| Clone Name | bags24e07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 371 bits (187), Expect = 2e-99 Identities = 471/566 (83%) Strand = Plus / Plus Query: 19 ctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttgcttcag 78 ||||| | ||| ||||||||||||||||||||||| ||| | | |||||| |||| ||| Sbjct: 114963 ctaagaattgctaacaaatatttacaggactccatagttaaattcaggaagctgctccag 115022 Query: 79 aagcaagagtctggttccaagaaacccaagaagggagccgcacctcctccatcagcagaa 138 |||||||| ||||||||||||||||||||||||||| | |||||||||||||| | || Sbjct: 115023 aagcaagaatctggttccaagaaacccaagaagggaactgcacctcctccatctgagcaa 115082 Query: 139 aacaagctcactgttggtctgatatatgtcaacgagcactatgatggatggaaagaacaa 198 |||||||| |||||||||||| | || ||||| ||| ||||| ||||||||||||| ||| Sbjct: 115083 aacaagctgactgttggtctggtctacgtcaatgagaactattatggatggaaagagcaa 115142 Query: 199 tgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcccccgacgag 258 ||||||||||| || || || || |||||||||||| || | | ||||| || || ||| Sbjct: 115143 tgtttgagggttctccagtctaaatttgatagccaagcacgtttgtttgctcctgatgag 115202 Query: 259 gagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttcaaacaagta 318 |||||||| ||||| || | |||||||| ||||| | ||| | || ||||||||||| Sbjct: 115203 gagattaatgaagcattgaagaactgctccatcggacaggaaactaacttcaaacaagtc 115262 Query: 319 cagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaacgttggtccc 378 ||||||||||||||||||||||||| || || |||||||| || |||| ||||| ||| Sbjct: 115263 cagaagctctgcatgcctttcatcaagtcgaaaaaagatgaggcgaggagtgttgggccc 115322 Query: 379 caggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggagaacctagag 438 || ||| | |||||||||||||||||||||||||| | ||| || ||||||||| | ||| Sbjct: 115323 cacgctttgaatttgaagcttccttttggtgaaatgagtgttctcgaggagaacttggag 115382 Query: 439 ctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcacttgatggagct 498 ||||||| |||||| | || ||||| |||| ||||||||||| || ||||| ||| Sbjct: 115383 ctgatcaagaggcaggtaggccttgaacatgcagaggtcctgtctgcttctgatgaggct 115442 Query: 499 gctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgccttcccctggt 558 |||||||| |||||||| |||||||||| |||| ||||||| |||||||| |||||| Sbjct: 115443 gctcgtgctaaagctggcgtgcatgcttctatgctggacaagaccccgccttctcctggt 115502 Query: 559 gagccggttgcaatattcatgagcaa 584 ||||| || ||||| ||||||||||| Sbjct: 115503 gagccagtagcaatcttcatgagcaa 115528
>dbj|AK099796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097H06, full insert sequence Length = 3673 Score = 371 bits (187), Expect = 2e-99 Identities = 471/566 (83%) Strand = Plus / Plus Query: 19 ctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttgcttcag 78 ||||| | ||| ||||||||||||||||||||||| ||| | | |||||| |||| ||| Sbjct: 2837 ctaagaattgctaacaaatatttacaggactccatagttaaattcaggaagctgctccag 2896 Query: 79 aagcaagagtctggttccaagaaacccaagaagggagccgcacctcctccatcagcagaa 138 |||||||| ||||||||||||||||||||||||||| | |||||||||||||| | || Sbjct: 2897 aagcaagaatctggttccaagaaacccaagaagggaactgcacctcctccatctgagcaa 2956 Query: 139 aacaagctcactgttggtctgatatatgtcaacgagcactatgatggatggaaagaacaa 198 |||||||| |||||||||||| | || ||||| ||| ||||| ||||||||||||| ||| Sbjct: 2957 aacaagctgactgttggtctggtctacgtcaatgagaactattatggatggaaagagcaa 3016 Query: 199 tgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcccccgacgag 258 ||||||||||| || || || || |||||||||||| || | | ||||| || || ||| Sbjct: 3017 tgtttgagggttctccagtctaaatttgatagccaagcacgtttgtttgctcctgatgag 3076 Query: 259 gagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttcaaacaagta 318 |||||||| ||||| || | |||||||| ||||| | ||| | || ||||||||||| Sbjct: 3077 gagattaatgaagcattgaagaactgctccatcggacaggaaactaacttcaaacaagtc 3136 Query: 319 cagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaacgttggtccc 378 ||||||||||||||||||||||||| || || |||||||| || |||| ||||| ||| Sbjct: 3137 cagaagctctgcatgcctttcatcaagtcgaaaaaagatgaggcgaggagtgttgggccc 3196 Query: 379 caggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggagaacctagag 438 || ||| | |||||||||||||||||||||||||| | ||| || ||||||||| | ||| Sbjct: 3197 cacgctttgaatttgaagcttccttttggtgaaatgagtgttctcgaggagaacttggag 3256 Query: 439 ctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcacttgatggagct 498 ||||||| |||||| | || ||||| |||| ||||||||||| || ||||| ||| Sbjct: 3257 ctgatcaagaggcaggtaggccttgaacatgcagaggtcctgtctgcttctgatgaggct 3316 Query: 499 gctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgccttcccctggt 558 |||||||| |||||||| |||||||||| |||| ||||||| |||||||| |||||| Sbjct: 3317 gctcgtgctaaagctggcgtgcatgcttctatgctggacaagaccccgccttctcctggt 3376 Query: 559 gagccggttgcaatattcatgagcaa 584 ||||| || ||||| ||||||||||| Sbjct: 3377 gagccagtagcaatcttcatgagcaa 3402
