ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags24h17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AM039900.1| Hordeum vulgare partial mRNA for chromomethylase... 1360 0.0
2gb|BT009291.1| Triticum aestivum clone wlm0.pk0028.h3:fis, full ... 755 0.0
3ref|XM_476210.1| Oryza sativa (japonica cultivar-group), predic... 293 4e-76
4dbj|AK111685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 287 2e-74
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 147 6e-32
6gb|AC098835.2| Oryza sativa (japonica cultivar-group) chromosome... 147 6e-32
7gb|AC170584.4| Mus musculus chromosome 1, clone RP24-360E22, com... 42 2.4
8gb|AC102603.11| Mus musculus chromosome 14, clone RP23-385I17, c... 42 2.4
9gb|AC119230.16| Mus musculus chromosome 1, clone RP24-210L3, com... 42 2.4
10emb|AL606612.3|OSJN00043 Oryza sativa genomic DNA, chromosome 4,... 42 2.4
11gb|AC005992.15| Mus musculus strain 129X1/SvJ ES cell line RW4 c... 42 2.4
12gb|AC007049.8| Mus musculus strain 129X1/SvJ ES cell line RW4 ch... 42 2.4
13dbj|AK172243.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 2.4
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
15emb|AL606992.3|OSJN00116 Oryza sativa genomic DNA, chromosome 4,... 42 2.4
16gb|AC118013.20| Mus musculus chromosome 1, clone RP23-455M18, co... 42 2.4
17gb|AC164652.3| Ornithorhynchus anatinus BAC clone OABb-566A1 fro... 42 2.4
18gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 40 9.4
19gb|AC087860.2| Bos taurus clone RP42-135P2, complete sequence 40 9.4
20gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 9.4
21gb|AC122488.3| Mus musculus BAC clone RP24-383B2 from chromosome... 40 9.4
22gb|U97015.1| Caenorhabditis elegans cosmid F48C1, complete sequence 40 9.4
23emb|BX248409.5| Human DNA sequence from clone RP11-360D2 on chro... 40 9.4
24emb|AJ786595.1| Cordyceps sp. 3083.H partial 18S rRNA gene, ITS1... 40 9.4
25emb|AJ786594.1| Cordyceps sp. 3002.H partial 18S rRNA gene, ITS1... 40 9.4
26emb|AJ786593.1| Cordyceps sp. 2870.H partial 18S rRNA gene, ITS1... 40 9.4
27gb|AC084823.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, R... 40 9.4
28gb|AC009312.4| Homo sapiens BAC clone RP11-425F6 from 2, complet... 40 9.4
29gb|U61375.1|HSU61375 Human cosmid LL12NC01-N-184C4, ETV6 gene, e... 40 9.4
30emb|AL954655.9| Zebrafish DNA sequence from clone CH211-226H7, c... 40 9.4
31gb|AC142258.4| Mus musculus BAC clone RP24-511I20 from 13, compl... 40 9.4
32emb|AL603864.8| Mouse DNA sequence from clone RP23-478N15 on chr... 40 9.4
33emb|AL603837.8| Mouse DNA sequence from clone RP23-254F2 on chro... 40 9.4 
>emb|AM039900.1| Hordeum vulgare partial mRNA for chromomethylase 2 (cmt2 gene)
          Length = 1077

 Score = 1360 bits (686), Expect = 0.0
 Identities = 686/686 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatgcttaagaccttttggtcgattatggtgggatgaggtagtgggaactgtgctgacgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gatgcttaagaccttttggtcgattatggtgggatgaggtagtgggaactgtgctgacgt 288

                                                                       
Query: 61  gtccaaatattcatatgcaggccttgatacatcctgcgcaggacagactgctcactgttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtccaaatattcatatgcaggccttgatacatcctgcgcaggacagactgctcactgttc 348

                                                                       
Query: 121 gtgaaagtgctcgattgcaaggttttcctgatagctacaggtttcgtggaacagtcaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gtgaaagtgctcgattgcaaggttttcctgatagctacaggtttcgtggaacagtcaaag 408

