ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags24e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 371 2e-99
2dbj|AK099796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 371 2e-99
3dbj|AK062108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 371 2e-99
4dbj|AK100624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 1e-94
5ref|XM_450769.1| Oryza sativa (japonica cultivar-group), mRNA 287 2e-74
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 287 2e-74
7dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic D... 287 2e-74
8dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA clon... 287 2e-74
9gb|AY107623.1| Zea mays PCO144466 mRNA sequence 94 7e-16
10gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome... 64 6e-07
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
12dbj|AK120403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
13emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chrom... 46 0.15
14ref|XM_364839.1| Magnaporthe grisea 70-15 hypothetical protein (... 44 0.59
15gb|DQ493952.1| Magnaporthe grisea 70-15 clone 41N21 telomere reg... 44 0.59
16gb|AC101902.9| Mus musculus chromosome 1, clone RP24-147M23, com... 44 0.59
17gb|AC126802.4| Mus musculus BAC clone RP24-543J12 from chromosom... 44 0.59
18gb|AC132258.3| Mus musculus BAC clone RP24-361F13 from 1, comple... 44 0.59
19ref|XM_723538.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 42 2.3
20gb|AC146775.8| Medicago truncatula clone mth2-95g14, complete se... 42 2.3
21emb|AL138767.15| Human DNA sequence from clone RP11-57C13 on chr... 42 2.3
22gb|AC113613.4| Homo sapiens BAC clone RP11-511I21 from 4, comple... 42 2.3
23gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 42 2.3
24gb|AC115594.2| Dictyostelium discoideum chromosome 2 map 4071862... 42 2.3
25gb|AC167669.1| Mus musculus BAC clone RP24-138L8 from chromosome... 42 2.3
26gb|AC015445.3|F2J10 Sequence of BAC F2J10 from Arabidopsis thali... 42 2.3
27gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, co... 42 2.3
28ref|NM_025807.1| Mus musculus solute carrier family 16 (monocarb... 40 9.2
29gb|BC034205.1| Mus musculus solute carrier family 16 (monocarbox... 40 9.2
30gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section ... 40 9.2
31gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, c... 40 9.2
32gb|AC134414.12| Mus musculus chromosome 15, clone RP24-70H12, co... 40 9.2
33ref|XM_417954.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ... 40 9.2
34gb|AC127348.4| Mus musculus BAC clone RP23-57D10 from chromosome... 40 9.2
35gb|AC123531.4| Mus musculus BAC clone RP24-289C11 from chromosom... 40 9.2
36gb|AC158776.5| Mus musculus chromosome 15, clone RP23-261G10, co... 40 9.2
37gb|AY517485.1| Mus musculus dendritic cell-specific transmembran... 40 9.2
38gb|AY517483.1| Mus musculus dendritic cell-specific transmembran... 40 9.2
39ref|XM_749904.1| Aspergillus fumigatus Af293 transcription initi... 40 9.2
40gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complet... 40 9.2
41gb|AC124193.2| Mus musculus BAC clone RP23-277F3 from 16, comple... 40 9.2
42gb|AC133157.1| Mus musculus BAC clone RP24-472D8 from 2, complet... 40 9.2
43gb|AC158567.3| Mus musculus chromosome 15, clone RP24-93F2, comp... 40 9.2
44gb|AC161805.4| Mus musculus chromosome 1, clone RP24-325N3, comp... 40 9.2
45emb|BX957346.14| Zebrafish DNA sequence from clone CH211-117K16 ... 40 9.2
46dbj|AK154384.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 9.2
47gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 40 9.2
48emb|BX571973.15| Zebrafish DNA sequence from clone DKEY-254A11 i... 40 9.2
49dbj|AK004599.1| Mus musculus adult male lung cDNA, RIKEN full-le... 40 9.2
50dbj|AK004556.1| Mus musculus adult male lung cDNA, RIKEN full-le... 40 9.2
51dbj|AK014697.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 40 9.2
52emb|CR338830.1| Gallus gallus finished cDNA, clone ChEST974l3 40 9.2
53dbj|AB109561.1| Mus musculus DCSTAMP mRNA for differentially spl... 40 9.2
54dbj|AB109560.1| Mus musculus DCSTAMP mRNA for dendritic cell-spe... 40 9.2
55emb|AL590390.5| Mouse DNA sequence from clone RP23-294H14 on chr... 40 9.2
56emb|AL935306.6| Zebrafish DNA sequence from clone DKEY-65O9, com... 40 9.2
57gb|AC005615.1|AC005615 Homo sapines chromosome 19, cosmid R28058... 40 9.2
58gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome 40 9.2
59gb|AC160645.2| Gallus gallus BAC clone CH261-21L11 from chromoso... 40 9.2
60ref|NM_029422.1| Mus musculus transmembrane 7 superfamily member... 40 9.2
61gb|AC149611.6| Mus musculus BAC clone RP23-157P4 from 7, complet... 40 9.2
62emb|AL732399.11| Mouse DNA sequence from clone RP23-311A22 on ch... 40 9.2
63emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chro... 40 9.2

>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBb0004A05, complete sequence
          Length = 157913

 Score =  371 bits (187), Expect = 2e-99
 Identities = 471/566 (83%)
 Strand = Plus / Plus

                                                                          
Query: 19     ctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttgcttcag 78
              ||||| | ||| ||||||||||||||||||||||| |||  | | |||||| |||| |||
Sbjct: 114963 ctaagaattgctaacaaatatttacaggactccatagttaaattcaggaagctgctccag 115022

                                                                          
Query: 79     aagcaagagtctggttccaagaaacccaagaagggagccgcacctcctccatcagcagaa 138
              |||||||| ||||||||||||||||||||||||||| | |||||||||||||| |   ||
Sbjct: 115023 aagcaagaatctggttccaagaaacccaagaagggaactgcacctcctccatctgagcaa 115082

                                                                          
Query: 139    aacaagctcactgttggtctgatatatgtcaacgagcactatgatggatggaaagaacaa 198
              |||||||| |||||||||||| | || ||||| ||| ||||| ||||||||||||| |||
Sbjct: 115083 aacaagctgactgttggtctggtctacgtcaatgagaactattatggatggaaagagcaa 115142

                                                                          
Query: 199    tgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcccccgacgag 258
              ||||||||||| || || || || |||||||||||| || | |  ||||| || || |||
Sbjct: 115143 tgtttgagggttctccagtctaaatttgatagccaagcacgtttgtttgctcctgatgag 115202

