| Clone Name | bags23o06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196865.1| Oryza sativa (japonica cultivar-group) putative stress inducible protein (OSJNBa0042E19.1), mRNA Length = 1493 Score = 492 bits (248), Expect = e-136 Identities = 425/484 (87%) Strand = Plus / Plus Query: 48 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 107 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 581 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 640 Query: 108 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 167 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 641 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 700 Query: 168 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 227 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 701 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 760 Query: 228 atctttccgcgaaagacttgcaggaacaagtgagaagtggtgagggaagcgctactgaac 287 ||||||| || ||||| |||||||||||||||||||||||||| | ||| |||||||| Sbjct: 761 atctttctgccaaagagttgcaggaacaagtgagaagtggtgatgcaagtgctactgagt 820 Query: 288 tttttgagcttggagcggtcatgctccggcgaaagttttaccctgcagctatcaaatatc 347 ||||||||||||||| |||||||| ||| |||| ||||||||||| ||||||||||||| Sbjct: 821 attttgagcttggagcagtcatgctacggagaaaattttaccctgctgctatcaaatatc 880 Query: 348 tacagcaagcaatccaaaaatgggatagagatgagcaagatctcgcacaggtgtacaatg 407 |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 881 tacagcaagcaatccaaaaatgggatagggatgagcaagatcttgcacaggtatacaatg 940 Query: 408 ccctgggggttagctacaagcgagagaacaaactggacaaggcaatcaagcaattcgaga 467 ||||||| || |||||||||||||| |||||||| |||||| | ||| ||||||| |||| Sbjct: 941 ccctgggagtcagctacaagcgagataacaaacttgacaagtcgatccagcaatttgaga 1000 Query: 468 aggctgtggagctccaaccgggctatgtgacggcatggaacaacctaggcgacgcgtatg 527 ||||||| ||||| || || ||||||||||| || ||||||||||| || ||||| |||| Sbjct: 1001 aggctgttgagcttcagccaggctatgtgacagcttggaacaacctcggggacgcatatg 1060 Query: 528 agca 531 |||| Sbjct: 1061 agca 1064
>ref|XM_481822.1| Oryza sativa (japonica cultivar-group), mRNA Length = 390 Score = 404 bits (204), Expect = e-109 Identities = 315/352 (89%) Strand = Plus / Plus Query: 48 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 107 ||||||| ||||||||||| |||||||| ||||||||||| ||| ||||| ||||||| Sbjct: 5 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatttaaacatggttt 64 Query: 108 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 167 | ||||| ||||| || |||||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 65 atgaggttggggaactattcgagcttggaattcagttgtcttatcttctcatactacttg 124 Query: 168 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 227 | ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 125 gtctgcttggagctggtacatttttcgtcatccgtcaggttcttgtccgcagagagcttg 184 Query: 228 atctttccgcgaaagacttgcaggaacaagtgagaagtggtgagggaagcgctactgaac 287 ||||||| || ||||| |||||||||||||||||||||||||| | ||| |||||||| Sbjct: 185 atctttctgccaaagatttgcaggaacaagtgagaagtggtgatgcaagtgctactgagt 244 Query: 288 tttttgagcttggagcggtcatgctccggcgaaagttttaccctgcagctatcaaatatc 347 ||||||||| ||||| |||||||| ||| |||| ||||||||||| ||||||||||||| Sbjct: 245 attttgagctgggagcagtcatgctacggagaaaattttaccctgccgctatcaaatatc 304 Query: 348 tacagcaagcaatccaaaaatgggatagagatgagcaagatctcgcacaggt 399 ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 305 tacagcaagcaatccaaaaatgggatagagatgagcaagatcttgcacaggt 356
>ref|NM_196870.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0042E19.3), mRNA Length = 960 Score = 381 bits (192), Expect = e-102 Identities = 312/352 (88%) Strand = Plus / Plus Query: 48 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 107 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 581 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 640 Query: 108 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 167 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 641 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 700 Query: 168 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 227 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 701 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 760 Query: 228 atctttccgcgaaagacttgcaggaacaagtgagaagtggtgagggaagcgctactgaac 287 ||||||| || ||||| |||||||||||||||||||||||||| | ||| |||||||| Sbjct: 761 atctttctgccaaagagttgcaggaacaagtgagaagtggtgatgcaagtgctactgagt 820 Query: 288 tttttgagcttggagcggtcatgctccggcgaaagttttaccctgcagctatcaaatatc 347 ||||||||||||||| |||||||| ||| |||| ||||||||||| ||||||||||||| Sbjct: 821 attttgagcttggagcagtcatgctacggagaaaattttaccctgctgctatcaaatatc 880 Query: 348 tacagcaagcaatccaaaaatgggatagagatgagcaagatctcgcacaggt 399 ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 881 tacagcaagcaatccaaaaatgggatagagatgagcaagatcttgcacaggt 932
