ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags24d24 |
|---|---|
| Clone Library Name | barley_pub |
>SURF1_FUGRU (O57593) Surfeit locus protein 1 (Fragment)| Length = 240 Score = 60.8 bits (146), Expect = 7e-10 Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 11/130 (8%) Frame = +2 Query: 38 KLFLFAPGAITFGLGTWQLFRRQDKVEMLEYRTRRLEMEPVAWNETVSSAXSRDPAVLEF 217 K FL A TFGLGTWQ+ RRQ K+E+++ T+ EP+ + S LE+ Sbjct: 4 KWFLLLIPATTFGLGTWQVKRRQWKMELIDGLTKLTTAEPIPLPIDPAELSS-----LEY 58 Query: 218 RKIVCEGDFDTEKSVFLGPRS-----------RSISGVTENGXYVITPLIPRPAESGSLQ 364 R++ G +D K +++ PRS +S E G VITP L Sbjct: 59 RRVKMRGKYDHSKELYILPRSPVDPEKEAREAGRLSSSGETGANVITPF-----HVTDLG 113 Query: 365 SPILVNRGWI 394 ILVNRG++ Sbjct: 114 ITILVNRGYV 123
>SHY1_SCHPO (Q9Y810) Protein shy1 (SURF1-like protein)| Length = 290 Score = 60.1 bits (144), Expect = 1e-09 Identities = 39/116 (33%), Positives = 64/116 (55%) Frame = +2 Query: 47 LFAPGAITFGLGTWQLFRRQDKVEMLEYRTRRLEMEPVAWNETVSSAXSRDPAVLEFRKI 226 L A +TF LGTWQ+ RR+ K+ ++ T RL+ + +TV+ +D LE+ ++ Sbjct: 43 LSAVPIVTFALGTWQVKRREWKMGIINTLTERLQQPAILLPKTVT---EQDTKKLEWTRV 99 Query: 227 VCEGDFDTEKSVFLGPRSRSISGVTENGXYVITPLIPRPAESGSLQSPILVNRGWI 394 + G F ++ + +GPR++ + G +V+TP I + G ILVNRGWI Sbjct: 100 LLRGVFCHDQEMLVGPRTKE----GQPGYHVVTPFI---LDDG---RRILVNRGWI 145
>SURF1_RAT (Q9QXU2) Surfeit locus protein 1| Length = 306 Score = 57.0 bits (136), Expect = 1e-08 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 10/141 (7%) Frame = +2 Query: 2 SARGGKEGGAWSKLFLFAPGAITFGLGTWQLFRRQDKVEMLEYRTRRLEMEPVAWNETVS 181 +A E ++ + FL A FGLGTWQ+ RR+ K++++ R+ EP+ Sbjct: 58 TAAAKAEDDSFLQWFLLFIPATAFGLGTWQVQRRKWKLKLIAELESRVMAEPIP-----L 112 Query: 182 SAXSRDPAVLEFRKIVCEGDFDTEKSVFLGPRS----------RSISGVTENGXYVITPL 331 A + LE+R + G FD K +++ PR+ TE+G YV+TP Sbjct: 113 PADPMELKNLEYRPVKVRGHFDHSKELYIMPRTMVDPVREARDAGRLSSTESGAYVVTPF 172 Query: 332 IPRPAESGSLQSPILVNRGWI 394 L ILVNRG++ Sbjct: 173 -----HCSDLGVTILVNRGFV 188
>SURF1_CHICK (Q800L1) Surfeit locus protein 1| Length = 309 Score = 55.5 bits (132), Expect = 3e-08 Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 11/133 (8%) Frame = +2 Query: 29 AWSKLFLFAPGAITFGLGTWQLFRRQDKVEMLEYRTRRLEMEPVAWNETVSSAXSRDPAV 208 AW K L F LGTWQ+ RR+ K++++ RL EP+ T+ ++ Sbjct: 70 AWLKWGLLLVPLTAFCLGTWQIQRRKWKLDLIAQLASRLSSEPIPL--TLDPMELKE--- 124 Query: 209 LEFRKIVCEGDFDTEKSVFLGPRS-----------RSISGVTENGXYVITPLIPRPAESG 355 LE+R + G FD K +++ PRS ++ ENG VITP Sbjct: 125 LEYRPVKVRGHFDHSKELYILPRSLVDPEREAREAGKLTSHAENGANVITPFY-----CT 179 Query: 356 SLQSPILVNRGWI 394 L ILVNRG++ Sbjct: 180 ELGVTILVNRGFV 192
