ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags23o22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 238 2e-59
2dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic D... 238 2e-59
3dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic D... 238 2e-59
4dbj|AK099940.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 2e-59
5dbj|AK099512.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 2e-59
6dbj|AK066664.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 2e-59
7dbj|AK065642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 2e-59
8dbj|AK099729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 3e-55
9gb|AY596530.1| Saccharum officinarum clone SCEPLR1051A06, comple... 214 3e-52
10ref|XM_468104.1| Oryza sativa (japonica cultivar-group), mRNA 74 6e-10
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
12dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
13dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
14dbj|AP005763.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.036
15gb|AC144640.3| Carollia perspicillata clone 14D2, complete sequence 42 2.2
16gb|AC012170.6|AC012170 Homo sapiens chromosome 15 clone RP11-562... 42 2.2
17gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 42 2.2
18emb|AL713980.9| Human DNA sequence from clone XXbac-81I18 on chr... 42 2.2
19emb|AL663038.7| Human DNA sequence from clone XXbac-47E12 on chr... 42 2.2
20gb|AC127354.4| Mus musculus BAC clone RP23-91C8 from chromosome ... 40 8.9
21gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete g... 40 8.9
22gb|BT013815.1| Lycopersicon esculentum clone 132736F, mRNA sequence 40 8.9
23emb|AJ720692.1| Gallus gallus mRNA for hypothetical protein, clo... 40 8.9
24ref|NM_001006484.1| Gallus gallus tetratricopeptide repeat domai... 40 8.9
25gb|AC110023.3| Homo sapiens chromosome 15, clone RP11-739G5, com... 40 8.9
26gb|AC090762.9| Homo sapiens chromosome 15, clone RP11-387E8, com... 40 8.9
27gb|DQ311364.1| Bombyx mori glycolipid transfer protein mRNA, com... 40 8.9
28gb|AC025470.5| Homo sapiens chromosome 5 clone CTD-2516K3, compl... 40 8.9
29gb|U53139.2| Caenorhabditis elegans cosmid F18E3, complete sequence 40 8.9
30gb|AC006560.8| Homo sapiens 12 BAC RPCI11-792F18 (Roswell Park C... 40 8.9
31gb|AC119253.7| Mus musculus chromosome 15, clone RP24-279A15, co... 40 8.9 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  238 bits (120), Expect = 2e-59
 Identities = 241/280 (86%), Gaps = 6/280 (2%)
 Strand = Plus / Minus

                                                                           
Query: 358     tcctagataggtctgagtcgtccaagtctaataactcagacgatgaggcacaccagttct 417
               ||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||||| |
Sbjct: 5049948 tcctagataggtccgagtcatcaaagtcaaataactcggatgatgaggcacaccagtttt 5049889

                                                                           
Query: 418     ggcgtaagcagcttccagatgatattattccagacttcacttcttttgagaaaatcgaac 477
               |||||||||||||||| ||||| |||||||||||||||| ||   |||||||||| ||||
Sbjct: 5049888 ggcgtaagcagcttcctgatgacattattccagacttcagtt---ttgagaaaattgaac 5049832

                                                                           
Query: 478     aagaacctgaagaattgtcccttgccgggttatccttgaatgcacctccattctatggga 537
               ||||||||||||||||||| ||||| || ||||||||||||||||| || |||||||| |
Sbjct: 5049831 aagaacctgaagaattgtctcttgctggattatccttgaatgcaccccctttctatggaa 5049772

                                                                           
Query: 538     caaaagctagccgcttgtcaagagaacaagagttgtcttcttcagctagcaa---ccttg 594
               ||| |||||||||||| |||||||| || || || ||||||  ||||| |||   ||| |
Sbjct: 5049771 caacagctagccgcttttcaagagagcatgatttatcttctcaagctaacaagagcctgg 5049712

                                                       
Query: 595     aacttgggcataccaatttattttacgaggataattcaca 634
               |||| |||| ||||| |||| |||| || |||||||||||
Sbjct: 5049711 aactggggcttaccagtttactttatgaagataattcaca 5049672



