>DIM_ARATH (Q39085) Cell elongation protein DIMINUTO (Cell elongation protein|
           Dwarf1)
          Length = 561

 Score =  337 bits (864), Expect(2) = 5e-93
 Identities = 149/178 (83%), Positives = 164/178 (92%)
 Frame = +1

Query: 22  WFYQHAQTALKKGEFVEYIPTREYYHRHTRCLYWEGKLILPFGDQFWFRFLFGWLMPPKV 201
           WFYQHAQTALKKG+FVEYIPTREYYHRHTRCLYWEGKLILPFGDQFWFR+L GWLMPPKV
Sbjct: 312 WFYQHAQTALKKGQFVEYIPTREYYHRHTRCLYWEGKLILPFGDQFWFRYLLGWLMPPKV 371

Query: 202 SLLKATQGDAIRNYYHDNHVIQDMLVPLYKVGDALEFVHQEMEVYPLWLCPHRLFKLPVK 381
           SLLKATQG+AIRNYYHD HVIQDMLVPLYKVGDALE+VH+EMEVYP+WLCPH+LFK P+K
Sbjct: 372 SLLKATQGEAIRNYYHDMHVIQDMLVPLYKVGDALEWVHREMEVYPIWLCPHKLFKQPIK 431

Query: 382 TMIYPEPGFEHHQRQGDTSYAQMFTDVGVYYTPAFIFRGEQFDGVEAVKRLEQWLIEN 555
             IYPEPGFE+  RQGDT  AQM+TDVGVYY P  + RGE+FDG EAV+R+E+WLIEN
Sbjct: 432 GQIYPEPGFEYENRQGDTEDAQMYTDVGVYYAPGCVLRGEEFDGSEAVRRMEKWLIEN 489



 Score = 23.9 bits (50), Expect(2) = 5e-93
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 2   VGWWFKP 22
           VGWWFKP
Sbjct: 305 VGWWFKP 311

>DIM_PEA (P93472) Cell elongation protein diminuto|
          Length = 567

 Score =  325 bits (832), Expect = 7e-89
 Identities = 146/180 (81%), Positives = 162/180 (90%)
 Frame = +1

Query: 16  QAWFYQHAQTALKKGEFVEYIPTREYYHRHTRCLYWEGKLILPFGDQFWFRFLFGWLMPP 195
           + WFYQHA+TALKKG FVEYIPTREYYHRHTRCLYWEGKLILPFGDQF FRFLFGWLMPP
Sbjct: 312 KTWFYQHAETALKKGLFVEYIPTREYYHRHTRCLYWEGKLILPFGDQFSFRFLFGWLMPP 371

Query: 196 KVSLLKATQGDAIRNYYHDNHVIQDMLVPLYKVGDALEFVHQEMEVYPLWLCPHRLFKLP 375
           KVSLLKATQG+AIRNYYH+ HVIQDMLVPLYKVGDALE+  +EME+YP+WLCPH+LFKLP
Sbjct: 372 KVSLLKATQGEAIRNYYHEMHVIQDMLVPLYKVGDALEWSDREMEIYPIWLCPHKLFKLP 431

Query: 376 VKTMIYPEPGFEHHQRQGDTSYAQMFTDVGVYYTPAFIFRGEQFDGVEAVKRLEQWLIEN 555
           +KTMIYPE GFE  +RQGDT  AQMFTDVGVYY P  + RGE FDG EAV+++E W+IEN
Sbjct: 432 IKTMIYPEAGFELQRRQGDTQNAQMFTDVGVYYAPGPVLRGEVFDGAEAVRKMESWMIEN 491

>DHC24_MACFA (Q60HC5) 24-dehydrocholesterol reductase precursor (EC 1.3.1.-)|
           (3-beta-hydroxysterol delta-24-reductase)
          Length = 516

 Score =  149 bits (376), Expect = 5e-36
 Identities = 75/182 (41%), Positives = 113/182 (62%), Gaps = 1/182 (0%)
 Frame = +1

Query: 4   GVVVQAWFYQHAQTALKKG-EFVEYIPTREYYHRHTRCLYWEGKLILPFGDQFWFRFLFG 180
           G   + WF++H +  LK   E +EYIP R YYHRHTR ++WE + I+PFG+   FR+LFG
Sbjct: 297 GNYYKPWFFKHVENYLKTNREGLEYIPLRHYYHRHTRSIFWELQDIIPFGNNPIFRYLFG 356

Query: 181 WLMPPKVSLLKATQGDAIRNYYHDNHVIQDMLVPLYKVGDALEFVHQEMEVYPLWLCPHR 360
           W++PPK+SLLK TQG+ +R  Y  +HV+QDMLVP+  +  AL     ++ VYP+WLCP  
Sbjct: 357 WMVPPKISLLKLTQGETLRKLYEQHHVVQDMLVPMKCLQQALHTFQNDIHVYPIWLCP-- 414

