjct: 428 KLFEQE 433
>MTX2_XANOR (P52311) Modification methylase XorII (EC 2.1.1.37)| (Cytosine-specific methyltransferase XorII) (M.XorII) Length = 424 Score = 54.7 bits (130), Expect = 3e-07 Identities = 28/62 (45%), Positives = 38/62 (61%) Frame = +3 Query: 87 IHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMANLNK 266 IHP R++TVRE+ARL +PD +RF T +RQIGN+V + RA+G + A K Sbjct: 308 IHPTVPRVITVREAARLHSYPDWFRFHATKWHGFRQIGNSVPPLLARAVGGQIMKALRKK 367 Query: 267 TE 272 E Sbjct: 368 PE 369
>MT52_METJA (Q58600) Probable modification methylase MJ1200 (EC 2.1.1.37)| (Cytosine-specific methyltransferase MJ1200) (M.MjaVIIP) Length = 366 Score = 54.7 bits (130), Expect = 3e-07 Identities = 25/49 (51%), Positives = 33/49 (67%) Frame = +3 Query: 87 IHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRAL 233 IHP +DRLLT RE ARL +PD + F G ++ Y QIG +V V + RA+ Sbjct: 309 IHPYEDRLLTPREQARLMSYPDYHLFAGGIRSCYNQIGESVPVALSRAI 357
>MTC2_HERAU (P25264) Modification methylase HgiCII (EC 2.1.1.37)| (Cytosine-specific methyltransferase HgiCII) (M.HgiCII) Length = 437 Score = 54.3 bits (129), Expect = 3e-07 Identities = 28/66 (42%), Positives = 42/66 (63%) Frame = +3 Query: 75 MQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMA 254 +Q ++ P + R +TV E+AR+QGFP +++F +R IGN+VA PV ALG AL Sbjct: 368 IQQILIPKRHRPITVNEAARIQGFPATFKFHSNQSANFRLIGNSVAPPVIMALGKALPND 427 Query: 255 NLNKTE 272 +L + E Sbjct: 428 HLFEPE 433
>MT51_METJA (Q57983) Probable modification methylase MJ0563 (EC 2.1.1.37)| (Cytosine-specific methyltransferase MJ0563) (M.MjaVIIIP) Length = 310 Score = 53.1 bits (126), Expect = 8e-07 Identities = 26/49 (53%), Positives = 33/49 (67%) Frame = +3 Query: 87 IHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRAL 233 IHP +DRLLTVRE ARL +PD + F G +Y QIG +V +GRA+ Sbjct: 254 IHPYEDRLLTVREQARLMSYPDDFVFFGGRDVQYNQIGESVPPILGRAI 302
>MTE1_HERAU (P25266) Modification methylase HgiEI (EC 2.1.1.37)| (Cytosine-specific methyltransferase HgiEI) (M.HgiEI) Length = 437 Score = 52.4 bits (124), Expect = 1e-06 Identities = 28/66 (42%), Positives = 40/66 (60%) Frame = +3 Query: 75 MQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMA 254 +Q ++ P + R +TV E+ARLQGFP +++F +R IGN+VA PV ALG L Sbjct: 368 IQQVLIPKRYRPITVSEAARLQGFPSTFKFHSNQSANFRLIGNSVAPPVIVALGKRLQCV 427 Query: 255 NLNKTE 272 L + E Sbjct: 428 KLFEQE 433
>MTM4_NEIGO (P31033) Modification methylase NgoMIV (EC 2.1.1.37)| (Cytosine-specific methyltransferase NgoMIV) (M.NgoMIV) Length = 312 Score = 50.8 bits (120), Expect = 4e-06 Identities = 25/48 (52%), Positives = 31/48 (64%) Frame = +3 Query: 111 LTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMA 254 LTVR +AR+QGFPD ++F G YRQIGNA PV A+G + A Sbjct: 260 LTVRMTARIQGFPDDWQFFGKKTPMYRQIGNAFPPPVAEAVGRQIIKA 307
