ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags23n11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_549856.1| Oryza sativa (japonica cultivar-group), mRNA 155 2e-34
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
3dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
4dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5dbj|AK070363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
6gb|AY107854.1| Zea mays PCO142176 mRNA sequence 82 2e-12
7ref|XM_773667.1| Giardia lamblia ATCC 50803 hypothetical protein... 48 0.034
8gb|AC134409.12| Mus musculus chromosome 5, clone RP24-355F10, co... 44 0.53
9gb|AC145882.3| Pan troglodytes BAC clone RP43-7E19 from 7, compl... 44 0.53
10gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome 44 0.53
11gb|DQ180391.1| Human herpesvirus 5 isolate D2 DNA polymerase gen... 44 0.53
12gb|DQ180379.1| Human herpesvirus 5 isolate D3 DNA polymerase gen... 44 0.53
13gb|DQ180362.1| Human herpesvirus 5 isolate D52 DNA polymerase ge... 44 0.53
14gb|AY486473.1|AY486470S04 Human herpesvirus 5 strain Toledo geno... 44 0.53
15gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete s... 44 0.53
16gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete seq... 44 0.53
17gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequ... 44 0.53
18gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete ... 44 0.53
19gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequ... 44 0.53
20gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete s... 44 0.53
21gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome 44 0.53
22gb|AY327256.1| Human herpesvirus 5 strain ATCC-VR977 DNA polymer... 44 0.53
23emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complet... 44 0.53
24gb|AF291828.1| Human herpesvirus 5 isolate E795 DNA polymerase g... 44 0.53
25gb|AF133628.1|AF133628 Human herpesvirus 5 isolate AW-J DNA poly... 44 0.53
26gb|AF133627.1|AF133627 Human herpesvirus 5 isolate AW-I DNA poly... 44 0.53
27gb|AF133626.1|AF133626 Human herpesvirus 5 isolate AW-H DNA poly... 44 0.53
28gb|AF133625.1|AF133625 Human herpesvirus 5 isolate AW-G DNA poly... 44 0.53
29gb|AF133624.1|AF133624 Human herpesvirus 5 isolate AW-F DNA poly... 44 0.53
30gb|AF133623.1|AF133623 Human herpesvirus 5 isolate AW-E DNA poly... 44 0.53
31gb|AF133622.1|AF133622 Human herpesvirus 5 isolate AW-D DNA poly... 44 0.53
32gb|AF133621.1|AF133621 Human herpesvirus 5 isolate AW-C DNA poly... 44 0.53
33gb|AF133620.1|AF133620 Human herpesvirus 5 isolate AW-B DNA poly... 44 0.53
34gb|AF133619.1|AF133619 Human herpesvirus 5 isolate CC-10 DNA pol... 44 0.53
35gb|AF133618.1|AF133618 Human herpesvirus 5 isolate CC-9 DNA poly... 44 0.53
36gb|AF133617.1|AF133617 Human herpesvirus 5 isolate CC-8 DNA poly... 44 0.53
37gb|AF133616.1|AF133616 Human herpesvirus 5 isolate CC-7 DNA poly... 44 0.53
38gb|AF133615.1|AF133615 Human herpesvirus 5 isolate CC-6 DNA poly... 44 0.53
39gb|AF133614.1|AF133614 Human herpesvirus 5 isolate CC-5 DNA poly... 44 0.53
40gb|AF133613.1|AF133613 Human herpesvirus 5 isolate CC-4 DNA poly... 44 0.53