>dbj|AK072202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158D14, full insert sequence Length = 1895 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Plus Query: 48 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 107 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 564 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 623 Query: 108 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 167 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 624 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 683 Query: 168 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 227 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 684 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 743 Query: 228 atctttccgcgaaagacttgcaggaacaagtgagaagtggtgagggaagcgctactgaac 287 ||||||| || ||||| |||||||||||||||||||||||||| | ||| |||||||| Sbjct: 744 atctttctgccaaagagttgcaggaacaagtgagaagtggtgatgcaagtgctactgagt 803 Query: 288 tttttgagcttggagcggtcatgctccggcgaaagttttaccctgcagctatcaaatatc 347 ||||||||||||||| |||||||| ||| |||| ||||||||||| ||||||||||||| Sbjct: 804 attttgagcttggagcagtcatgctacggagaaaattttaccctgctgctatcaaatatc 863 Query: 348 tacagcaagcaatccaaaaatgggatagagatgagcaagatctcgcacag 397 ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 864 tacagcaagcaatccaaaaatgggatagagatgagcaagatcttgcacag 913
>dbj|AK065396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023F13, full insert sequence Length = 1984 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Plus Query: 48 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 107 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 599 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 658 Query: 108 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 167 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 659 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 718 Query: 168 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 227 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 719 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 778 Query: 228 atctttccgcgaaagacttgcaggaacaagtgagaagtggtgagggaagcgctactgaac 287 ||||||| || ||||| |||||||||||||||||||||||||| | ||| |||||||| Sbjct: 779 atctttctgccaaagagttgcaggaacaagtgagaagtggtgatgcaagtgctactgagt 838 Query: 288 tttttgagcttggagcggtcatgctccggcgaaagttttaccctgcagctatcaaatatc 347 ||||||||||||||| |||||||| ||| |||| ||||||||||| ||||||||||||| Sbjct: 839 attttgagcttggagcagtcatgctacggagaaaattttaccctgctgctatcaaatatc 898 Query: 348 tacagcaagcaatccaaaaatgggatagagatgagcaagatctcgcacag 397 ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 899 tacagcaagcaatccaaaaatgggatagagatgagcaagatcttgcacag 948
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 214 bits (108), Expect = 2e-52 Identities = 180/204 (88%) Strand = Plus / Minus Query: 48 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 107 ||||||| ||||||||||| |||||||| ||||||||||| ||| ||||| ||||||| Sbjct: 15759719 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatttaaacatggttt 15759660 Query: 108 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 167 | ||||| ||||| || |||||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 15759659 atgaggttggggaactattcgagcttggaattcagttgtcttatcttctcatactacttg 15759600 Query: 168 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 227 | ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 15759599 gtctgcttggagctggtacatttttcgtcatccgtcaggttcttgtccgcagagagcttg 15759540 Query: 228 atctttccgcgaaagacttgcagg 251 ||||||| || ||||| ||||||| Sbjct: 15759539 atctttctgccaaagatttgcagg 15759516 Score = 196 bits (99), Expect = 6e-47 Identities = 138/151 (91%) Strand = Plus / Minus Query: 249 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 308 |||||||||||||||||||||| | ||| |||||||| ||||||||| ||||| |||| Sbjct: 15759125 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagctgggagcagtca 15759066 Query: 309 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 368 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 15759065 tgctacggagaaaattttaccctgccgctatcaaatatctacagcaagcaatccaaaaat 15759006 Query: 369 gggatagagatgagcaagatctcgcacaggt 399 |||||||||||||||||||||| |||||||| Sbjct: 15759005 gggatagagatgagcaagatcttgcacaggt 15758975 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 395 caggtgtacaatgccctgggggttagctacaagcgagagaacaaactggacaaggcaatc 454 |||||||||||||||||||| || |||||||| || || |||||||| |||||||| ||| Sbjct: 15768022 caggtgtacaatgccctgggagtcagctacaaacgggataacaaactcgacaaggcgatc 15768081 Query: 455 aagcaattcgagaaggc 471 ||||||| |||||||| Sbjct: 15768082 cagcaatttgagaaggc 15768098
>dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0404D10 Length = 155069 Score = 214 bits (108), Expect = 2e-52 Identities = 180/204 (88%) Strand = Plus / Minus Query: 48 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 107 ||||||| ||||||||||| |||||||| ||||||||||| ||| ||||| ||||||| Sbjct: 74175 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatttaaacatggttt 74116 Query: 108 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 167 | ||||| ||||| || |||||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 74115 atgaggttggggaactattcgagcttggaattcagttgtcttatcttctcatactacttg 74056 Query: 168 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 227 | ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 74055 gtctgcttggagctggtacatttttcgtcatccgtcaggttcttgtccgcagagagcttg 73996 Query: 228 atctttccgcgaaagacttgcagg 251 ||||||| || ||||| ||||||| Sbjct: 73995 atctttctgccaaagatttgcagg 73972 Score = 196 bits (99), Expect = 6e-47 Identities = 138/151 (91%) Strand = Plus / Minus Query: 249 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 308 |||||||||||||||||||||| | ||| |||||||| ||||||||| ||||| |||| Sbjct: 73581 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagctgggagcagtca 73522 Query: 309 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 368 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 73521 tgctacggagaaaattttaccctgccgctatcaaatatctacagcaagcaatccaaaaat 73462 Query: 369 gggatagagatgagcaagatctcgcacaggt 399 |||||||||||||||||||||| |||||||| Sbjct: 73461 gggatagagatgagcaagatcttgcacaggt 73431 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 395 caggtgtacaatgccctgggggttagctacaagcgagagaacaaactggacaaggcaatc 454 |||||||||||||||||||| || |||||||| || || |||||||| |||||||| ||| Sbjct: 82478 caggtgtacaatgccctgggagtcagctacaaacgggataacaaactcgacaaggcgatc 82537 Query: 455 aagcaattcgagaaggc 471 ||||||| |||||||| Sbjct: 82538 cagcaatttgagaaggc 82554
>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete sequence Length = 149978 Score = 204 bits (103), Expect = 2e-49 Identities = 139/151 (92%) Strand = Plus / Minus Query: 249 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 308 |||||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||| Sbjct: 75771 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagcttggagcagtca 75712 Query: 309 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 368 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 75711 tgctacggagaaaattttaccctgctgctatcaaatatctacagcaagcaatccaaaaat 75652 Query: 369 gggatagagatgagcaagatctcgcacaggt 399 |||||||||||||||||||||| |||||||| Sbjct: 75651 gggatagagatgagcaagatcttgcacaggt 75621 Score = 196 bits (99), Expect = 6e-47 Identities = 138/151 (91%) Strand = Plus / Minus Query: 249 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 308 |||||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||| Sbjct: 55934 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagcttggagcagtca 55875 Query: 309 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 368 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 55874 tgctacggagaaaattttaccctgctgctatcaaatatctacagcaagcaatccaaaaat 55815 Query: 369 gggatagagatgagcaagatctcgcacaggt 399 ||||||| |||||||||||||| |||||||| Sbjct: 55814 gggatagggatgagcaagatcttgcacaggt 55784 Score = 182 bits (92), Expect = 8e-43 Identities = 176/204 (86%) Strand = Plus / Minus Query: 48 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 107 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 78301 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 78242 Query: 108 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 167 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 78241 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 78182 Query: 168 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 227 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 78181 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 78122 Query: 228 atctttccgcgaaagacttgcagg 251 ||||||| || ||||| ||||||| Sbjct: 78121 atctttctgccaaagagttgcagg 78098 Score = 182 bits (92), Expect = 8e-43 Identities = 176/204 (86%) Strand = Plus / Minus Query: 48 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 107 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 58470 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 58411 Query: 108 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 167 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 58410 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 