>dbj|AK062108.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B04, full insert sequence Length = 1434 Score = 371 bits (187), Expect = 2e-99 Identities = 471/566 (83%) Strand = Plus / Plus Query: 19 ctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttgcttcag 78 ||||| | ||| ||||||||||||||||||||||| ||| | | |||||| |||| ||| Sbjct: 617 ctaagaattgctaacaaatatttacaggactccatagttaaattcaggaagctgctccag 676 Query: 79 aagcaagagtctggttccaagaaacccaagaagggagccgcacctcctccatcagcagaa 138 |||||||| ||||||||||||||||||||||||||| | |||||||||||||| | || Sbjct: 677 aagcaagaatctggttccaagaaacccaagaagggaactgcacctcctccatctgagcaa 736 Query: 139 aacaagctcactgttggtctgatatatgtcaacgagcactatgatggatggaaagaacaa 198 |||||||| |||||||||||| | || ||||| ||| ||||| ||||||||||||| ||| Sbjct: 737 aacaagctgactgttggtctggtctacgtcaatgagaactattatggatggaaagagcaa 796 Query: 199 tgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcccccgacgag 258 ||||||||||| || || || || |||||||||||| || | | ||||| || || ||| Sbjct: 797 tgtttgagggttctccagtctaaatttgatagccaagcacgtttgtttgctcctgatgag 856 Query: 259 gagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttcaaacaagta 318 |||||||| ||||| || | |||||||| ||||| | ||| | || ||||||||||| Sbjct: 857 gagattaatgaagcattgaagaactgctccatcggacaggaaactaacttcaaacaagtc 916 Query: 319 cagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaacgttggtccc 378 ||||||||||||||||||||||||| || || |||||||| || |||| ||||| ||| Sbjct: 917 cagaagctctgcatgcctttcatcaagtcgaaaaaagatgaggcgaggagtgttgggccc 976 Query: 379 caggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggagaacctagag 438 || ||| | |||||||||||||||||||||||||| | ||| || ||||||||| | ||| Sbjct: 977 cacgctttgaatttgaagcttccttttggtgaaatgagtgttctcgaggagaacttggag 1036 Query: 439 ctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcacttgatggagct 498 ||||||| |||||| | || ||||| |||| ||||||||||| || ||||| ||| Sbjct: 1037 ctgatcaagaggcaggtaggccttgaacatgcagaggtcctgtctgcttctgatgaggct 1096 Query: 499 gctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgccttcccctggt 558 |||||||| |||||||| |||||||||| |||| ||||||| |||||||| |||||| Sbjct: 1097 gctcgtgctaaagctggcgtgcatgcttctatgctggacaagaccccgccttctcctggt 1156 Query: 559 gagccggttgcaatattcatgagcaa 584 ||||| || ||||| ||||||||||| Sbjct: 1157 gagccagtagcaatcttcatgagcaa 1182
>dbj|AK100624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108I24, full insert sequence Length = 3669 Score = 355 bits (179), Expect = 1e-94 Identities = 469/566 (82%) Strand = Plus / Plus Query: 19 ctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttgcttcag 78 ||||| | ||| ||||||||||||||||||||||| ||| | | |||||| |||| ||| Sbjct: 2837 ctaagaattgctaacaaatatttacaggactccatagttaaattcaggaagctgctccag 2896 Query: 79 aagcaagagtctggttccaagaaacccaagaagggagccgcacctcctccatcagcagaa 138 |||||||| ||||||||||||||||||||||||||| | |||||||||||||| | || Sbjct: 2897 aagcaagaatctggttccaagaaacccaagaagggaactgcacctcctccatctgagcaa 2956 Query: 139 aacaagctcactgttggtctgatatatgtcaacgagcactatgatggatggaaagaacaa 198 |||||||| |||||||||||| | || ||||| ||| ||||| ||||||||||||| ||| Sbjct: 2957 aacaagctgactgttggtctggtctacgtcaatgagaactattatggatggaaagagcaa 3016 Query: 199 tgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcccccgacgag 258 ||||||||||| || || || || |||||||||||| || | | ||||| | || ||| Sbjct: 3017 tgtttgagggttctccagtctaaatttgatagccaagcacgtttgtttgctactgatgag 3076 Query: 259 gagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttcaaacaagta 318 |||||||| ||||| || | |||||||| ||||| | ||| | || ||||||| ||| Sbjct: 3077 gagattaatgaagcattgaagaactgctccatcggacaggaaactaacttcaaacgagtc 3136 Query: 319 cagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaacgttggtccc 378 ||||||||||||||||||||||||| || || |||||||| || |||| ||||| ||| Sbjct: 3137 cagaagctctgcatgcctttcatcaagtcgaaaaaagatgaggcgaggagtgttgggccc 3196 Query: 379 caggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggagaacctagag 438 || ||| | |||||||||||||||||||||||||| | ||| || ||||||||| | ||| Sbjct: 3197 cacgctttgaatttgaagcttccttttggtgaaatgagtgttctcgaggagaacttggag 3256 Query: 439 ctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcacttgatggagct 498 ||||||| |||||| | || ||||| |||| ||||||||||| || ||||| ||| Sbjct: 3257 ctgatcaagaggcaggtaggccttgaacatgcagaggtcctgtctgcttctgatgaggct 3316 Query: 499 gctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgccttcccctggt 558 |||||||| |||||||| |||||||||| |||| ||||||| |||||||| |||||| Sbjct: 3317 gctcgtgctaaagctggcgtgcatgcttctatgctggacaagaccccgccttctcctggt 3376 Query: 559 gagccggttgcaatattcatgagcaa 584 ||||| || ||||| ||||||||||| Sbjct: 3377 gagccagtagcaatcttcatgagcaa 3402