                                                                          
Query: 259    gagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttcaaacaagta 318
              |||||||| ||||| || | |||||||| |||||  |  ||| | || ||||||||||| 
Sbjct: 115203 gagattaatgaagcattgaagaactgctccatcggacaggaaactaacttcaaacaagtc 115262

                                                                          
Query: 319    cagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaacgttggtccc 378
              ||||||||||||||||||||||||| ||  || |||||||| || ||||  ||||| |||
Sbjct: 115263 cagaagctctgcatgcctttcatcaagtcgaaaaaagatgaggcgaggagtgttgggccc 115322

                                                                          
Query: 379    caggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggagaacctagag 438
              || ||| | |||||||||||||||||||||||||| | ||| || ||||||||| | |||
Sbjct: 115323 cacgctttgaatttgaagcttccttttggtgaaatgagtgttctcgaggagaacttggag 115382

                                                                          
Query: 439    ctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcacttgatggagct 498
              |||||||  |||||| | || ||||| ||||  ||||||||||| ||   |||||  |||
Sbjct: 115383 ctgatcaagaggcaggtaggccttgaacatgcagaggtcctgtctgcttctgatgaggct 115442

                                                                          
Query: 499    gctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgccttcccctggt 558
              |||||||| ||||||||   |||||||||| |||| |||||||  |||||||| ||||||
Sbjct: 115443 gctcgtgctaaagctggcgtgcatgcttctatgctggacaagaccccgccttctcctggt 115502

                                        
Query: 559    gagccggttgcaatattcatgagcaa 584
              ||||| || ||||| |||||||||||
Sbjct: 115503 gagccagtagcaatcttcatgagcaa 115528



to top

>dbj|AK099796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097H06, full
            insert sequence
          Length = 3673

 Score =  371 bits (187), Expect = 2e-99
 Identities = 471/566 (83%)
 Strand = Plus / Plus

                                                                        
Query: 19   ctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttgcttcag 78
            ||||| | ||| ||||||||||||||||||||||| |||  | | |||||| |||| |||
Sbjct: 2837 ctaagaattgctaacaaatatttacaggactccatagttaaattcaggaagctgctccag 2896

                                                                        
Query: 79   aagcaagagtctggttccaagaaacccaagaagggagccgcacctcctccatcagcagaa 138
            |||||||| ||||||||||||||||||||||||||| | |||||||||||||| |   ||
Sbjct: 2897 aagcaagaatctggttccaagaaacccaagaagggaactgcacctcctccatctgagcaa 2956

                                                                        
Query: 139  aacaagctcactgttggtctgatatatgtcaacgagcactatgatggatggaaagaacaa 198
            |||||||| |||||||||||| | || ||||| ||| ||||| ||||||||||||| |||
Sbjct: 2957 aacaagctgactgttggtctggtctacgtcaatgagaactattatggatggaaagagcaa 3016

                                                                        
Query: 199  tgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcccccgacgag 258
            ||||||||||| || || || || |||||||||||| || | |  ||||| || || |||
Sbjct: 3017 tgtttgagggttctccagtctaaatttgatagccaagcacgtttgtttgctcctgatgag 3076

                                                                        
Query: 259  gagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttcaaacaagta 318
            |||||||| ||||| || | |||||||| |||||  |  ||| | || ||||||||||| 
Sbjct: 3077 gagattaatgaagcattgaagaactgctccatcggacaggaaactaacttcaaacaagtc 3136

                                                                        
Query: 319  cagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaacgttggtccc 378
            ||||||||||||||||||||||||| ||  || |||||||| || ||||  ||||| |||
Sbjct: 3137 cagaagctctgcatgcctttcatcaagtcgaaaaaagatgaggcgaggagtgttgggccc 3196

                                                                        
Query: 379  caggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggagaacctagag 438
            || ||| | |||||||||||||||||||||||||| | ||| || ||||||||| | |||
Sbjct: 3197 cacgctttgaatttgaagcttccttttggtgaaatgagtgttctcgaggagaacttggag 3256

                                                                        
Query: 439  ctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcacttgatggagct 498
            |||||||  |||||| | || ||||| ||||  ||||||||||| ||   |||||  |||
Sbjct: 3257 ctgatcaagaggcaggtaggccttgaacatgcagaggtcctgtctgcttctgatgaggct 3316

                                                                        
Query: 499  gctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgccttcccctggt 558
            |||||||| ||||||||   |||||||||| |||| |||||||  |||||||| ||||||
Sbjct: 3317 gctcgtgctaaagctggcgtgcatgcttctatgctggacaagaccccgccttctcctggt 3376

                                      
Query: 559  gagccggttgcaatattcatgagcaa 584
            ||||| || ||||| |||||||||||
Sbjct: 3377 gagccagtagcaatcttcatgagcaa 3402



to top

>dbj|AK062108.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B04, full
            insert sequence
          Length = 1434

 Score =  371 bits (187), Expect = 2e-99
 Identities = 471/566 (83%)
 Strand = Plus / Plus

                                                                        
Query: 19   ctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttgcttcag 78
            ||||| | ||| ||||||||||||||||||||||| |||  | | |||||| |||| |||
Sbjct: 617  ctaagaattgctaacaaatatttacaggactccatagttaaattcaggaagctgctccag 676

                                                                        
Query: 79   aagcaagagtctggttccaagaaacccaagaagggagccgcacctcctccatcagcagaa 138
            |||||||| ||||||||||||||||||||||||||| | |||||||||||||| |   ||
Sbjct: 677  aagcaagaatctggttccaagaaacccaagaagggaactgcacctcctccatctgagcaa 736

                                                                        
Query: 139  aacaagctcactgttggtctgatatatgtcaacgagcactatgatggatggaaagaacaa 198
            |||||||| |||||||||||| | || ||||| ||| ||||| ||||||||||||| |||
Sbjct: 737  aacaagctgactgttggtctggtctacgtcaatgagaactattatggatggaaagagcaa 796

                                                                        
Query: 199  tgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcccccgacgag 258
            ||||||||||| || || || || |||||||||||| || | |  ||||| || || |||
Sbjct: 797  tgtttgagggttctccagtctaaatttgatagccaagcacgtttgtttgctcctgatgag 856

