ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags23n18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_470539.1| Oryza sativa (japonica cultivar-group), predic... 268 2e-68
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 268 2e-68
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
4gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome... 268 2e-68
5dbj|AK070967.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 2e-68
6gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome... 268 2e-68
7dbj|AK068487.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 5e-60
8emb|AL355304.12| Human DNA sequence from clone RP11-439L18 on ch... 42 2.4
9emb|AL158205.12| Human DNA sequence from clone RP11-177F4 on chr... 42 2.4
10emb|AL844854.6| Mouse DNA sequence from clone RP23-368I1 on chro... 42 2.4
11gb|AC111110.21| Mus musculus chromosome 1, clone RP23-201B13, co... 40 9.7
12gb|AC132584.5| Mus musculus BAC clone RP24-346B15 from chromosom... 40 9.7
13gb|AC165959.5| Mus musculus BAC clone RP23-390B24 from chromosom... 40 9.7
14gb|AC153600.8| Mus musculus 6 BAC RP23-380C10 (Roswell Park Canc... 40 9.7
15gb|AC092637.2| Homo sapiens BAC clone RP11-358M3 from 7, complet... 40 9.7
16emb|Z95329.1|HS522O2 Human DNA sequence from clone RP3-522O2 on ... 40 9.7
17emb|AL596184.9| Human DNA sequence from clone CTD-2552G1 on chro... 40 9.7
18emb|AL590240.5| Human DNA sequence from clone RP11-266I3 on chro... 40 9.7
19emb|AL449403.11| Human DNA sequence from clone RP11-569G13 on ch... 40 9.7
20emb|AL031054.1|HS48G12 Human DNA sequence from clone RP1-48G12 o... 40 9.7
21emb|AJ400878.1|MMU400878 Mus musculus Ascl3 gene, Cegp1 gene, D7... 40 9.7
22emb|BX120000.8| Zebrafish DNA sequence from clone CH211-214C13 i... 40 9.7
23gb|AC155328.5| Mus musculus 6 BAC RP24-75K10 (Roswell Park Cance... 40 9.7
24gb|AC073650.44| Homo sapiens 12 BAC RP11-44F24 (Roswell Park Can... 40 9.7
25gb|AC110266.15| Mus musculus chromosome 1, clone RP23-319C1, com... 40 9.7
26emb|AL845457.16| Mouse DNA sequence from clone RP23-34E24 on chr... 40 9.7
27gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, comple... 40 9.7
28gb|AC138306.4| Mus musculus BAC clone RP24-240E9 from 16, comple... 40 9.7
29gb|AC154781.2| Mus musculus BAC clone RP24-463K5 from 16, comple... 40 9.7
30gb|AC145082.10| Mus musculus chromosome 3, clone RP24-333B11, co... 40 9.7
31gb|AC163743.6| Mus musculus BAC clone RP23-415J4 from chromosome... 40 9.7

>ref|XM_470539.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1746

 Score =  268 bits (135), Expect = 2e-68
 Identities = 347/417 (83%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                       
Query: 79  atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 138
           |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 205 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 264

                                                                       
Query: 139 gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 198
           ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 265 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 324

                                                                       
Query: 199 acaaccaagattcctgtttcagagtcctcaaaggaaatcagcgcagaccaaccagagtct 258
           ||| ||| |||| |||| ||||  ||||| || || |  |  ||||| |||| |||  ||
Sbjct: 325 acatccaggatttctgtatcaggatcctccaaagacactattgcagatcaacaagatcct 384

                                                                       
Query: 259 gt---accaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagat 315
           ||   |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 385 gttataccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagat 444

                                                                       
Query: 316 gatatcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctt 375
           ||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||
Sbjct: 445 gatattacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatt 504

                                                                       
Query: 376 tcactcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccag 435
           |||||||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||
Sbjct: 505 tcactcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccag 564

                                                                    
Query: 436 acatcaagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 492
           ||||| |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 565 acatcgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 621



