>NU5M_BALPH (P24978) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 606

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = +1

Query: 61  IXSSHGGHREANKQQTNRKNI**FACVTSLIPSI*EVSVTVSFGTSMEVYINTFHMI 231
           I  SH G    NK Q+  KNI   A +TSL+P++      V   T+ E  I+ +H I
Sbjct: 19  IMMSHTGSHVNNKYQSYVKNIVFCAFITSLVPAM------VYLHTNQETLISNWHWI 69

>SORC3_HUMAN (Q9UPU3) VPS10 domain-containing receptor SorCS3 precursor|
          Length = 1222

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
 Frame = +3

Query: 150 YPFHLGSICYCQLWNK--YGSIYKHLSHDFSIRSNICYYTHPYMNMNVKHTSTCLDLHSP 323
           Y F+LGS+    LW    YG+ Y+ L+    +++ +      Y+ +N  +    + L  P
Sbjct: 218 YDFNLGSVTESSLWRSTDYGTTYEKLNDKVGLKTVL-----SYLYVNPTNKRKIMLLSDP 272

Query: 324 LRNMDIYSFSSE-IIYYKWRILLCSMSIFVFP 416
                I   S E   Y K+R+     S+   P
Sbjct: 273 EMESSILISSDEGATYQKYRLTFYIQSLLFHP 304

>SORC3_MOUSE (Q8VI51) VPS10 domain-containing receptor SorCS3 precursor|
          Length = 1219

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
 Frame = +3

Query: 150 YPFHLGSICYCQLWNK--YGSIYKHLSHDFSIRSNICYYTHPYMNMNVKHTSTCLDLHSP 323
           Y F+LGS+    LW    YG+ Y+ L+    +++ + Y    Y+N   K     L     
Sbjct: 215 YDFNLGSVTESSLWRSVDYGATYEKLNDKVGLKTVLSYL---YVNPTNKRKIMLLS-DPE 270

Query: 324 LRNMDIYSFSSEIIYYKWRILLCSMSIFVFP 416
           + +  + S      Y K+R+     S+   P
Sbjct: 271 MESSVLISSDEGATYQKYRLTFYIQSLLFHP 301

>Y420_MYCPN (P75367) Hypothetical protein MG293 homolog (A05_orf241a)|
          Length = 241

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 249 ICYYTHPYMNMNVKHTSTCLDLHSPLRNMDIYSFSSEIIYYKWR 380
           +C Y HP+ N+  K     L L  PL    +++ +SE+ ++++R
Sbjct: 185 VCQYLHPWTNIYEKFPDMVLSLQLPL---GLWTLNSEVKFHQFR 225


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,359,022
Number of Sequences: 219361
Number of extensions: 2072437
Number of successful extensions: 3993
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3992
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7309604013
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)