41gb|AF133612.1|AF133612 Human herpesvirus 5 isolate NL-MG DNA pol... 44 0.53
42gb|AF133611.1|AF133611 Human herpesvirus 5 isolate NLPET8 DNA po... 44 0.53
43gb|AF133610.1|AF133610 Human herpesvirus 5 isolate NLMCG DNA pol... 44 0.53
44gb|AF133609.1|AF133609 Human herpesvirus 5 isolate NL9 DNA polym... 44 0.53
45gb|AF133608.1|AF133608 Human herpesvirus 5 isolate NL8 DNA polym... 44 0.53
46gb|AF133607.1|AF133607 Human herpesvirus 5 isolate NL6A DNA poly... 44 0.53
47gb|AF133606.1|AF133606 Human herpesvirus 5 isolate NL4 DNA polym... 44 0.53
48gb|AF133605.1|AF133605 Human herpesvirus 5 isolate NL2 DNA polym... 44 0.53
49gb|AF133604.1|AF133604 Human herpesvirus 5 isolate NL14 DNA poly... 44 0.53
50gb|AF133603.1|AF133603 Human herpesvirus 5 isolate NL13 DNA poly... 44 0.53
51gb|AF133602.1|AF133602 Human herpesvirus 5 isolate NL1 DNA polym... 44 0.53
52gb|AF133601.1|AF133601 Human herpesvirus 5 isolate E756 DNA poly... 44 0.53
53gb|AF133599.1|AF133599 Human herpesvirus 5 isolate E761 DNA poly... 44 0.53
54gb|AF133598.1|AF133598 Human herpesvirus 5 isolate E760 DNA poly... 44 0.53
55gb|AF133597.1|AF133597 Human herpesvirus 5 isolate E759 DNA poly... 44 0.53
56gb|AF133596.1|AF133596 Human herpesvirus 5 isolate E545 DNA poly... 44 0.53
57gb|AF133595.1|AF133595 Human herpesvirus 5 isolate E540 DNA poly... 44 0.53
58gb|AF133593.1|AF133593 Human herpesvirus 5 isolate E428 DNA poly... 44 0.53
59gb|AF133592.1|AF133592 Human herpesvirus 5 isolate C336 DNA poly... 44 0.53
60gb|AF133591.1|AF133591 Human herpesvirus 5 isolate C005 DNA poly... 44 0.53
61gb|AF133590.1|AF133590 Human herpesvirus 5 isolate C128 DNA poly... 44 0.53
62gb|AF133589.1|AF133589 Human herpesvirus 5 isolate C076 DNA poly... 44 0.53
63gb|M17209.1|HS5VF Human cytomegalovirus F fragment DNA encoding ... 44 0.53
64gb|M14709.1|HS5POL Human cytomegalovirus (HCMV) DNA polymerase (... 44 0.53
65dbj|D14981.1|HS5TS256 Human cytomegalovirus gene for DNA polymer... 44 0.53
66dbj|D14980.1|HS5TOWNE Human cytomegalovirus gene for DNA polymer... 44 0.53
67gb|AC131989.8| Mus musculus chromosome 14, clone RP24-186N15, co... 42 2.1
68gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 8.3
69gb|AC148330.2| Mus musculus BAC clone RP24-320F10 from chromosom... 40 8.3
70gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 8.3
71gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 8.3
72gb|AC140455.2| Mus musculus BAC clone RP23-24B2 from chromosome ... 40 8.3
73gb|AC117260.3| Mus musculus BAC clone RP24-498G10 from chromosom... 40 8.3
74gb|CP000001.1| Bacillus cereus E33L, complete genome 40 8.3
75ref|NM_062162.3| Caenorhabditis elegans Y49F6B.2 (Y49F6B.2) mRNA... 40 8.3
76gb|AC006790.2| Caenorhabditis elegans cosmid Y49F6B, complete se... 40 8.3
77dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 8.3
78gb|U23066.1|PAU23066 Persea americana flavanone 3-hydroxylase mR... 40 8.3
79gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 8.3 
>ref|XM_549856.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2381