                                                                       
Query: 181 acaggtatcgccagattggaaatgctgtggccgtacccgttggccgtgcacttgggtatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 acaggtatcgccagattggaaatgctgtggccgtacccgttggccgtgcacttgggtatg 468

                                                                       
Query: 241 ccttggccatggccaatctgaacaagactgaaaattatcccctcatggtgctaccaccca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ccttggccatggccaatctgaacaagactgaaaattatcccctcatggtgctaccaccca 528

                                                                       
Query: 301 acttctcattctctcacaatatagaaggcactccttagtcagattggcaaaacctaacgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 acttctcattctctcacaatatagaaggcactccttagtcagattggcaaaacctaacgg 588

                                                                       
Query: 361 ttgacatgtttgcctgggtttaagtccgtcatctctgttcattctccgctagaaaagctg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ttgacatgtttgcctgggtttaagtccgtcatctctgttcattctccgctagaaaagctg 648

                                                                       
Query: 421 gtctattgctgcacctcatggtcgtgaatatcattagggctcatgaatatcgttagggca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gtctattgctgcacctcatggtcgtgaatatcattagggctcatgaatatcgttagggca 708

                                                                       
Query: 481 tgcccattttaacataagttttgattcattttattgccatgttgtacctggtaacatctt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tgcccattttaacataagttttgattcattttattgccatgttgtacctggtaacatctt 768

                                                                       
Query: 541 agtttcttagaactttccggaggcaggtgtaagttgctcagtaaggtttctcctgagaga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 agtttcttagaactttccggaggcaggtgtaagttgctcagtaaggtttctcctgagaga 828

                                                                       
Query: 601 accttgtgttgtacggtaaaagaatgtatgcatcataactttgtcacatacatttgttag 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 accttgtgttgtacggtaaaagaatgtatgcatcataactttgtcacatacatttgttag 888

                                     
Query: 661 aagctcagatgggcaggtgtaggtgg 686
           ||||||||||||||||||||||||||
Sbjct: 889 aagctcagatgggcaggtgtaggtgg 914
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>gb|BT009291.1| Triticum aestivum clone wlm0.pk0028.h3:fis, full insert mRNA
           sequence
          Length = 681

 Score =  755 bits (381), Expect = 0.0
 Identities = 493/529 (93%), Gaps = 1/529 (0%)
 Strand = Plus / Plus

                                                                       
Query: 159 aggtttcgtggaacagtcaaagacaggtatcgccagattggaaatgctgtggccgtaccc 218
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 6   aggtttcgtggaacagtcaaagacaggtatcgccagattgggaatgctgtggccgtaccc 65

                                                                       
Query: 219 gttggccgtgcacttgggtatgccttggccatggccaatctgaacaagactgaaaattat 278
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 66  gttggccgtgcacttgggtatgccttggccatggccaatctgaacaagactggaaatgat 125

                                                                       
Query: 279 cccctcatggtgctaccacccaacttctcattctctcacaatatagaaggcactccttag 338
           |||||||||| ||||||||| || ||  |||||||||| ||||||||||| |||||||||
Sbjct: 126 cccctcatggcgctaccacctaagtttgcattctctcataatatagaaggtactccttag 185

                                                                       
Query: 339 tcagattggcaaaacctaacggttgacatgtttgcctgggtttaagtc-cgtcatctctg 397
           ||||| ||||||||||||||||||||| |||   || ||||||||||| ||||||||| |
Sbjct: 186 tcagactggcaaaacctaacggttgacttgtccacccgggtttaagtctcgtcatctccg 245

                                                                       
Query: 398 ttcattctccgctagaaaagctggtctattgctgcacctcatggtcgtgaatatcattag 457
           ||||||||| ||||||||||||||   || ||||||||||||||||||||||| ||||||
Sbjct: 246 ttcattctctgctagaaaagctgggtcatcgctgcacctcatggtcgtgaataccattag 305

                                                                       
Query: 458 ggctcatgaatatcgttagggcatgcccattttaacataagttttgattcattttattgc 517
           | ||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 306 gactcgtgaatatcgttagggcatgcccattttaacacaagtcttgattcattttattgc 365