58351 Query: 168 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 227 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 58350 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 58291 Query: 228 atctttccgcgaaagacttgcagg 251 ||||||| || ||||| ||||||| Sbjct: 58290 atctttctgccaaagagttgcagg 58267 Score = 129 bits (65), Expect = 1e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 395 caggtgtacaatgccctgggggttagctacaagcgagagaacaaactggacaaggcaatc 454 ||||| |||||||||||||| || |||||||||||||| |||||||| |||||| | ||| Sbjct: 55406 caggtatacaatgccctgggagtcagctacaagcgagataacaaacttgacaagtcgatc 55347 Query: 455 aagcaattcgagaaggctgtggagctccaaccgggctatgtgacggcatggaacaaccta 514 ||||||| ||||||||||| ||||| || || ||||||||||| || ||||||||||| Sbjct: 55346 cagcaatttgagaaggctgttgagcttcagccaggctatgtgacagcttggaacaacctc 55287 Query: 515 ggcgacgcgtatgagca 531 || ||||| |||||||| Sbjct: 55286 ggggacgcatatgagca 55270
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 204 bits (103), Expect = 2e-49 Identities = 139/151 (92%) Strand = Plus / Minus Query: 249 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 308 |||||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||| Sbjct: 16457672 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagcttggagcagtca 16457613 Query: 309 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 368 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 16457612 tgctacggagaaaattttaccctgctgctatcaaatatctacagcaagcaatccaaaaat 16457553 Query: 369 gggatagagatgagcaagatctcgcacaggt 399 |||||||||||||||||||||| |||||||| Sbjct: 16457552 gggatagagatgagcaagatcttgcacaggt 16457522 Score = 196 bits (99), Expect = 6e-47 Identities = 138/151 (91%) Strand = Plus / Minus Query: 249 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 308 |||||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||| Sbjct: 16437835 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagcttggagcagtca 16437776 Query: 309 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 368 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 16437775 tgctacggagaaaattttaccctgctgctatcaaatatctacagcaagcaatccaaaaat 16437716 Query: 369 gggatagagatgagcaagatctcgcacaggt 399 ||||||| |||||||||||||| |||||||| Sbjct: 16437715 gggatagggatgagcaagatcttgcacaggt 16437685 Score = 182 bits (92), Expect = 8e-43 Identities = 176/204 (86%) Strand = Plus / Minus Query: 48 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 107 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 16460202 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 16460143 Query: 108 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 167 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 16460142 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 16460083 Query: 168 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 227 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 16460082 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 16460023 Query: 228 atctttccgcgaaagacttgcagg 251 ||||||| || ||||| ||||||| Sbjct: 16460022 atctttctgccaaagagttgcagg 16459999 Score = 182 bits (92), Expect = 8e-43 Identities = 176/204 (86%) Strand = Plus / Minus Query: 48 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 107 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 16440371 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 16440312 Query: 108 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 167 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 16440311 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 16440252 Query: 168 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 227 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 16440251 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 16440192 Query: 228 atctttccgcgaaagacttgcagg 251 ||||||| || ||||| ||||||| Sbjct: 16440191 atctttctgccaaagagttgcagg 16440168 Score = 129 bits (65), Expect = 1e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 395 caggtgtacaatgccctgggggttagctacaagcgagagaacaaactggacaaggcaatc 454 ||||| |||||||||||||| || |||||||||||||| |||||||| |||||| | ||| Sbjct: 16437307 caggtatacaatgccctgggagtcagctacaagcgagataacaaacttgacaagtcgatc 16437248 Query: 455 aagcaattcgagaaggctgtggagctccaaccgggctatgtgacggcatggaacaaccta 514 ||||||| ||||||||||| ||||| || || ||||||||||| || ||||||||||| Sbjct: 16437247 cagcaatttgagaaggctgttgagcttcagccaggctatgtgacagcttggaacaacctc 16437188 Query: 515 ggcgacgcgtatgagca 531 || ||||| |||||||| Sbjct: 16437187 ggggacgcatatgagca 16437171