 Score =  155 bits (78), Expect = 2e-34
 Identities = 254/315 (80%)
 Strand = Plus / Plus

                                                                        
Query: 196  tccagctaaggcagagactgagagttcaccggacagcagtgttttatctgaagccattgc 255
            ||||||||||| ||||| ||| || |||  ||| || |||| | ||||||| | |||| |
Sbjct: 782  tccagctaaggaagagaatgaaagctcattggaaagtagtgctatatctgagggcattac 841

                                                                        
Query: 256  agaggaagcaaacacggataccaaattaaaaggaaatgaagatgtcgaggagaaagcgca 315
             || ||||| || || ||||| | |||||| ||| |||||||||| ||||| ||||  ||
Sbjct: 842  cgatgaagcgaatacagatactacattaaagggagatgaagatgttgaggataaagaaca 901

                                                                        
Query: 316  ggatactggaagaaccaaggaaagtggcgttgaagggttgaaaagtgttctgaannnnnn 375
             |||  ||| |   ||||||| ||| | ||||||||||||||||| ||||||||      
Sbjct: 902  agatgttggtaacgccaaggatagtagtgttgaagggttgaaaagcgttctgaatttctt 961

                                                                        
Query: 376  naagtcccggattcccgagttcaaagttcaagtcataaacgtggaggtgcccgaggaagc 435
             ||||| |||||||| || |||||||||||||| ||||| || || ||| | ||||||||
Sbjct: 962  caagtctcggattcctgaattcaaagttcaagtaataaatgtagatgtgtctgaggaagc 1021

                                                                        
Query: 436  tgagttagttgcggattcgtcagaagagttagtgcaagatgatgtgaagagcacgtcaga 495
            ||| |||| | | |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1022 tgaattagcttcagattcgtcagaagaattagtgcaagatgatgtgaagagcacgtcaga 1081

                           
Query: 496  gagttcgttggaaga 510
            ||  || ||||||||
Sbjct: 1082 gaactcattggaaga 1096



 Score =  103 bits (52), Expect = 7e-19
 Identities = 131/156 (83%), Gaps = 1/156 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggtgtcgggagatacgtcgccaagnagctacagcccaaggcaattgatcactgcatcttc 63
           ||||| |||||||| || || ||| |||| |||||||||||||||| | |||||||| ||
Sbjct: 594 ggtgttgggagatatgtggctaag-agcttcagcccaaggcaattggttactgcatcgtc 652

                                                                       
Query: 64  agggagcccactatttgaaatattcctcgtcagagacgaagacgagacgtacacaatgaa 123
           ||| |  ||| |||||||||| ||||| |||||||| || || ||||| || ||||||||
Sbjct: 653 aggaactccattatttgaaattttccttgtcagagatgacgatgagacatatacaatgaa 712

                                               
Query: 124 ggtggtacacttgcgaccgacaaaaggagcttcaag 159
           ||| |||||| ||||||| ||||||||  |||||||
Sbjct: 713 ggttgtacacatgcgaccaacaaaaggcacttcaag 748
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score =  155 bits (78), Expect = 2e-34
 Identities = 254/315 (80%)
 Strand = Plus / Minus

                                                                          
Query: 196    tccagctaaggcagagactgagagttcaccggacagcagtgttttatctgaagccattgc 255
              ||||||||||| ||||| ||| || |||  ||| || |||| | ||||||| | |||| |
Sbjct: 418221 tccagctaaggaagagaatgaaagctcattggaaagtagtgctatatctgagggcattac 418162

                                                                          
Query: 256    agaggaagcaaacacggataccaaattaaaaggaaatgaagatgtcgaggagaaagcgca 315
               || ||||| || || ||||| | |||||| ||| |||||||||| ||||| ||||  ||
Sbjct: 418161 cgatgaagcgaatacagatactacattaaagggagatgaagatgttgaggataaagaaca 418102

                                                                          
Query: 316    ggatactggaagaaccaaggaaagtggcgttgaagggttgaaaagtgttctgaannnnnn 375
               |||  ||| |   ||||||| ||| | ||||||||||||||||| ||||||||      
Sbjct: 418101 agatgttggtaacgccaaggatagtagtgttgaagggttgaaaagcgttctgaatttctt 418042

                                                                          
Query: 376    naagtcccggattcccgagttcaaagttcaagtcataaacgtggaggtgcccgaggaagc 435
               ||||| |||||||| || |||||||||||||| ||||| || || ||| | ||||||||
Sbjct: 418041 caagtctcggattcctgaattcaaagttcaagtaataaatgtagatgtgtctgaggaagc 417982

                                                                          
Query: 436    tgagttagttgcggattcgtcagaagagttagtgcaagatgatgtgaagagcacgtcaga 495
              ||| |||| | | |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 417981 tgaattagcttcagattcgtcagaagaattagtgcaagatgatgtgaagagcacgtcaga 417922

                             
Query: 496    gagttcgttggaaga 510
              ||  || ||||||||
Sbjct: 417921 gaactcattggaaga 417907



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                          
Query: 41     aggcaattgatcactgcatcttcagggagcccactatttgaaatattcctcgtcagagac 100
              ||||||||| | |||||||| ||||| |  ||| |||||||||| ||||| |||||||| 
Sbjct: 418491 aggcaattggttactgcatcgtcaggaactccattatttgaaattttccttgtcagagat 418432