>SURF1_MOUSE (P09925) Surfeit locus protein 1| Length = 306 Score = 55.5 bits (132), Expect = 3e-08 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 10/141 (7%) Frame = +2 Query: 2 SARGGKEGGAWSKLFLFAPGAITFGLGTWQLFRRQDKVEMLEYRTRRLEMEPVAWNETVS 181 +A E ++ + FL A FGLGTWQ+ RR+ K++++ R+ EP+ Sbjct: 58 TAAAKAEDDSFLQWFLLLIPATAFGLGTWQVQRRKWKLKLIAELESRVMAEPIP-----L 112 Query: 182 SAXSRDPAVLEFRKIVCEGDFDTEKSVFLGPRS----------RSISGVTENGXYVITPL 331 A + LE+R + G FD K +++ PR+ TE+G +V+TP Sbjct: 113 PADPMELKNLEYRPVKVRGHFDHSKELYIMPRTMVDPVREARDAGRLSSTESGAHVVTPF 172 Query: 332 IPRPAESGSLQSPILVNRGWI 394 L ILVNRG++ Sbjct: 173 -----HCSDLGVTILVNRGFV 188
>SHY1_YEAST (P53266) Protein SHY1| Length = 389 Score = 55.1 bits (131), Expect = 4e-08 Identities = 34/116 (29%), Positives = 58/116 (50%) Frame = +2 Query: 47 LFAPGAITFGLGTWQLFRRQDKVEMLEYRTRRLEMEPVAWNETVSSAXSRDPAVLEFRKI 226 +FA I+F LGTWQ+ R + K +++ +L EP+ ++ + D E+RK+ Sbjct: 77 MFAMPIISFYLGTWQVRRLKWKTKLIAACETKLTYEPIPLPKSFTPDMCED---WEYRKV 133 Query: 227 VCEGDFDTEKSVFLGPRSRSISGVTENGXYVITPLIPRPAESGSLQSPILVNRGWI 394 + G F + +F+GPR ++ E G ++ TP I +L+ RGWI Sbjct: 134 ILTGHFLHNEEMFVGPRKKN----GEKGYFLFTPFI-----RDDTGEKVLIERGWI 180
>SURF1_DROME (Q9U4F3) SURF1-like protein| Length = 300 Score = 54.7 bits (130), Expect = 5e-08 Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 7/124 (5%) Frame = +2 Query: 44 FLFAPGAITFGLGTWQLFRRQDKVEMLEYRTRRLEMEPVAWNETVSSAXSRDPAVLEFRK 223 FL A TFGLG WQ+ R+ K ++++ ++L PVA + ++ D A +E+R Sbjct: 66 FLLLIPATTFGLGCWQVKRKIWKEQLIKDLNKQLSTAPVALPDDLT-----DLAQMEYRL 120 Query: 224 IVCEGDFDTEKSVFLGPRS--RSISGVTENGXYVITP-----LIPRPAESGSLQSPILVN 382 + G F +K + LGPRS R T+ G + LI P + +LVN Sbjct: 121 VKIRGRFLHDKEMRLGPRSLIRPDGVETQGGLFSQRDSGNGYLIVTPFQLADRDDIVLVN 180 Query: 383 RGWI 394 RGW+ Sbjct: 181 RGWV 184
>SURF1_HUMAN (Q15526) Surfeit locus protein 1| Length = 300 Score = 54.3 bits (129), Expect = 7e-08 Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 11/119 (9%) Frame = +2 Query: 71 FGLGTWQLFRRQDKVEMLEYRTRRLEMEPVAWNETVSSAXSRDPAVLEFRKIVCEGDFDT 250 FGLGTWQ+ RR+ K+ ++ R+ EPV A + LE+R + G FD Sbjct: 74 FGLGTWQVQRRKWKLNLIAELESRVLAEPVP-----LPADPMELKNLEYRPVKVRGCFDH 128 Query: 251 EKSVFLGPRSR-----------SISGVTENGXYVITPLIPRPAESGSLQSPILVNRGWI 394 K +++ PR+ IS T++G YV+TP L ILVNRG++ Sbjct: 129 SKELYMMPRTMVDPVREAREGGLISSSTQSGAYVVTPF-----HCTDLGVTILVNRGFV 182