                                                                       
Query: 518 catgttgtacctggtaacatcttagtttcttagaactttccggaggcaggtgtaagttgc 577
           |||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 366 catgttgtaccttgtaacatcttagtttcttagaagtttccgtaggcaggtgtaagttgc 425

                                                                       
Query: 578 tcagtaaggtttctcctgagagaaccttgtgttgtacggtaaaagaatgtatgcatcata 637
           ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||
Sbjct: 426 tcagtaaggtttctcctgagagaaccttgtgttgtattgtaaaagaatgtatgtatcata 485

                                                            
Query: 638 actttgtcacatacatttgttagaagctcagatgggcaggtgtaggtgg 686
           ||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 486 actttgtcacacacatttgttagaagctcacatgggcaggtgtaggtgg 534
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>ref|XM_476210.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3978

 Score =  293 bits (148), Expect = 4e-76
 Identities = 268/308 (87%)
 Strand = Plus / Plus

                                                                        
Query: 6    ttaagaccttttggtcgattatggtgggatgaggtagtgggaactgtgctgacgtgtcca 65
            |||||||||||||||||| ||||||||||||||||||||||||| ||||||||   ||||
Sbjct: 3646 ttaagaccttttggtcgagtatggtgggatgaggtagtgggaaccgtgctgacagttcca 3705

                                                                        
Query: 66   aatattcatatgcaggccttgatacatcctgcgcaggacagactgctcactgttcgtgaa 125
            |||   | |||||||||||||||||||||||| || ||||||||||| ||| ||||||||
Sbjct: 3706 aatgcccgtatgcaggccttgatacatcctgcacaagacagactgcttactattcgtgaa 3765

                                                                        
Query: 126  agtgctcgattgcaaggttttcctgatagctacaggtttcgtggaacagtcaaagacagg 185
            |||||||| |||||||| |||||||| |  ||||||||||||||||||||||||||||||
Sbjct: 3766 agtgctcggttgcaaggctttcctgacaattacaggtttcgtggaacagtcaaagacagg 3825

                                                                        
Query: 186  tatcgccagattggaaatgctgtggccgtacccgttggccgtgcacttgggtatgccttg 245
            |||||||||||||||||||| ||||||||||| ||||| || |||||||| || ||| ||
Sbjct: 3826 tatcgccagattggaaatgcggtggccgtacctgttggacgagcacttggatacgccctg 3885

                                                                        
Query: 246  gccatggccaatctgaacaagactgaaaattatcccctcatggtgctaccacccaacttc 305
            || |||||| | ||||| ||| ||| | |  ||||||| ||| |||| || |||||||| 
Sbjct: 3886 gcgatggcctacctgaagaagtctggagacgatccccttatgttgctgccgcccaacttt 3945

                    
Query: 306  tcattctc 313
             |||||||
Sbjct: 3946 gcattctc 3953
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>dbj|AK111685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170M08, full
           insert sequence
          Length = 1401

 Score =  287 bits (145), Expect = 2e-74
 Identities = 223/249 (89%)
 Strand = Plus / Plus

                                                                       
Query: 6   ttaagaccttttggtcgattatggtgggatgaggtagtgggaactgtgctgacgtgtcca 65
           |||||||||||||||||| ||||||||||||||||||||||||| ||||||||   ||||
Sbjct: 608 ttaagaccttttggtcgagtatggtgggatgaggtagtgggaaccgtgctgacagttcca 667

                                                                       
Query: 66  aatattcatatgcaggccttgatacatcctgcgcaggacagactgctcactgttcgtgaa 125
           |||   | |||||||||||||||||||||||| || ||||||||||| ||| ||||||||
Sbjct: 668 aatgcccgtatgcaggccttgatacatcctgcacaagacagactgcttactattcgtgaa 727

                                                                       
Query: 126 agtgctcgattgcaaggttttcctgatagctacaggtttcgtggaacagtcaaagacagg 185
           |||||||| |||||||| |||||||| |  ||||||||||||||||||||||||||||||
Sbjct: 728 agtgctcggttgcaaggctttcctgacaattacaggtttcgtggaacagtcaaagacagg 787

