ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags23o03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450174.1| Oryza sativa (japonica cultivar-group), mRNA 127 4e-26
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
3dbj|AP005582.3| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
4dbj|AK103761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
5gb|AE010411.1| Methanopyrus kandleri AV19 section 110 of 157 of ... 50 0.008
6gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome 48 0.032
7gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, ... 48 0.032
8ref|XM_493831.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.51
9ref|XM_956290.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.51
10ref|XM_326789.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.51
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.51
12gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genom... 44 0.51
13emb|BX294016.1|NCB9K17 Neurospora crassa DNA linkage group V BAC... 44 0.51
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
15dbj|AK067596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.51
16gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 42 2.0
17ref|XM_474233.1| Oryza sativa (japonica cultivar-group), predic... 42 2.0
18gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
19emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4,... 42 2.0
20gb|DQ099045.1| Arachis stenosperma clone AS1RI2D06 microsatellit... 42 2.0
21gb|AC073910.20| Homo sapiens Xp BAC RP11-654E17 (Roswell Park Ca... 42 2.0
22dbj|AK048059.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 42 2.0
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
24dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
25dbj|AK105459.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
26dbj|AK073699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
27dbj|AK071883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
28emb|AL808128.4| Mouse DNA sequence from clone RP23-387C21 on chr... 42 2.0
29emb|AL591854.18| Mouse DNA sequence from clone RP23-105M23 on ch... 42 2.0
30dbj|AB040750.1| Mus musculus gene for prostacyclin synthase, 5'-... 42 2.0
31ref|XM_512452.1| PREDICTED: Pan troglodytes similar to bromodoma... 40 7.9
32ref|XM_470544.1| Oryza sativa (japonica cultivar-group), predic... 40 7.9
33ref|NM_058243.1| Homo sapiens bromodomain containing 4 (BRD4), t... 40 7.9
34ref|XM_473473.1| Oryza sativa (japonica cultivar-group), predic... 40 7.9
35gb|AC140311.2| Mus musculus BAC clone RP23-392M3 from chromosome... 40 7.9
36ref|XM_283804.6| PREDICTED: Mus musculus RIKEN cDNA 9830001H06 g... 40 7.9
37gb|AC140193.3| Mus musculus BAC clone RP23-247C12 from chromosom... 40 7.9
38ref|XM_532624.2| PREDICTED: Canis familiaris similar to chromodo... 40 7.9
39ref|XM_803854.1| Trypanosoma cruzi strain CL Brener tyrosyl or m... 40 7.9
40gb|AC122416.4| Mus musculus BAC clone RP24-157E17 from chromosom... 40 7.9
41gb|AC117225.3| Mus musculus BAC clone RP23-366F3 from 19, comple... 40 7.9
42emb|X97568.1|RNGRK4PCK Rattus norvegicus mRNA for G protein-coup... 40 7.9
43emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome;... 40 7.9
44emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 40 7.9
45emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4,... 40 7.9
46emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4,... 40 7.9
47emb|CR626905.5| Zebrafish DNA sequence from clone DKEY-85H21 in ... 40 7.9
48gb|AC153857.7| Mus musculus 6 BAC RP23-158G17 (Roswell Park Canc... 40 7.9
49dbj|AK147227.1| Mus musculus 15 days embryo whole body cDNA, RIK... 40 7.9
50gb|AF386649.1|AF386649 Homo sapiens bromodomain-containing 4 (BR... 40 7.9
51gb|AC078961.23| Homo sapiens 4 BAC RP11-486H4 (Roswell Park Canc... 40 7.9
52gb|AC004798.1|AC004798 Homo sapiens chromosome 19, cosmid R31546... 40 7.9
53dbj|AK034818.1| Mus musculus 12 days embryo embryonic body betwe... 40 7.9
54dbj|AK031493.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 7.9
55dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
56dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
57dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
58ref|NM_022928.1| Rattus norvegicus G protein-coupled receptor ki... 40 7.9
59gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
60dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
61dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, comp... 40 7.9
62dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
63dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
64dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
65dbj|AK173052.1| Mus musculus mRNA for mKIAA0889 protein 40 7.9
66dbj|AK106042.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
67dbj|AK073589.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
68dbj|AK066647.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
69dbj|AK059479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
70dbj|AP003850.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
71gb|BC092639.1| Rattus norvegicus p300/CBP-associated factor, mRN... 40 7.9
72gb|DQ196107.1| Chlamydomonas reinhardtii pherophorin-C1 protein ... 40 7.9
73ref|NM_001024252.1| Rattus norvegicus p300/CBP-associated factor... 40 7.9
74gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
75emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.9
76gb|AC124711.3| Mus musculus BAC clone RP24-100M12 from 12, compl... 40 7.9
77gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
78emb|AL732474.8| Mouse DNA sequence from clone RP23-180I2 on chro... 40 7.9
79dbj|AB020810.1| Agkistrodon blomhoffi mRNA for BPP-CNP precursor... 40 7.9
80emb|AL669932.14| Mouse DNA sequence from clone RP23-430P1 on chr... 40 7.9 
>ref|XM_450174.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2493