>MTHA_HAEPH (P50192) Modification methylase HphIA (EC 2.1.1.37)| (Cytosine-specific methyltransferase HphIA) (M.HphIA) (M.Hphi(C)) Length = 372 Score = 50.4 bits (119), Expect = 5e-06 Identities = 27/69 (39%), Positives = 39/69 (56%) Frame = +3 Query: 60 CPNIHMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGY 239 C M+ + H Q+R LTVRE A LQ FPD + F G + +Q+GNAV + +A+ Sbjct: 304 CVTGDMRKVFHYEQNRALTVRELAALQSFPDDFVFLGKKIAQQQQVGNAVPPLLAQAIAE 363 Query: 240 ALAMANLNK 266 A+ N N+ Sbjct: 364 AVLKMNTNE 372
>MTA1_ACEPA (O52702) Modification methylase ApaLI (EC 2.1.1.37)| (Cytosine-specific methyltransferase ApaLI) (M.ApaLI) Length = 429 Score = 48.9 bits (115), Expect = 1e-05 Identities = 25/52 (48%), Positives = 31/52 (59%) Frame = +3 Query: 54 LTCPNIHMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAV 209 LT + IHP + R LT+RE AR+Q FPD YR+ G +QIGNAV Sbjct: 313 LTITGPAAREFIHPTEHRPLTIRECARIQTFPDKYRWVGNNASVIQQIGNAV 364
>MT36_OCEIH (Q8EL95) Putative modification methylase OB3336 (EC 2.1.1.37)| (Cytosine-specific methyltransferase) (M.OihORF3336P) Length = 460 Score = 48.1 bits (113), Expect = 2e-05 Identities = 22/53 (41%), Positives = 36/53 (67%) Frame = +3 Query: 87 IHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGYAL 245 +HP + R ++VRE+ARLQ FPD + F ++ ++QIGNAV + +A+ A+ Sbjct: 399 LHPREPRGISVREAARLQSFPDDFLFDCSMGAAFKQIGNAVPPLLAKAIAEAM 451
>MTH2_HAEPA (P15446) Modification methylase HpaII (EC 2.1.1.37)| (Cytosine-specific methyltransferase HpaII) (M.HpaII) Length = 358 Score = 47.4 bits (111), Expect = 4e-05 Identities = 25/58 (43%), Positives = 35/58 (60%) Frame = +3 Query: 63 PNIHMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALG 236 P +++ ++ R +T RE ARLQGFPDSY + Y+Q GN+VAVP +A G Sbjct: 289 PTTNIKGEVNREGIRKMTPREWARLQGFPDSYVIPVSDASAYKQFGNSVAVPAIQATG 346
>MTNX_NEILA (P24581) Cytosine-specific methyltransferase NlaX (EC 2.1.1.37)| (M.NlaX) Length = 313 Score = 47.4 bits (111), Expect = 4e-05 Identities = 24/50 (48%), Positives = 32/50 (64%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMA 254 R +T E+ARLQGFPDS++ + YRQ GN+V VPV RA+ + A Sbjct: 255 RKITPPEAARLQGFPDSFQIPVSDAQAYRQFGNSVCVPVIRAIAEQMKAA 304
>MTD1_DESDN (P05302) Modification methylase DdeI (EC 2.1.1.37)| (Cytosine-specific methyltransferase DdeI) (M.DdeI) Length = 415 Score = 45.8 bits (107), Expect = 1e-04 Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 11/69 (15%) Frame = +3 Query: 60 CPNI---HMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVK--------DRYRQIGNA 206 CP + IHP +R T RE AR+Q FPD+Y F+G +Y+QIGNA Sbjct: 294 CPTVAASFQSNFIHPFYNRNFTAREGARIQSFPDTYIFQGKRTTMSWEKHLSQYQQIGNA 353 Query: 207 VAVPVGRAL 233 V + +AL Sbjct: 354 VPPLLAQAL 362
>MTBA_BACAR (P19888) Modification methylase BanI (EC 2.1.1.37)| (Cytosine-specific methyltransferase BanI) (M.BanI) Length = 428 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/75 (33%), Positives = 37/75 (49%) Frame = +3 Query: 42 VGTVLTCPNIHMQALIHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPV 221 + LT + H ++ R +T RE ARLQGFPD + Y+Q+GN+V V V Sbjct: 343 ISITLTSSDAHKLGVVQNNVPRRITPRECARLQGFPDDFILHSNDNFAYKQLGNSVTVKV 402 Query: 222 GRALGYALAMANLNK 266 + L N+N+ Sbjct: 403 VEKVIEDLFQNNVNE 417