                                                                        
Query: 259  gagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttcaaacaagta 318
            |||||||| ||||| || | |||||||| |||||  |  ||| | || ||||||||||| 
Sbjct: 857  gagattaatgaagcattgaagaactgctccatcggacaggaaactaacttcaaacaagtc 916

                                                                        
Query: 319  cagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaacgttggtccc 378
            ||||||||||||||||||||||||| ||  || |||||||| || ||||  ||||| |||
Sbjct: 917  cagaagctctgcatgcctttcatcaagtcgaaaaaagatgaggcgaggagtgttgggccc 976

                                                                        
Query: 379  caggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggagaacctagag 438
            || ||| | |||||||||||||||||||||||||| | ||| || ||||||||| | |||
Sbjct: 977  cacgctttgaatttgaagcttccttttggtgaaatgagtgttctcgaggagaacttggag 1036

                                                                        
Query: 439  ctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcacttgatggagct 498
            |||||||  |||||| | || ||||| ||||  ||||||||||| ||   |||||  |||
Sbjct: 1037 ctgatcaagaggcaggtaggccttgaacatgcagaggtcctgtctgcttctgatgaggct 1096

                                                                        
Query: 499  gctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgccttcccctggt 558
            |||||||| ||||||||   |||||||||| |||| |||||||  |||||||| ||||||
Sbjct: 1097 gctcgtgctaaagctggcgtgcatgcttctatgctggacaagaccccgccttctcctggt 1156

                                      
Query: 559  gagccggttgcaatattcatgagcaa 584
            ||||| || ||||| |||||||||||
Sbjct: 1157 gagccagtagcaatcttcatgagcaa 1182



to top

>dbj|AK100624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108I24, full
            insert sequence
          Length = 3669

 Score =  355 bits (179), Expect = 1e-94
 Identities = 469/566 (82%)
 Strand = Plus / Plus

                                                                        
Query: 19   ctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttgcttcag 78
            ||||| | ||| ||||||||||||||||||||||| |||  | | |||||| |||| |||
Sbjct: 2837 ctaagaattgctaacaaatatttacaggactccatagttaaattcaggaagctgctccag 2896

                                                                        
Query: 79   aagcaagagtctggttccaagaaacccaagaagggagccgcacctcctccatcagcagaa 138
            |||||||| ||||||||||||||||||||||||||| | |||||||||||||| |   ||
Sbjct: 2897 aagcaagaatctggttccaagaaacccaagaagggaactgcacctcctccatctgagcaa 2956

                                                                        
Query: 139  aacaagctcactgttggtctgatatatgtcaacgagcactatgatggatggaaagaacaa 198
            |||||||| |||||||||||| | || ||||| ||| ||||| ||||||||||||| |||
Sbjct: 2957 aacaagctgactgttggtctggtctacgtcaatgagaactattatggatggaaagagcaa 3016

                                                                        
Query: 199  tgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcccccgacgag 258
            ||||||||||| || || || || |||||||||||| || | |  |||||  | || |||
Sbjct: 3017 tgtttgagggttctccagtctaaatttgatagccaagcacgtttgtttgctactgatgag 3076

                                                                        
Query: 259  gagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttcaaacaagta 318
            |||||||| ||||| || | |||||||| |||||  |  ||| | || ||||||| ||| 
Sbjct: 3077 gagattaatgaagcattgaagaactgctccatcggacaggaaactaacttcaaacgagtc 3136

                                                                        
Query: 319  cagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaacgttggtccc 378
            ||||||||||||||||||||||||| ||  || |||||||| || ||||  ||||| |||
Sbjct: 3137 cagaagctctgcatgcctttcatcaagtcgaaaaaagatgaggcgaggagtgttgggccc 3196

                                                                        
Query: 379  caggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggagaacctagag 438
            || ||| | |||||||||||||||||||||||||| | ||| || ||||||||| | |||
Sbjct: 3197 cacgctttgaatttgaagcttccttttggtgaaatgagtgttctcgaggagaacttggag 3256

                                                                        
Query: 439  ctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcacttgatggagct 498
            |||||||  |||||| | || ||||| ||||  ||||||||||| ||   |||||  |||
Sbjct: 3257 ctgatcaagaggcaggtaggccttgaacatgcagaggtcctgtctgcttctgatgaggct 3316

                                                                        
Query: 499  gctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgccttcccctggt 558
            |||||||| ||||||||   |||||||||| |||| |||||||  |||||||| ||||||
Sbjct: 3317 gctcgtgctaaagctggcgtgcatgcttctatgctggacaagaccccgccttctcctggt 3376

                                      
Query: 559  gagccggttgcaatattcatgagcaa 584
            ||||| || ||||| |||||||||||
Sbjct: 3377 gagccagtagcaatcttcatgagcaa 3402



to top

>ref|XM_450769.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3772

 Score =  287 bits (145), Expect = 2e-74
 Identities = 482/594 (81%), Gaps = 3/594 (0%)
 Strand = Plus / Plus

                                                                        
Query: 13   cctactctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttg 72
            ||||||||||| | ||| |||||||||||||||||||| || |||  | | |||||| ||
Sbjct: 2819 cctactctaagaattgcaaacaaatatttacaggactctatagttaaattcaggaagctg 2878

                                                                        
Query: 73   cttcagaagcaagagtctggttccaagaaacccaagaagggagccgc---acctcctcca 129
            || ||||||||||| || ||||||||||| |||||||||||||| ||   ||||||||||
Sbjct: 2879 ctccagaagcaagaatccggttccaagaagcccaagaagggagctgctgcacctcctcca 2938

                                                                        
Query: 130  tcagcagaaaacaagctcactgttggtctgatatatgtcaacgagcactatgatggatgg 189
            || |  ||||||||||| |||||||||||||| ||||| || || |||||| ||||||||
Sbjct: 2939 tctgaggaaaacaagctgactgttggtctgatctatgttaatgaacactattatggatgg 2998

                                                                        
Query: 190  aaagaacaatgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcc 249
            ||||| |||||| |||||||||| || || || ||||| |||||| |  | |||||||||
Sbjct: 2999 aaagagcaatgtctgagggtgctccagtctaaatttgacagccaagctcggtcctttgcc 3058

                                                                        
Query: 250  cccgacgaggagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttc 309
            || || ||||||||||  |||||  | | ||| |||| |||||  |  ||| | ||||||
Sbjct: 3059 cctgatgaggagattactgaagcactgaagaattgctccatcgggcaggaaactaatttc 3118