 Score =  127 bits (64), Expect = 4e-26
 Identities = 172/208 (82%)
 Strand = Plus / Plus

                                                                        
Query: 307  gaaggttgtgacgagatggaggcctctcaagctggtgtatggccatgacattaggcttgg 366
            ||||||||| || ||||  ||||| |||||||||||||| |  ||||| || ||||||| 
Sbjct: 895  gaaggttgtcacaagatcaaggccgctcaagctggtgtacgatcatgatataaggcttgc 954

                                                                        
Query: 367  gcagatgcctgaaaaatgcagcttccatgagctcagggaagttgtggcgaagcgcttccc 426
            ||||||||| ||||||||||||||||     ||| | |||||||||||    || |||||
Sbjct: 955  gcagatgccagaaaaatgcagcttccgaacactccgtgaagttgtggcatcacgattccc 1014

                                                                        
Query: 427  atcatccaaggcggtgttgatgaagtataaggatgccgatggtgatctagttaccatcac 486
            ||| |||||||| ||| |||| |||||||||||||| ||||||||||| |||||||| ||
Sbjct: 1015 atcgtccaaggctgtgctgattaagtataaggatgctgatggtgatctggttaccattac 1074

                                        
Query: 487  ttgcacatcagaactccgattggccgag 514
            |||  |  ||||||| ||||||||||||
Sbjct: 1075 ttgttccgcagaacttcgattggccgag 1102



 Score =  109 bits (55), Expect = 1e-20
 Identities = 189/233 (81%), Gaps = 3/233 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   gaacccaccagccgcccttcccccgccgcccttggtgcctcggccgttgtggccggcctt 61
           ||||| || |||||||| ||||| || || ||||||||||| || ||||| |||||||| 
Sbjct: 587 gaaccaactagccgcccctcccctgctgctcttggtgcctccgctgttgttgccggccta 646

                                                                       
Query: 62  ggcccatccctcccttcccgccccttcccaaagaaacaatcgcctccgtcgcctcctcct 121
           ||||| ||||||||  | ||||| ||||| ||||||| ||| |||||  | || ||| ||
Sbjct: 647 ggcccgtccctccccgctcgccctttccccaagaaaccatcacctcctcctccgcctgct 706

                                                                       
Query: 122 ccgcagcagcaaccagctcctgcgatgactaaatttaattcctcgccagc---gcccaag 178
           |  || |||||| | | |||| | ||| | ||||||||| | |||||| |   |||||||
Sbjct: 707 caacaacagcaatcggttcctccaatgtcaaaatttaatccgtcgccaccatcgcccaag 766

                                                                
Query: 179 ttggtgcccttctccaactctccgtcatcttctgccaaggcttcaactgctga 231
           |||||||| ||||||||||||||| ||||||||||||| || ||| |||||||
Sbjct: 767 ttggtgcctttctccaactctccgccatcttctgccaacgcatcagctgctga 819
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  127 bits (64), Expect = 4e-26
 Identities = 172/208 (82%)
 Strand = Plus / Plus

                                                                           
Query: 307     gaaggttgtgacgagatggaggcctctcaagctggtgtatggccatgacattaggcttgg 366
               ||||||||| || ||||  ||||| |||||||||||||| |  ||||| || ||||||| 
Sbjct: 2633400 gaaggttgtcacaagatcaaggccgctcaagctggtgtacgatcatgatataaggcttgc 2633459

                                                                           
Query: 367     gcagatgcctgaaaaatgcagcttccatgagctcagggaagttgtggcgaagcgcttccc 426
               ||||||||| ||||||||||||||||     ||| | |||||||||||    || |||||
Sbjct: 2633460 gcagatgccagaaaaatgcagcttccgaacactccgtgaagttgtggcatcacgattccc 2633519

                                                                           
Query: 427     atcatccaaggcggtgttgatgaagtataaggatgccgatggtgatctagttaccatcac 486
               ||| |||||||| ||| |||| |||||||||||||| ||||||||||| |||||||| ||
Sbjct: 2633520 atcgtccaaggctgtgctgattaagtataaggatgctgatggtgatctggttaccattac 2633579

                                           
Query: 487     ttgcacatcagaactccgattggccgag 514
               |||  |  ||||||| ||||||||||||
Sbjct: 2633580 ttgttccgcagaacttcgattggccgag 2633607