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 204 bits (103), Expect = 2e-49 Identities = 139/151 (92%) Strand = Plus / Minus Query: 249 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 308 |||||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||| Sbjct: 16465913 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagcttggagcagtca 16465854 Query: 309 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 368 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 16465853 tgctacggagaaaattttaccctgctgctatcaaatatctacagcaagcaatccaaaaat 16465794 Query: 369 gggatagagatgagcaagatctcgcacaggt 399 |||||||||||||||||||||| |||||||| Sbjct: 16465793 gggatagagatgagcaagatcttgcacaggt 16465763 Score = 196 bits (99), Expect = 6e-47 Identities = 138/151 (91%) Strand = Plus / Minus Query: 249 aggaacaagtgagaagtggtgagggaagcgctactgaactttttgagcttggagcggtca 308 |||||||||||||||||||||| | ||| |||||||| ||||||||||||||| |||| Sbjct: 16446076 aggaacaagtgagaagtggtgatgcaagtgctactgagtattttgagcttggagcagtca 16446017 Query: 309 tgctccggcgaaagttttaccctgcagctatcaaatatctacagcaagcaatccaaaaat 368 |||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 16446016 tgctacggagaaaattttaccctgctgctatcaaatatctacagcaagcaatccaaaaat 16445957 Query: 369 gggatagagatgagcaagatctcgcacaggt 399 ||||||| |||||||||||||| |||||||| Sbjct: 16445956 gggatagggatgagcaagatcttgcacaggt 16445926 Score = 182 bits (92), Expect = 8e-43 Identities = 176/204 (86%) Strand = Plus / Minus Query: 48 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 107 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 16468443 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 16468384 Query: 108 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 167 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 16468383 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 16468324 Query: 168 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 227 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 16468323 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 16468264 Query: 228 atctttccgcgaaagacttgcagg 251 ||||||| || ||||| ||||||| Sbjct: 16468263 atctttctgccaaagagttgcagg 16468240 Score = 182 bits (92), Expect = 8e-43 Identities = 176/204 (86%) Strand = Plus / Minus Query: 48 catggttgagttttgcacagtcagcacagtctagtgaaggagtaaagttaaatatggttt 107 ||||||| ||||||||||| |||||||| ||||||||||| ||| |||| ||||||| Sbjct: 16448612 catggttaagttttgcacaaacagcacaggctagtgaaggaacaaatataaacatggttt 16448553 Query: 108 acgaggtcggggagctgttcgagctgggaattcagctttcgtatctcctcatactacttg 167 | ||||| |||||||| || ||||| ||||||||| | || ||||| ||||||||||||| Sbjct: 16448552 atgaggttggggagctatttgagcttggaattcagttgtcttatcttctcatactacttg 16448493 Query: 168 gcctgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttg 227 | || |||||| |||||||||||||||| || ||||| ||||||||||| |||||||||| Sbjct: 16448492 gtcttcttggagctggtacattttttgtcattcgtcaagttcttgtccgtagagagcttg 16448433 Query: 228 atctttccgcgaaagacttgcagg 251 ||||||| || ||||| ||||||| Sbjct: 16448432 atctttctgccaaagagttgcagg 16448409 Score = 129 bits (65), Expect = 1e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 395 caggtgtacaatgccctgggggttagctacaagcgagagaacaaactggacaaggcaatc 454 ||||| |||||||||||||| || |||||||||||||| |||||||| |||||| | ||| Sbjct: 16445548 caggtatacaatgccctgggagtcagctacaagcgagataacaaacttgacaagtcgatc 16445489 Query: 455 aagcaattcgagaaggctgtggagctccaaccgggctatgtgacggcatggaacaaccta 514 ||||||| ||||||||||| ||||| || || ||||||||||| || ||||||||||| Sbjct: 16445488 cagcaatttgagaaggctgttgagcttcagccaggctatgtgacagcttggaacaacctc 16445429 Query: 515 ggcgacgcgtatgagca 531 || ||||| |||||||| Sbjct: 16445428 ggggacgcatatgagca 16445412
>gb|AC171733.1| Lycopersicon esculentum chromosome 11 clone C11HBa0034I10, complete sequence Length = 95704 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 191 tttgtgatccgtcaggttcttgtccgcagagagcttgatctttccgcgaaagacttgca 249 |||||||| || || || |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 43833 tttgtgattcggcaagtccttgtccgcagagagcttgatctttctgccaaagaattgca 43891 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 482 caaccgggctatgtgacggcatggaacaacctaggcgacgcgtatgag 529 ||||| || ||||| ||||||||||||||||| ||||| || |||||| Sbjct: 45479 caacctggttatgtcacggcatggaacaaccttggcgatgcatatgag 45526
>ref|NM_102117.3| Arabidopsis thaliana unknown protein AT1G22700 transcript variant AT1G22700.2 mRNA, complete cds Length = 1111 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 171 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 230 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 469 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 528 Query: 231 tttccgcgaaagacttgcaggaacaagt 258 | ||||| ||||| |||||||| ||||| Sbjct: 529 tctccgctaaagaattgcaggagcaagt 556