                                                                        
Query: 310  aaacaagtacagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaac 369
            |||||||| ||||||||||||||||||||||||| ||  || || ||||| || | ||  
Sbjct: 3119 aaacaagtccagaagctctgcatgcctttcatcaagtcgaaaaaggatgaggccaagagt 3178

                                                                        
Query: 370  gttggtccccaggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggag 429
            ||||| ||||| ||| ||||| |||||||||| ||||||||||| ||||| || ||||||
Sbjct: 3179 gttgggccccatgctttaaatctgaagcttccatttggtgaaatgaatgttctcgaggag 3238

                                                                        
Query: 430  aacctagagctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcactt 489
            ||  | ||| ||||||  |||||| | || ||||| ||||| |||||| |||| ||   |
Sbjct: 3239 aatttggagttgatcaagaggcaggtaggccttgaccatgtagaggtcttgtcagcttct 3298

                                                                        
Query: 490  gatggagctgctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgcct 549
            |||| |||  ||||||| || |||||    |||| |||  || | |||||||  ||||||
Sbjct: 3299 gatgaagcaactcgtgctaaggctggtgctcatgtttcaatgttggacaagaccccgcct 3358

                                                                  
Query: 550  tcccctggtgagccggttgcaatattcatgagcaagcaggagtttgaagtccag 603
            || |||||||| || || ||||| ||||| ||||||||||||||||||| ||||
Sbjct: 3359 tctcctggtgaaccagtagcaatcttcatcagcaagcaggagtttgaagcccag 3412



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  287 bits (145), Expect = 2e-74
 Identities = 482/594 (81%), Gaps = 3/594 (0%)
 Strand = Plus / Minus

                                                                            
Query: 13       cctactctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttg 72
                ||||||||||| | ||| |||||||||||||||||||| || |||  | | |||||| ||
Sbjct: 12677981 cctactctaagaattgcaaacaaatatttacaggactctatagttaaattcaggaagctg 12677922

                                                                            
Query: 73       cttcagaagcaagagtctggttccaagaaacccaagaagggagccgc---acctcctcca 129
                || ||||||||||| || ||||||||||| |||||||||||||| ||   ||||||||||
Sbjct: 12677921 ctccagaagcaagaatccggttccaagaagcccaagaagggagctgctgcacctcctcca 12677862

                                                                            
Query: 130      tcagcagaaaacaagctcactgttggtctgatatatgtcaacgagcactatgatggatgg 189
                || |  ||||||||||| |||||||||||||| ||||| || || |||||| ||||||||
Sbjct: 12677861 tctgaggaaaacaagctgactgttggtctgatctatgttaatgaacactattatggatgg 12677802

                                                                            
Query: 190      aaagaacaatgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcc 249
                ||||| |||||| |||||||||| || || || ||||| |||||| |  | |||||||||
Sbjct: 12677801 aaagagcaatgtctgagggtgctccagtctaaatttgacagccaagctcggtcctttgcc 12677742

                                                                            
Query: 250      cccgacgaggagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttc 309
                || || ||||||||||  |||||  | | ||| |||| |||||  |  ||| | ||||||
Sbjct: 12677741 cctgatgaggagattactgaagcactgaagaattgctccatcgggcaggaaactaatttc 12677682

                                                                            
Query: 310      aaacaagtacagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaac 369
                |||||||| ||||||||||||||||||||||||| ||  || || ||||| || | ||  
Sbjct: 12677681 aaacaagtccagaagctctgcatgcctttcatcaagtcgaaaaaggatgaggccaagagt 12677622

                                                                            
Query: 370      gttggtccccaggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggag 429
                ||||| ||||| ||| ||||| |||||||||| ||||||||||| ||||| || ||||||
Sbjct: 12677621 gttgggccccatgctttaaatctgaagcttccatttggtgaaatgaatgttctcgaggag 12677562

                                                                            
Query: 430      aacctagagctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcactt 489
                ||  | ||| ||||||  |||||| | || ||||| ||||| |||||| |||| ||   |
Sbjct: 12677561 aatttggagttgatcaagaggcaggtaggccttgaccatgtagaggtcttgtcagcttct 12677502

                                                                            
Query: 490      gatggagctgctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgcct 549
                |||| |||  ||||||| || |||||    |||| |||  || | |||||||  ||||||
Sbjct: 12677501 gatgaagcaactcgtgctaaggctggtgctcatgtttcaatgttggacaagaccccgcct 12677442

                                                                      
Query: 550      tcccctggtgagccggttgcaatattcatgagcaagcaggagtttgaagtccag 603
                || |||||||| || || ||||| ||||| ||||||||||||||||||| ||||
Sbjct: 12677441 tctcctggtgaaccagtagcaatcttcatcagcaagcaggagtttgaagcccag 12677388



 Score =  280 bits (141), Expect = 6e-72
 Identities = 357/428 (83%), Gaps = 1/428 (0%)
 Strand = Plus / Plus

                                                                            
Query: 19       ctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttgcttcag 78
                ||||| | ||| ||||||||||||||||||||||| |||  | | |||||| |||| |||
Sbjct: 19184032 ctaagaattgctaacaaatatttacaggactccatagttaaattcaggaagctgctccag 19184091

                                                                            
Query: 79       aagcaagagtctggttccaagaaacccaagaagggagccgcacctcctccatcagcagaa 138
                |||||||| ||||||||||||||||||||||||||| | |||||||||||||| |   ||
Sbjct: 19184092 aagcaagaatctggttccaagaaacccaagaagggaactgcacctcctccatctgagcaa 19184151

                                                                            
Query: 139      aacaagctcactgttggtctgatatatgtcaacgagcactatgatggatggaaagaacaa 198
                |||||||| |||||||||||| | || ||||| ||| ||||| ||||||||||||| |||
Sbjct: 19184152 aacaagctgactgttggtctggtctacgtcaatgagaactattatggatggaaagagcaa 19184211

                                                                            
Query: 199      tgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcccccgacgag 258
                ||||||||||| || || || || |||||||||||| || | |  ||||| || || |||
Sbjct: 19184212 tgtttgagggttctccagtctaaatttgatagccaagcacgtttgtttgctcctgatgag 19184271

                                                                            
Query: 259      gagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttcaaacaagta 318
                |||||||| ||||| || | |||||||| |||||  |  ||| | || ||||||||||| 
Sbjct: 19184272 gagattaatgaagcattgaagaactgctccatcggacaggaaactaacttcaaacaagtc 19184331