 Score =  143 bits (72), Expect = 9e-31
 Identities = 120/136 (88%)
 Strand = Plus / Plus

                                                                       
Query: 528 agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 587
           |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 669 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 728

                                                                       
Query: 588 gacagtaagaaacggtggacaatatggtacaaacagaagggatgctagtcactacaatgg 647
            ||||||||||| ||||  |||||   | |||||||||||||||| || || ||||||||
Sbjct: 729 aacagtaagaaatggtgtgcaatacaatgcaaacagaagggatgccagccattacaatgg 788

                           
Query: 648 agattctagcattgga 663
           ||||||||||||||||
Sbjct: 789 agattctagcattgga 804



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  268 bits (135), Expect = 2e-68
 Identities = 347/417 (83%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                           
Query: 79      atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 138
               |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 4187226 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 4187285

                                                                           
Query: 139     gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 198
               ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 4187286 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 4187345

                                                                           
Query: 199     acaaccaagattcctgtttcagagtcctcaaaggaaatcagcgcagaccaaccagagtct 258
               ||| ||| |||| |||| ||||  ||||| || || |  |  ||||| |||| |||  ||
Sbjct: 4187346 acatccaggatttctgtatcaggatcctccaaagacactattgcagatcaacaagatcct 4187405

                                                                           
Query: 259     gt---accaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagat 315
               ||   |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 4187406 gttataccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagat 4187465

                                                                           
Query: 316     gatatcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctt 375
               ||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||
Sbjct: 4187466 gatattacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatt 4187525

                                                                           
Query: 376     tcactcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccag 435
               |||||||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||
Sbjct: 4187526 tcactcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccag 4187585

                                                                        
Query: 436     acatcaagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 492
               ||||| |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 4187586 acatcgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 4187642



 Score =  141 bits (71), Expect = 4e-30
 Identities = 119/135 (88%)
 Strand = Plus / Plus

                                                                           
Query: 528     agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 587
               |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 4187690 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 4187749

                                                                           
Query: 588     gacagtaagaaacggtggacaatatggtacaaacagaagggatgctagtcactacaatgg 647
                ||||||||||| ||||  |||||   | |||||||||||||||| || || ||||||||
Sbjct: 4187750 aacagtaagaaatggtgtgcaatacaatgcaaacagaagggatgccagccattacaatgg 4187809

                              
Query: 648     agattctagcattgg 662
               |||||||||||||||
Sbjct: 4187810 agattctagcattgg 4187824



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  268 bits (135), Expect = 2e-68
 Identities = 347/417 (83%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                           
Query: 79      atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 138
               |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 4187335 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 4187394

                                                                           
Query: 139     gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 198
               ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 4187395 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 4187454

                                                                           
Query: 199     acaaccaagattcctgtttcagagtcctcaaaggaaatcagcgcagaccaaccagagtct 258
               ||| ||| |||| |||| ||||  ||||| || || |  |  ||||| |||| |||  ||
Sbjct: 4187455 acatccaggatttctgtatcaggatcctccaaagacactattgcagatcaacaagatcct 4187514

                                                                           
Query: 259     gt---accaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagat 315
               ||   |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 4187515 gttataccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagat 4187574

                                                                           
Query: 316     gatatcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctt 375
               ||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||
Sbjct: 4187575 gatattacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatt 4187634

                                                                           
Query: 376     tcactcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccag 435
               |||||||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||
Sbjct: 4187635 tcactcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccag 4187694

                                                                        
Query: 436     acatcaagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 492
               ||||| |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 4187695 acatcgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 4187751



 Score =  141 bits (71), Expect = 4e-30
 Identities = 119/135 (88%)
 Strand = Plus / Plus

                                                                           
Query: 528     agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 587
               |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 4187799 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 4187858