>MTP2_NEIGO (P08455) Modification methylase NgoPII (EC 2.1.1.37)| (Cytosine-specific methyltransferase NgoPII) (M.NgoPII) Length = 330 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRF-RGTVKDRYRQIGNAVAVPVGRALGYAL 245 R +TVRE AR+QGFPD+++F V D Y+ IGNAV V + + A+ Sbjct: 277 RRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAI 324
>MTAB_SYNP2 (P34883) Modification methylase AquI beta subunit (EC 2.1.1.37)| (Cytosine-specific methyltransferase AquI beta subunit) (M.AquI beta subunit) (M.AquIB) Length = 139 Score = 44.7 bits (104), Expect = 3e-04 Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 11/65 (16%) Frame = +3 Query: 87 IHPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYR-----------QIGNAVAVPVGRAL 233 IHP +DR+LTVRE A LQ FP + F GT D Y Q+GNAV + A+ Sbjct: 65 IHPFEDRMLTVRELACLQTFPLDWEFTGTRLDSYSSKRKVTMTQFGQVGNAVPPLLAEAV 124 Query: 234 GYALA 248 A++ Sbjct: 125 AKAVS 129
>MTN4_NEILA (P50182) Modification methylase NlaIV (EC 2.1.1.37)| (Cytosine-specific methyltransferase NlaIV) (M.NlaIV) Length = 423 Score = 44.7 bits (104), Expect = 3e-04 Identities = 23/47 (48%), Positives = 29/47 (61%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGYAL 245 R LT +E RL G+PD Y F KD+Y +GN VAVPV +A+ L Sbjct: 373 RTLTGKEGLRLFGYPDDYSFDIPKKDKYDLLGNTVAVPVIKAVSERL 419
>MTF1_FUSNU (P34906) Modification methylase FnuDI (EC 2.1.1.37)| (Cytosine-specific methyltransferase FnuDI) (M.FnuDI) Length = 344 Score = 43.9 bits (102), Expect = 5e-04 Identities = 20/38 (52%), Positives = 30/38 (78%), Gaps = 1/38 (2%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGT-VKDRYRQIGNAVAV 215 R L++RE AR+QGFPD+++F T ++D Y+ +GNAV V Sbjct: 276 RRLSIRECARIQGFPDTFKFYYTSLEDGYKMVGNAVPV 313
>MTH3_HAEAE (P20589) Modification methylase HaeIII (EC 2.1.1.37)| (Cytosine-specific methyltransferase HaeIII) (M.HaeIII) Length = 330 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 1/38 (2%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFR-GTVKDRYRQIGNAVAV 215 R LTVRE AR+QGFPD + F ++ D Y+ IGNAV V Sbjct: 273 RRLTVRECARVQGFPDDFIFHYESLNDGYKMIGNAVPV 310
>MTF7_NEIGO (Q59606) Modification methylase NgoFVII (EC 2.1.1.37)| (Cytosine-specific methyltransferase NgoFVII) (M.NgoFVII) (M.NgoVII) Length = 374 Score = 42.7 bits (99), Expect = 0.001 Identities = 21/40 (52%), Positives = 25/40 (62%) Frame = +3 Query: 90 HPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAV 209 H + R T RE ARLQ FPD + F G+ + RQIGNAV Sbjct: 286 HFPEPRAFTNRERARLQSFPDDFEFVGSTTEVRRQIGNAV 325
>MTB5_NEIGO (Q59605) Modification methylase NgoBV (EC 2.1.1.37)| (Cytosine-specific methyltransferase NgoBV) (M.NgoBV) (M.NgoV) Length = 423 Score = 42.0 bits (97), Expect = 0.002 Identities = 23/47 (48%), Positives = 28/47 (59%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGYAL 245 R LT +E RL G+PD Y F KDR +GN VAVPV +A+ L Sbjct: 373 RTLTGKEGLRLFGYPDDYPFDIPKKDRCDLLGNTVAVPVIKAVSERL 419