 Score =  109 bits (55), Expect = 1e-20
 Identities = 189/233 (81%), Gaps = 3/233 (1%)
 Strand = Plus / Plus

                                                                           
Query: 2       gaacccaccagccgcccttcccccgccgcccttggtgcctcggccgttgtggccggcctt 61
               ||||| || |||||||| ||||| || || ||||||||||| || ||||| |||||||| 
Sbjct: 2633092 gaaccaactagccgcccctcccctgctgctcttggtgcctccgctgttgttgccggccta 2633151

                                                                           
Query: 62      ggcccatccctcccttcccgccccttcccaaagaaacaatcgcctccgtcgcctcctcct 121
               ||||| ||||||||  | ||||| ||||| ||||||| ||| |||||  | || ||| ||
Sbjct: 2633152 ggcccgtccctccccgctcgccctttccccaagaaaccatcacctcctcctccgcctgct 2633211

                                                                           
Query: 122     ccgcagcagcaaccagctcctgcgatgactaaatttaattcctcgccagc---gcccaag 178
               |  || |||||| | | |||| | ||| | ||||||||| | |||||| |   |||||||
Sbjct: 2633212 caacaacagcaatcggttcctccaatgtcaaaatttaatccgtcgccaccatcgcccaag 2633271

                                                                    
Query: 179     ttggtgcccttctccaactctccgtcatcttctgccaaggcttcaactgctga 231
               |||||||| ||||||||||||||| ||||||||||||| || ||| |||||||
Sbjct: 2633272 ttggtgcctttctccaactctccgccatcttctgccaacgcatcagctgctga 2633324



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 101      tcgcctccgtcgcctcctcc 120
                ||||||||||||||||||||
Sbjct: 16904421 tcgcctccgtcgcctcctcc 16904440
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>dbj|AP005582.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0006E02
          Length = 141782

 Score =  127 bits (64), Expect = 4e-26
 Identities = 172/208 (82%)
 Strand = Plus / Plus

                                                                         
Query: 307   gaaggttgtgacgagatggaggcctctcaagctggtgtatggccatgacattaggcttgg 366
             ||||||||| || ||||  ||||| |||||||||||||| |  ||||| || ||||||| 
Sbjct: 78678 gaaggttgtcacaagatcaaggccgctcaagctggtgtacgatcatgatataaggcttgc 78737

                                                                         
Query: 367   gcagatgcctgaaaaatgcagcttccatgagctcagggaagttgtggcgaagcgcttccc 426
             ||||||||| ||||||||||||||||     ||| | |||||||||||    || |||||
Sbjct: 78738 gcagatgccagaaaaatgcagcttccgaacactccgtgaagttgtggcatcacgattccc 78797

                                                                         
Query: 427   atcatccaaggcggtgttgatgaagtataaggatgccgatggtgatctagttaccatcac 486
             ||| |||||||| ||| |||| |||||||||||||| ||||||||||| |||||||| ||
Sbjct: 78798 atcgtccaaggctgtgctgattaagtataaggatgctgatggtgatctggttaccattac 78857

                                         
Query: 487   ttgcacatcagaactccgattggccgag 514
             |||  |  ||||||| ||||||||||||
Sbjct: 78858 ttgttccgcagaacttcgattggccgag 78885



 Score =  109 bits (55), Expect = 1e-20
 Identities = 189/233 (81%), Gaps = 3/233 (1%)
 Strand = Plus / Plus

                                                                         
Query: 2     gaacccaccagccgcccttcccccgccgcccttggtgcctcggccgttgtggccggcctt 61
             ||||| || |||||||| ||||| || || ||||||||||| || ||||| |||||||| 
Sbjct: 78370 gaaccaactagccgcccctcccctgctgctcttggtgcctccgctgttgttgccggccta 78429

                                                                         
Query: 62    ggcccatccctcccttcccgccccttcccaaagaaacaatcgcctccgtcgcctcctcct 121
             ||||| ||||||||  | ||||| ||||| ||||||| ||| |||||  | || ||| ||
Sbjct: 78430 ggcccgtccctccccgctcgccctttccccaagaaaccatcacctcctcctccgcctgct 78489

                                                                         
Query: 122   ccgcagcagcaaccagctcctgcgatgactaaatttaattcctcgccagc---gcccaag 178
             |  || |||||| | | |||| | ||| | ||||||||| | |||||| |   |||||||
Sbjct: 78490 caacaacagcaatcggttcctccaatgtcaaaatttaatccgtcgccaccatcgcccaag 78549

                                                                  
Query: 179   ttggtgcccttctccaactctccgtcatcttctgccaaggcttcaactgctga 231
             |||||||| ||||||||||||||| ||||||||||||| || ||| |||||||
Sbjct: 78550 ttggtgcctttctccaactctccgccatcttctgccaacgcatcagctgctga 78602
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>dbj|AK103761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143G11, full
            insert sequence
          Length = 2493