                                                                       
Query: 186 tatcgccagattggaaatgctgtggccgtacccgttggccgtgcacttgggtatgccttg 245
           |||||||||||||||||||| ||||||||||| ||||| || |||||||| || ||| ||
Sbjct: 788 tatcgccagattggaaatgcggtggccgtacctgttggacgagcacttggatacgccctg 847

                    
Query: 246 gccatggcc 254
           || ||||||
Sbjct: 848 gcgatggcc 856
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  147 bits (74), Expect = 6e-32
 Identities = 101/110 (91%)
 Strand = Plus / Minus

                                                                           
Query: 78      caggccttgatacatcctgcgcaggacagactgctcactgttcgtgaaagtgctcgattg 137
               |||||||||||||||||||| || ||||||||||| ||| |||||||||||||||| |||
Sbjct: 7535652 caggccttgatacatcctgcacaagacagactgcttactattcgtgaaagtgctcggttg 7535593

                                                                 
Query: 138     caaggttttcctgatagctacaggtttcgtggaacagtcaaagacaggta 187
               ||||| |||||||| |  ||||||||||||||||||||||||||||||||
Sbjct: 7535592 caaggctttcctgacaattacaggtttcgtggaacagtcaaagacaggta 7535543



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 110/132 (83%)
 Strand = Plus / Minus

                                                                           
Query: 182     caggtatcgccagattggaaatgctgtggccgtacccgttggccgtgcacttgggtatgc 241
               |||||||||||||||||||||||| ||||||||||| ||||| || |||||||| || ||
Sbjct: 7534483 caggtatcgccagattggaaatgcggtggccgtacctgttggacgagcacttggatacgc 7534424

                                                                           
Query: 242     cttggccatggccaatctgaacaagactgaaaattatcccctcatggtgctaccacccaa 301
               | |||| |||||| | ||||| ||| ||| | |  ||||||| ||| |||| || |||||
Sbjct: 7534423 cctggcgatggcctacctgaagaagtctggagacgatccccttatgttgctgccgcccaa 7534364

                           
Query: 302     cttctcattctc 313
               |||  |||||||
Sbjct: 7534363 ctttgcattctc 7534352



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                                 
Query: 9       agaccttttggtcgattatggtgggatgaggtagtgggaactgtgctgac 58
               ||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 7535795 agaccttttggtcgagtatggtgggatgaggtagtgggaaccgtgctgac 7535746
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>gb|AC098835.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1732_H01,
             complete sequence
          Length = 85722

 Score =  147 bits (74), Expect = 6e-32
 Identities = 101/110 (91%)
 Strand = Plus / Minus

                                                                         
Query: 78    caggccttgatacatcctgcgcaggacagactgctcactgttcgtgaaagtgctcgattg 137
             |||||||||||||||||||| || ||||||||||| ||| |||||||||||||||| |||
Sbjct: 55252 caggccttgatacatcctgcacaagacagactgcttactattcgtgaaagtgctcggttg 55193

                                                               
Query: 138   caaggttttcctgatagctacaggtttcgtggaacagtcaaagacaggta 187
             ||||| |||||||| |  ||||||||||||||||||||||||||||||||
Sbjct: 55192 caaggctttcctgacaattacaggtttcgtggaacagtcaaagacaggta 55143



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 110/132 (83%)
 Strand = Plus / Minus

                                                                         
Query: 182   caggtatcgccagattggaaatgctgtggccgtacccgttggccgtgcacttgggtatgc 241
             |||||||||||||||||||||||| ||||||||||| ||||| || |||||||| || ||
Sbjct: 54083 caggtatcgccagattggaaatgcggtggccgtacctgttggacgagcacttggatacgc 54024

                                                                         
Query: 242   cttggccatggccaatctgaacaagactgaaaattatcccctcatggtgctaccacccaa 301
             | |||| |||||| | ||||| ||| ||| | |  ||||||| ||| |||| || |||||
Sbjct: 54023 cctggcgatggcctacctgaagaagtctggagacgatccccttatgttgctgccgcccaa 53964

                         
Query: 302   cttctcattctc 313
             |||  |||||||
Sbjct: 53963 ctttgcattctc 53952