>ATPG_OCEIH (Q8EM82) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 286 Score = 31.2 bits (69), Expect = 0.62 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Frame = -1 Query: 267 RKTDFSVSKS----PSHTIFRNSSTAGSREXAEETVSFHATGSISSLRVLYS 124 RK VSKS P H F A +E A ETV +A G I L ++Y+ Sbjct: 127 RKRGLPVSKSVLGVPDHPTF-----ADVKELASETVQMYADGDIDELNIIYN 173
>CX6A2_MOUSE (P43023) Cytochrome c oxidase polypeptide VIa-heart, mitochondrial| precursor (EC 1.9.3.1) (COXVIAH) Length = 97 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = +2 Query: 2 SARGGKEGGA----WSKL--FLFAPGAITFGLGTWQLFRRQDKVEMLEYRTRRLEMEPVA 163 SA G GGA W L L PG L W ++ E + Y R+ +P A Sbjct: 14 SAAKGDHGGAGANTWRLLTFVLALPGVALCSLNCWMHAGHHERPEFIPYHHLRIRTKPFA 73 Query: 164 WNE 172 W + Sbjct: 74 WGD 76
>HSH2D_BRARE (Q56A36) Hematopoietic SH2 domain-containing protein homolog| Length = 365 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/87 (21%), Positives = 38/87 (43%) Frame = -1 Query: 267 RKTDFSVSKSPSHTIFRNSSTAGSREXAEETVSFHATGSISSLRVLYSSISTLSCRRKSC 88 R+ ++ S + ++T+ N S + + H SL S+++ S + + Sbjct: 147 RQVEWISSSTATNTLQSNISEENQTSQLQNNSTSHPGRLYPSLETEVSALNIQSTDQPTK 206 Query: 87 HVPRPKVMAPGAKRKSFDHAPPSFPPR 7 VP+P+ + A + + PP PPR Sbjct: 207 PVPKPRTVF--ASKTPAEETPPQLPPR 231
>EX5B_CHLTR (O84645) Exodeoxyribonuclease V beta chain (EC 3.1.11.5)| Length = 1026 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = -1 Query: 303 SVTPEMLRERGPRKTDFSVSKSPSHTIFRNSSTAGSREXAE 181 S+TP+ RER P++T FS+ PS TI SST + +E Sbjct: 794 SLTPD--RERLPQQTYFSLPHLPSRTIHSFSSTVENLHFSE 832
>GTHB2_CLUPA (Q9YGH2) Gonadotropin beta-2 subunit precursor (Gonadotropin| beta-II chain) (GTH-II-beta) Length = 149 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +2 Query: 167 NETVSSAXSRDPAVLEFRKIVCEGDFDTEKSVFLGPRS 280 NETVS P L FR +C G T++ V+ P S Sbjct: 34 NETVSVEKEGCPRCLVFRTTICSGHCPTKEPVYKSPFS 71
>TASP1_HUMAN (Q9H6P5) Threonine aspartase 1 (EC 3.4.25.-) (Taspase-1) [Contains:| Threonine aspartase subunit alpha; Threonine aspartase subunit beta] Length = 420 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Frame = -1 Query: 180 ETVSFHATGSISSLRVLYSSISTLSC-----RRKSCHVPRPKVMAPGAKRKSFDHAPPSF 16 ++++F A G++S ++ S + L C + + +P ++ GA R + DH PS Sbjct: 123 KSLNFGAVGALSGIKNPVSVANRLLCEGQKGKLSAGRIPPCFLVGEGAYRWAVDHGIPSC 182 Query: 15 PP 10 PP Sbjct: 183 PP 184
>Y052_NEIMA (Q9JX59) UPF0059 membrane protein NMA0052| Length = 188 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +2 Query: 5 ARGGKEGGAWSKLFLFAPGAITFGLGTWQL 94 A GG GG + K FA G + +GTW L Sbjct: 151 AAGGALGGLFGKRAEFAGGLVLIAIGTWTL 180