                                         
Query: 101    gaagacgagacgtacacaatgaaggtg 127
              || || ||||| || ||||||||||||
Sbjct: 418431 gacgatgagacatatacaatgaaggtg 418405
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>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0005A05
          Length = 190834

 Score =  155 bits (78), Expect = 2e-34
 Identities = 254/315 (80%)
 Strand = Plus / Minus

                                                                          
Query: 196    tccagctaaggcagagactgagagttcaccggacagcagtgttttatctgaagccattgc 255
              ||||||||||| ||||| ||| || |||  ||| || |||| | ||||||| | |||| |
Sbjct: 170059 tccagctaaggaagagaatgaaagctcattggaaagtagtgctatatctgagggcattac 170000

                                                                          
Query: 256    agaggaagcaaacacggataccaaattaaaaggaaatgaagatgtcgaggagaaagcgca 315
               || ||||| || || ||||| | |||||| ||| |||||||||| ||||| ||||  ||
Sbjct: 169999 cgatgaagcgaatacagatactacattaaagggagatgaagatgttgaggataaagaaca 169940

                                                                          
Query: 316    ggatactggaagaaccaaggaaagtggcgttgaagggttgaaaagtgttctgaannnnnn 375
               |||  ||| |   ||||||| ||| | ||||||||||||||||| ||||||||      
Sbjct: 169939 agatgttggtaacgccaaggatagtagtgttgaagggttgaaaagcgttctgaatttctt 169880

                                                                          
Query: 376    naagtcccggattcccgagttcaaagttcaagtcataaacgtggaggtgcccgaggaagc 435
               ||||| |||||||| || |||||||||||||| ||||| || || ||| | ||||||||
Sbjct: 169879 caagtctcggattcctgaattcaaagttcaagtaataaatgtagatgtgtctgaggaagc 169820

                                                                          
Query: 436    tgagttagttgcggattcgtcagaagagttagtgcaagatgatgtgaagagcacgtcaga 495
              ||| |||| | | |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 169819 tgaattagcttcagattcgtcagaagaattagtgcaagatgatgtgaagagcacgtcaga 169760

                             
Query: 496    gagttcgttggaaga 510
              ||  || ||||||||
Sbjct: 169759 gaactcattggaaga 169745



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                          
Query: 41     aggcaattgatcactgcatcttcagggagcccactatttgaaatattcctcgtcagagac 100
              ||||||||| | |||||||| ||||| |  ||| |||||||||| ||||| |||||||| 
Sbjct: 170329 aggcaattggttactgcatcgtcaggaactccattatttgaaattttccttgtcagagat 170270

                                         
Query: 101    gaagacgagacgtacacaatgaaggtg 127
              || || ||||| || ||||||||||||
Sbjct: 170269 gacgatgagacatatacaatgaaggtg 170243
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>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482C06
          Length = 182779

 Score =  155 bits (78), Expect = 2e-34
 Identities = 254/315 (80%)
 Strand = Plus / Minus

                                                                         
Query: 196   tccagctaaggcagagactgagagttcaccggacagcagtgttttatctgaagccattgc 255
             ||||||||||| ||||| ||| || |||  ||| || |||| | ||||||| | |||| |
Sbjct: 58422 tccagctaaggaagagaatgaaagctcattggaaagtagtgctatatctgagggcattac 58363

                                                                         
Query: 256   agaggaagcaaacacggataccaaattaaaaggaaatgaagatgtcgaggagaaagcgca 315
              || ||||| || || ||||| | |||||| ||| |||||||||| ||||| ||||  ||
Sbjct: 58362 cgatgaagcgaatacagatactacattaaagggagatgaagatgttgaggataaagaaca 58303

                                                                         
Query: 316   ggatactggaagaaccaaggaaagtggcgttgaagggttgaaaagtgttctgaannnnnn 375
              |||  ||| |   ||||||| ||| | ||||||||||||||||| ||||||||      
Sbjct: 58302 agatgttggtaacgccaaggatagtagtgttgaagggttgaaaagcgttctgaatttctt 58243

                                                                         
Query: 376   naagtcccggattcccgagttcaaagttcaagtcataaacgtggaggtgcccgaggaagc 435
              ||||| |||||||| || |||||||||||||| ||||| || || ||| | ||||||||
Sbjct: 58242 caagtctcggattcctgaattcaaagttcaagtaataaatgtagatgtgtctgaggaagc 58183