                                                                           
Query: 588     gacagtaagaaacggtggacaatatggtacaaacagaagggatgctagtcactacaatgg 647
                ||||||||||| ||||  |||||   | |||||||||||||||| || || ||||||||
Sbjct: 4187859 aacagtaagaaatggtgtgcaatacaatgcaaacagaagggatgccagccattacaatgg 4187918

                              
Query: 648     agattctagcattgg 662
               |||||||||||||||
Sbjct: 4187919 agattctagcattgg 4187933



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>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0050H14, complete sequence
          Length = 142245

 Score =  268 bits (135), Expect = 2e-68
 Identities = 347/417 (83%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                         
Query: 79    atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 138
             |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 87863 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 87922

                                                                         
Query: 139   gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 198
             ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 87923 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 87982

                                                                         
Query: 199   acaaccaagattcctgtttcagagtcctcaaaggaaatcagcgcagaccaaccagagtct 258
             ||| ||| |||| |||| ||||  ||||| || || |  |  ||||| |||| |||  ||
Sbjct: 87983 acatccaggatttctgtatcaggatcctccaaagacactattgcagatcaacaagatcct 88042

                                                                         
Query: 259   gt---accaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagat 315
             ||   |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 88043 gttataccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagat 88102

                                                                         
Query: 316   gatatcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctt 375
             ||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||
Sbjct: 88103 gatattacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatt 88162

                                                                         
Query: 376   tcactcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccag 435
             |||||||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||
Sbjct: 88163 tcactcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccag 88222

                                                                      
Query: 436   acatcaagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 492
             ||||| |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 88223 acatcgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 88279



 Score =  141 bits (71), Expect = 4e-30
 Identities = 119/135 (88%)
 Strand = Plus / Plus

                                                                         
Query: 528   agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 587
             |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 88327 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 88386

                                                                         
Query: 588   gacagtaagaaacggtggacaatatggtacaaacagaagggatgctagtcactacaatgg 647
              ||||||||||| ||||  |||||   | |||||||||||||||| || || ||||||||
Sbjct: 88387 aacagtaagaaatggtgtgcaatacaatgcaaacagaagggatgccagccattacaatgg 88446

                            
Query: 648   agattctagcattgg 662
             |||||||||||||||
Sbjct: 88447 agattctagcattgg 88461



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>dbj|AK070967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067F09, full
            insert sequence
          Length = 3799

 Score =  268 bits (135), Expect = 2e-68
 Identities = 347/417 (83%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                        
Query: 79   atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 138
            |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 2027 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 2086

                                                                        
Query: 139  gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 198
            ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 2087 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 2146

                                                                        
Query: 199  acaaccaagattcctgtttcagagtcctcaaaggaaatcagcgcagaccaaccagagtct 258
            ||| ||| |||| |||| ||||  ||||| || || |  |  ||||| |||| |||  ||
Sbjct: 2147 acatccaggatttctgtatcaggatcctccaaagacactattgcagatcaacaagatcct 2206

                                                                        
Query: 259  gt---accaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagat 315
            ||   |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 2207 gttataccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagat 2266

                                                                        
Query: 316  gatatcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctt 375
            ||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||
Sbjct: 2267 gatattacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatt 2326

                                                                        
Query: 376  tcactcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccag 435
            |||||||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||
Sbjct: 2327 tcactcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccag 2386

                                                                     
Query: 436  acatcaagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 492
            ||||| |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 2387 acatcgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 2443



 Score =  143 bits (72), Expect = 9e-31
 Identities = 120/136 (88%)
 Strand = Plus / Plus

                                                                        
Query: 528  agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 587
            |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 2491 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 2550

                                                                        
Query: 588  gacagtaagaaacggtggacaatatggtacaaacagaagggatgctagtcactacaatgg 647
             ||||||||||| ||||  |||||   | |||||||||||||||| || || ||||||||
Sbjct: 2551 aacagtaagaaatggtgtgcaatacaatgcaaacagaagggatgccagccattacaatgg 2610