 Score =  127 bits (64), Expect = 4e-26
 Identities = 172/208 (82%)
 Strand = Plus / Plus

                                                                        
Query: 307  gaaggttgtgacgagatggaggcctctcaagctggtgtatggccatgacattaggcttgg 366
            ||||||||| || ||||  ||||| |||||||||||||| |  ||||| || ||||||| 
Sbjct: 895  gaaggttgtcacaagatcaaggccgctcaagctggtgtacgatcatgatataaggcttgc 954

                                                                        
Query: 367  gcagatgcctgaaaaatgcagcttccatgagctcagggaagttgtggcgaagcgcttccc 426
            ||||||||| ||||||||||||||||     ||| | |||||||||||    || |||||
Sbjct: 955  gcagatgccagaaaaatgcagcttccgaacactccgtgaagttgtggcatcacgattccc 1014

                                                                        
Query: 427  atcatccaaggcggtgttgatgaagtataaggatgccgatggtgatctagttaccatcac 486
            ||| |||||||| ||| |||| |||||||||||||| ||||||||||| |||||||| ||
Sbjct: 1015 atcgtccaaggctgtgctgattaagtataaggatgctgatggtgatctggttaccattac 1074

                                        
Query: 487  ttgcacatcagaactccgattggccgag 514
            |||  |  ||||||| ||||||||||||
Sbjct: 1075 ttgttccgcagaacttcgattggccgag 1102



 Score =  109 bits (55), Expect = 1e-20
 Identities = 189/233 (81%), Gaps = 3/233 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   gaacccaccagccgcccttcccccgccgcccttggtgcctcggccgttgtggccggcctt 61
           ||||| || |||||||| ||||| || || ||||||||||| || ||||| |||||||| 
Sbjct: 587 gaaccaactagccgcccctcccctgctgctcttggtgcctccgctgttgttgccggccta 646

                                                                       
Query: 62  ggcccatccctcccttcccgccccttcccaaagaaacaatcgcctccgtcgcctcctcct 121
           ||||| ||||||||  | ||||| ||||| ||||||| ||| |||||  | || ||| ||
Sbjct: 647 ggcccgtccctccccgctcgccctttccccaagaaaccatcacctcctcctccgcctgct 706

                                                                       
Query: 122 ccgcagcagcaaccagctcctgcgatgactaaatttaattcctcgccagc---gcccaag 178
           |  || |||||| | | |||| | ||| | ||||||||| | |||||| |   |||||||
Sbjct: 707 caacaacagcaatcggttcctccaatgtcaaaatttaatccgtcgccaccatcgcccaag 766

                                                                
Query: 179 ttggtgcccttctccaactctccgtcatcttctgccaaggcttcaactgctga 231
           |||||||| ||||||||||||||| ||||||||||||| || ||| |||||||
Sbjct: 767 ttggtgcctttctccaactctccgccatcttctgccaacgcatcagctgctga 819
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>gb|AE010411.1| Methanopyrus kandleri AV19 section 110 of 157 of the complete genome
          Length = 12333

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 100  atcgcctccgtcgcctcctcctccg 124
            |||||||||||||||||||||||||
Sbjct: 3433 atcgcctccgtcgcctcctcctccg 3457
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>gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome
          Length = 221454

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 107    ccgtcgcctcctcctccgcagcagcaac 134
              ||||||||||| ||||||||||||||||
Sbjct: 203207 ccgtcgcctccgcctccgcagcagcaac 203180
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>gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, complete genome
          Length = 215678

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 107    ccgtcgcctcctcctccgcagcagcaac 134
              ||||||||||| ||||||||||||||||
Sbjct: 197409 ccgtcgcctccgcctccgcagcagcaac 197382
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>ref|XM_493831.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2388

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 102 cgcctccgtcgcctcctcctcc 123
           ||||||||||||||||||||||
Sbjct: 42  cgcctccgtcgcctcctcctcc 63
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>ref|XM_956290.1| Neurospora crassa OR74A hypothetical protein (NCU01297.1) partial
           mRNA
          Length = 1458

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 102 cgcctccgtcgcctcctcctcc 123
           ||||||||||||||||||||||
Sbjct: 879 cgcctccgtcgcctcctcctcc 900
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>ref|XM_326789.1| Neurospora crassa OR74A hypothetical protein (NCU01297.1) partial
           mRNA
          Length = 1458

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 102 cgcctccgtcgcctcctcctcc 123
           ||||||||||||||||||||||
Sbjct: 879 cgcctccgtcgcctcctcctcc 900
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 102     cgcctccgtcgcctcctcctcc 123
               ||||||||||||||||||||||
Sbjct: 9623544 cgcctccgtcgcctcctcctcc 9623523