>ref|XM_450769.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3772 Score = 287 bits (145), Expect = 2e-74 Identities = 482/594 (81%), Gaps = 3/594 (0%) Strand = Plus / Plus Query: 13 cctactctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttg 72 ||||||||||| | ||| |||||||||||||||||||| || ||| | | |||||| || Sbjct: 2819 cctactctaagaattgcaaacaaatatttacaggactctatagttaaattcaggaagctg 2878 Query: 73 cttcagaagcaagagtctggttccaagaaacccaagaagggagccgc---acctcctcca 129 || ||||||||||| || ||||||||||| |||||||||||||| || |||||||||| Sbjct: 2879 ctccagaagcaagaatccggttccaagaagcccaagaagggagctgctgcacctcctcca 2938 Query: 130 tcagcagaaaacaagctcactgttggtctgatatatgtcaacgagcactatgatggatgg 189 || | ||||||||||| |||||||||||||| ||||| || || |||||| |||||||| Sbjct: 2939 tctgaggaaaacaagctgactgttggtctgatctatgttaatgaacactattatggatgg 2998 Query: 190 aaagaacaatgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcc 249 ||||| |||||| |||||||||| || || || ||||| |||||| | | ||||||||| Sbjct: 2999 aaagagcaatgtctgagggtgctccagtctaaatttgacagccaagctcggtcctttgcc 3058 Query: 250 cccgacgaggagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttc 309 || || |||||||||| ||||| | | ||| |||| ||||| | ||| | |||||| Sbjct: 3059 cctgatgaggagattactgaagcactgaagaattgctccatcgggcaggaaactaatttc 3118 Query: 310 aaacaagtacagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaac 369 |||||||| ||||||||||||||||||||||||| || || || ||||| || | || Sbjct: 3119 aaacaagtccagaagctctgcatgcctttcatcaagtcgaaaaaggatgaggccaagagt 3178 Query: 370 gttggtccccaggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggag 429 ||||| ||||| ||| ||||| |||||||||| ||||||||||| ||||| || |||||| Sbjct: 3179 gttgggccccatgctttaaatctgaagcttccatttggtgaaatgaatgttctcgaggag 3238 Query: 430 aacctagagctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcactt 489 || | ||| |||||| |||||| | || ||||| ||||| |||||| |||| || | Sbjct: 3239 aatttggagttgatcaagaggcaggtaggccttgaccatgtagaggtcttgtcagcttct 3298 Query: 490 gatggagctgctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgcct 549 |||| ||| ||||||| || ||||| |||| ||| || | ||||||| |||||| Sbjct: 3299 gatgaagcaactcgtgctaaggctggtgctcatgtttcaatgttggacaagaccccgcct 3358 Query: 550 tcccctggtgagccggttgcaatattcatgagcaagcaggagtttgaagtccag 603 || |||||||| || || ||||| ||||| ||||||||||||||||||| |||| Sbjct: 3359 tctcctggtgaaccagtagcaatcttcatcagcaagcaggagtttgaagcccag 3412
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 287 bits (145), Expect = 2e-74 Identities = 482/594 (81%), Gaps = 3/594 (0%) Strand = Plus / Minus Query: 13 cctactctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttg 72 ||||||||||| | ||| |||||||||||||||||||| || ||| | | |||||| || Sbjct: 12677981 cctactctaagaattgcaaacaaatatttacaggactctatagttaaattcaggaagctg 12677922 Query: 73 cttcagaagcaagagtctggttccaagaaacccaagaagggagccgc---acctcctcca 129 || ||||||||||| || ||||||||||| |||||||||||||| || |||||||||| Sbjct: 12677921 ctccagaagcaagaatccggttccaagaagcccaagaagggagctgctgcacctcctcca 12677862 Query: 130 tcagcagaaaacaagctcactgttggtctgatatatgtcaacgagcactatgatggatgg 189 || | ||||||||||| |||||||||||||| ||||| || || |||||| |||||||| Sbjct: 12677861 tctgaggaaaacaagctgactgttggtctgatctatgttaatgaacactattatggatgg 12677802 Query: 190 aaagaacaatgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcc 249 ||||| |||||| |||||||||| || || || ||||| |||||| | | ||||||||| Sbjct: 12677801 aaagagcaatgtctgagggtgctccagtctaaatttgacagccaagctcggtcctttgcc 12677742 Query: 250 cccgacgaggagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttc 309 || || |||||||||| ||||| | | ||| |||| ||||| | ||| | |||||| Sbjct: 12677741 cctgatgaggagattactgaagcactgaagaattgctccatcgggcaggaaactaatttc 12677682 Query: 310 aaacaagtacagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaac 369 |||||||| ||||||||||||||||||||||||| || || || ||||| || | || Sbjct: 12677681 aaacaagtccagaagctctgcatgcctttcatcaagtcgaaaaaggatgaggccaagagt 12677622 Query: 370 gttggtccccaggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggag 429 ||||| ||||| ||| ||||| |||||||||| ||||||||||| ||||| || |||||| Sbjct: 12677621 gttgggccccatgctttaaatctgaagcttccatttggtgaaatgaatgttctcgaggag 12677562 Query: 430 aacctagagctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcactt 489 || | ||| |||||| |||||| | || ||||| ||||| |||||| |||| || | Sbjct: 12677561 aatttggagttgatcaagaggcaggtaggccttgaccatgtagaggtcttgtcagcttct 12677502 Query: 490 gatggagctgctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgcct 549 |||| ||| ||||||| || ||||| |||| ||| || | ||||||| |||||| Sbjct: 