 Score =  101 bits (51), Expect = 3e-18
 Identities = 111/129 (86%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                           
Query: 150     acatgtaatttctgttaaaggatgacttcactgaataaagttgttccaaataatggtgat 209
               ||||||||||||| |||||  ||||||||||| |||||||||||| | |||   || |||
Sbjct: 5050146 acatgtaatttctattaaaa-atgacttcactcaataaagttgtttccaat---ggagat 5050091

                                                                           
Query: 210     gcgaggtcaatgttaccaaataaagtcactgcattaaatcccaatgcagcagagtttgtt 269
                | ||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| 
Sbjct: 5050090 acaaggtcaatgttgccaaataaagtcacagcattgaatcccaacgcagcagaatttgta 5050031

                        
Query: 270     ccttcatgt 278
               |||||||||
Sbjct: 5050030 ccttcatgt 5050022



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                    
Query: 484      ctgaagaattgtcccttgccgggttatccttgaatg 519
                |||||||||||||||||| |||||| ||||||||||
Sbjct: 15240564 ctgaagaattgtcccttggcgggtt-tccttgaatg 15240530
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>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OJ1147_D11
          Length = 138444

 Score =  238 bits (120), Expect = 2e-59
 Identities = 241/280 (86%), Gaps = 6/280 (2%)
 Strand = Plus / Minus

                                                                        
Query: 358  tcctagataggtctgagtcgtccaagtctaataactcagacgatgaggcacaccagttct 417
            ||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||||| |
Sbjct: 8986 tcctagataggtccgagtcatcaaagtcaaataactcggatgatgaggcacaccagtttt 8927

                                                                        
Query: 418  ggcgtaagcagcttccagatgatattattccagacttcacttcttttgagaaaatcgaac 477
            |||||||||||||||| ||||| |||||||||||||||| ||   |||||||||| ||||
Sbjct: 8926 ggcgtaagcagcttcctgatgacattattccagacttcagtt---ttgagaaaattgaac 8870

                                                                        
Query: 478  aagaacctgaagaattgtcccttgccgggttatccttgaatgcacctccattctatggga 537
            ||||||||||||||||||| ||||| || ||||||||||||||||| || |||||||| |
Sbjct: 8869 aagaacctgaagaattgtctcttgctggattatccttgaatgcaccccctttctatggaa 8810

                                                                        
Query: 538  caaaagctagccgcttgtcaagagaacaagagttgtcttcttcagctagcaa---ccttg 594
            ||| |||||||||||| |||||||| || || || ||||||  ||||| |||   ||| |
Sbjct: 8809 caacagctagccgcttttcaagagagcatgatttatcttctcaagctaacaagagcctgg 8750

                                                    
Query: 595  aacttgggcataccaatttattttacgaggataattcaca 634
            |||| |||| ||||| |||| |||| || |||||||||||
Sbjct: 8749 aactggggcttaccagtttactttatgaagataattcaca 8710



 Score =  101 bits (51), Expect = 3e-18
 Identities = 111/129 (86%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                        
Query: 150  acatgtaatttctgttaaaggatgacttcactgaataaagttgttccaaataatggtgat 209
            ||||||||||||| |||||  ||||||||||| |||||||||||| | |||   || |||
Sbjct: 9184 acatgtaatttctattaaaa-atgacttcactcaataaagttgtttccaat---ggagat 9129

                                                                        
Query: 210  gcgaggtcaatgttaccaaataaagtcactgcattaaatcccaatgcagcagagtttgtt 269
             | ||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| 
Sbjct: 9128 acaaggtcaatgttgccaaataaagtcacagcattgaatcccaacgcagcagaatttgta 9069

                     
Query: 270  ccttcatgt 278
            |||||||||
Sbjct: 9068 ccttcatgt 9060
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>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1172G12
          Length = 171974

 Score =  238 bits (120), Expect = 2e-59
 Identities = 241/280 (86%), Gaps = 6/280 (2%)
 Strand = Plus / Minus

                                                                         
Query: 358   tcctagataggtctgagtcgtccaagtctaataactcagacgatgaggcacaccagttct 417
             ||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||||| |
Sbjct: 92062 tcctagataggtccgagtcatcaaagtcaaataactcggatgatgaggcacaccagtttt 92003