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 104     cctccgtcgcctcctcctccgcagcagc 131
               |||||| |||||||||||||||| ||||
Sbjct: 4218711 cctccggcgcctcctcctccgcatcagc 4218684
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>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete
             sequence
          Length = 165113

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 102   cgcctccgtcgcctcctcctcc 123
             ||||||||||||||||||||||
Sbjct: 44443 cgcctccgtcgcctcctcctcc 44422
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>emb|BX294016.1|NCB9K17 Neurospora crassa DNA linkage group V BAC clone B9K17
          Length = 71774

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 102   cgcctccgtcgcctcctcctcc 123
             ||||||||||||||||||||||
Sbjct: 53720 cgcctccgtcgcctcctcctcc 53699
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 102     cgcctccgtcgcctcctcctcc 123
               ||||||||||||||||||||||
Sbjct: 9621665 cgcctccgtcgcctcctcctcc 9621644



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 104     cctccgtcgcctcctcctccgcagcagc 131
               |||||| |||||||||||||||| ||||
Sbjct: 4218820 cctccggcgcctcctcctccgcatcagc 4218793
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>dbj|AK067596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G02, full
           insert sequence
          Length = 2449

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 102 cgcctccgtcgcctcctcctcc 123
           ||||||||||||||||||||||
Sbjct: 130 cgcctccgtcgcctcctcctcc 151
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 102     cgcctccgtcgcctcctcctc 122
               |||||||||||||||||||||
Sbjct: 1623778 cgcctccgtcgcctcctcctc 1623798
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>ref|XM_474233.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 564

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 106 tccgtcgcctcctcctccgcagcag 130
           |||||||||||||||||||| ||||
Sbjct: 47  tccgtcgcctcctcctccgccgcag 23
to top
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02,
             complete sequence
          Length = 138584

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   cctcctcctccgcagcagcaa 133
             |||||||||||||||||||||
Sbjct: 86622 cctcctcctccgcagcagcaa 86642
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>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01,
              complete sequence
          Length = 163448

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 106    tccgtcgcctcctcctccgcagcag 130
              |||||||||||||||||||| ||||
Sbjct: 102475 tccgtcgcctcctcctccgccgcag 102451
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>gb|DQ099045.1| Arachis stenosperma clone AS1RI2D06 microsatellite sequence
          Length = 592

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 104 cctccgtcgcctcctcctccg 124
           |||||||||||||||||||||
Sbjct: 159 cctccgtcgcctcctcctccg 179
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>gb|AC073910.20| Homo sapiens Xp BAC RP11-654E17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 145400

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 526   tggcatggatgtaaaggaagg 546
             |||||||||||||||||||||
Sbjct: 12817 tggcatggatgtaaaggaagg 12797
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>dbj|AK048059.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
          library, clone:C130032H06 product:prostaglandin I2
          (prostacyclin) synthase, full insert sequence
          Length = 1712

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 65 ccatccctcccttcccgccccttcc 89
          |||||||||||||||||| ||||||
Sbjct: 18 ccatccctcccttcccgctccttcc 42
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 106      tccgtcgcctcctcctccgcagcag 130
                |||||||||||||||||||| ||||
Sbjct: 33890576 tccgtcgcctcctcctccgccgcag 33890552



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 102      cgcctccgtcgcctcctcctccgc 125
                ||||||| ||||||||||||||||
Sbjct: 27954996 cgcctccttcgcctcctcctccgc 27955019



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 102     cgcctccgtcgcctcctcctccgc 125
               |||| |||||||||||||||||||
Sbjct: 9735944 cgccgccgtcgcctcctcctccgc 9735921
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 113      cctcctcctccgcagcagcaa 133
                |||||||||||||||||||||
Sbjct: 23882787 cctcctcctccgcagcagcaa 23882807
to top
>dbj|AK105459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-E07, full
           insert sequence
          Length = 1233

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 cctcctcctccgcagcagcaa 133
           |||||||||||||||||||||
Sbjct: 201 cctcctcctccgcagcagcaa 221
to top
>dbj|AK073699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059L16, full
           insert sequence
          Length = 1218

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 cctcctcctccgcagcagcaa 133
           |||||||||||||||||||||
Sbjct: 205 cctcctcctccgcagcagcaa 225
to top
>dbj|AK071883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046O12, full
           insert sequence
          Length = 1359

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 cctcctcctccgcagcagcaa 133
           |||||||||||||||||||||
Sbjct: 207 cctcctcctccgcagcagcaa 227
to top
>emb|AL808128.4| Mouse DNA sequence from clone RP23-387C21 on chromosome 2, complete
             sequence
          Length = 184736