>MTHT_METTF (P29567) Modification methylase MthTI (EC 2.1.1.37)| (Cytosine-specific methyltransferase MthTI) (M.MthTI) Length = 330 Score = 41.6 bits (96), Expect = 0.002 Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +3 Query: 93 PAQDRLLTVRESARLQGFPDSYRF-RGTVKDRYRQIGNAVAVPVGRAL 233 P R L+VRE AR+QGFPD + F V D Y +GNAV V + L Sbjct: 270 PKPYRRLSVRECARIQGFPDDFIFYYKNVADGYTMVGNAVPVKLAEEL 317
>MTS2_SHISO (P34879) Modification methylase SsoII (EC 2.1.1.37)| (Cytosine-specific methyltransferase SsoII) (M.SsoII) Length = 379 Score = 41.6 bits (96), Expect = 0.002 Identities = 20/43 (46%), Positives = 28/43 (65%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRAL 233 R +T RE++RLQGFP + + Y+Q GN+VAVPV A+ Sbjct: 327 RKITPREASRLQGFPSDFIIPVSDTQAYKQFGNSVAVPVINAI 369
>MTD5_DACSA (P50185) Modification methylase DsaV (EC 2.1.1.37)| (Cytosine-specific methyltransferase DsaV) (M.DsaV) Length = 351 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/43 (51%), Positives = 29/43 (67%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRAL 233 R+LT RE ARLQGFP+S+ + +RQ GN+V V V RA+ Sbjct: 259 RVLTPRECARLQGFPESFVIPVSDCQAWRQFGNSVPVSVIRAI 301
>MTSA_LACLC (P34877) Modification methylase ScrFIA (EC 2.1.1.37)| (Cytosine-specific methyltransferase ScrFIA) (M.ScrFIA) (M.ScrFI-A) Length = 389 Score = 41.2 bits (95), Expect = 0.003 Identities = 19/43 (44%), Positives = 29/43 (67%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRAL 233 R +T RE+ARLQGFP+++ + Y++ GN+VAVP A+ Sbjct: 334 RKITPREAARLQGFPENFIIPVSDTQAYKEFGNSVAVPTIHAI 376
>MTH1_HAEHA (P05102) Modification methylase HhaI (EC 2.1.1.37)| (Cytosine-specific methyltransferase HhaI) (M.HhaI) Length = 327 Score = 40.8 bits (94), Expect = 0.004 Identities = 18/45 (40%), Positives = 27/45 (60%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGY 239 R L RE AR+ G+PDSY+ + Y+Q GN+V + V + + Y Sbjct: 272 RKLHPRECARVMGYPDSYKVHPSTSQAYKQFGNSVVINVLQYIAY 316
>MTBR_BACSU (P06530) Modification methylase BsuRI (EC 2.1.1.37)| (Cytosine-specific methyltransferase BsuRI) (M.BsuRI) Length = 436 Score = 40.8 bits (94), Expect = 0.004 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 10/69 (14%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRF-RGT---------VKDRYRQIGNAVAVPVGRALGYALAMA 254 R L+V+E AR+Q FPD ++F +GT + +Y+QIGNAV V + +A+ +A Sbjct: 346 RRLSVKEIARVQTFPDWFQFSQGTNSQTSINNRLDKQYKQIGNAVPVLLAKAVASPIANW 405 Query: 255 NLNKTENYP 281 +N E+ P Sbjct: 406 AINYLESSP 414
>DCM_ECOLI (P0AED9) DNA-cytosine methyltransferase (EC 2.1.1.37) (M.EcoDcm)| Length = 472 Score = 39.3 bits (90), Expect = 0.011 Identities = 26/51 (50%), Positives = 29/51 (56%), Gaps = 4/51 (7%) Frame = +3 Query: 105 RLLTVRESARLQGF--PDSYRFRGTVKDR--YRQIGNAVAVPVGRALGYAL 245 R LT RE ARL GF P +FR V D YRQ GN+V VPV A+ L Sbjct: 400 RRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLL 450
>DCM_ECO57 (P0AEE0) DNA-cytosine methyltransferase (EC 2.1.1.37)| Length = 472 Score = 39.3 bits (90), Expect = 0.011 Identities = 26/51 (50%), Positives = 29/51 (56%), Gaps = 4/51 (7%) Frame = +3 Query: 105 RLLTVRESARLQGF--PDSYRFRGTVKDR--YRQIGNAVAVPVGRALGYAL 245 R LT RE ARL GF P +FR V D YRQ GN+V VPV A+ L Sbjct: 400 RRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLL 450