                                                                         
Query: 418   ggcgtaagcagcttccagatgatattattccagacttcacttcttttgagaaaatcgaac 477
             |||||||||||||||| ||||| |||||||||||||||| ||   |||||||||| ||||
Sbjct: 92002 ggcgtaagcagcttcctgatgacattattccagacttcagtt---ttgagaaaattgaac 91946

                                                                         
Query: 478   aagaacctgaagaattgtcccttgccgggttatccttgaatgcacctccattctatggga 537
             ||||||||||||||||||| ||||| || ||||||||||||||||| || |||||||| |
Sbjct: 91945 aagaacctgaagaattgtctcttgctggattatccttgaatgcaccccctttctatggaa 91886

                                                                         
Query: 538   caaaagctagccgcttgtcaagagaacaagagttgtcttcttcagctagcaa---ccttg 594
             ||| |||||||||||| |||||||| || || || ||||||  ||||| |||   ||| |
Sbjct: 91885 caacagctagccgcttttcaagagagcatgatttatcttctcaagctaacaagagcctgg 91826

                                                     
Query: 595   aacttgggcataccaatttattttacgaggataattcaca 634
             |||| |||| ||||| |||| |||| || |||||||||||
Sbjct: 91825 aactggggcttaccagtttactttatgaagataattcaca 91786



 Score =  101 bits (51), Expect = 3e-18
 Identities = 111/129 (86%), Gaps = 4/129 (3%)
 Strand = Plus / Minus

                                                                         
Query: 150   acatgtaatttctgttaaaggatgacttcactgaataaagttgttccaaataatggtgat 209
             ||||||||||||| |||||  ||||||||||| |||||||||||| | |||   || |||
Sbjct: 92260 acatgtaatttctattaaaa-atgacttcactcaataaagttgtttccaat---ggagat 92205

                                                                         
Query: 210   gcgaggtcaatgttaccaaataaagtcactgcattaaatcccaatgcagcagagtttgtt 269
              | ||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| 
Sbjct: 92204 acaaggtcaatgttgccaaataaagtcacagcattgaatcccaacgcagcagaatttgta 92145

                      
Query: 270   ccttcatgt 278
             |||||||||
Sbjct: 92144 ccttcatgt 92136
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>dbj|AK099940.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120N16, full
           insert sequence
          Length = 2140

 Score =  238 bits (120), Expect = 2e-59
 Identities = 241/280 (86%), Gaps = 6/280 (2%)
 Strand = Plus / Plus

                                                                       
Query: 358 tcctagataggtctgagtcgtccaagtctaataactcagacgatgaggcacaccagttct 417
           ||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||||| |
Sbjct: 510 tcctagataggtccgagtcatcaaagtcaaataactcggatgatgaggcacaccagtttt 569

                                                                       
Query: 418 ggcgtaagcagcttccagatgatattattccagacttcacttcttttgagaaaatcgaac 477
           |||||||||||||||| ||||| |||||||||||||||| ||   |||||||||| ||||
Sbjct: 570 ggcgtaagcagcttcctgatgacattattccagacttcagtt---ttgagaaaattgaac 626

                                                                       
Query: 478 aagaacctgaagaattgtcccttgccgggttatccttgaatgcacctccattctatggga 537
           ||||||||||||||||||| ||||| || ||||||||||||||||| || |||||||| |
Sbjct: 627 aagaacctgaagaattgtctcttgctggattatccttgaatgcaccccctttctatggaa 686

                                                                       
Query: 538 caaaagctagccgcttgtcaagagaacaagagttgtcttcttcagctagcaa---ccttg 594
           ||| |||||||||||| |||||||| || || || ||||||  ||||| |||   ||| |
Sbjct: 687 caacagctagccgcttttcaagagagcatgatttatcttctcaagctaacaagagcctgg 746

                                                   
Query: 595 aacttgggcataccaatttattttacgaggataattcaca 634
           |||| |||| ||||| |||| |||| || |||||||||||
Sbjct: 747 aactggggcttaccagtttactttatgaagataattcaca 786



 Score =  101 bits (51), Expect = 3e-18
 Identities = 111/129 (86%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                       
Query: 150 acatgtaatttctgttaaaggatgacttcactgaataaagttgttccaaataatggtgat 209
           ||||||||||||| |||||  ||||||||||| |||||||||||| | |||   || |||
Sbjct: 312 acatgtaatttctattaaaa-atgacttcactcaataaagttgtttccaat---ggagat 367