12677501 gatgaagcaactcgtgctaaggctggtgctcatgtttcaatgttggacaagaccccgcct 12677442 Query: 550 tcccctggtgagccggttgcaatattcatgagcaagcaggagtttgaagtccag 603 || |||||||| || || ||||| ||||| ||||||||||||||||||| |||| Sbjct: 12677441 tctcctggtgaaccagtagcaatcttcatcagcaagcaggagtttgaagcccag 12677388 Score = 280 bits (141), Expect = 6e-72 Identities = 357/428 (83%), Gaps = 1/428 (0%) Strand = Plus / Plus Query: 19 ctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttgcttcag 78 ||||| | ||| ||||||||||||||||||||||| ||| | | |||||| |||| ||| Sbjct: 19184032 ctaagaattgctaacaaatatttacaggactccatagttaaattcaggaagctgctccag 19184091 Query: 79 aagcaagagtctggttccaagaaacccaagaagggagccgcacctcctccatcagcagaa 138 |||||||| ||||||||||||||||||||||||||| | |||||||||||||| | || Sbjct: 19184092 aagcaagaatctggttccaagaaacccaagaagggaactgcacctcctccatctgagcaa 19184151 Query: 139 aacaagctcactgttggtctgatatatgtcaacgagcactatgatggatggaaagaacaa 198 |||||||| |||||||||||| | || ||||| ||| ||||| ||||||||||||| ||| Sbjct: 19184152 aacaagctgactgttggtctggtctacgtcaatgagaactattatggatggaaagagcaa 19184211 Query: 199 tgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcccccgacgag 258 ||||||||||| || || || || |||||||||||| || | | ||||| || || ||| Sbjct: 19184212 tgtttgagggttctccagtctaaatttgatagccaagcacgtttgtttgctcctgatgag 19184271 Query: 259 gagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttcaaacaagta 318 |||||||| ||||| || | |||||||| ||||| | ||| | || ||||||||||| Sbjct: 19184272 gagattaatgaagcattgaagaactgctccatcggacaggaaactaacttcaaacaagtc 19184331 Query: 319 cagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaacgtt-ggtcc 377 ||||||||||||||||||||||||| || || |||||||| || |||| ||| || || Sbjct: 19184332 cagaagctctgcatgcctttcatcaagtcgaaaaaagatgaggcgaggagtgttggggcc 19184391 Query: 378 ccaggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggagaacctaga 437 ||| ||| | |||||||||||||||||||||||||| | ||| || |||||| || | || Sbjct: 19184392 ccacgctttgaatttgaagcttccttttggtgaaatgagtgttctcgaggaggacttgga 19184451 Query: 438 gctgatca 445 |||||||| Sbjct: 19184452 gctgatca 19184459 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 489 tgatggagctgctcgtgccaaagctggaaagcatgcttctctgctagacaaga 541 ||||| |||||||||||| |||||||| |||||| ||| |||| ||||||| Sbjct: 19184502 tgatgaagctgctcgtgctaaagctggcgtgcatgcctctatgctggacaaga 19184554
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 287 bits (145), Expect = 2e-74 Identities = 482/594 (81%), Gaps = 3/594 (0%) Strand = Plus / Minus Query: 13 cctactctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttg 72 ||||||||||| | ||| |||||||||||||||||||| || ||| | | |||||| || Sbjct: 143919 cctactctaagaattgcaaacaaatatttacaggactctatagttaaattcaggaagctg 143860 Query: 73 cttcagaagcaagagtctggttccaagaaacccaagaagggagccgc---acctcctcca 129 || ||||||||||| || ||||||||||| |||||||||||||| || |||||||||| Sbjct: 143859 ctccagaagcaagaatccggttccaagaagcccaagaagggagctgctgcacctcctcca 143800 Query: 130 tcagcagaaaacaagctcactgttggtctgatatatgtcaacgagcactatgatggatgg 189 || | ||||||||||| |||||||||||||| ||||| || || |||||| |||||||| Sbjct: 143799 tctgaggaaaacaagctgactgttggtctgatctatgttaatgaacactattatggatgg 143740 Query: 190 aaagaacaatgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcc 249 ||||| |||||| |||||||||| || || || ||||| |||||| | | ||||||||| Sbjct: 143739 aaagagcaatgtctgagggtgctccagtctaaatttgacagccaagctcggtcctttgcc 143680 Query: 250 cccgacgaggagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttc 309 || || |||||||||| ||||| | | ||| |||| ||||| | ||| | |||||| Sbjct: 143679 cctgatgaggagattactgaagcactgaagaattgctccatcgggcaggaaactaatttc 143620 Query: 310 aaacaagtacagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaac 369 |||||||| ||||||||||||||||||||||||| || || || ||||| || | || Sbjct: 143619 aaacaagtccagaagctctgcatgcctttcatcaagtcgaaaaaggatgaggccaagagt 143560 Query: 370 gttggtccccaggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggag 429 ||||| ||||| ||| ||||| |||||||||| ||||||||||| ||||| || |||||| Sbjct: 143559 gttgggccccatgctttaaatctgaagcttccatttggtgaaatgaatgttctcgaggag 143500 Query: 430 aacctagagctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcactt 489 || | ||| |||||| |||||| | || ||||| ||||| |||||| |||| || | Sbjct: 143499 aatttggagttgatcaagaggcaggtaggccttgaccatgtagaggtcttgtcagcttct 143440 Query: 490 gatggagctgctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgcct 549 |||| ||| ||||||| || ||||| |||| ||| || | ||||||| |||||| Sbjct: 143439 gatgaagcaactcgtgctaaggctggtgctcatgtttcaatgttggacaagaccccgcct 143380 Query: 550 tcccctggtgagccggttgcaatattcatgagcaagcaggagtttgaagtccag 603 || |||||||| || || ||||| ||||| ||||||||||||||||||| |||| Sbjct: 143379 tctcctggtgaaccagtagcaatcttcatcagcaagcaggagtttgaagcccag 143326
>dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D12, full insert sequence Length = 3772 Score = 287 bits (145), Expect = 2e-74 Identities = 482/594 (81%), Gaps = 3/594 (0%) Strand = Plus / Plus Query: 13 cctactctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttg 72 ||||||||||| | ||| |||||||||||||||||||| || ||| | | |||||| || Sbjct: 2819 cctactctaagaattgcaaacaaatatttacaggactctatagttaaattcaggaagctg 2878 Query: 73 cttcagaagcaagagtctggttccaagaaacccaagaagggagccgc---acctcctcca 129 || ||||||||||| || ||||||||||| |||||||||||||| || |||||||||| Sbjct: 2879 ctccagaagcaagaatccggttccaagaagcccaagaagggagctgctgcacctcctcca 2938 Query: 130 tcagcagaaaacaagctcactgttggtctgatatatgtcaacgagcactatgatggatgg 189 || | ||||||||||| |||||||||||||| ||||| || || |||||| |||||||| Sbjct: 2939 tctgaggaaaacaagctgactgttggtctgatctatgttaatgaacactattatggatgg 2998 Query: 190 aaagaacaatgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcc 249 ||||| |||||| |||||||||| || || || ||||| |||||| | | ||||||||| Sbjct: 2999 aaagagcaatgtctgagggtgctccagtctaaatttgacagccaagctcggtcctttgcc 3058 Query: 250 cccgacgaggagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttc 309 || || |||||||||| ||||| | | ||| |||| ||||| | ||| | |||||| Sbjct: 3059 cctgatgaggagattactgaagcactgaagaattgctccatcgggcaggaaactaatttc 3118 Query: 310 aaacaagtacagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaac 369 |||||||| ||||||||||||||||||||||||| || || || ||||| || | || Sbjct: 3119 aaacaagtccagaagctctgcatgcctttcatcaagtcgaaaaaggatgaggccaagagt 3178 Query: 370 gttggtccccaggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggag 429 ||||| ||||| ||| ||||| |||||||||| ||||||||||| ||||| || |||||| Sbjct: 3179 gttgggccccatgctttaaatctgaagcttccatttggtgaaatgaatgttctcgaggag 3238 Query: 430 aacctagagctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcactt 489 || | ||| |||||| |||||| | || ||||| ||||| |||||| |||| || | Sbjct: 3239 aatttggagttgatcaagaggcaggtaggccttgaccatgtagaggtcttgtcagcttct 3298 Query: 490 gatggagctgctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgcct 549 |||| ||| ||||||| || ||||| |||| ||| || | ||||||| |||||| Sbjct: 3299 gatgaagcaactcgtgctaaggctggtgctcatgtttcaatgttggacaagaccccgcct 3358 Query: 550 tcccctggtgagccggttgcaatattcatgagcaagcaggagtttgaagtccag 603 || |||||||| || || ||||| ||||| ||||||||||||||||||| |||| Sbjct: 3359 tctcctggtgaaccagtagcaatcttcatcagcaagcaggagtttgaagcccag 3412
>gb|AY107623.1| Zea mays PCO144466 mRNA sequence Length = 2543 Score = 93.7 bits (47), Expect = 7e-16 Identities = 142/173 (82%), Gaps = 3/173 (1%) Strand = Plus / Plus Query: 43 caggactccattgttttaatgaggaagttgcttcagaagcaagagtctggttccaagaaa 102 ||||| ||||| ||||| |||||||| ||||||||||||||||||||||||| ||||| Sbjct: 1738 caggattccatagttttgatgaggaaactgcttcagaagcaagagtctggttctaagaag 1797 Query: 103 cccaagaagggagccgcac---ctcctccatcagcagaaaacaagctcactgttggtctg 159 || ||||||||||| |||| | ||||| || | ||||| ||| | | ||||||| Sbjct: 1798 cctaagaagggagctgcaccggcacctccgtccgaggaaaagaagatgagcattggtctc 1857 Query: 160 atatatgtcaacgagcactatgatggatggaaagaacaatgtttgagggtgct 212 |||||||| ||||||||||| |||||||||||| || || ||||||||||| Sbjct: 1858 atatatgtgaacgagcactactctggatggaaagagcagtgcttgagggtgct 1910
>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04, complete sequence Length = 95383 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 151 gttggtctgatatatgtcaacgagcactatgatggatggaaagaacaatgtttgag 206 |||||||| |||||||| || || ||||||||||| |||||||| ||||||||||| Sbjct: 74150 gttggtctaatatatgtgaatgaacactatgatggctggaaagagcaatgtttgag 74205 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 331 atgcctttcatcaggttcaagaaagatgaagca 363 ||||||||||| | ||||||||||||||||||| Sbjct: 74332 atgcctttcattaagttcaagaaagatgaagca 74364
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 151 gttggtctgatatatgtcaacgagcactatgatggatggaaagaacaatgtttgag 206 |||||||| |||||||| || || ||||||||||| |||||||| ||||||||||| Sbjct: 8495880 gttggtctaatatatgtgaatgaacactatgatggctggaaagagcaatgtttgag 8495935 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 331 atgcctttcatcaggttcaagaaagatgaagca 363 ||||||||||| | ||||||||||||||||||| Sbjct: 8496062 atgcctttcattaagttcaagaaagatgaagca 8496094
>dbj|AK120403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088K21, full insert sequence Length = 5000 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 151 gttggtctgatatatgtcaacgagcactatgatggatggaaagaacaatgtttgag 206 |||||||| |||||||| || || ||||||||||| |||||||| ||||||||||| Sbjct: 4228 gttggtctaatatatgtgaatgaacactatgatggctggaaagagcaatgtttgag 4283 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 331 atgcctttcatcaggttcaagaaagatgaagca 363 ||||||||||| | ||||||||||||||||||| Sbjct: 4410 atgcctttcattaagttcaagaaagatgaagca 4442
>emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chromosome 4, complete sequence Length = 221208 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 180 tgatggatggaaagaacaatgtt 202 ||||||||||||||||||||||| Sbjct: 131761 tgatggatggaaagaacaatgtt 131783
>ref|XM_364839.1| Magnaporthe grisea 70-15 hypothetical protein (MG09684.4) partial mRNA Length = 6480 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 ctcctccatcagcagaaaacaa 143 |||||||||||||||||||||| Sbjct: 5514 ctcctccatcagcagaaaacaa 5493
>gb|DQ493952.1| Magnaporthe grisea 70-15 clone 41N21 telomere region, partial sequence Length = 43132 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 ctcctccatcagcagaaaacaa 143 |||||||||||||||||||||| Sbjct: 14416 ctcctccatcagcagaaaacaa 14437
>gb|AC101902.9| Mus musculus chromosome 1, clone RP24-147M23, complete sequence Length = 223784 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 aagagtctggttccaagaaacc 104 |||||||||||||||||||||| Sbjct: 13871 aagagtctggttccaagaaacc 13892
>gb|AC126802.4| Mus musculus BAC clone RP24-543J12 from chromosome 5, complete sequence Length = 154808 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 60 aatgaggaagttgcttcagaag 81 |||||||||||||||||||||| Sbjct: 111266 aatgaggaagttgcttcagaag 111287
>gb|AC132258.3| Mus musculus BAC clone RP24-361F13 from 1, complete sequence Length = 130493 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 aagagtctggttccaagaaacc 104 |||||||||||||||||||||| Sbjct: 102032 aagagtctggttccaagaaacc 102053
>ref|XM_723538.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07685) partial mRNA Length = 534 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 gcatgcctttcatcaggttca 349 ||||||||||||||||||||| Sbjct: 473 gcatgcctttcatcaggttca 453
>gb|AC146775.8| Medicago truncatula clone mth2-95g14, complete sequence Length = 139593 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 actccattgttttaatgagga 67 ||||||||||||||||||||| Sbjct: 95725 actccattgttttaatgagga 95705
>emb|AL138767.15| Human DNA sequence from clone RP11-57C13 on chromosome 10 Contains the 3' end of the MINPP gene for multiple inositol polyphosphate histidine phosphatase 1, three novel genes, a ribosomal protein S26 (RPS26) pseudogene, the 5' end of the PAPSS2 gene for 3'-phosphoadenosine 5'-phosphosulfate synthase 2 and a CpG island, complete sequence Length = 111645 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 601 cagatttaagcttcagattaa 621 ||||||||||||||||||||| Sbjct: 43716 cagatttaagcttcagattaa 43696
>gb|AC113613.4| Homo sapiens BAC clone RP11-511I21 from 4, complete sequence Length = 86568 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 aacaaatatttacaggactcc 51 ||||||||||||||||||||| Sbjct: 54093 aacaaatatttacaggactcc 54073
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 gcatgcctttcatcaggttca 349 ||||||||||||||||||||| Sbjct: 1423964 gcatgcctttcatcaggttca 1423944
>gb|AC115594.2| Dictyostelium discoideum chromosome 2 map 4071862-4101005 strain AX4, complete sequence Length = 29143 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 aatcaaatttcaaacaagtac 319 ||||||||||||||||||||| Sbjct: 8840 aatcaaatttcaaacaagtac 8820
>gb|AC167669.1| Mus musculus BAC clone RP24-138L8 from chromosome 13, complete sequence Length = 202905 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 aatgaggaagttgcttcagaa 80 ||||||||||||||||||||| Sbjct: 186282 aatgaggaagttgcttcagaa 186302
>gb|AC015445.3|F2J10 Sequence of BAC F2J10 from Arabidopsis thaliana chromosome 1, complete sequence Length = 91720 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 379 caggctctaaatttgaagcttccttttgg 407 |||||||||||||||| ||| |||||||| Sbjct: 6884 caggctctaaatttgaggctgccttttgg 6856
>gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, complete sequence Length = 248750 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 aagctctgcatgcctttcatc 342 ||||||||||||||||||||| Sbjct: 147864 aagctctgcatgcctttcatc 147844
>ref|NM_025807.1| Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 9 (Slc16a9), mRNA Length = 3565 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaacaatgtttgagggtg 210 |||||||||||||||||||| Sbjct: 2690 aagaacaatgtttgagggtg 2709