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                               
Query: 9     agaccttttggtcgattatggtgggatgaggtagtgggaactgtgctgac 58
             ||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 55395 agaccttttggtcgagtatggtgggatgaggtagtgggaaccgtgctgac 55346
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>gb|AC170584.4| Mus musculus chromosome 1, clone RP24-360E22, complete sequence
          Length = 162582

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 503    gattcattttattgccatgtt 523
              |||||||||||||||||||||
Sbjct: 137925 gattcattttattgccatgtt 137905
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>gb|AC102603.11| Mus musculus chromosome 14, clone RP23-385I17, complete sequence
          Length = 204565

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 497   agttttgattcattttattgc 517
             |||||||||||||||||||||
Sbjct: 68057 agttttgattcattttattgc 68037
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>gb|AC119230.16| Mus musculus chromosome 1, clone RP24-210L3, complete sequence
          Length = 160913

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 503   gattcattttattgccatgtt 523
             |||||||||||||||||||||
Sbjct: 71380 gattcattttattgccatgtt 71400
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>emb|AL606612.3|OSJN00043 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0021I10,
             complete sequence
          Length = 105538

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 509   ttttattgccatgttgtacct 529
             |||||||||||||||||||||
Sbjct: 91540 ttttattgccatgttgtacct 91560
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>gb|AC005992.15| Mus musculus strain 129X1/SvJ ES cell line RW4 chromosome 1q21-23 clone
              mgs1-68e20, complete sequence
          Length = 154284

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 503    gattcattttattgccatgtt 523
              |||||||||||||||||||||
Sbjct: 113205 gattcattttattgccatgtt 113185
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>gb|AC007049.8| Mus musculus strain 129X1/SvJ ES cell line RW4 chromosome 1q21-23 clone
             mgs1-166n14, complete sequence
          Length = 85931

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 503   gattcattttattgccatgtt 523
             |||||||||||||||||||||
Sbjct: 44853 gattcattttattgccatgtt 44833
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>dbj|AK172243.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830109B09 product:unclassifiable, full
           insert sequence
          Length = 3060

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 503 gattcattttattgccatgtt 523
           |||||||||||||||||||||
Sbjct: 973 gattcattttattgccatgtt 953
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 509    ttttattgccatgttgtacct 529
              |||||||||||||||||||||
Sbjct: 779400 ttttattgccatgttgtacct 779420
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>emb|AL606992.3|OSJN00116 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L13,
           complete sequence
          Length = 143386

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 509 ttttattgccatgttgtacct 529
           |||||||||||||||||||||
Sbjct: 61  ttttattgccatgttgtacct 81
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>gb|AC118013.20| Mus musculus chromosome 1, clone RP23-455M18, complete sequence
          Length = 183224

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 503    gattcattttattgccatgtt 523
              |||||||||||||||||||||
Sbjct: 174806 gattcattttattgccatgtt 174786
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>gb|AC164652.3| Ornithorhynchus anatinus BAC clone OABb-566A1 from chromosome unknown,
             complete sequence
          Length = 145427

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 502   tgattcattttattgccatgt 522
             |||||||||||||||||||||
Sbjct: 70600 tgattcattttattgccatgt 70620
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 247     ccatggccaatctgaacaag 266
               ||||||||||||||||||||
Sbjct: 1513157 ccatggccaatctgaacaag 1513138
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>gb|AC087860.2| Bos taurus clone RP42-135P2, complete sequence
          Length = 203696

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 572    agttgctcagtaaggtttct 591
              ||||||||||||||||||||
Sbjct: 121648 agttgctcagtaaggtttct 121629
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>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 572    agttgctcagtaaggtttct 591
              ||||||||||||||||||||
Sbjct: 712152 agttgctcagtaaggtttct 712133
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>gb|AC122488.3| Mus musculus BAC clone RP24-383B2 from chromosome 17, complete sequence
          Length = 206003

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    cccaacttctcattctctca 316
              ||||||||||||||||||||
Sbjct: 174849 cccaacttctcattctctca 174868
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>gb|U97015.1| Caenorhabditis elegans cosmid F48C1, complete sequence
          Length = 30783