                                                                       
Query: 210 gcgaggtcaatgttaccaaataaagtcactgcattaaatcccaatgcagcagagtttgtt 269
            | ||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| 
Sbjct: 368 acaaggtcaatgttgccaaataaagtcacagcattgaatcccaacgcagcagaatttgta 427

                    
Query: 270 ccttcatgt 278
           |||||||||
Sbjct: 428 ccttcatgt 436
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>dbj|AK099512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029I07, full
            insert sequence
          Length = 3180

 Score =  238 bits (120), Expect = 2e-59
 Identities = 241/280 (86%), Gaps = 6/280 (2%)
 Strand = Plus / Plus

                                                                        
Query: 358  tcctagataggtctgagtcgtccaagtctaataactcagacgatgaggcacaccagttct 417
            ||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||||| |
Sbjct: 1551 tcctagataggtccgagtcatcaaagtcaaataactcggatgatgaggcacaccagtttt 1610

                                                                        
Query: 418  ggcgtaagcagcttccagatgatattattccagacttcacttcttttgagaaaatcgaac 477
            |||||||||||||||| ||||| |||||||||||||||| ||   |||||||||| ||||
Sbjct: 1611 ggcgtaagcagcttcctgatgacattattccagacttcagtt---ttgagaaaattgaac 1667

                                                                        
Query: 478  aagaacctgaagaattgtcccttgccgggttatccttgaatgcacctccattctatggga 537
            ||||||||||||||||||| ||||| || ||||||||||||||||| || |||||||| |
Sbjct: 1668 aagaacctgaagaattgtctcttgctggattatccttgaatgcaccccctttctatggaa 1727

                                                                        
Query: 538  caaaagctagccgcttgtcaagagaacaagagttgtcttcttcagctagcaa---ccttg 594
            ||| |||||||||||| |||||||| || || || ||||||  ||||| |||   ||| |
Sbjct: 1728 caacagctagccgcttttcaagagagcatgatttatcttctcaagctaacaagagcctgg 1787

                                                    
Query: 595  aacttgggcataccaatttattttacgaggataattcaca 634
            |||| |||| ||||| |||| |||| || |||||||||||
Sbjct: 1788 aactggggcttaccagtttactttatgaagataattcaca 1827



 Score =  101 bits (51), Expect = 3e-18
 Identities = 111/129 (86%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                        
Query: 150  acatgtaatttctgttaaaggatgacttcactgaataaagttgttccaaataatggtgat 209
            ||||||||||||| |||||  ||||||||||| |||||||||||| | |||   || |||
Sbjct: 1353 acatgtaatttctattaaaa-atgacttcactcaataaagttgtttccaat---ggagat 1408

                                                                        
Query: 210  gcgaggtcaatgttaccaaataaagtcactgcattaaatcccaatgcagcagagtttgtt 269
             | ||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| 
Sbjct: 1409 acaaggtcaatgttgccaaataaagtcacagcattgaatcccaacgcagcagaatttgta 1468

                     
Query: 270  ccttcatgt 278
            |||||||||
Sbjct: 1469 ccttcatgt 1477
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>dbj|AK066664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072I01, full
            insert sequence
          Length = 2402

 Score =  238 bits (120), Expect = 2e-59
 Identities = 241/280 (86%), Gaps = 6/280 (2%)
 Strand = Plus / Plus

                                                                        
Query: 358  tcctagataggtctgagtcgtccaagtctaataactcagacgatgaggcacaccagttct 417
            ||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||||| |
Sbjct: 772  tcctagataggtccgagtcatcaaagtcaaataactcggatgatgaggcacaccagtttt 831

                                                                        
Query: 418  ggcgtaagcagcttccagatgatattattccagacttcacttcttttgagaaaatcgaac 477
            |||||||||||||||| ||||| |||||||||||||||| ||   |||||||||| ||||
Sbjct: 832  ggcgtaagcagcttcctgatgacattattccagacttcagtt---ttgagaaaattgaac 888

