| Clone Name | bags24e07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SYLC_PONPY (Q5R614) Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.... | 49 | 1e-05 | 2 | SYLC_HUMAN (Q9P2J5) Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.... | 49 | 1e-05 | 3 | SYLC_MOUSE (Q8BMJ2) Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.... | 49 | 2e-05 | 4 | SYLC_CAEEL (Q09996) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine... | 37 | 0.055 | 5 | SYLC_YEAST (P26637) Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.... | 32 | 1.8 |
|---|
>SYLC_PONPY (Q5R614) Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.4)| (Leucine--tRNA ligase) (LeuRS) Length = 1176 Score = 49.3 bits (116), Expect = 1e-05 Identities = 35/139 (25%), Positives = 57/139 (41%) Frame = +1 Query: 160 IYVNEHYDGWKEQCLRVLQSNFDSQTCSFAPDEEINEALRNCFIDRESNFKQVQKLCMPF 339 IYV ++Y W+ L VL+ +F++ ++ I L + K+ K MPF Sbjct: 938 IYVAKNYPPWQHTTLSVLRKHFEANNRKLPDNKVIASELGSM-----PELKKYMKKVMPF 992 Query: 340 IRFKKDEARNVGPQALNLKLPFGXXXXXXXXXXXXRRQLGLEHVEVLSALDGAARAKAGK 519 + K+ +GP+ L+L+L F L LEH+EV K Sbjct: 993 VAMIKENLEKMGPRILDLQLEFDEKAVLMENIVYLTNSLELEHIEV----------KFAS 1042 Query: 520 HASLLDKNPPSPGEPVAIF 576 A + PG+P+ +F Sbjct: 1043 EAEDKIREDCCPGKPLNVF 1061
>SYLC_HUMAN (Q9P2J5) Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.4)| (Leucine--tRNA ligase) (LeuRS) Length = 1176 Score = 49.3 bits (116), Expect = 1e-05 Identities = 35/139 (25%), Positives = 57/139 (41%) Frame = +1 Query: 160 IYVNEHYDGWKEQCLRVLQSNFDSQTCSFAPDEEINEALRNCFIDRESNFKQVQKLCMPF 339 IYV ++Y W+ L VL+ +F++ ++ I L + K+ K MPF Sbjct: 938 IYVAKNYPPWQHTTLSVLRKHFEANNGKLPDNKVIASELGSM-----PELKKYMKKVMPF 992 Query: 340 IRFKKDEARNVGPQALNLKLPFGXXXXXXXXXXXXRRQLGLEHVEVLSALDGAARAKAGK 519 + K+ +GP+ L+L+L F L LEH+EV K Sbjct: 993 VAMIKENLEKMGPRILDLQLEFDEKAVLMENIVYLTNSLELEHIEV----------KFAS 1042 Query: 520 HASLLDKNPPSPGEPVAIF 576 A + PG+P+ +F Sbjct: 1043 EAEDKIREDCCPGKPLNVF 1061
>SYLC_MOUSE (Q8BMJ2) Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.4)| (Leucine--tRNA ligase) (LeuRS) Length = 1178 Score = 48.5 bits (114), Expect = 2e-05 Identities = 35/149 (23%), Positives = 61/149 (40%) Frame = +1 Query: 160 IYVNEHYDGWKEQCLRVLQSNFDSQTCSFAPDEEINEALRNCFIDRESNFKQVQKLCMPF 339 IYV ++Y W+ L L+S+F++ ++ I L + K+ K MPF Sbjct: 940 IYVAKNYPVWQHITLTTLRSHFEANNGKLPDNKVIASELGSL-----PELKKYMKKVMPF 994 Query: 340 IRFKKDEARNVGPQALNLKLPFGXXXXXXXXXXXXRRQLGLEHVEVLSALDGAARAKAGK 519 + K+ GP+ L+L+L F L LEH+EV A + + Sbjct: 995 VAMIKENMEKKGPRVLDLELEFDEQAVLMENIVYLTNSLELEHIEVKFASEAEDKV---- 1050 Query: 520 HASLLDKNPPSPGEPVAIFMSKQEFEVQI 606 + PG+P+ +F ++ V + Sbjct: 1051 ------REECCPGKPLNVFRTEPGVPVSL 1073
>SYLC_CAEEL (Q09996) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 1186 Score = 37.0 bits (84), Expect = 0.055 Identities = 24/110 (21%), Positives = 44/110 (40%) Frame = +1 Query: 148 TVGLIYVNEHYDGWKEQCLRVLQSNFDSQTCSFAPDEEINEALRNCFIDRESNFKQVQKL 327 T +IYV + Y W++ L +L+ + + ++ I++ I +E + K+ K Sbjct: 938 TEAVIYVAKEYPPWQKTILDILEKQAKANNGALPDNKAISQ-----LIGKEESLKKFAKK 992 Query: 328 CMPFIRFKKDEARNVGPQALNLKLPFGXXXXXXXXXXXXRRQLGLEHVEV 477 MPF++ K+ G AL P L L+ V + Sbjct: 993 AMPFVQMIKERFEQKGVSALASSSPVDQTSILNENIDFIMNALDLDRVTI 1042
>SYLC_YEAST (P26637) Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.4)| (Leucine--tRNA ligase) (LeuRS) Length = 1090 Score = 32.0 bits (71), Expect = 1.8 Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 1/121 (0%) Frame = +1 Query: 160 IYVNEHYDGWKEQCLRVLQSNFDSQTCSFAPDEEINEALRNCFIDRESNFKQVQKLCMPF 339 + ++E + W+ QC+ +++ F QT + N+ +R +E K MPF Sbjct: 950 LLISESFPEWQSQCVEIVRKLFSEQTL------DDNKKVREHIEPKE------MKRAMPF 997 Query: 340 IRFKKDEARNVGPQ-ALNLKLPFGXXXXXXXXXXXXRRQLGLEHVEVLSALDGAARAKAG 516 I K N P+ +L F ++ + SA+ AK G Sbjct: 998 ISLLKQRLANEKPEDVFERELQFSEIDTVKAAARNVKKAAQALKIAEFSAISFPYGAKTG 1057 Query: 517 K 519 K Sbjct: 1058 K 1058 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,799,416 Number of Sequences: 219361 Number of extensions: 1719517 Number of successful extensions: 4280 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4165 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4277 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)