>AROC1_LYCES (Q42884) Chorismate synthase 1, chloroplast precursor (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase 1) Length = 440 Score = 28.5 bits (62), Expect = 4.0 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 8/94 (8%) Frame = -1 Query: 363 CKLPDSAGRGINGVIT*XPFSVTPEMLRERGPRKTDFSVSKSPSHTIFR-------NSST 205 CK+ +G+ T P V +RG ++ S++ PSH S Sbjct: 118 CKISSGTA---DGLTTGSPIKVEVPNTDQRGNDYSEMSLAYRPSHADATYDFKYGVRSVQ 174 Query: 204 AGSREXAEETVSFHATGSIS-SLRVLYSSISTLS 106 G R A ET+ A G+++ + LYS L+ Sbjct: 175 GGGRSSARETIGRVAAGAVAKKILKLYSGAEVLA 208
>PIV6_ADE12 (P35988) Minor capsid protein 6 precursor (Minor capsid protein VI)| [Contains: Protease cofactor] Length = 265 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 5/73 (6%) Frame = -1 Query: 360 KLPDSAGRGINGVIT*XPFSVTPEMLRERGPRKTDFSVSKS--PSHTIFRNSSTAGS--- 196 K+ D GINGV+ +V ++ PR + V + P T+ + T G Sbjct: 79 KVVDGLASGINGVVDIANQAVQKKIANRLEPRPDEVMVEEKLPPLETVPGSVPTKGEKRP 138 Query: 195 REXAEETVSFHAT 157 R AEET+ H T Sbjct: 139 RPDAEETLVTHTT 151
>GTHB2_CLAGA (P53543) Gonadotropin beta-2 subunit precursor (Gonadotropin| beta-II chain) (GTH-II-beta) Length = 138 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +2 Query: 152 EPVAWNETVSSAXSRDPAVLEFRKIVCEGDFDTEKSVFLGPRS 280 EPV NETVS P L F+ +C G T++ V+ P S Sbjct: 28 EPV--NETVSVEKDGCPKCLAFQTSICSGHCFTKEPVYKSPFS 68
>HXB4_XENLA (P09070) Homeobox protein Hox-B4 (Xhox-1A)| Length = 232 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%) Frame = -1 Query: 126 SSISTLSCR---RKSCHVPRPKVMAPGAKRKSFDHAPPSFPP 10 SS S SC+ R+S +P + PG K H P S PP Sbjct: 58 SSASYSSCQGSVRQSARLPHSSGLVPGEKAHLEPHMPTSSPP 99
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = -3 Query: 283 PGARXEEDGLLRVEIALTHDLPELQHGRITRXSRGDGLVPRHG 155 PG + E GL E HD +QHGR + G P HG Sbjct: 612 PGVQAGEGGLHAGEAGRAHDGARVQHGRAELAAPG----PAHG 650
>AROC2_LYCES (Q42885) Chorismate synthase 2, chloroplast precursor (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase 2) Length = 431 Score = 28.1 bits (61), Expect = 5.3 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 8/94 (8%) Frame = -1 Query: 363 CKLPDSAGRGINGVIT*XPFSVTPEMLRERGPRKTDFSVSKSPSHTIFR-------NSST 205 CK+ +G+ T P V +RG ++ S++ PSH S Sbjct: 112 CKISSGTA---DGLTTGSPIKVEVPNTDQRGNDYSEMSLAYRPSHADATYDFKYGVRSVQ 168 Query: 204 AGSREXAEETVSFHATGSIS-SLRVLYSSISTLS 106 G R A ET+ A G+++ + LYS L+ Sbjct: 169 GGGRSSARETIGRVAAGAVAKKILKLYSGTEILA 202