                                                                        
Query: 478  aagaacctgaagaattgtcccttgccgggttatccttgaatgcacctccattctatggga 537
            ||||||||||||||||||| ||||| || ||||||||||||||||| || |||||||| |
Sbjct: 889  aagaacctgaagaattgtctcttgctggattatccttgaatgcaccccctttctatggaa 948

                                                                        
Query: 538  caaaagctagccgcttgtcaagagaacaagagttgtcttcttcagctagcaa---ccttg 594
            ||| |||||||||||| |||||||| || || || ||||||  ||||| |||   ||| |
Sbjct: 949  caacagctagccgcttttcaagagagcatgatttatcttctcaagctaacaagagcctgg 1008

                                                    
Query: 595  aacttgggcataccaatttattttacgaggataattcaca 634
            |||| |||| ||||| |||| |||| || |||||||||||
Sbjct: 1009 aactggggcttaccagtttactttatgaagataattcaca 1048



 Score =  101 bits (51), Expect = 3e-18
 Identities = 111/129 (86%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                       
Query: 150 acatgtaatttctgttaaaggatgacttcactgaataaagttgttccaaataatggtgat 209
           ||||||||||||| |||||  ||||||||||| |||||||||||| | |||   || |||
Sbjct: 574 acatgtaatttctattaaaa-atgacttcactcaataaagttgtttccaat---ggagat 629

                                                                       
Query: 210 gcgaggtcaatgttaccaaataaagtcactgcattaaatcccaatgcagcagagtttgtt 269
            | ||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| 
Sbjct: 630 acaaggtcaatgttgccaaataaagtcacagcattgaatcccaacgcagcagaatttgta 689

                    
Query: 270 ccttcatgt 278
           |||||||||
Sbjct: 690 ccttcatgt 698
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>dbj|AK065642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037H08, full
            insert sequence
          Length = 2769

 Score =  238 bits (120), Expect = 2e-59
 Identities = 241/280 (86%), Gaps = 6/280 (2%)
 Strand = Plus / Plus

                                                                        
Query: 358  tcctagataggtctgagtcgtccaagtctaataactcagacgatgaggcacaccagttct 417
            ||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||||| |
Sbjct: 1140 tcctagataggtccgagtcatcaaagtcaaataactcggatgatgaggcacaccagtttt 1199

                                                                        
Query: 418  ggcgtaagcagcttccagatgatattattccagacttcacttcttttgagaaaatcgaac 477
            |||||||||||||||| ||||| |||||||||||||||| ||   |||||||||| ||||
Sbjct: 1200 ggcgtaagcagcttcctgatgacattattccagacttcagtt---ttgagaaaattgaac 1256

                                                                        
Query: 478  aagaacctgaagaattgtcccttgccgggttatccttgaatgcacctccattctatggga 537
            ||||||||||||||||||| ||||| || ||||||||||||||||| || |||||||| |
Sbjct: 1257 aagaacctgaagaattgtctcttgctggattatccttgaatgcaccccctttctatggaa 1316

                                                                        
Query: 538  caaaagctagccgcttgtcaagagaacaagagttgtcttcttcagctagcaa---ccttg 594
            ||| |||||||||||| |||||||| || || || ||||||  ||||| |||   ||| |
Sbjct: 1317 caacagctagccgcttttcaagagagcatgatttatcttctcaagctaacaagagcctgg 1376

                                                    
Query: 595  aacttgggcataccaatttattttacgaggataattcaca 634
            |||| |||| ||||| |||| |||| || |||||||||||
Sbjct: 1377 aactggggcttaccagtttactttatgaagataattcaca 1416



 Score =  101 bits (51), Expect = 3e-18
 Identities = 111/129 (86%), Gaps = 4/129 (3%)
 Strand = Plus / Plus

                                                                        
Query: 150  acatgtaatttctgttaaaggatgacttcactgaataaagttgttccaaataatggtgat 209
            ||||||||||||| |||||  ||||||||||| |||||||||||| | |||   || |||
Sbjct: 942  acatgtaatttctattaaaa-atgacttcactcaataaagttgtttccaat---ggagat 997

                                                                        
Query: 210  gcgaggtcaatgttaccaaataaagtcactgcattaaatcccaatgcagcagagtttgtt 269
             | ||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| 
Sbjct: 998  acaaggtcaatgttgccaaataaagtcacagcattgaatcccaacgcagcagaatttgta 1057