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 381   aatgcagcttccatgagctca 401
             |||||||||||||||||||||
Sbjct: 30944 aatgcagcttccatgagctca 30964
to top
>emb|AL591854.18| Mouse DNA sequence from clone RP23-105M23 on chromosome 2, complete
              sequence
          Length = 187181

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 65     ccatccctcccttcccgccccttcc 89
              |||||||||||||||||| ||||||
Sbjct: 117578 ccatccctcccttcccgctccttcc 117554
to top
>dbj|AB040750.1| Mus musculus gene for prostacyclin synthase, 5'-flanking region and
            partial cds
          Length = 1680

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 65   ccatccctcccttcccgccccttcc 89
            |||||||||||||||||| ||||||
Sbjct: 1397 ccatccctcccttcccgctccttcc 1421
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>ref|XM_512452.1| PREDICTED: Pan troglodytes similar to bromodomain-containing protein
            4 isoform long; chromosome-associated protein;
            bromodomain-containing 4 (LOC455794), mRNA
          Length = 4287

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 111  cgcctcctcctccgcagcagcaac 134
            ||||||| ||||||||||||||||
Sbjct: 3161 cgcctccacctccgcagcagcaac 3184
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>ref|XM_470544.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 630

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 104 cctccgtcgcctcctcctccgcagcagc 131
           |||||| |||||||||||||||| ||||
Sbjct: 211 cctccggcgcctcctcctccgcatcagc 184
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>ref|NM_058243.1| Homo sapiens bromodomain containing 4 (BRD4), transcript variant
            long, mRNA
          Length = 5198

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 111  cgcctcctcctccgcagcagcaac 134
            ||||||| ||||||||||||||||
Sbjct: 2519 cgcctccacctccgcagcagcaac 2542
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>ref|XM_473473.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1137

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 102 cgcctccgtcgcctcctcctccgc 125
           ||||||| ||||||||||||||||
Sbjct: 333 cgcctccttcgcctcctcctccgc 310
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>gb|AC140311.2| Mus musculus BAC clone RP23-392M3 from chromosome 9, complete sequence
          Length = 195460

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 464    gatggtgatctagttaccatcacttgca 491
              ||||||||||||||| ||| ||||||||
Sbjct: 145722 gatggtgatctagttcccagcacttgca 145749
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>ref|XM_283804.6| PREDICTED: Mus musculus RIKEN cDNA 9830001H06 gene (9830001H06Rik),
            mRNA
          Length = 13602

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 64   cccatccctcccttcccgcc 83
            ||||||||||||||||||||
Sbjct: 7038 cccatccctcccttcccgcc 7057
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>gb|AC140193.3| Mus musculus BAC clone RP23-247C12 from chromosome 19, complete sequence
          Length = 173527

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 57     gccttggcccatccctcccttccc 80
              ||||||||||||||||| ||||||
Sbjct: 126806 gccttggcccatccctctcttccc 126829
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>ref|XM_532624.2| PREDICTED: Canis familiaris similar to chromodomain helicase DNA
           binding protein 8, transcript variant 1 (LOC475401),
           mRNA
          Length = 7415

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 ccctcaacccaaccagtgac 285
           ||||||||||||||||||||
Sbjct: 353 ccctcaacccaaccagtgac 372
to top
>ref|XM_803854.1| Trypanosoma cruzi strain CL Brener tyrosyl or methionyl-tRNA
           synthetase (Tc00.1047053506573.30) partial mRNA
          Length = 735

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 cctcctcctccgcagcagca 132
           ||||||||||||||||||||
Sbjct: 217 cctcctcctccgcagcagca 198
to top
>gb|AC122416.4| Mus musculus BAC clone RP24-157E17 from chromosome 9, complete sequence
          Length = 140024

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 464   gatggtgatctagttaccatcacttgca 491
             ||||||||||||||| ||| ||||||||
Sbjct: 16866 gatggtgatctagttcccagcacttgca 16893
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>gb|AC117225.3| Mus musculus BAC clone RP23-366F3 from 19, complete sequence
          Length = 149854

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 57     gccttggcccatccctcccttccc 80
              ||||||||||||||||| ||||||
Sbjct: 127112 gccttggcccatccctctcttccc 127089
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>emb|X97568.1|RNGRK4PCK Rattus norvegicus mRNA for G protein-coupled receptor kinase GRK4
          Length = 1997

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 102 cgcctccgtcgcctcctcctccgc 125
           |||||| |||||||||||||||||
Sbjct: 25  cgcctctgtcgcctcctcctccgc 2
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>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7
          Length = 348071