>MTN1_NOCAE (P50188) Modification methylase NaeI (EC 2.1.1.37)| (Cytosine-specific methyltransferase NaeI) (M.NaeI) Length = 413 Score = 38.5 bits (88), Expect = 0.019 Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +3 Query: 111 LTVRESARLQGFPDS-YRFRGTVKDRYRQIGNAVAVPVGRALGYALAMA 254 LT AR+QG+ D + F G RYRQIGNA PV A+G + A Sbjct: 265 LTCEMVARIQGWRDGEWIFEGRKTSRYRQIGNAFPPPVAEAIGKRIRAA 313
>DNMT2_MOUSE (O55055) DNA (cytosine-5)-methyltransferase-like protein 2 (Dnmt2)| (DNA methyltransferase homolog MmuIIP) (DNA MTase homolog MmuIIP) (M.MmuIIP) (Met-2) Length = 415 Score = 38.1 bits (87), Expect = 0.025 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRF--RGTVKDRYRQIGNAVAVPVGRALGYALAMANLNKTENY 278 R T +E A LQGFP + F + TVK RYR +GN++ V V L L N +E+ Sbjct: 341 RYFTPKEIANLQGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVAKLLTVLCEGFGNASESC 400 Query: 279 PLMVL 293 M L Sbjct: 401 HKMPL 405
>MTB1_BREBE (P34905) Modification methylase BbvI (EC 2.1.1.37)| (Cytosine-specific methyltransferase BbvI) (M.BbvI) Length = 374 Score = 38.1 bits (87), Expect = 0.025 Identities = 21/40 (52%), Positives = 24/40 (60%) Frame = +3 Query: 90 HPAQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAV 209 H + R LT RE ARLQ FPD Y F G + +QIG AV Sbjct: 289 HWEEPRALTNRERARLQTFPDDYEFIGKKEMVRKQIGMAV 328
>MTH5_HAEIN (P45000) Modification methylase HindV (EC 2.1.1.37)| (Cytosine-specific methyltransferase HindV) (M.HindV) Length = 304 Score = 37.7 bits (86), Expect = 0.033 Identities = 25/57 (43%), Positives = 31/57 (54%) Frame = +3 Query: 96 AQDRLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMANLNK 266 A+ R LT E + +Q FP S+ F GT D + IGN AVPV A A A+ N K Sbjct: 243 AKVRPLTTIERSYIQTFPKSFLFSGTKTDLEQMIGN--AVPVNLAKFVASAIINFEK 297
>MTE2_ECOLI (P05101) Modification methylase EcoRII (EC 2.1.1.37)| (Cytosine-specific methyltransferase EcoRII) (M.EcoRII) Length = 477 Score = 37.7 bits (86), Expect = 0.033 Identities = 26/51 (50%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Frame = +3 Query: 105 RLLTVRESARLQGFP--DSYRFRGTVKDR--YRQIGNAVAVPVGRALGYAL 245 R LT RE ARL GF D FR V D YRQ GN+V VPV A+ L Sbjct: 409 RRLTPRECARLMGFEKVDGRPFRIPVSDTQSYRQFGNSVVVPVFEAVAKLL 459
>MTS1_STRAH (O31073) Modification methylase SacI (EC 2.1.1.37)| (Cytosine-specific methyltransferase SacI) (M.SacI) Length = 390 Score = 37.4 bits (85), Expect = 0.043 Identities = 19/47 (40%), Positives = 26/47 (55%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGYAL 245 R V E R+ FPD + F G ++ RQIGN V V +G+ + AL Sbjct: 318 RRFRVAEMKRIMTFPDEFVFTGVKREVQRQIGNPVPVELGKVVVRAL 364