                                                                         
Query: 436   tgagttagttgcggattcgtcagaagagttagtgcaagatgatgtgaagagcacgtcaga 495
             ||| |||| | | |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 58182 tgaattagcttcagattcgtcagaagaattagtgcaagatgatgtgaagagcacgtcaga 58123

                            
Query: 496   gagttcgttggaaga 510
             ||  || ||||||||
Sbjct: 58122 gaactcattggaaga 58108



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                         
Query: 41    aggcaattgatcactgcatcttcagggagcccactatttgaaatattcctcgtcagagac 100
             ||||||||| | |||||||| ||||| |  ||| |||||||||| ||||| |||||||| 
Sbjct: 58692 aggcaattggttactgcatcgtcaggaactccattatttgaaattttccttgtcagagat 58633

                                        
Query: 101   gaagacgagacgtacacaatgaaggtg 127
             || || ||||| || ||||||||||||
Sbjct: 58632 gacgatgagacatatacaatgaaggtg 58606
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>dbj|AK070363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F20, full
            insert sequence
          Length = 2381

 Score =  155 bits (78), Expect = 2e-34
 Identities = 254/315 (80%)
 Strand = Plus / Plus

                                                                        
Query: 196  tccagctaaggcagagactgagagttcaccggacagcagtgttttatctgaagccattgc 255
            ||||||||||| ||||| ||| || |||  ||| || |||| | ||||||| | |||| |
Sbjct: 782  tccagctaaggaagagaatgaaagctcattggaaagtagtgctatatctgagggcattac 841

                                                                        
Query: 256  agaggaagcaaacacggataccaaattaaaaggaaatgaagatgtcgaggagaaagcgca 315
             || ||||| || || ||||| | |||||| ||| |||||||||| ||||| ||||  ||
Sbjct: 842  cgatgaagcgaatacagatactacattaaagggagatgaagatgttgaggataaagaaca 901

                                                                        
Query: 316  ggatactggaagaaccaaggaaagtggcgttgaagggttgaaaagtgttctgaannnnnn 375
             |||  ||| |   ||||||| ||| | ||||||||||||||||| ||||||||      
Sbjct: 902  agatgttggtaacgccaaggatagtagtgttgaagggttgaaaagcgttctgaatttctt 961

                                                                        
Query: 376  naagtcccggattcccgagttcaaagttcaagtcataaacgtggaggtgcccgaggaagc 435
             ||||| |||||||| || |||||||||||||| ||||| || || ||| | ||||||||
Sbjct: 962  caagtctcggattcctgaattcaaagttcaagtaataaatgtagatgtgtctgaggaagc 1021

                                                                        
Query: 436  tgagttagttgcggattcgtcagaagagttagtgcaagatgatgtgaagagcacgtcaga 495
            ||| |||| | | |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1022 tgaattagcttcagattcgtcagaagaattagtgcaagatgatgtgaagagcacgtcaga 1081

                           
Query: 496  gagttcgttggaaga 510
            ||  || ||||||||
Sbjct: 1082 gaactcattggaaga 1096



 Score =  103 bits (52), Expect = 7e-19
 Identities = 131/156 (83%), Gaps = 1/156 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggtgtcgggagatacgtcgccaagnagctacagcccaaggcaattgatcactgcatcttc 63
           ||||| |||||||| || || ||| |||| |||||||||||||||| | |||||||| ||
Sbjct: 594 ggtgttgggagatatgtggctaag-agcttcagcccaaggcaattggttactgcatcgtc 652

                                                                       
Query: 64  agggagcccactatttgaaatattcctcgtcagagacgaagacgagacgtacacaatgaa 123
           ||| |  ||| |||||||||| ||||| |||||||| || || ||||| || ||||||||
Sbjct: 653 aggaactccattatttgaaattttccttgtcagagatgacgatgagacatatacaatgaa 712

                                               
Query: 124 ggtggtacacttgcgaccgacaaaaggagcttcaag 159
           ||| |||||| ||||||| ||||||||  |||||||
Sbjct: 713 ggttgtacacatgcgaccaacaaaaggcacttcaag 748
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>gb|AY107854.1| Zea mays PCO142176 mRNA sequence
          Length = 1557

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 139/171 (81%), Gaps = 3/171 (1%)
 Strand = Plus / Plus