                     
Query: 270  ccttcatgt 278
            |||||||||
Sbjct: 1058 ccttcatgt 1066
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>dbj|AK099729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089L07, full
           insert sequence
          Length = 2519

 Score =  224 bits (113), Expect = 3e-55
 Identities = 241/281 (85%), Gaps = 7/281 (2%)
 Strand = Plus / Plus

                                                                       
Query: 358 tcctagataggtctgagtcgtccaagtctaataactcagacgatgaggcacaccagttct 417
           ||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||||| |
Sbjct: 76  tcctagataggtccgagtcatcaaagtcaaataactcggatgatgaggcacaccagtttt 135

                                                                       
Query: 418 ggcgtaagcagcttccagatgatattattccagacttcacttcttttgagaaaatcgaac 477
           |||||||||||||||| ||||| ||||||||||||||||    |||||||||||| ||||
Sbjct: 136 ggcgtaagcagcttcctgatgacattattccagacttca---gttttgagaaaattgaac 192

                                                                       
Query: 478 aagaacctgaagaattgtcccttgccgggttatccttgaatgcacctccattctatggga 537
           ||||||||||||||||||| ||||| || ||||||||||||||||| || |||||||| |
Sbjct: 193 aagaacctgaagaattgtctcttgctggattatccttgaatgcaccccctttctatggaa 252

                                                                       
Query: 538 caaaag-ctagccgcttgtcaagagaacaagagttgtcttcttcagctagcaa---cctt 593
           ||| || |||||||||| |||||||| || || || ||||||  ||||| |||   ||| 
Sbjct: 253 caacagcctagccgcttttcaagagagcatgatttatcttctcaagctaacaagagcctg 312

                                                    
Query: 594 gaacttgggcataccaatttattttacgaggataattcaca 634
           ||||| |||| ||||| |||| |||| || |||||||||||
Sbjct: 313 gaactggggcttaccagtttactttatgaagataattcaca 353
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>gb|AY596530.1| Saccharum officinarum clone SCEPLR1051A06, complete sequence
          Length = 2542

 Score =  214 bits (108), Expect = 3e-52
 Identities = 198/228 (86%)
 Strand = Plus / Plus

                                                                       
Query: 358 tcctagataggtctgagtcgtccaagtctaataactcagacgatgaggcacaccagttct 417
           ||||||||||||| ||||| || |||||||||||||| || ||||||||||||||||| |
Sbjct: 515 tcctagataggtccgagtcatcaaagtctaataactcggatgatgaggcacaccagtttt 574

                                                                       
Query: 418 ggcgtaagcagcttccagatgatattattccagacttcacttcttttgagaaaatcgaac 477
           ||||||||||||| || ||||| |||||||||||||||||||||||||||||| | ||||
Sbjct: 575 ggcgtaagcagctacccgatgacattattccagacttcacttcttttgagaaagttgaac 634

                                                                       
Query: 478 aagaacctgaagaattgtcccttgccgggttatccttgaatgcacctccattctatggga 537
           |||  ||||||||| |||||||||| || || ||||||||||| || || || |||||||
Sbjct: 635 aagggcctgaagaactgtcccttgctggattgtccttgaatgcgccccccttttatggga 694

                                                           
Query: 538 caaaagctagccgcttgtcaagagaacaagagttgtcttcttcagcta 585
           ||| | | || ||||| ||||||||||| || || |||||| ||||||
Sbjct: 695 caacatccagtcgcttctcaagagaacatgaattatcttctccagcta 742



 Score =  113 bits (57), Expect = 7e-22
 Identities = 114/132 (86%), Gaps = 2/132 (1%)
 Strand = Plus / Plus

                                                                       
Query: 151 catgtaatttctgttaaaggatgacttcactgaataaagttgttccaaataatggtgatg 210
           |||||||||||||| ||  ||||| |||||| |||||||||||| |||||| ||| ||||
Sbjct: 313 catgtaatttctgtaaa--gatgagttcactaaataaagttgtttcaaatagtggagatg 370