                                                                            
Query: 319      cagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaacgtt-ggtcc 377
                ||||||||||||||||||||||||| ||  || |||||||| || ||||  ||| || ||
Sbjct: 19184332 cagaagctctgcatgcctttcatcaagtcgaaaaaagatgaggcgaggagtgttggggcc 19184391

                                                                            
Query: 378      ccaggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggagaacctaga 437
                ||| ||| | |||||||||||||||||||||||||| | ||| || |||||| || | ||
Sbjct: 19184392 ccacgctttgaatttgaagcttccttttggtgaaatgagtgttctcgaggaggacttgga 19184451

                        
Query: 438      gctgatca 445
                ||||||||
Sbjct: 19184452 gctgatca 19184459



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                     
Query: 489      tgatggagctgctcgtgccaaagctggaaagcatgcttctctgctagacaaga 541
                ||||| |||||||||||| ||||||||   |||||| ||| |||| |||||||
Sbjct: 19184502 tgatgaagctgctcgtgctaaagctggcgtgcatgcctctatgctggacaaga 19184554



to top

>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0041C07
          Length = 179047

 Score =  287 bits (145), Expect = 2e-74
 Identities = 482/594 (81%), Gaps = 3/594 (0%)
 Strand = Plus / Minus

                                                                          
Query: 13     cctactctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttg 72
              ||||||||||| | ||| |||||||||||||||||||| || |||  | | |||||| ||
Sbjct: 143919 cctactctaagaattgcaaacaaatatttacaggactctatagttaaattcaggaagctg 143860

                                                                          
Query: 73     cttcagaagcaagagtctggttccaagaaacccaagaagggagccgc---acctcctcca 129
              || ||||||||||| || ||||||||||| |||||||||||||| ||   ||||||||||
Sbjct: 143859 ctccagaagcaagaatccggttccaagaagcccaagaagggagctgctgcacctcctcca 143800

                                                                          
Query: 130    tcagcagaaaacaagctcactgttggtctgatatatgtcaacgagcactatgatggatgg 189
              || |  ||||||||||| |||||||||||||| ||||| || || |||||| ||||||||
Sbjct: 143799 tctgaggaaaacaagctgactgttggtctgatctatgttaatgaacactattatggatgg 143740

                                                                          
Query: 190    aaagaacaatgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcc 249
              ||||| |||||| |||||||||| || || || ||||| |||||| |  | |||||||||
Sbjct: 143739 aaagagcaatgtctgagggtgctccagtctaaatttgacagccaagctcggtcctttgcc 143680

                                                                          
Query: 250    cccgacgaggagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttc 309
              || || ||||||||||  |||||  | | ||| |||| |||||  |  ||| | ||||||
Sbjct: 143679 cctgatgaggagattactgaagcactgaagaattgctccatcgggcaggaaactaatttc 143620

                                                                          
Query: 310    aaacaagtacagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaac 369
              |||||||| ||||||||||||||||||||||||| ||  || || ||||| || | ||  
Sbjct: 143619 aaacaagtccagaagctctgcatgcctttcatcaagtcgaaaaaggatgaggccaagagt 143560

                                                                          
Query: 370    gttggtccccaggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggag 429
              ||||| ||||| ||| ||||| |||||||||| ||||||||||| ||||| || ||||||
Sbjct: 143559 gttgggccccatgctttaaatctgaagcttccatttggtgaaatgaatgttctcgaggag 143500

                                                                          
Query: 430    aacctagagctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcactt 489
              ||  | ||| ||||||  |||||| | || ||||| ||||| |||||| |||| ||   |
Sbjct: 143499 aatttggagttgatcaagaggcaggtaggccttgaccatgtagaggtcttgtcagcttct 143440

                                                                          
Query: 490    gatggagctgctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgcct 549
              |||| |||  ||||||| || |||||    |||| |||  || | |||||||  ||||||
Sbjct: 143439 gatgaagcaactcgtgctaaggctggtgctcatgtttcaatgttggacaagaccccgcct 143380

                                                                    
Query: 550    tcccctggtgagccggttgcaatattcatgagcaagcaggagtttgaagtccag 603
              || |||||||| || || ||||| ||||| ||||||||||||||||||| ||||
Sbjct: 143379 tctcctggtgaaccagtagcaatcttcatcagcaagcaggagtttgaagcccag 143326



to top

>dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D12, full
            insert sequence
          Length = 3772

 Score =  287 bits (145), Expect = 2e-74
 Identities = 482/594 (81%), Gaps = 3/594 (0%)
 Strand = Plus / Plus

                                                                        
Query: 13   cctactctaagnagtgcgaacaaatatttacaggactccattgttttaatgaggaagttg 72
            ||||||||||| | ||| |||||||||||||||||||| || |||  | | |||||| ||
Sbjct: 2819 cctactctaagaattgcaaacaaatatttacaggactctatagttaaattcaggaagctg 2878

                                                                        
Query: 73   cttcagaagcaagagtctggttccaagaaacccaagaagggagccgc---acctcctcca 129
            || ||||||||||| || ||||||||||| |||||||||||||| ||   ||||||||||
Sbjct: 2879 ctccagaagcaagaatccggttccaagaagcccaagaagggagctgctgcacctcctcca 2938

                                                                        
Query: 130  tcagcagaaaacaagctcactgttggtctgatatatgtcaacgagcactatgatggatgg 189
            || |  ||||||||||| |||||||||||||| ||||| || || |||||| ||||||||
Sbjct: 2939 tctgaggaaaacaagctgactgttggtctgatctatgttaatgaacactattatggatgg 2998

                                                                        
Query: 190  aaagaacaatgtttgagggtgcttcaatcaaattttgatagccaaacatgctcctttgcc 249
            ||||| |||||| |||||||||| || || || ||||| |||||| |  | |||||||||
Sbjct: 2999 aaagagcaatgtctgagggtgctccagtctaaatttgacagccaagctcggtcctttgcc 3058

                                                                        
Query: 250  cccgacgaggagattaacgaagcgttaaggaactgcttcatcgaccgcgaatcaaatttc 309
            || || ||||||||||  |||||  | | ||| |||| |||||  |  ||| | ||||||
Sbjct: 3059 cctgatgaggagattactgaagcactgaagaattgctccatcgggcaggaaactaatttc 3118