                                                                       
Query: 377 aagtcccggattcccgagttcaaagttcaagtcataaacgtggaggtgcccgaggaagct 436
           ||||| |||||||| || ||||||||||| || ||||| || || ||| | |||||| ||
Sbjct: 80  aagtctcggattcctgaattcaaagttcaggtgataaatgttgatgtggctgaggaaact 139

                                                                       
Query: 437 gagttagttgcggattcgtcagaagagttagtgcaagatgatgtgaagagcacgtcagag 496
           || |||| |||  ||||||| ||||| |||||||||||||||||||| || ||  |||| 
Sbjct: 140 gaattagctgcaaattcgtctgaagaattagtgcaagatgatgtgaaaagtactccagaa 199

                                                              
Query: 497 agttcgttggaagagcctgtcgccgaggaattc---caggaggaagatgtt 544
           || || ||||||||||| | | | |||||| ||   |||||||||||||||
Sbjct: 200 agctcattggaagagccagccactgaggaactcgagcaggaggaagatgtt 250
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>ref|XM_773667.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_82_36944_40936)
            partial mRNA
          Length = 3993

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 245  gaagccattgcagaggaagcaaac 268
            ||||||||||||||||||||||||
Sbjct: 3841 gaagccattgcagaggaagcaaac 3864
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>gb|AC134409.12| Mus musculus chromosome 5, clone RP24-355F10, complete sequence
          Length = 141528

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 521   gaggaattccaggaggaagatg 542
             ||||||||||||||||||||||
Sbjct: 93720 gaggaattccaggaggaagatg 93741
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>gb|AC145882.3| Pan troglodytes BAC clone RP43-7E19 from 7, complete sequence
          Length = 197080

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 197   ccagctaaggcagagactgaga 218
             ||||||||||||||||||||||
Sbjct: 26203 ccagctaaggcagagactgaga 26182
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>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome
          Length = 235645

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 161   gcgtcgtcgtccgtgccatcaa 182
             ||||||||||||||||||||||
Sbjct: 78510 gcgtcgtcgtccgtgccatcaa 78531
to top
>gb|DQ180391.1| Human herpesvirus 5 isolate D2 DNA polymerase gene, complete cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|DQ180379.1| Human herpesvirus 5 isolate D3 DNA polymerase gene, complete cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|DQ180362.1| Human herpesvirus 5 isolate D52 DNA polymerase gene, complete cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AY486473.1|AY486470S04 Human herpesvirus 5 strain Toledo genome, partial sequence
          Length = 29148

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 161   gcgtcgtcgtccgtgccatcaa 182
             ||||||||||||||||||||||
Sbjct: 26141 gcgtcgtcgtccgtgccatcaa 26162
to top
>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence
          Length = 233739

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 161    gcgtcgtcgtccgtgccatcaa 182
              ||||||||||||||||||||||
Sbjct: 143702 gcgtcgtcgtccgtgccatcaa 143681
to top
>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence
          Length = 229209

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 161    gcgtcgtcgtccgtgccatcaa 182
              ||||||||||||||||||||||
Sbjct: 149667 gcgtcgtcgtccgtgccatcaa 149646
to top
>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence
          Length = 234881

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 161    gcgtcgtcgtccgtgccatcaa 182
              ||||||||||||||||||||||
Sbjct: 114233 gcgtcgtcgtccgtgccatcaa 114254
to top
>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence
          Length = 226889

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 161    gcgtcgtcgtccgtgccatcaa 182
              ||||||||||||||||||||||
Sbjct: 145097 gcgtcgtcgtccgtgccatcaa 145076
to top
>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence
          Length = 229700

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 161    gcgtcgtcgtccgtgccatcaa 182
              ||||||||||||||||||||||
Sbjct: 149765 gcgtcgtcgtccgtgccatcaa 149744
to top
>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence
          Length = 229483

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 161    gcgtcgtcgtccgtgccatcaa 182
              ||||||||||||||||||||||
Sbjct: 110021 gcgtcgtcgtccgtgccatcaa 110042
to top
>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome
          Length = 231236

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 161   gcgtcgtcgtccgtgccatcaa 182
             ||||||||||||||||||||||
Sbjct: 76717 gcgtcgtcgtccgtgccatcaa 76738
to top
>gb|AY327256.1| Human herpesvirus 5 strain ATCC-VR977 DNA polymerase (UL54) gene,
            complete cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome
          Length = 229354