                                                                       
Query: 211 cgaggtcaatgttaccaaataaagtcactgcattaaatcccaatgcagcagagtttgttc 270
           || | ||| ||||||| | |||||||||  ||||||||||||||||||| |||||||| |
Sbjct: 371 cgtgttcagtgttacctagtaaagtcacgtcattaaatcccaatgcagcggagtttgtac 430

                       
Query: 271 cttcatgtgtta 282
           |||||| |||||
Sbjct: 431 cttcatttgtta 442
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>ref|XM_468104.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1518

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 384 tctaataactcagacgatgaggcacaccagttctggcgtaagcagcttccagatgatatt 443
           ||||||||||| || |||||  |||||||||| |||| ||  |||||||| |||||||||
Sbjct: 268 tctaataactcggatgatgaaacacaccagttttggcatagacagcttcctgatgatatt 327

                        
Query: 444 attccagacttca 456
           |||||||||||||
Sbjct: 328 attccagacttca 340



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 244 taaatcccaatgcagcagagtttgttccttca 275
           ||||||| ||||||||||| ||||| ||||||
Sbjct: 131 taaatccaaatgcagcagaatttgtcccttca 162
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                            
Query: 384      tctaataactcagacgatgaggcacaccagttctggcgtaagcagcttccagatgatatt 443
                ||||||||||| || |||||  |||||||||| |||| ||  |||||||| |||||||||
Sbjct: 33087515 tctaataactcggatgatgaaacacaccagttttggcatagacagcttcctgatgatatt 33087574

                             
Query: 444      attccagacttca 456
                |||||||||||||
Sbjct: 33087575 attccagacttca 33087587



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 244      taaatcccaatgcagcagagtttgttccttca 275
                ||||||| ||||||||||| ||||| ||||||
Sbjct: 33087378 taaatccaaatgcagcagaatttgtcccttca 33087409
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>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1293_A01
          Length = 139121

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                          
Query: 384    tctaataactcagacgatgaggcacaccagttctggcgtaagcagcttccagatgatatt 443
              ||||||||||| || |||||  |||||||||| |||| ||  |||||||| |||||||||
Sbjct: 133455 tctaataactcggatgatgaaacacaccagttttggcatagacagcttcctgatgatatt 133514

                           
Query: 444    attccagacttca 456
              |||||||||||||
Sbjct: 133515 attccagacttca 133527



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 244    taaatcccaatgcagcagagtttgttccttca 275
              ||||||| ||||||||||| ||||| ||||||
Sbjct: 133318 taaatccaaatgcagcagaatttgtcccttca 133349
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>dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1369_G08
          Length = 104190

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                        
Query: 384  tctaataactcagacgatgaggcacaccagttctggcgtaagcagcttccagatgatatt 443
            ||||||||||| || |||||  |||||||||| |||| ||  |||||||| |||||||||
Sbjct: 3175 tctaataactcggatgatgaaacacaccagttttggcatagacagcttcctgatgatatt 3234

                         
Query: 444  attccagacttca 456
            |||||||||||||
Sbjct: 3235 attccagacttca 3247



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 244  taaatcccaatgcagcagagtttgttccttca 275
            ||||||| ||||||||||| ||||| ||||||
Sbjct: 3038 taaatccaaatgcagcagaatttgtcccttca 3069
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>dbj|AP005763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0015G09
          Length = 140893

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                  
Query: 484    ctgaagaattgtcccttgccgggttatccttgaatg 519
              |||||||||||||||||| |||||| ||||||||||
Sbjct: 115078 ctgaagaattgtcccttggcgggtt-tccttgaatg 115044
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>gb|AC144640.3| Carollia perspicillata clone 14D2, complete sequence
          Length = 116172

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 441   attattccagacttcacttcttttg 465
             ||||||||| |||||||||||||||
Sbjct: 73750 attattccaaacttcacttcttttg 73774
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>gb|AC012170.6|AC012170 Homo sapiens chromosome 15 clone RP11-562A8 map 15q21.1, complete
              sequence
          Length = 198550

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 164    ttaaaggatgacttcactgaa 184
              |||||||||||||||||||||
Sbjct: 105464 ttaaaggatgacttcactgaa 105444
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 441    attattccagacttcacttcttttg 465
              ||||||||| |||||||||||||||
Sbjct: 890166 attattccaaacttcacttcttttg 890190
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>emb|AL713980.9| Human DNA sequence from clone XXbac-81I18 on chromosome 6, complete
             sequence
          Length = 123817