>gb|BC034205.1| Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 9, mRNA (cDNA clone IMAGE:4987055), containing frame-shift errors Length = 2750 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaacaatgtttgagggtg 210 |||||||||||||||||||| Sbjct: 2645 aagaacaatgtttgagggtg 2664
>gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section 6 of 9 of the complete sequence Length = 250421 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 ccttttggtgaaattaatgt 419 |||||||||||||||||||| Sbjct: 160828 ccttttggtgaaattaatgt 160847
>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence Length = 182534 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agagtctggttccaagaaac 103 |||||||||||||||||||| Sbjct: 41011 agagtctggttccaagaaac 40992
>gb|AC134414.12| Mus musculus chromosome 15, clone RP24-70H12, complete sequence Length = 195834 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 atggaaagaacaatgtttga 205 |||||||||||||||||||| Sbjct: 180371 atggaaagaacaatgtttga 180390
>ref|XM_417954.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 1200009H11 (LOC419818), mRNA Length = 1413 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 aatcttctcacagaactttg 639 |||||||||||||||||||| Sbjct: 531 aatcttctcacagaactttg 512
>gb|AC127348.4| Mus musculus BAC clone RP23-57D10 from chromosome 7, complete sequence Length = 229190 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 tggatggaaagaacaatgtt 202 |||||||||||||||||||| Sbjct: 35660 tggatggaaagaacaatgtt 35679
>gb|AC123531.4| Mus musculus BAC clone RP24-289C11 from chromosome 15, complete sequence Length = 165766 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 atggaaagaacaatgtttga 205 |||||||||||||||||||| Sbjct: 88950 atggaaagaacaatgtttga 88931
>gb|AC158776.5| Mus musculus chromosome 15, clone RP23-261G10, complete sequence Length = 192769 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agagtctggttccaagaaac 103 |||||||||||||||||||| Sbjct: 93551 agagtctggttccaagaaac 93532
>gb|AY517485.1| Mus musculus dendritic cell-specific transmembrane protein variant 2 mRNA, complete cds, alternatively spliced Length = 1685 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agagtctggttccaagaaac 103 |||||||||||||||||||| Sbjct: 562 agagtctggttccaagaaac 543
>gb|AY517483.1| Mus musculus dendritic cell-specific transmembrane protein mRNA, complete cds, alternatively spliced Length = 1994 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agagtctggttccaagaaac 103 |||||||||||||||||||| Sbjct: 562 agagtctggttccaagaaac 543
>ref|XM_749904.1| Aspergillus fumigatus Af293 transcription initiation factor TFIID subunit 12 (Afu3g06090) partial mRNA Length = 1845 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 gcatgcctttcatcaggttc 348 |||||||||||||||||||| Sbjct: 241 gcatgcctttcatcaggttc 222
>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence Length = 242112 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aagaacaatgtttgagggtg 210 |||||||||||||||||||| Sbjct: 99638 aagaacaatgtttgagggtg 99619
>gb|AC124193.2| Mus musculus BAC clone RP23-277F3 from 16, complete sequence Length = 190347 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 gaagctctgcatgcctttcatcag 344 |||||| ||||||||||||||||| Sbjct: 15334 gaagctgtgcatgcctttcatcag 15357
>gb|AC133157.1| Mus musculus BAC clone RP24-472D8 from 2, complete sequence Length = 172460 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 tgatggatggaaagaacaatgttt 203 |||||||||||| ||||||||||| Sbjct: 145852 tgatggatggaaggaacaatgttt 145829
>gb|AC158567.3| Mus musculus chromosome 15, clone RP24-93F2, complete sequence Length = 188718 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agagtctggttccaagaaac 103 |||||||||||||||||||| Sbjct: 18171 agagtctggttccaagaaac 18152
>gb|AC161805.4| Mus musculus chromosome 1, clone RP24-325N3, complete sequence Length = 192649 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 tgatggatggaaagaacaatgttt 203 |||||||||||| ||||||||||| Sbjct: 146470 tgatggatggaaggaacaatgttt 146493
>emb|BX957346.14| Zebrafish DNA sequence from clone CH211-117K16 in linkage group 25, complete sequence Length = 149598 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 gatggatggaaagaacaatg 200 |||||||||||||||||||| Sbjct: 78962 gatggatggaaagaacaatg 78981
>dbj|AK154384.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630025L15 product:transmembrane 7 superfamily member 4, full insert sequence Length = 1990 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agagtctggttccaagaaac 103 |||||||||||||||||||| Sbjct: 562 agagtctggttccaagaaac 543
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 ttggtgaaattaatgtgctt 423 |||||||||||||||||||| Sbjct: 1596116 ttggtgaaattaatgtgctt 1596135