>RLA3_LEIIN (Q06382) 60S acidic ribosomal protein P2-2| Length = 111 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +1 Query: 85 MAALPAAGQGRDAGVQDAEAGDGA 156 M+A+PAA G AGV + AGD A Sbjct: 63 MSAMPAASSGAAAGVTASAAGDAA 86
>TASP1_MOUSE (Q8R1G1) Threonine aspartase 1 (EC 3.4.25.-) (Taspase-1) [Contains:| Threonine aspartase subunit alpha; Threonine aspartase subunit beta] Length = 420 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Frame = -1 Query: 180 ETVSFHATGSISSLRVLYSSISTLSC-----RRKSCHVPRPKVMAPGAKRKSFDHAPPSF 16 ++++F A G++S ++ S L C + + +P ++ GA R + DH PS Sbjct: 123 KSLNFGAVGALSGIKNPVSVAHRLLCEGQKGKLSAGRIPPCFLVGEGAYRWAVDHGIPSC 182 Query: 15 PP 10 PP Sbjct: 183 PP 184
>PTPA1_USTMA (Q4P4W3) Serine/threonine-protein phosphatase 2A activator 1 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1) (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl phosphatase activator 1) Length = 487 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -1 Query: 93 SCHVPRPKVMAPGAKRKSFDHAPPSFPPRA 4 S VP P++ P A SFDH P PPR+ Sbjct: 434 SMGVPTPRITRPPATPDSFDH-PLRLPPRS 462
>GTHB2_ICTPU (Q9DG80) Gonadotropin beta-2 subunit precursor (Gonadotropin| beta-II chain) (GTH-II-beta) (GtH beta-2) Length = 140 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +2 Query: 152 EPVAWNETVSSAXSRDPAVLEFRKIVCEGDFDTEKSVFLGPRS 280 EPV NETVS P L F+ +C G T++ V+ P S Sbjct: 30 EPV--NETVSVEKDGCPKCLVFQTAICSGHCLTKEPVYKSPFS 70
>UTX_HUMAN (O15550) Ubiquitously transcribed X chromosome tetratricopeptide| repeat protein (Ubiquitously transcribed TPR protein on the X chromosome) Length = 1401 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -1 Query: 264 KTDFSVSKSPSHTIFRNSSTAGSREXAEETVSFHATGSISSLRVLYSSISTLS 106 KTD SV+ SPS I S+ S + E+T T S++SL +S + T++ Sbjct: 810 KTDNSVASSPSSAI---STATPSPKSTEQT----TTNSVTSLNSPHSGLHTIN 855
>SBCC_RHOCA (O68032) Nuclease sbcCD subunit C| Length = 1238 Score = 27.7 bits (60), Expect = 6.9 Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 10/90 (11%) Frame = +2 Query: 77 LGTWQLFRRQDKVE-MLEYRTRRL-EMEPVAWNETVSSAXSRDPAVL------EFRKIV- 229 + WQ R +DKVE L+ R L E + A S A L EFR+ V Sbjct: 109 IARWQARRARDKVEGKLQTVARSLARAEDGQVLAAQTQAVSEQVAALTGLSYEEFRRTVL 168 Query: 230 -CEGDFDTEKSVFLGPRSRSISGVTENGXY 316 +GDFD G R+ + VT G Y Sbjct: 169 LAQGDFDAFLRADTGERATLLEKVTGTGLY 198