>MTB1_BACSH (P13906) Modification methylase BspRI (EC 2.1.1.37)| (Cytosine-specific methyltransferase BspRI) (M.BspRI) Length = 424 Score = 37.4 bits (85), Expect = 0.043 Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 10/58 (17%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFR--GTVK--------DRYRQIGNAVAVPVGRALGYALA 248 R L+V+E R+Q FPD Y F G +K +Y+QIGNAV V + RA+ ++A Sbjct: 345 RRLSVKEIKRIQTFPDWYEFSDGGNMKVSVNNRLDKQYKQIGNAVPVFLTRAVAKSIA 402
>MTM1_MORSP (P11408) Modification methylase MspI (EC 2.1.1.37)| (Cytosine-specific methyltransferase MspI) (M.MspI) Length = 418 Score = 37.0 bits (84), Expect = 0.057 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMA 254 RLLT E + GFP + + YRQ+GN+V VPV + +++A Sbjct: 351 RLLTTNECKAIMGFPKDFVIPVSRTQMYRQMGNSVVVPVVTKIAEQISLA 400
>MTBF_BACSU (P17044) Modification methylase BsuFI (EC 2.1.1.37)| (Cytosine-specific methyltransferase BsuFI) (M.BsuFI) Length = 409 Score = 37.0 bits (84), Expect = 0.057 Identities = 19/47 (40%), Positives = 28/47 (59%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALGYAL 245 RL + E RL GFP ++ + YRQ GN+VAVP+ +A+ A+ Sbjct: 349 RLFSELELKRLMGFPVDFKVPVSRTQMYRQFGNSVAVPMIKAVAGAM 395
>MTH2_HAEAE (O30868) Modification methylase HaeII (EC 2.1.1.37)| (Cytosine-specific methyltransferase HaeII) (M.HaeII) Length = 318 Score = 36.6 bits (83), Expect = 0.074 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Frame = +3 Query: 12 PFGRLWWDEVVGTVLTCP--------NIHMQALIHPAQDRLLTVRESARLQGFPDSYRFR 167 P+ +W + + G V P + +++ R LT E RLQGFPD++ Sbjct: 214 PYPSIWHENISGNVSALPYSCALSVGGSYNYLVVNGV--RRLTGPEMLRLQGFPDTFEIN 271 Query: 168 GTVKDRYRQIGNAVAVPVGRAL 233 + GN+V+VPV RA+ Sbjct: 272 IPYSQVRKVAGNSVSVPVIRAI 293
>MTS3_STAAU (P16668) Modification methylase Sau3AI (EC 2.1.1.37)| (Cytosine-specific methyltransferase Sau3AI) (M.Sau3AI) Length = 412 Score = 36.6 bits (83), Expect = 0.074 Identities = 19/44 (43%), Positives = 27/44 (61%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPVGRALG 236 R LT E+ RL GFPD++ +K RY +GNA+ VP+ +G Sbjct: 349 RTLTPIEAERLNGFPDNWTEGMPIKMRYFCMGNALVVPLITRIG 392
>MTB1_NEIGO (Q59603) Modification methylase NgoBI (EC 2.1.1.37)| (Cytosine-specific methyltransferase NgoBI) (M.NgoBI) (M.NgoI) Length = 317 Score = 36.2 bits (82), Expect = 0.096 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGTVKDRYRQIGNAVAVPV---GRALGYALAMANLNKTEN 275 R LT RE RLQGFPD + + GN+V+VPV R + L A NK N Sbjct: 249 RRLTGREMLRLQGFPDDFEINIPYSQVRKVAGNSVSVPVIEATRKICSLLFPARSNKKGN 308 Query: 276 Y 278 + Sbjct: 309 W 309
>DNMT2_HUMAN (O14717) DNA (cytosine-5)-methyltransferase-like protein 2 (Dnmt2)| (DNA methyltransferase homolog HsaIIP) (DNA MTase homolog HsaIIP) (M.HsaIIP) (PuMet) Length = 391 Score = 34.3 bits (77), Expect = 0.37 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRF--RGTVKDRYRQIGNAVAVPV 221 R T +E A L GFP + F + TVK RYR +GN++ V V Sbjct: 341 RYFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHV 381
>PMT1_SCHPO (P40999) DNA methyltransferase homolog pmt1 (SpIM.SpoI) (M.SpomI)| Length = 330 Score = 33.9 bits (76), Expect = 0.48 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 3/44 (6%) Frame = +3 Query: 99 QDRLLTVRESARLQGFPDSYRF---RGTVKDRYRQIGNAVAVPV 221 Q R T RE ARL GFP+S + T K YR +GN++ V V Sbjct: 273 QLRYFTAREVARLMGFPESLEWSKSNVTEKCMYRLLGNSINVKV 316