Query: 361 LFKLPVKTMIYPEPGFEHHQRQGDTSYAQMFTDVGVYYTPAFIFRGEQFDGVEAVKRLEQ 540
            F LP       +PG  H +     + A+++ D+G Y  P    R + F+    +++LE+
Sbjct: 415 -FILP------SQPGLVHPK----GNEAELYIDIGAYGEP----RVKHFEARSCMRQLEK 459

Query: 541 WL 546
           ++
Sbjct: 460 FV 461

>DHC24_HUMAN (Q15392) 24-dehydrocholesterol reductase precursor (EC 1.3.1.-)|
           (3-beta-hydroxysterol delta-24-reductase) (Seladin-1)
           (Diminuto/dwarf1 homolog)
          Length = 516

 Score =  149 bits (376), Expect = 5e-36
 Identities = 75/182 (41%), Positives = 113/182 (62%), Gaps = 1/182 (0%)
 Frame = +1

Query: 4   GVVVQAWFYQHAQTALKKG-EFVEYIPTREYYHRHTRCLYWEGKLILPFGDQFWFRFLFG 180
           G   + WF++H +  LK   E +EYIP R YYHRHTR ++WE + I+PFG+   FR+LFG
Sbjct: 297 GNYYKPWFFKHVENYLKTNREGLEYIPLRHYYHRHTRSIFWELQDIIPFGNNPIFRYLFG 356

Query: 181 WLMPPKVSLLKATQGDAIRNYYHDNHVIQDMLVPLYKVGDALEFVHQEMEVYPLWLCPHR 360
           W++PPK+SLLK TQG+ +R  Y  +HV+QDMLVP+  +  AL     ++ VYP+WLCP  
Sbjct: 357 WMVPPKISLLKLTQGETLRKLYEQHHVVQDMLVPMKCLQQALHTFQNDIHVYPIWLCP-- 414

Query: 361 LFKLPVKTMIYPEPGFEHHQRQGDTSYAQMFTDVGVYYTPAFIFRGEQFDGVEAVKRLEQ 540
            F LP       +PG  H +     + A+++ D+G Y  P    R + F+    +++LE+
Sbjct: 415 -FILP------SQPGLVHPK----GNEAELYIDIGAYGEP----RVKHFEARSCMRQLEK 459

Query: 541 WL 546
           ++
Sbjct: 460 FV 461

>DIML_CAEEL (O17397) Diminuto-like protein|
          Length = 525

 Score =  137 bits (346), Expect = 2e-32
 Identities = 57/119 (47%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
 Frame = +1

Query: 22  WFYQHAQTAL-KKGEFVEYIPTREYYHRHTRCLYWEGKLILPFGDQFWFRFLFGWLMPPK 198
           WFY H +  + KK E +EYIP R+YYHRH++ ++WE + I+PFG+   FR+L  W+ PPK
Sbjct: 312 WFYTHVEDLINKKHESIEYIPLRDYYHRHSKSIFWELRDIVPFGNNVLFRYLMAWMCPPK 371

Query: 199 VSLLKATQGDAIRNYYHDNHVIQDMLVPLYKVGDALEFVHQEMEVYPLWLCPHRLFKLP 375
           ++ LKAT  + +R  Y  +HV+QDMLVPL K+ + ++  H+E+E+YP+WLCP  L   P
Sbjct: 372 IAFLKATTPNVLRKLYDRSHVLQDMLVPLDKLEECIDLFHKEVEIYPMWLCPFYLKSQP 430

>CU093_HUMAN (P59091) Protein C21orf93|
          Length = 139

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 31/92 (33%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
 Frame = +3

Query: 30  PARADGAEEGRV-----CGVHPYEGVLPQAHPVPVLGGEAHPALRRPVLVQVPLWLADAP 194
           PA A G    RV     C  HP++G  P   P+P  G E    LR     + P    D  
Sbjct: 26  PAAAGGGVGPRVMLSSLCREHPWQGRCP---PIPAHGKEVRQ-LRHLHRTRPPDTHQDMA 81

Query: 195 QGVPAQGHPGRRHQELLP*QPCHPGHAGAPVQ 290
           +G      PG  H   LP +P H  H   PVQ
Sbjct: 82  RG------PGLPHTHGLPARPSHVRHQTEPVQ 107

>HPSE_MOUSE (Q6YGZ1) Heparanase precursor (EC 3.2.-.-) (Endo-glucoronidase)|
           [Contains: Heparanase 8 kDa subunit; Heparanase 50 kDa
           subunit]
          Length = 535

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
 Frame = +1

Query: 157 FWFRFLFGWLMPPKVSL--LKATQGDAIRNYYHDNHVIQDMLVPLYKVGDALEFVHQEME 330
           +W   LF  L+ P+V L  +K      +R Y H  +V      P Y+ GD   +V     
Sbjct: 396 YWLSLLFKKLVGPRVLLSRVKGPDRSKLRVYLHCTNVYH----PRYQEGDLTLYVLNLHN 451