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 295    gctcattaacaggaaggttgtgac 318
              ||||||||||||||||| ||||||
Sbjct: 347447 gctcattaacaggaaggatgtgac 347470
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>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   gcctccgtcgcctcctcctc 122
             ||||||||||||||||||||
Sbjct: 85949 gcctccgtcgcctcctcctc 85968
to top
>emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026I12,
             complete sequence
          Length = 128574

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 102   cgcctccgtcgcctcctcctccgc 125
             |||| |||||||||||||||||||
Sbjct: 68150 cgccgccgtcgcctcctcctccgc 68127
to top
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17,
              complete sequence
          Length = 167269

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 102    cgcctccgtcgcctcctcctccgc 125
              ||||||| ||||||||||||||||
Sbjct: 117849 cgcctccttcgcctcctcctccgc 117872
to top
>emb|CR626905.5| Zebrafish DNA sequence from clone DKEY-85H21 in linkage group 15,
              complete sequence
          Length = 201465

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 522    gtgttggcatggatgtaaag 541
              ||||||||||||||||||||
Sbjct: 195395 gtgttggcatggatgtaaag 195376
to top
>gb|AC153857.7| Mus musculus 6 BAC RP23-158G17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 215780

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     gccgcccttcccccgccgcc 31
              ||||||||||||||||||||
Sbjct: 100887 gccgcccttcccccgccgcc 100868
to top
>dbj|AK147227.1| Mus musculus 15 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:M421021D03 product:hypothetical
            Cytochrome P450 containing protein, full insert sequence
          Length = 7868

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 64   cccatccctcccttcccgcc 83
            ||||||||||||||||||||
Sbjct: 6659 cccatccctcccttcccgcc 6678
to top
>gb|AF386649.1|AF386649 Homo sapiens bromodomain-containing 4 (BRD4) mRNA, complete cds
          Length = 5198

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 111  cgcctcctcctccgcagcagcaac 134
            ||||||| ||||||||||||||||
Sbjct: 2519 cgcctccacctccgcagcagcaac 2542
to top
>gb|AC078961.23| Homo sapiens 4 BAC RP11-486H4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 179762

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   atcttctgccaaggcttcaa 224
             ||||||||||||||||||||
Sbjct: 29070 atcttctgccaaggcttcaa 29089
to top
>gb|AC004798.1|AC004798 Homo sapiens chromosome 19, cosmid R31546, complete sequence
          Length = 42497

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 111  cgcctcctcctccgcagcagcaac 134
            ||||||| ||||||||||||||||
Sbjct: 9451 cgcctccacctccgcagcagcaac 9428
to top
>dbj|AK034818.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430042I16 product:hypothetical protein, full
           insert sequence
          Length = 1443

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  cccatccctcccttcccgcc 83
           ||||||||||||||||||||
Sbjct: 234 cccatccctcccttcccgcc 253
to top
>dbj|AK031493.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:6030440K09 product:hypothetical
            protein, full insert sequence
          Length = 3226

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 64   cccatccctcccttcccgcc 83
            ||||||||||||||||||||
Sbjct: 2027 cccatccctcccttcccgcc 2046
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 113      cctcctcctccgcagcagca 132
                ||||||||||||||||||||
Sbjct: 19514761 cctcctcctccgcagcagca 19514780
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 21       cccccgccgcccttggtgcc 40
                ||||||||||||||||||||
Sbjct: 20019981 cccccgccgcccttggtgcc 20020000
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 102      cgcctccgtcgcctcctcct 121
                ||||||||||||||||||||
Sbjct: 29361454 cgcctccgtcgcctcctcct 29361473
to top
>ref|NM_022928.1| Rattus norvegicus G protein-coupled receptor kinase 2, groucho gene
           related (Drosophila) (Gprk2l), mRNA
          Length = 1997

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 102 cgcctccgtcgcctcctcctccgc 125
           |||||| |||||||||||||||||
Sbjct: 25  cgcctctgtcgcctcctcctccgc 2
to top
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14,
              complete sequence
          Length = 142245

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 104    cctccgtcgcctcctcctccgcagcagc 131
              |||||| |||||||||||||||| ||||
Sbjct: 119348 cctccggcgcctcctcctccgcatcagc 119321
to top
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0621D05
          Length = 180250

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   cgcctccgtcgcctcctcct 121
             ||||||||||||||||||||
Sbjct: 72335 cgcctccgtcgcctcctcct 72354
to top
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence
          Length = 256992

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     ctcccttcccgccccttccc 90
              ||||||||||||||||||||
Sbjct: 178974 ctcccttcccgccccttccc 178993
to top
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0018H04
          Length = 142053

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    cgcctccgtcgcctcctcct 121
              ||||||||||||||||||||
Sbjct: 124252 cgcctccgtcgcctcctcct 124271
to top
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0488D02
          Length = 154537