                                                                        
Query: 310  aaacaagtacagaagctctgcatgcctttcatcaggttcaagaaagatgaagcaaggaac 369
            |||||||| ||||||||||||||||||||||||| ||  || || ||||| || | ||  
Sbjct: 3119 aaacaagtccagaagctctgcatgcctttcatcaagtcgaaaaaggatgaggccaagagt 3178

                                                                        
Query: 370  gttggtccccaggctctaaatttgaagcttccttttggtgaaattaatgtgcttgaggag 429
            ||||| ||||| ||| ||||| |||||||||| ||||||||||| ||||| || ||||||
Sbjct: 3179 gttgggccccatgctttaaatctgaagcttccatttggtgaaatgaatgttctcgaggag 3238

                                                                        
Query: 430  aacctagagctgatcagaaggcagttgggtcttgagcatgttgaggtcctgtcggcactt 489
            ||  | ||| ||||||  |||||| | || ||||| ||||| |||||| |||| ||   |
Sbjct: 3239 aatttggagttgatcaagaggcaggtaggccttgaccatgtagaggtcttgtcagcttct 3298

                                                                        
Query: 490  gatggagctgctcgtgccaaagctggaaagcatgcttctctgctagacaagaatccgcct 549
            |||| |||  ||||||| || |||||    |||| |||  || | |||||||  ||||||
Sbjct: 3299 gatgaagcaactcgtgctaaggctggtgctcatgtttcaatgttggacaagaccccgcct 3358

                                                                  
Query: 550  tcccctggtgagccggttgcaatattcatgagcaagcaggagtttgaagtccag 603
            || |||||||| || || ||||| ||||| ||||||||||||||||||| ||||
Sbjct: 3359 tctcctggtgaaccagtagcaatcttcatcagcaagcaggagtttgaagcccag 3412



to top

>gb|AY107623.1| Zea mays PCO144466 mRNA sequence
          Length = 2543

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 142/173 (82%), Gaps = 3/173 (1%)
 Strand = Plus / Plus

                                                                        
Query: 43   caggactccattgttttaatgaggaagttgcttcagaagcaagagtctggttccaagaaa 102
            ||||| ||||| ||||| ||||||||  ||||||||||||||||||||||||| ||||| 
Sbjct: 1738 caggattccatagttttgatgaggaaactgcttcagaagcaagagtctggttctaagaag 1797

                                                                        
Query: 103  cccaagaagggagccgcac---ctcctccatcagcagaaaacaagctcactgttggtctg 159
            || ||||||||||| ||||   | ||||| || |  ||||| ||| | |   ||||||| 
Sbjct: 1798 cctaagaagggagctgcaccggcacctccgtccgaggaaaagaagatgagcattggtctc 1857

                                                                 
Query: 160  atatatgtcaacgagcactatgatggatggaaagaacaatgtttgagggtgct 212
            |||||||| |||||||||||   |||||||||||| || || |||||||||||
Sbjct: 1858 atatatgtgaacgagcactactctggatggaaagagcagtgcttgagggtgct 1910



to top

>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04,
             complete sequence
          Length = 95383

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 151   gttggtctgatatatgtcaacgagcactatgatggatggaaagaacaatgtttgag 206
             |||||||| |||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 74150 gttggtctaatatatgtgaatgaacactatgatggctggaaagagcaatgtttgag 74205



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 331   atgcctttcatcaggttcaagaaagatgaagca 363
             ||||||||||| | |||||||||||||||||||
Sbjct: 74332 atgcctttcattaagttcaagaaagatgaagca 74364



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                       
Query: 151     gttggtctgatatatgtcaacgagcactatgatggatggaaagaacaatgtttgag 206
               |||||||| |||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 8495880 gttggtctaatatatgtgaatgaacactatgatggctggaaagagcaatgtttgag 8495935



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 331     atgcctttcatcaggttcaagaaagatgaagca 363
               ||||||||||| | |||||||||||||||||||
Sbjct: 8496062 atgcctttcattaagttcaagaaagatgaagca 8496094



to top

>dbj|AK120403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088K21, full
            insert sequence
          Length = 5000

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                    
Query: 151  gttggtctgatatatgtcaacgagcactatgatggatggaaagaacaatgtttgag 206
            |||||||| |||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 4228 gttggtctaatatatgtgaatgaacactatgatggctggaaagagcaatgtttgag 4283



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 331  atgcctttcatcaggttcaagaaagatgaagca 363
            ||||||||||| | |||||||||||||||||||
Sbjct: 4410 atgcctttcattaagttcaagaaagatgaagca 4442



to top

>emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chromosome 4, complete sequence
          Length = 221208

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 180    tgatggatggaaagaacaatgtt 202
              |||||||||||||||||||||||
Sbjct: 131761 tgatggatggaaagaacaatgtt 131783



to top

>ref|XM_364839.1| Magnaporthe grisea 70-15 hypothetical protein (MG09684.4) partial
            mRNA
          Length = 6480

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 122  ctcctccatcagcagaaaacaa 143
            ||||||||||||||||||||||
Sbjct: 5514 ctcctccatcagcagaaaacaa 5493



to top

>gb|DQ493952.1| Magnaporthe grisea 70-15 clone 41N21 telomere region, partial sequence
          Length = 43132

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 122   ctcctccatcagcagaaaacaa 143
             ||||||||||||||||||||||
Sbjct: 14416 ctcctccatcagcagaaaacaa 14437



to top

>gb|AC101902.9| Mus musculus chromosome 1, clone RP24-147M23, complete sequence
          Length = 223784

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 83    aagagtctggttccaagaaacc 104
             ||||||||||||||||||||||
Sbjct: 13871 aagagtctggttccaagaaacc 13892



to top

>gb|AC126802.4| Mus musculus BAC clone RP24-543J12 from chromosome 5, complete sequence
          Length = 154808

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 60     aatgaggaagttgcttcagaag 81
              ||||||||||||||||||||||
Sbjct: 111266 aatgaggaagttgcttcagaag 111287



to top

>gb|AC132258.3| Mus musculus BAC clone RP24-361F13 from 1, complete sequence
          Length = 130493

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 83     aagagtctggttccaagaaacc 104
              ||||||||||||||||||||||
Sbjct: 102032 aagagtctggttccaagaaacc 102053



to top

>ref|XM_723538.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07685)
           partial mRNA
          Length = 534

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 329 gcatgcctttcatcaggttca 349
           |||||||||||||||||||||
Sbjct: 473 gcatgcctttcatcaggttca 453



to top

>gb|AC146775.8| Medicago truncatula clone mth2-95g14, complete sequence
          Length = 139593