                            
Query: 648  agattctagcattgga 663
            ||||||||||||||||
Sbjct: 2611 agattctagcattgga 2626



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>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0076N15, complete sequence
          Length = 134307

 Score =  268 bits (135), Expect = 2e-68
 Identities = 347/417 (83%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                         
Query: 79    atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 138
             |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 15841 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 15900

                                                                         
Query: 139   gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 198
             ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 15901 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 15960

                                                                         
Query: 199   acaaccaagattcctgtttcagagtcctcaaaggaaatcagcgcagaccaaccagagtct 258
             ||| ||| |||| |||| ||||  ||||| || || |  |  ||||| |||| |||  ||
Sbjct: 15961 acatccaggatttctgtatcaggatcctccaaagacactattgcagatcaacaagatcct 16020

                                                                         
Query: 259   gt---accaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagat 315
             ||   |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 16021 gttataccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagat 16080

                                                                         
Query: 316   gatatcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctt 375
             ||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||
Sbjct: 16081 gatattacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatt 16140

                                                                         
Query: 376   tcactcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccag 435
             |||||||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||
Sbjct: 16141 tcactcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccag 16200

                                                                      
Query: 436   acatcaagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 492
             ||||| |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 16201 acatcgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 16257



 Score =  141 bits (71), Expect = 4e-30
 Identities = 119/135 (88%)
 Strand = Plus / Plus

                                                                         
Query: 528   agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 587
             |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 16305 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 16364

                                                                         
Query: 588   gacagtaagaaacggtggacaatatggtacaaacagaagggatgctagtcactacaatgg 647
              ||||||||||| ||||  |||||   | |||||||||||||||| || || ||||||||
Sbjct: 16365 aacagtaagaaatggtgtgcaatacaatgcaaacagaagggatgccagccattacaatgg 16424

                            
Query: 648   agattctagcattgg 662
             |||||||||||||||
Sbjct: 16425 agattctagcattgg 16439



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>dbj|AK068487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156N12, full
           insert sequence
          Length = 2169

 Score =  240 bits (121), Expect = 5e-60
 Identities = 205/233 (87%)
 Strand = Plus / Plus

                                                                       
Query: 260 taccaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagatgata 319
           ||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 582 taccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagatgata 641

                                                                       
Query: 320 tcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctttcac 379
           | |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||||||
Sbjct: 642 ttacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatttcac 701

                                                                       
Query: 380 tcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccagacat 439
           |||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 702 tcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccagacat 761

                                                                
Query: 440 caagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 492
           | |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 762 cgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 814



 Score =  143 bits (72), Expect = 9e-31
 Identities = 120/136 (88%)
 Strand = Plus / Plus

                                                                       
Query: 528 agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 587
           |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 862 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 921

                                                                       
Query: 588 gacagtaagaaacggtggacaatatggtacaaacagaagggatgctagtcactacaatgg 647
            ||||||||||| ||||  |||||   | |||||||||||||||| || || ||||||||
Sbjct: 922 aacagtaagaaatggtgtgcaatacaatgcaaacagaagggatgccagccattacaatgg 981

                           
Query: 648 agattctagcattgga 663
           ||||||||||||||||
Sbjct: 982 agattctagcattgga 997



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 116/142 (81%)
 Strand = Plus / Plus

                                                                       
Query: 79  atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 138
           |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 398 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 457

                                                                       
Query: 139 gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 198
           ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 458 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 517

                                 
Query: 199 acaaccaagattcctgtttcag 220
           ||| ||| |||| |||| ||||
Sbjct: 518 acatccaggatttctgtatcag 539



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>emb|AL355304.12| Human DNA sequence from clone RP11-439L18 on chromosome 6q23.2-24.3
             Contains two putative novel genes, part of a novel gene
             (FLJ32928) and two CpG islands, complete sequence
          Length = 76581

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 88    gaagaaaggaaaataagtttgataa 112
             |||||||| ||||||||||||||||
Sbjct: 10394 gaagaaagaaaaataagtttgataa 10418