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 496   aagttttgattcattttatt 515
             ||||||||||||||||||||
Sbjct: 27962 aagttttgattcattttatt 27981
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>emb|BX248409.5| Human DNA sequence from clone RP11-360D2 on chromosome 1 Contains the
             5' end of a novel gene (FLJ45235), a novel gene, the 5'
             end of the gene for Kelch motif containing protein, a
             ribosomal protein S27 (metallopanstimulin 1)  (RPS27)
             pseudogene and a CpG island, complete sequence
          Length = 127227

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   tgaacaagactgaaaattat 278
             ||||||||||||||||||||
Sbjct: 85895 tgaacaagactgaaaattat 85914
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>emb|AJ786595.1| Cordyceps sp. 3083.H partial 18S rRNA gene, ITS1, 5.8S rRNA gene,
           ITS2 and partial 28S rRNA gene, strain 3083.H
          Length = 501

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 496 aagttttgattcattttatt 515
           ||||||||||||||||||||
Sbjct: 174 aagttttgattcattttatt 155
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>emb|AJ786594.1| Cordyceps sp. 3002.H partial 18S rRNA gene, ITS1, 5.8S rRNA gene,
           ITS2 and partial 28S rRNA gene, strain 3002.H
          Length = 501

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 496 aagttttgattcattttatt 515
           ||||||||||||||||||||
Sbjct: 174 aagttttgattcattttatt 155
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>emb|AJ786593.1| Cordyceps sp. 2870.H partial 18S rRNA gene, ITS1, 5.8S rRNA gene,
           ITS2 and partial 28S rRNA gene, strain 2870.H
          Length = 497

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 496 aagttttgattcattttatt 515
           ||||||||||||||||||||
Sbjct: 174 aagttttgattcattttatt 155
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>gb|AC084823.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-290L7, Complete
             Sequence, complete sequence
          Length = 212133

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 664   ctcagatgggcaggtgtagg 683
             ||||||||||||||||||||
Sbjct: 45962 ctcagatgggcaggtgtagg 45981
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>gb|AC009312.4| Homo sapiens BAC clone RP11-425F6 from 2, complete sequence
          Length = 204834

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 486    attttaacataagttttgat 505
              ||||||||||||||||||||
Sbjct: 177000 attttaacataagttttgat 177019
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>gb|U61375.1|HSU61375 Human cosmid LL12NC01-N-184C4, ETV6 gene, exons 4 and 5 and partial
            cds
          Length = 39825

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 591  tcctgagagaaccttgtgtt 610
            ||||||||||||||||||||
Sbjct: 9929 tcctgagagaaccttgtgtt 9910
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>emb|AL954655.9| Zebrafish DNA sequence from clone CH211-226H7, complete sequence
          Length = 207351

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 644   tcacatacatttgttagaag 663
             ||||||||||||||||||||
Sbjct: 36246 tcacatacatttgttagaag 36265
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>gb|AC142258.4| Mus musculus BAC clone RP24-511I20 from 13, complete sequence
          Length = 159880

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    tattgccatgttgtacctgg 531
              ||||||||||||||||||||
Sbjct: 112742 tattgccatgttgtacctgg 112723
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>emb|AL603864.8| Mouse DNA sequence from clone RP23-478N15 on chromosome 15, complete
             sequence
          Length = 178412

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 664   ctcagatgggcaggtgtagg 683
             ||||||||||||||||||||
Sbjct: 40644 ctcagatgggcaggtgtagg 40625
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>emb|AL603837.8| Mouse DNA sequence from clone RP23-254F2 on chromosome 15, complete
             sequence
          Length = 202904

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 664   ctcagatgggcaggtgtagg 683
             ||||||||||||||||||||
Sbjct: 57139 ctcagatgggcaggtgtagg 57158


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,573,747
Number of Sequences: 3902068
Number of extensions: 5573747
Number of successful extensions: 102776
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102639
Number of HSP's gapped (non-prelim): 133
length of query: 686
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 663
effective length of database: 17,143,297,704
effective search space: 11366006377752
effective search space used: 11366006377752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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