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    actccattgttttaatgagga 67
             |||||||||||||||||||||
Sbjct: 95725 actccattgttttaatgagga 95705



to top

>emb|AL138767.15| Human DNA sequence from clone RP11-57C13 on chromosome 10 Contains the
             3' end of the MINPP gene for multiple inositol
             polyphosphate histidine phosphatase 1, three novel genes,
             a ribosomal protein S26 (RPS26) pseudogene, the 5' end of
             the PAPSS2 gene for 3'-phosphoadenosine 5'-phosphosulfate
             synthase 2 and a CpG island, complete sequence
          Length = 111645

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 601   cagatttaagcttcagattaa 621
             |||||||||||||||||||||
Sbjct: 43716 cagatttaagcttcagattaa 43696



to top

>gb|AC113613.4| Homo sapiens BAC clone RP11-511I21 from 4, complete sequence
          Length = 86568

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 31    aacaaatatttacaggactcc 51
             |||||||||||||||||||||
Sbjct: 54093 aacaaatatttacaggactcc 54073



to top

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 329     gcatgcctttcatcaggttca 349
               |||||||||||||||||||||
Sbjct: 1423964 gcatgcctttcatcaggttca 1423944



to top

>gb|AC115594.2| Dictyostelium discoideum chromosome 2 map 4071862-4101005 strain AX4,
            complete sequence
          Length = 29143

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 299  aatcaaatttcaaacaagtac 319
            |||||||||||||||||||||
Sbjct: 8840 aatcaaatttcaaacaagtac 8820



to top

>gb|AC167669.1| Mus musculus BAC clone RP24-138L8 from chromosome 13, complete sequence
          Length = 202905

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 60     aatgaggaagttgcttcagaa 80
              |||||||||||||||||||||
Sbjct: 186282 aatgaggaagttgcttcagaa 186302



to top

>gb|AC015445.3|F2J10 Sequence of BAC F2J10 from Arabidopsis thaliana chromosome 1,
            complete sequence
          Length = 91720

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 379  caggctctaaatttgaagcttccttttgg 407
            |||||||||||||||| ||| ||||||||
Sbjct: 6884 caggctctaaatttgaggctgccttttgg 6856



to top

>gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, complete sequence
          Length = 248750

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 322    aagctctgcatgcctttcatc 342
              |||||||||||||||||||||
Sbjct: 147864 aagctctgcatgcctttcatc 147844



to top

>ref|NM_025807.1| Mus musculus solute carrier family 16 (monocarboxylic acid
            transporters), member 9 (Slc16a9), mRNA
          Length = 3565

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  aagaacaatgtttgagggtg 210
            ||||||||||||||||||||
Sbjct: 2690 aagaacaatgtttgagggtg 2709



to top

>gb|BC034205.1| Mus musculus solute carrier family 16 (monocarboxylic acid
            transporters), member 9, mRNA (cDNA clone IMAGE:4987055),
            containing frame-shift errors
          Length = 2750

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  aagaacaatgtttgagggtg 210
            ||||||||||||||||||||
Sbjct: 2645 aagaacaatgtttgagggtg 2664



to top

>gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section 6 of 9 of the complete
              sequence
          Length = 250421

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 400    ccttttggtgaaattaatgt 419
              ||||||||||||||||||||
Sbjct: 160828 ccttttggtgaaattaatgt 160847



to top

>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence
          Length = 182534

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    agagtctggttccaagaaac 103
             ||||||||||||||||||||
Sbjct: 41011 agagtctggttccaagaaac 40992



to top

>gb|AC134414.12| Mus musculus chromosome 15, clone RP24-70H12, complete sequence
          Length = 195834

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 186    atggaaagaacaatgtttga 205
              ||||||||||||||||||||
Sbjct: 180371 atggaaagaacaatgtttga 180390



to top

>ref|XM_417954.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 1200009H11
           (LOC419818), mRNA
          Length = 1413

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 620 aatcttctcacagaactttg 639
           ||||||||||||||||||||
Sbjct: 531 aatcttctcacagaactttg 512



to top

>gb|AC127348.4| Mus musculus BAC clone RP23-57D10 from chromosome 7, complete sequence
          Length = 229190

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   tggatggaaagaacaatgtt 202
             ||||||||||||||||||||
Sbjct: 35660 tggatggaaagaacaatgtt 35679



to top

>gb|AC123531.4| Mus musculus BAC clone RP24-289C11 from chromosome 15, complete
             sequence
          Length = 165766

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   atggaaagaacaatgtttga 205
             ||||||||||||||||||||
Sbjct: 88950 atggaaagaacaatgtttga 88931



to top

>gb|AC158776.5| Mus musculus chromosome 15, clone RP23-261G10, complete sequence
          Length = 192769

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    agagtctggttccaagaaac 103
             ||||||||||||||||||||
Sbjct: 93551 agagtctggttccaagaaac 93532



to top

>gb|AY517485.1| Mus musculus dendritic cell-specific transmembrane protein variant
           2 mRNA, complete cds, alternatively spliced
          Length = 1685

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  agagtctggttccaagaaac 103
           ||||||||||||||||||||
Sbjct: 562 agagtctggttccaagaaac 543



to top

>gb|AY517483.1| Mus musculus dendritic cell-specific transmembrane protein mRNA,
           complete cds, alternatively spliced
          Length = 1994

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  agagtctggttccaagaaac 103
           ||||||||||||||||||||
Sbjct: 562 agagtctggttccaagaaac 543



to top

>ref|XM_749904.1| Aspergillus fumigatus Af293 transcription initiation factor TFIID
           subunit 12 (Afu3g06090) partial mRNA
          Length = 1845

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 329 gcatgcctttcatcaggttc 348
           ||||||||||||||||||||
Sbjct: 241 gcatgcctttcatcaggttc 222



to top

>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence
          Length = 242112

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   aagaacaatgtttgagggtg 210
             ||||||||||||||||||||
Sbjct: 99638 aagaacaatgtttgagggtg 99619



to top

>gb|AC124193.2| Mus musculus BAC clone RP23-277F3 from 16, complete sequence
          Length = 190347

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 321   gaagctctgcatgcctttcatcag 344
             |||||| |||||||||||||||||
Sbjct: 15334 gaagctgtgcatgcctttcatcag 15357



to top

>gb|AC133157.1| Mus musculus BAC clone RP24-472D8 from 2, complete sequence
          Length = 172460