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 164   ttaaaggatgacttcactgaa 184
             |||||||||||||||||||||
Sbjct: 98066 ttaaaggatgacttcactgaa 98046
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>emb|AL663038.7| Human DNA sequence from clone XXbac-47E12 on chromosome 6, complete
             sequence
          Length = 151964

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 164   ttaaaggatgacttcactgaa 184
             |||||||||||||||||||||
Sbjct: 20104 ttaaaggatgacttcactgaa 20084
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>gb|AC127354.4| Mus musculus BAC clone RP23-91C8 from chromosome 6, complete sequence
          Length = 197318

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    gtttgttccttcatgtgtta 282
              ||||||||||||||||||||
Sbjct: 177126 gtttgttccttcatgtgtta 177107
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>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome
          Length = 2314078

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 438     gatattattccagacttcac 457
               ||||||||||||||||||||
Sbjct: 2150189 gatattattccagacttcac 2150208
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>gb|BT013815.1| Lycopersicon esculentum clone 132736F, mRNA sequence
          Length = 2896

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 558 agagaacaagagttgtcttcttca 581
           |||||| |||||||||||||||||
Sbjct: 87  agagaaaaagagttgtcttcttca 110
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>emb|AJ720692.1| Gallus gallus mRNA for hypothetical protein, clone 23i23
          Length = 3474

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 573 tcttcttcagctagcaacct 592
           ||||||||||||||||||||
Sbjct: 619 tcttcttcagctagcaacct 638
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>ref|NM_001006484.1| Gallus gallus tetratricopeptide repeat domain 7B (TTC7B), mRNA
          Length = 3474

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 573 tcttcttcagctagcaacct 592
           ||||||||||||||||||||
Sbjct: 619 tcttcttcagctagcaacct 638
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>gb|AC110023.3| Homo sapiens chromosome 15, clone RP11-739G5, complete sequence
          Length = 166975

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    aaataaagtcactgcattaa 246
              ||||||||||||||||||||
Sbjct: 128557 aaataaagtcactgcattaa 128576
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>gb|AC090762.9| Homo sapiens chromosome 15, clone RP11-387E8, complete sequence
          Length = 192826

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   aaataaagtcactgcattaa 246
             ||||||||||||||||||||
Sbjct: 99003 aaataaagtcactgcattaa 99022
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>gb|DQ311364.1| Bombyx mori glycolipid transfer protein mRNA, complete cds
          Length = 1870

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 226  caaataaagtcactgcatta 245
            ||||||||||||||||||||
Sbjct: 1187 caaataaagtcactgcatta 1206
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>gb|AC025470.5| Homo sapiens chromosome 5 clone CTD-2516K3, complete sequence
          Length = 201687

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 589   accttgaacttgggcatacc 608
             ||||||||||||||||||||
Sbjct: 89605 accttgaacttgggcatacc 89624
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>gb|U53139.2| Caenorhabditis elegans cosmid F18E3, complete sequence
          Length = 23138

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 449   agacttcacttcttttgagaaaat 472
             ||||||||| ||||||||||||||
Sbjct: 17261 agacttcacctcttttgagaaaat 17284
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>gb|AC006560.8| Homo sapiens 12 BAC RPCI11-792F18 (Roswell Park Cancer Institute
            Human BAC Library) complete sequence
          Length = 202478

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   gacctggacagccagggttt 118
            ||||||||||||||||||||
Sbjct: 9598 gacctggacagccagggttt 9579
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>gb|AC119253.7| Mus musculus chromosome 15, clone RP24-279A15, complete sequence
          Length = 163503

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   ggacagccagggtttgggta 123
             ||||||||||||||||||||
Sbjct: 72001 ggacagccagggtttgggta 72020


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,890,238
Number of Sequences: 3902068
Number of extensions: 5890238
Number of successful extensions: 124995
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124765
Number of HSP's gapped (non-prelim): 206
length of query: 650
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 627
effective length of database: 17,143,297,704
effective search space: 10748847660408
effective search space used: 10748847660408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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