>ref|NM_180619.1| Arabidopsis thaliana unknown protein AT1G22700 transcript variant AT1G22700.1 mRNA, complete cds Length = 1131 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 171 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 230 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 463 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 522 Query: 231 tttccgcgaaagacttgcaggaacaagt 258 | ||||| ||||| |||||||| ||||| Sbjct: 523 tctccgctaaagaattgcaggagcaagt 550
>gb|AF410279.1|AF410279 Arabidopsis thaliana At1g22700/T22J18_13 mRNA, complete cds Length = 1110 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 171 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 230 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 470 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 529 Query: 231 tttccgcgaaagacttgcaggaacaagt 258 | ||||| ||||| |||||||| ||||| Sbjct: 530 tctccgctaaagaattgcaggagcaagt 557
>emb|BX813665.1|CNS0ADUP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB31ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1070 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 171 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 230 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 455 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 514 Query: 231 tttccgcgaaagacttgcaggaacaagt 258 | ||||| ||||| |||||||| ||||| Sbjct: 515 tctccgctaaagaattgcaggagcaagt 542
>gb|AY084882.1| Arabidopsis thaliana clone 120133 mRNA, complete sequence Length = 1128 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 171 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 230 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 463 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 522 Query: 231 tttccgcgaaagacttgcaggaacaagt 258 | ||||| ||||| |||||||| ||||| Sbjct: 523 tctccgctaaagaattgcaggagcaagt 550
>gb|BT001148.1| Arabidopsis thaliana At1g22700/T22J18_13 mRNA, complete cds Length = 891 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 171 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 230 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 380 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 439 Query: 231 tttccgcgaaagacttgcaggaacaagt 258 | ||||| ||||| |||||||| ||||| Sbjct: 440 tctccgctaaagaattgcaggagcaagt 467
>emb|BX814448.1|CNS0ADTY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1039 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 171 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 230 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 418 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactcgacc 477 Query: 231 tttccgcgaaagacttgcaggaacaagtgag 261 | ||||| ||||| |||||||| | |||||| Sbjct: 478 tctccgctaaagagttgcaggagcgagtgag 508
>emb|BX813492.1|CNS0ADUF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB20ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1258 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 171 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 230 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 455 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 514 Query: 231 tttccgcgaaagacttgcagg 251 | ||||| ||||| ||||||| Sbjct: 515 tctccgctaaagaattgcagg 535
>gb|AC003979.2|T22J18 Arabidopsis thaliana chromosome 1 BAC T22J18 sequence, complete sequence Length = 84162 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 171 tgcttggaactggtacattttttgtgatccgtcaggttcttgtccgcagagagcttgatc 230 |||||||| |||||| || | |||||||||||| || ||||| |||||||| || || | Sbjct: 50127 tgcttggagttggtactttctatgtgatccgtcaagtacttgtacgcagagaactagacc 50186 Query: 231 tttccgcgaaagacttgcagg 251 | ||||| ||||| ||||||| Sbjct: 50187 tctccgctaaagaattgcagg 50207
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 366 aatgggatagagatgagcaagat 388 ||||||||||||||||||||||| Sbjct: 16841104 aatgggatagagatgagcaagat 16841082
>dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0025G03 Length = 139560 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 366 aatgggatagagatgagcaagat 388 ||||||||||||||||||||||| Sbjct: 71262 aatgggatagagatgagcaagat 71240
>emb|AL672045.11| Human DNA sequence from clone RP11-577O19 on chromosome 1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1) pseudogene, complete sequence Length = 180303 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 255 aagtgagaagtggtgagggaag 276 |||||||||||||||||||||| Sbjct: 39139 aagtgagaagtggtgagggaag 39160
>emb|CR721782.2|CNS0GJVG Tetraodon nigroviridis full-length cDNA Length = 1098 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttgagttttgcacagtcagca 73 ||||||||||||||||||||| Sbjct: 522 ttgagttttgcacagtcagca 502
>gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, complete sequence Length = 255663 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 caaaaatgggatagagatga 381 |||||||||||||||||||| Sbjct: 236228 caaaaatgggatagagatga 236209
>gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, complete sequence Length = 225738 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 caaaaatgggatagagatga 381 |||||||||||||||||||| Sbjct: 105097 caaaaatgggatagagatga 105078
>gb|AC093563.3| Homo sapiens chromosome 1 clone RP4-648I13, complete sequence Length = 163579 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 acagcaagcaatccaaaaat 368 |||||||||||||||||||| Sbjct: 11408 acagcaagcaatccaaaaat 11389
>emb|AL121574.19|HSJ441A12 Human DNA sequence from clone RP3-441A12 on chromosome 6 Contains a novel gene, the 5' end of the TEX27 gene for testis expressed sequence 27 (FLJ13222) and a CpG island, complete sequence Length = 120335 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 actacttggcctgcttggaa 179 |||||||||||||||||||| Sbjct: 90408 actacttggcctgcttggaa 90427
>dbj|AK148567.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120408L21 product:hypothetical protein, full insert sequence Length = 3397 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 caaaaatgggatagagatga 381 |||||||||||||||||||| Sbjct: 374 caaaaatgggatagagatga 393
>gb|AC019187.3|AC019187 Homo sapiens BAC clone RP11-304J20 from 1, complete sequence Length = 174673 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 acagcaagcaatccaaaaat 368 |||||||||||||||||||| Sbjct: 133514 acagcaagcaatccaaaaat 133533
>emb|AL732370.10| Mouse DNA sequence from clone RP23-413I21 on chromosome X, complete sequence Length = 199391 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 ggaattcagctttcgtatctcctc 157 |||||||||||||| ||||||||| Sbjct: 79687 ggaattcagctttcctatctcctc 79710
>gb|AC119679.2| Homo sapiens chromosome 1 clone RP4-651N22, complete sequence Length = 119163 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 acagcaagcaatccaaaaat 368 |||||||||||||||||||| Sbjct: 97154 acagcaagcaatccaaaaat 97135
>dbj|AB017067.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJC20 Length = 83689 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tacttccttttggtgttacg 46 |||||||||||||||||||| Sbjct: 24373 tacttccttttggtgttacg 24392
>gb|AY260760.3| Streptomyces hygroscopicus subsp. yingchengensis Shy1 (shy1), CvhE (cvhE), CvhD (cvhD), CvhC (cvhC), CvhB (cvhB), CvhA (cvhA), Shy26 (shy26), Shy4 (shy4), Shy5 (shy5), Shy6 (shy6), Shy7 (shy7), Shy8 (shy8), Shy9 (shy9), Shy10 (shy10), Shy11 (shy11), Shy12 (shy12), Shy13 (shy13), Shy14 (shy14), Shy15 (shy15), Shy16 (shy16), Shy17 (shy17), Shy18 (shy18), Hmr19 (hmr19), Shy20 (shy20), Shy21 (shy21), Shy22 (shy22), Shy23 (shy23), Shy24 (shy24), and Shy25 (shy25) genes, complete cds Length = 36687 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 acgaggtcggggagctgttcgagc 131 |||||||||||||| ||||||||| Sbjct: 2365 acgaggtcggggaggtgttcgagc 2388
>emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 218329 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 431 gagaacaaactggacaaggcaatc 454 ||||||||||||||| |||||||| Sbjct: 35805 gagaacaaactggacgaggcaatc 35828
>gb|AC145963.5| Gallus gallus BAC clone CH261-20A24 from chromosome unknown, complete sequence Length = 185318 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cagtctagtgaaggagtaaa 93 |||||||||||||||||||| Sbjct: 170845 cagtctagtgaaggagtaaa 170826
>emb|AL049743.10|HSDJ653C5 Human DNA sequence from clone RP4-653C5 on chromosome 1p21.3-22.3, complete sequence Length = 85237 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 acagcaagcaatccaaaaat 368 |||||||||||||||||||| Sbjct: 47739 acagcaagcaatccaaaaat 47720
>gb|AC156836.6| Mus musculus BAC clone RP23-88L11 from chromosome 10, complete sequence Length = 255961 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 caaatatctacagcaagcaa 359 |||||||||||||||||||| Sbjct: 219469 caaatatctacagcaagcaa 219450 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,450,774 Number of Sequences: 3902068 Number of extensions: 4450774 Number of successful extensions: 73631 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73451 Number of HSP's gapped (non-prelim): 180 length of query: 570 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 547 effective length of database: 17,143,297,704 effective search space: 9377383844088 effective search space used: 9377383844088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)