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tcgcctccgtcgcctcctcc 120
             ||||||||||||||||||||
Sbjct: 34234 tcgcctccgtcgcctcctcc 34253
to top
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1163_C07
          Length = 107121

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    tcgcctccgtcgcctcctcc 120
              ||||||||||||||||||||
Sbjct: 102112 tcgcctccgtcgcctcctcc 102131
to top
>dbj|AK173052.1| Mus musculus mRNA for mKIAA0889 protein
          Length = 5051

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 64   cccatccctcccttcccgcc 83
            ||||||||||||||||||||
Sbjct: 3842 cccatccctcccttcccgcc 3861
to top
>dbj|AK106042.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E02, full
           insert sequence
          Length = 1721

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 tcgcctccgtcgcctcctcc 120
           ||||||||||||||||||||
Sbjct: 529 tcgcctccgtcgcctcctcc 548
to top
>dbj|AK073589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051K03, full
           insert sequence
          Length = 1111

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 104 cctccgtcgcctcctcctccgcagcagc 131
           |||||| |||||||||||||||| ||||
Sbjct: 311 cctccggcgcctcctcctccgcatcagc 284
to top
>dbj|AK066647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074A05, full
           insert sequence
          Length = 3273

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 cgcctccgtcgcctcctcct 121
           ||||||||||||||||||||
Sbjct: 257 cgcctccgtcgcctcctcct 276
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>dbj|AK059479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F03, full
           insert sequence
          Length = 1515

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 tcgcctccgtcgcctcctcc 120
           ||||||||||||||||||||
Sbjct: 414 tcgcctccgtcgcctcctcc 433
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>dbj|AP003850.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1793_E11
          Length = 101342

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    cccccgccgcccttggtgcc 40
             ||||||||||||||||||||
Sbjct: 53541 cccccgccgcccttggtgcc 53560
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>gb|BC092639.1| Rattus norvegicus p300/CBP-associated factor, mRNA (cDNA clone
            MGC:109373 IMAGE:7316752), complete cds
          Length = 2464

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 375  ctgaaaaatgcagcttccat 394
            ||||||||||||||||||||
Sbjct: 1161 ctgaaaaatgcagcttccat 1180
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>gb|DQ196107.1| Chlamydomonas reinhardtii pherophorin-C1 protein precursor, mRNA,
           complete cds
          Length = 2217

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 cctccgtcgcctcctcctcc 123
           ||||||||||||||||||||
Sbjct: 925 cctccgtcgcctcctcctcc 944
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>ref|NM_001024252.1| Rattus norvegicus p300/CBP-associated factor (Pcaf), mRNA
          Length = 2464

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 375  ctgaaaaatgcagcttccat 394
            ||||||||||||||||||||
Sbjct: 1161 ctgaaaaatgcagcttccat 1180
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 113      cctcctcctccgcagcagca 132
                ||||||||||||||||||||
Sbjct: 19440974 cctcctcctccgcagcagca 19440993
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>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144596

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   cctcctcctccgcagcagca 132
             ||||||||||||||||||||
Sbjct: 46942 cctcctcctccgcagcagca 46961
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>gb|AC124711.3| Mus musculus BAC clone RP24-100M12 from 12, complete sequence
          Length = 225134

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   gagctcagggaagttgtggc 414
             ||||||||||||||||||||
Sbjct: 94724 gagctcagggaagttgtggc 94705
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>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0076N15, complete sequence
          Length = 134307

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 104   cctccgtcgcctcctcctccgcagcagc 131
             |||||| |||||||||||||||| ||||
Sbjct: 47326 cctccggcgcctcctcctccgcatcagc 47299
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>emb|AL732474.8| Mouse DNA sequence from clone RP23-180I2 on chromosome 4, complete
             sequence
          Length = 151555

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 484   cacttgcacatcagaactcc 503
             ||||||||||||||||||||
Sbjct: 89605 cacttgcacatcagaactcc 89586
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>dbj|AB020810.1| Agkistrodon blomhoffi mRNA for BPP-CNP precursor homolog, complete
           cds
          Length = 1755

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 cctcctcctccgcagcagca 132
           ||||||||||||||||||||
Sbjct: 864 cctcctcctccgcagcagca 845
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>emb|AL669932.14| Mouse DNA sequence from clone RP23-430P1 on chromosome 2, complete
             sequence
          Length = 148257

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    cccatccctcccttcccgcc 83
             ||||||||||||||||||||
Sbjct: 81602 cccatccctcccttcccgcc 81583


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,488,158
Number of Sequences: 3902068
Number of extensions: 5488158
Number of successful extensions: 101910
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100956
Number of HSP's gapped (non-prelim): 954
length of query: 581
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 558
effective length of database: 17,143,297,704
effective search space: 9565960118832
effective search space used: 9565960118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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