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 180    tgatggatggaaagaacaatgttt 203
              |||||||||||| |||||||||||
Sbjct: 145852 tgatggatggaaggaacaatgttt 145829



to top

>gb|AC158567.3| Mus musculus chromosome 15, clone RP24-93F2, complete sequence
          Length = 188718

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    agagtctggttccaagaaac 103
             ||||||||||||||||||||
Sbjct: 18171 agagtctggttccaagaaac 18152



to top

>gb|AC161805.4| Mus musculus chromosome 1, clone RP24-325N3, complete sequence
          Length = 192649

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 180    tgatggatggaaagaacaatgttt 203
              |||||||||||| |||||||||||
Sbjct: 146470 tgatggatggaaggaacaatgttt 146493



to top

>emb|BX957346.14| Zebrafish DNA sequence from clone CH211-117K16 in linkage group 25,
             complete sequence
          Length = 149598

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   gatggatggaaagaacaatg 200
             ||||||||||||||||||||
Sbjct: 78962 gatggatggaaagaacaatg 78981



to top

>dbj|AK154384.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630025L15
           product:transmembrane 7 superfamily member 4, full
           insert sequence
          Length = 1990

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  agagtctggttccaagaaac 103
           ||||||||||||||||||||
Sbjct: 562 agagtctggttccaagaaac 543



to top

>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 404     ttggtgaaattaatgtgctt 423
               ||||||||||||||||||||
Sbjct: 1596116 ttggtgaaattaatgtgctt 1596135



to top

>emb|BX571973.15| Zebrafish DNA sequence from clone DKEY-254A11 in linkage group 22,
              complete sequence
          Length = 214325

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    gatggatggaaagaacaatg 200
              ||||||||||||||||||||
Sbjct: 109969 gatggatggaaagaacaatg 109950



to top

>dbj|AK004599.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched
            library, clone:1200004H04 product:hypothetical protein,
            full insert sequence
          Length = 2927

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  aagaacaatgtttgagggtg 210
            ||||||||||||||||||||
Sbjct: 2869 aagaacaatgtttgagggtg 2888



to top

>dbj|AK004556.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched
            library, clone:1200003C15 product:hypothetical protein,
            full insert sequence
          Length = 3565

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  aagaacaatgtttgagggtg 210
            ||||||||||||||||||||
Sbjct: 2690 aagaacaatgtttgagggtg 2709



to top

>dbj|AK014697.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
           library, clone:4833414I07 product:similar to DC-SPECIFIC
           TRANSMEMBRANE PROTEIN (PUTATIVE IL-4 INDUCED PROTEIN
           FIND) [Homo sapiens], full insert sequence
          Length = 1685

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  agagtctggttccaagaaac 103
           ||||||||||||||||||||
Sbjct: 562 agagtctggttccaagaaac 543



to top

>emb|CR338830.1| Gallus gallus finished cDNA, clone ChEST974l3
          Length = 887

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 620 aatcttctcacagaactttg 639
           ||||||||||||||||||||
Sbjct: 425 aatcttctcacagaactttg 406



to top

>dbj|AB109561.1| Mus musculus DCSTAMP mRNA for differentially spliced dendritic
           cell-specific transmembrane protein, complete cds
          Length = 1825

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  agagtctggttccaagaaac 103
           ||||||||||||||||||||
Sbjct: 561 agagtctggttccaagaaac 542



to top

>dbj|AB109560.1| Mus musculus DCSTAMP mRNA for dendritic cell-specific transmembrane
           protein, complete cds
          Length = 1993

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  agagtctggttccaagaaac 103
           ||||||||||||||||||||
Sbjct: 561 agagtctggttccaagaaac 542



to top

>emb|AL590390.5| Mouse DNA sequence from clone RP23-294H14 on chromosome X, complete
             sequence
          Length = 114156

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 179   atgatggatggaaagaacaatgtt 202
             ||||||||||||| ||||||||||
Sbjct: 80068 atgatggatggaaggaacaatgtt 80045



to top

>emb|AL935306.6| Zebrafish DNA sequence from clone DKEY-65O9, complete sequence
          Length = 207183

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     aaatatttacaggactccat 53
              ||||||||||||||||||||
Sbjct: 117520 aaatatttacaggactccat 117539



to top

>gb|AC005615.1|AC005615 Homo sapines chromosome 19, cosmid R28058, complete sequence
          Length = 42619

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   ccatcagcagaaaacaagct 146
             ||||||||||||||||||||
Sbjct: 24055 ccatcagcagaaaacaagct 24074



to top

>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 404     ttggtgaaattaatgtgctt 423
               ||||||||||||||||||||
Sbjct: 1207587 ttggtgaaattaatgtgctt 1207568



to top

>gb|AC160645.2| Gallus gallus BAC clone CH261-21L11 from chromosome unknown, complete
              sequence
          Length = 223748

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 584    agcaggagtttgaagtccag 603
              ||||||||||||||||||||
Sbjct: 188230 agcaggagtttgaagtccag 188249



to top

>ref|NM_029422.1| Mus musculus transmembrane 7 superfamily member 4 (Tm7sf4), mRNA
          Length = 1994

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  agagtctggttccaagaaac 103
           ||||||||||||||||||||
Sbjct: 562 agagtctggttccaagaaac 543



to top

>gb|AC149611.6| Mus musculus BAC clone RP23-157P4 from 7, complete sequence
          Length = 217353

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   tggatggaaagaacaatgtt 202
             ||||||||||||||||||||
Sbjct: 89257 tggatggaaagaacaatgtt 89238



to top

>emb|AL732399.11| Mouse DNA sequence from clone RP23-311A22 on chromosome X, complete
              sequence
          Length = 198033

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    tggatggaaagaacaatgtt 202
              ||||||||||||||||||||
Sbjct: 155553 tggatggaaagaacaatgtt 155534



to top

>emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chromosome 11, complete
             sequence
          Length = 235868

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    ttgttttaatgaggaagttg 72
             ||||||||||||||||||||
Sbjct: 37039 ttgttttaatgaggaagttg 37058


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,825,996
Number of Sequences: 3902068
Number of extensions: 6825996
Number of successful extensions: 124366
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124099
Number of HSP's gapped (non-prelim): 252
length of query: 674
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 651
effective length of database: 17,143,297,704
effective search space: 11160286805304
effective search space used: 11160286805304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top