>MTB1_BREEP (P10283) Modification methylase BepI (EC 2.1.1.37)| (Cytosine-specific methyltransferase BepI) (M.BepI) Length = 403 Score = 33.5 bits (75), Expect = 0.63 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 8/56 (14%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRF--------RGTVKDRYRQIGNAVAVPVGRALGYALA 248 R LTVRE A +Q FP Y F + Y+ IGNAV +G A+G L+ Sbjct: 339 RRLTVRECALIQSFPPDYEFVFNYGKANSVSASAAYKIIGNAVPPLLGFAIGRHLS 394
>MTA1_CELCE (P31974) Modification methylase AluI (EC 2.1.1.37)| (Cytosine-specific methyltransferase AluI) (M.AluI) Length = 521 Score = 33.1 bits (74), Expect = 0.82 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Frame = +3 Query: 102 DRLLTVRESARLQGFPDSYRF-RGTVKDRYRQIGNAVAVPVGR 227 +R L+ RE+ARLQG P+ + F Y+Q+GN V V V R Sbjct: 436 ERRLSPRETARLQGLPEWFDFGEQRAAATYKQMGNGVNVGVVR 478
>GAG_BLVAU (P25058) Gag polyprotein [Contains: Core protein p15 (Matrix| protein); Core protein p24; Core protein p12] Length = 391 Score = 32.7 bits (73), Expect = 1.1 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = -3 Query: 399 NRDDGLKPRQTCQPLGFANLTKECLLYCERMRSWVVAP*GDNFQSCSDW 253 N DG+ L +AN KEC + R V AP G Q+C+ W Sbjct: 265 NLPDGVPKEPIIDSLSYANANKECQQILQG-RGLVAAPVGQKLQACAHW 312
>MTB6_BACSF (P43420) Modification methylase Bsp6I (EC 2.1.1.37)| (Cytosine-specific methyltransferase Bsp6I) (M.Bsp6I) Length = 315 Score = 30.8 bits (68), Expect = 4.1 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +3 Query: 105 RLLTVRESARLQGFPDSYRFRGTVKDR-YRQIGNAVAVPVGRAL 233 R LT RE QG+P+ + Y+Q GN+V VPV R + Sbjct: 263 RKLTPRECFNFQGYPEDFILPELAPTHLYKQAGNSVVVPVIRRI 306
>Y324_TREPA (O83344) Hypothetical protein TP0324| Length = 485 Score = 30.4 bits (67), Expect = 5.3 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 2/37 (5%) Frame = +1 Query: 94 LRRTDCSLFVKVLDC--KVFLIATGFVEQSKTGIARL 198 +RR +CSLFV ++ C VF +GFV+Q G+ R+ Sbjct: 7 VRRFECSLFVVLVLCALAVFDPLSGFVQQKLAGVQRV 43
>DPEP_SOLTU (Q06801) 4-alpha-glucanotransferase, chloroplast precursor (EC| 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) Length = 576 Score = 30.0 bits (66), Expect = 6.9 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 9/77 (11%) Frame = +3 Query: 174 VKDRYRQIGNAVAVPVGRALGYALAMANLNKTE------NYPLMV--LPPN-FSFSHNIE 326 V+D R G ++ + +GY A NK + +PL+V +PP+ FS + + Sbjct: 279 VRDYARSKGISIMGDMPIYVGYHSADVWANKKQFLLNRKGFPLIVSGVPPDAFSETGQLW 338 Query: 327 GTP*SDWQNLTVDMFAW 377 G+P DW+ + D F+W Sbjct: 339 GSPLYDWKAMEKDGFSW 355 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 106,092,116 Number of Sequences: 219361 Number of extensions: 2301874 Number of successful extensions: 5124 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 4951 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5109 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6825954960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