>emb|BX571973.15| Zebrafish DNA sequence from clone DKEY-254A11 in linkage group 22, complete sequence Length = 214325 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gatggatggaaagaacaatg 200 |||||||||||||||||||| Sbjct: 109969 gatggatggaaagaacaatg 109950
>dbj|AK004599.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200004H04 product:hypothetical protein, full insert sequence Length = 2927 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaacaatgtttgagggtg 210 |||||||||||||||||||| Sbjct: 2869 aagaacaatgtttgagggtg 2888
>dbj|AK004556.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200003C15 product:hypothetical protein, full insert sequence Length = 3565 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaacaatgtttgagggtg 210 |||||||||||||||||||| Sbjct: 2690 aagaacaatgtttgagggtg 2709
>dbj|AK014697.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833414I07 product:similar to DC-SPECIFIC TRANSMEMBRANE PROTEIN (PUTATIVE IL-4 INDUCED PROTEIN FIND) [Homo sapiens], full insert sequence Length = 1685 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agagtctggttccaagaaac 103 |||||||||||||||||||| Sbjct: 562 agagtctggttccaagaaac 543
>emb|CR338830.1| Gallus gallus finished cDNA, clone ChEST974l3 Length = 887 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 aatcttctcacagaactttg 639 |||||||||||||||||||| Sbjct: 425 aatcttctcacagaactttg 406
>dbj|AB109561.1| Mus musculus DCSTAMP mRNA for differentially spliced dendritic cell-specific transmembrane protein, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agagtctggttccaagaaac 103 |||||||||||||||||||| Sbjct: 561 agagtctggttccaagaaac 542
>dbj|AB109560.1| Mus musculus DCSTAMP mRNA for dendritic cell-specific transmembrane protein, complete cds Length = 1993 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agagtctggttccaagaaac 103 |||||||||||||||||||| Sbjct: 561 agagtctggttccaagaaac 542
>emb|AL590390.5| Mouse DNA sequence from clone RP23-294H14 on chromosome X, complete sequence Length = 114156 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 atgatggatggaaagaacaatgtt 202 ||||||||||||| |||||||||| Sbjct: 80068 atgatggatggaaggaacaatgtt 80045
>emb|AL935306.6| Zebrafish DNA sequence from clone DKEY-65O9, complete sequence Length = 207183 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aaatatttacaggactccat 53 |||||||||||||||||||| Sbjct: 117520 aaatatttacaggactccat 117539
>gb|AC005615.1|AC005615 Homo sapines chromosome 19, cosmid R28058, complete sequence Length = 42619 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ccatcagcagaaaacaagct 146 |||||||||||||||||||| Sbjct: 24055 ccatcagcagaaaacaagct 24074
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ttggtgaaattaatgtgctt 423 |||||||||||||||||||| Sbjct: 1207587 ttggtgaaattaatgtgctt 1207568
>gb|AC160645.2| Gallus gallus BAC clone CH261-21L11 from chromosome unknown, complete sequence Length = 223748 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 agcaggagtttgaagtccag 603 |||||||||||||||||||| Sbjct: 188230 agcaggagtttgaagtccag 188249
>ref|NM_029422.1| Mus musculus transmembrane 7 superfamily member 4 (Tm7sf4), mRNA Length = 1994 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agagtctggttccaagaaac 103 |||||||||||||||||||| Sbjct: 562 agagtctggttccaagaaac 543
>gb|AC149611.6| Mus musculus BAC clone RP23-157P4 from 7, complete sequence Length = 217353 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 tggatggaaagaacaatgtt 202 |||||||||||||||||||| Sbjct: 89257 tggatggaaagaacaatgtt 89238
>emb|AL732399.11| Mouse DNA sequence from clone RP23-311A22 on chromosome X, complete sequence Length = 198033 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 tggatggaaagaacaatgtt 202 |||||||||||||||||||| Sbjct: 155553 tggatggaaagaacaatgtt 155534
>emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chromosome 11, complete sequence Length = 235868 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ttgttttaatgaggaagttg 72 |||||||||||||||||||| Sbjct: 37039 ttgttttaatgaggaagttg 37058 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,825,996 Number of Sequences: 3902068 Number of extensions: 6825996 Number of successful extensions: 124366 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 124099 Number of HSP's gapped (non-prelim): 252 length of query: 674 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 651 effective length of database: 17,143,297,704 effective search space: 11160286805304 effective search space used: 11160286805304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)