Query: 331 VYPLWLCPHRLFKLPVKTMIYPEPG 405
           V      P  LF+ PV T +    G
Sbjct: 452 VTKYLKVPPPLFRKPVDTYLLKPSG 476

>NELFA_DROME (Q86NP2) Negative elongation factor A homolog|
          Length = 1248

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +3

Query: 90   VLPQAHPVPVLGGEAHPALRRPVLVQVPLWLADAPQGVPAQGHPGRRHQ 236
            ++ Q  P  V+G      + RPV+  V   L   PQG+     PG++ Q
Sbjct: 997  IVQQQQPTNVIGNSQQQTIIRPVMTNVGGGLTTLPQGLTLIQRPGQQPQ 1045

>EFP_SYNY3 (Q55119) Elongation factor P (EF-P)|
          Length = 187

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
 Frame = +1

Query: 202 SLLKATQGDAIRNYYHDNHVIQDMLVPLYKVGDALEFVHQEMEVYPL-WLCPHRLFKLP- 375
           S+++ T  D  +  + D    +++ +    +GD  +F+ +EMEV  + W       +LP 
Sbjct: 68  SVMQHTYKDGDQYVFMDMETFEEVSIAPDTLGDKAKFIKEEMEVSVVTWDGTILDVELPT 127

Query: 376 --VKTMIYPEPGFEHHQRQGDTSYAQMFTDVGVYYTPAFIFRGEQ 504
             V  ++  +PG +     G T  A + T   V   P FI +GE+
Sbjct: 128 SVVLEIVETDPGVKGDTATGGTKPAILETGAQV-MVPLFIAQGER 171

>PRLR_RABIT (P14787) Prolactin receptor precursor (PRL-R)|
          Length = 616

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
 Frame = -3

Query: 182 QPKRNLNQNWSPK-----GRMSFPSQYRHRVCLW*YSLVGMYSTNSPFFSAVCAC 33
           +PK N+   W P+     G+M + S    +   W     G ++TNSP+ +    C
Sbjct: 385 KPKANVTHTWDPQTISLVGKMPYLSVNGSKSSTWPLLQPGQHNTNSPYHNIADMC 439

>Y918_MYCLE (Q9CCE3) UPF0124 protein ML0918|
          Length = 249

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 20/57 (35%), Positives = 24/57 (42%)
 Frame = +3

Query: 132 AHPALRRPVLVQVPLWLADAPQGVPAQGHPGRRHQELLP*QPCHPGHAGAPVQGWRR 302
           + PAL    +  VP+ L+DA  GV A  H G          PC    AG     WRR
Sbjct: 98  SQPALPVVTIHCVPVLLSDARPGVTAAVHVGEGRGSARCASPCDGYDAGPGCVRWRR 154

>RS3_BUCAI (P57585) 30S ribosomal protein S3|
          Length = 233

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +1

Query: 430 DTSYAQMFTDVGVYYTPAFIFRGEQFDGVEAVKRLEQ 540
           D S ++  T  GV     +IF+GE   G+E V+RL++
Sbjct: 183 DYSISEAHTTYGVIGVKVWIFKGEILGGMETVERLDK 219

>MBD2_MOUSE (Q9Z2E1) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding|
           protein MBD2)
          Length = 414

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/49 (38%), Positives = 21/49 (42%)
 Frame = +3

Query: 9   GGSSLVLPARADGAEEGRVCGVHPYEGVLPQAHPVPVLGGEAHPALRRP 155
           GGS L      DG      CGV    GV P+  PVP   G + P  R P
Sbjct: 100 GGSGL----GGDGGGGAGGCGVGSGGGVAPRRDPVPFPSGSSGPGPRGP 144

>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor|
          Length = 1763

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
 Frame = +3

Query: 123  GGEAHPALRRPVLVQVPLWLADAP-----QGVPAQGHPGRRHQELLP*QPCHPGHAGAP 284
            G    P LR P   Q P  L   P     +G P  G PG   ++ LP  P  PG  GAP
Sbjct: 1041 GLPGQPGLRGP---QGPPGLPGLPGLKGDEGQPGYGAPGLMGEKGLPGLPGKPGRPGAP 1096

>PDUW_SALTY (P74879) Probable propionate kinase (EC 2.7.2.15)|
          Length = 404

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = +3

Query: 69  GVHPYEGVLPQAHPVPVLGGEAHPALRRPVLVQVPLWLADAPQGVPAQGHPGRRHQ 236
           G+H +  +LP A  V V     H  L  P  +    W   A  G+   G  G  H+
Sbjct: 129 GIHVFRQLLPDAPSVAVFDTAFHQTLDEPAYIYPLPWHYYAELGIRRYGFHGTSHK 184


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,969,102
Number of Sequences: 219361
Number of extensions: 1512524
Number of successful extensions: 5029
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5007
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)