>POLG_PEMVC (Q01500) Genome polyprotein [Contains: P1 proteinase (N-terminal| protein); Helper component proteinase (EC 3.4.22.45) (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2 (6K2); Viral ge Length = 3068 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +2 Query: 89 QLFRRQDKVEMLEYRTRRLEMEPVAWNETVSSAXSRDPAVLEFRK 223 +L+R++D L R E W+E S +PA+LEF K Sbjct: 1049 ELYRKEDTCHELYTALERKLGEKPTWDEYCSYVAKINPAMLEFIK 1093
>FLIP1_HUMAN (Q7Z7B0) Filamin-A-interacting protein 1 (FILIP)| Length = 1213 Score = 27.7 bits (60), Expect = 6.9 Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 8/126 (6%) Frame = -1 Query: 354 PDSAGRGINGVIT*XPFSVTPEMLRERGPRKTDFSVSKSPSHTIFRNSSTAGSREXAEET 175 P ++G G++ VIT P +VT E G +V +SP + + +S S+ + T Sbjct: 1079 PGTSGEGVSPVITVRPVNVTAEKEVSTG------TVLRSPRNHL--SSRPGASKVTSTIT 1130 Query: 174 VSFHATGSISSLRVLYSSISTLSCRRKSCHVP--------RPKVMAPGAKRKSFDHAPPS 19 ++ T S + + S S R +P +P V APGA + Sbjct: 1131 ITPVTTSSARGTQSV-SGQDGSSQRPTPTRIPMSKGMKAGKPVVAAPGAGNLT------K 1183 Query: 18 FPPRAE 1 F PRAE Sbjct: 1184 FEPRAE 1189
>UTX_MOUSE (O70546) Ubiquitously transcribed X chromosome tetratricopeptide| repeat protein (Ubiquitously transcribed TPR protein on the X chromosome) (Fragment) Length = 1333 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -1 Query: 264 KTDFSVSKSPSHTIFRNSSTAGSREXAEETVSFHATGSISSLRVLYSSISTLS 106 KTD SV+ SPS I S+ S + E+T T S++SL +S + T++ Sbjct: 742 KTDNSVASSPSSAI---STATPSPKSTEQT----TTNSVTSLNSPHSGLHTIN 787
>UTY_HUMAN (O14607) Ubiquitously transcribed Y chromosome tetratricopeptide| repeat protein (Ubiquitously transcribed TPR protein on the Y chromosome) Length = 1347 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/82 (26%), Positives = 38/82 (46%) Frame = -1 Query: 264 KTDFSVSKSPSHTIFRNSSTAGSREXAEETVSFHATGSISSLRVLYSSISTLSCRRKSCH 85 KTD SV+ SPS I +++T + + +++ S++SL +S + T++ Sbjct: 757 KTDHSVASSPSSAI--STATPSPKSTEQRSIN-----SVTSLNSPHSGLHTVNGEGLGKS 809 Query: 84 VPRPKVMAPGAKRKSFDHAPPS 19 KV P A +S PS Sbjct: 810 QSSTKVDLPLASHRSTSQILPS 831
>LEU3_CORDI (Q6NHM7) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 339 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = -3 Query: 307 IFRHTGDAPGARXEEDGLLRVEIALTHDLPELQHGRITRXSRGDGLV 167 + RH GD A+ R+E A+T+D+ E G + GD +V Sbjct: 295 LLRHVGDESNAQ-------RIEAAVTYDVAERPAGPVKTVEVGDRIV 334 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,531,789 Number of Sequences: 219361 Number of extensions: 913399 Number of successful extensions: 3120 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3030 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3104 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