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>emb|AL158205.12| Human DNA sequence from clone RP11-177F4 on chromosome 9 Contains a CpG
             island, complete sequence
          Length = 68171

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 94    aggaaaataagtttgataaac 114
             |||||||||||||||||||||
Sbjct: 10126 aggaaaataagtttgataaac 10146



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>emb|AL844854.6| Mouse DNA sequence from clone RP23-368I1 on chromosome 2, complete
             sequence
          Length = 185135

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    cattgaagaaaggaaaataag 104
             |||||||||||||||||||||
Sbjct: 66471 cattgaagaaaggaaaataag 66451



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>gb|AC111110.21| Mus musculus chromosome 1, clone RP23-201B13, complete sequence
          Length = 246043

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 157   tcatgccttagatgtgtgagtgat 180
             ||||||||||||||||| ||||||
Sbjct: 38697 tcatgccttagatgtgtcagtgat 38674



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>gb|AC132584.5| Mus musculus BAC clone RP24-346B15 from chromosome 7, complete sequence
          Length = 227856

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 582   ggtaaagacagtaagaaacg 601
             ||||||||||||||||||||
Sbjct: 95714 ggtaaagacagtaagaaacg 95733



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>gb|AC165959.5| Mus musculus BAC clone RP23-390B24 from chromosome 7, complete sequence
          Length = 217760

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 582   ggtaaagacagtaagaaacg 601
             ||||||||||||||||||||
Sbjct: 43973 ggtaaagacagtaagaaacg 43992



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>gb|AC153600.8| Mus musculus 6 BAC RP23-380C10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 194848

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 405    ctttggtgcttcattatttt 424
              ||||||||||||||||||||
Sbjct: 155109 ctttggtgcttcattatttt 155090



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 547   actgcaagtactatgagtcc 566
             ||||||||||||||||||||
Sbjct: 13883 actgcaagtactatgagtcc 13902



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>gb|AC092637.2| Homo sapiens BAC clone RP11-358M3 from 7, complete sequence
          Length = 126643

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 411   tgcttcattattttctccaa 430
             ||||||||||||||||||||
Sbjct: 62810 tgcttcattattttctccaa 62791



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>emb|Z95329.1|HS522O2 Human DNA sequence from clone RP3-522O2 on chromosome 6q21 Contains the
             3' end of the BVES gene for blood vessel epicardial
             substance and part of the gene for a novel protein similar
             to FLJ12457, complete sequence
          Length = 102837

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 87    tgaagaaaggaaaataagtttgat 110
             |||||| |||||||||||||||||
Sbjct: 34102 tgaagagaggaaaataagtttgat 34125



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>emb|AL596184.9| Human DNA sequence from clone CTD-2552G1 on chromosome 6, complete
             sequence
          Length = 65978

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 88    gaagaaaggaaaataagtttgataaaca 115
             ||||||| ||||||||||||| ||||||
Sbjct: 60338 gaagaaaagaaaataagtttggtaaaca 60311



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>emb|AL590240.5| Human DNA sequence from clone RP11-266I3 on chromosome X Contains a
              likely ortholog of mouse hepatoma-derived growth factor
              related protein 3 pseudogene (HDGFRP3), a novel protein
              similar to PAGE-5 protein (LOC203569), a novel protein
              similar to PAGE-5 protein (LOC139795), gene FLJ20434, a
              cytochrome c oxidase I (MTCO1) pseudogene, a G antigen,
              family D pseudogene and a CpG island, complete sequence
          Length = 130005

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     tgtcaaattctgaattctgc 50
              ||||||||||||||||||||
Sbjct: 127627 tgtcaaattctgaattctgc 127646



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>emb|AL449403.11| Human DNA sequence from clone RP11-569G13 on chromosome 9 Contains a
             eukaryotic translation initiation factor 4B (EIF4B)
             pseudogene and part of a novel gene, complete sequence
          Length = 173916

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   accatgcttctccatttgtt 471
             ||||||||||||||||||||
Sbjct: 63243 accatgcttctccatttgtt 63224



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>emb|AL031054.1|HS48G12 Human DNA sequence from clone RP1-48G12 on chromosome Xq27.1-27.3
             Contains a CpG island, complete sequence
          Length = 199016

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ctgaattctgctgaattgct 59
             ||||||||||||||||||||
Sbjct: 24318 ctgaattctgctgaattgct 24299



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>emb|AJ400878.1|MMU400878 Mus musculus Ascl3 gene, Cegp1 gene, D7H11orf14 gene, D7H11orf15 gene,
              D7H11orf16 gene and C11orf17 gene
          Length = 234169

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 582    ggtaaagacagtaagaaacg 601
              ||||||||||||||||||||
Sbjct: 165664 ggtaaagacagtaagaaacg 165645



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>emb|BX120000.8| Zebrafish DNA sequence from clone CH211-214C13 in linkage group 17,
            complete sequence
          Length = 214728

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  tgtgagtgatgcttcaaaca 190
            ||||||||||||||||||||
Sbjct: 4303 tgtgagtgatgcttcaaaca 4284



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>gb|AC155328.5| Mus musculus 6 BAC RP24-75K10 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 216930

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 547   actgcaagtactatgagtcc 566
             ||||||||||||||||||||
Sbjct: 96821 actgcaagtactatgagtcc 96840



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>gb|AC073650.44| Homo sapiens 12 BAC RP11-44F24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 91200

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   agagtcctcaaaggaaatca 238
             ||||||||||||||||||||
Sbjct: 48462 agagtcctcaaaggaaatca 48481



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>gb|AC110266.15| Mus musculus chromosome 1, clone RP23-319C1, complete sequence
          Length = 177482

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 157    tcatgccttagatgtgtgagtgat 180
              ||||||||||||||||| ||||||
Sbjct: 136466 tcatgccttagatgtgtcagtgat 136443



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>emb|AL845457.16| Mouse DNA sequence from clone RP23-34E24 on chromosome 2, complete
             sequence
          Length = 221009

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   agaatgcagcaccatgcttc 461
             ||||||||||||||||||||
Sbjct: 19083 agaatgcagcaccatgcttc 19064



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>gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, complete sequence
          Length = 198847

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     aaaggaaaataagtttgataaaca 115
              |||||||||| |||||||||||||
Sbjct: 190828 aaaggaaaatgagtttgataaaca 190851



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>gb|AC138306.4| Mus musculus BAC clone RP24-240E9 from 16, complete sequence
          Length = 170196

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    tgcttcattattttctccaa 430
              ||||||||||||||||||||
Sbjct: 121681 tgcttcattattttctccaa 121700



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>gb|AC154781.2| Mus musculus BAC clone RP24-463K5 from 16, complete sequence
          Length = 173258

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   tgcttcattattttctccaa 430
             ||||||||||||||||||||
Sbjct: 33060 tgcttcattattttctccaa 33079



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>gb|AC145082.10| Mus musculus chromosome 3, clone RP24-333B11, complete sequence
          Length = 168482

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   tcaagaatgcagcaccatgc 458
             ||||||||||||||||||||
Sbjct: 41067 tcaagaatgcagcaccatgc 41048



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>gb|AC163743.6| Mus musculus BAC clone RP23-415J4 from chromosome 13, complete sequence
          Length = 198305

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 92    aaaggaaaataagtttgataaaca 115
             |||||||||| |||||||||||||
Sbjct: 70908 aaaggaaaatgagtttgataaaca 70931


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,948,944
Number of Sequences: 3902068
Number of extensions: 6948944
Number of successful extensions: 135600
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135398
Number of HSP's gapped (non-prelim): 188
length of query: 706
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 683
effective length of database: 17,143,297,704
effective search space: 11708872331832
effective search space used: 11708872331832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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