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 161   gcgtcgtcgtccgtgccatcaa 182
             ||||||||||||||||||||||
Sbjct: 77219 gcgtcgtcgtccgtgccatcaa 77240
to top
>gb|AF291828.1| Human herpesvirus 5 isolate E795 DNA polymerase gene, complete cds
          Length = 3723

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3407 gcgtcgtcgtccgtgccatcaa 3386
to top
>gb|AF133628.1|AF133628 Human herpesvirus 5 isolate AW-J DNA polymerase (UL54) gene, complete
            cds
          Length = 3732

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3416 gcgtcgtcgtccgtgccatcaa 3395
to top
>gb|AF133627.1|AF133627 Human herpesvirus 5 isolate AW-I DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133626.1|AF133626 Human herpesvirus 5 isolate AW-H DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133625.1|AF133625 Human herpesvirus 5 isolate AW-G DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133624.1|AF133624 Human herpesvirus 5 isolate AW-F DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133623.1|AF133623 Human herpesvirus 5 isolate AW-E DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133622.1|AF133622 Human herpesvirus 5 isolate AW-D DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133621.1|AF133621 Human herpesvirus 5 isolate AW-C DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133620.1|AF133620 Human herpesvirus 5 isolate AW-B DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133619.1|AF133619 Human herpesvirus 5 isolate CC-10 DNA polymerase (UL54) gene,
            complete cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133618.1|AF133618 Human herpesvirus 5 isolate CC-9 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133617.1|AF133617 Human herpesvirus 5 isolate CC-8 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133616.1|AF133616 Human herpesvirus 5 isolate CC-7 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133615.1|AF133615 Human herpesvirus 5 isolate CC-6 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133614.1|AF133614 Human herpesvirus 5 isolate CC-5 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133613.1|AF133613 Human herpesvirus 5 isolate CC-4 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133612.1|AF133612 Human herpesvirus 5 isolate NL-MG DNA polymerase (UL54) gene,
            complete cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133611.1|AF133611 Human herpesvirus 5 isolate NLPET8 DNA polymerase (UL54) gene,
            complete cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133610.1|AF133610 Human herpesvirus 5 isolate NLMCG DNA polymerase (UL54) gene,
            complete cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133609.1|AF133609 Human herpesvirus 5 isolate NL9 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133608.1|AF133608 Human herpesvirus 5 isolate NL8 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133607.1|AF133607 Human herpesvirus 5 isolate NL6A DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133606.1|AF133606 Human herpesvirus 5 isolate NL4 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133605.1|AF133605 Human herpesvirus 5 isolate NL2 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133604.1|AF133604 Human herpesvirus 5 isolate NL14 DNA polymerase (UL54) gene, complete
            cds
          Length = 3723

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133603.1|AF133603 Human herpesvirus 5 isolate NL13 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133602.1|AF133602 Human herpesvirus 5 isolate NL1 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133601.1|AF133601 Human herpesvirus 5 isolate E756 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133599.1|AF133599 Human herpesvirus 5 isolate E761 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133598.1|AF133598 Human herpesvirus 5 isolate E760 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133597.1|AF133597 Human herpesvirus 5 isolate E759 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133596.1|AF133596 Human herpesvirus 5 isolate E545 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133595.1|AF133595 Human herpesvirus 5 isolate E540 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133593.1|AF133593 Human herpesvirus 5 isolate E428 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133592.1|AF133592 Human herpesvirus 5 isolate C336 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133591.1|AF133591 Human herpesvirus 5 isolate C005 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133590.1|AF133590 Human herpesvirus 5 isolate C128 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|AF133589.1|AF133589 Human herpesvirus 5 isolate C076 DNA polymerase (UL54) gene, complete
            cds
          Length = 3729

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 3413 gcgtcgtcgtccgtgccatcaa 3392
to top
>gb|M17209.1|HS5VF Human cytomegalovirus F fragment DNA encoding DNA polymerase and
             glycoprotein B, complete cds
          Length = 20349

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 161   gcgtcgtcgtccgtgccatcaa 182
             ||||||||||||||||||||||
Sbjct: 12699 gcgtcgtcgtccgtgccatcaa 12720
to top
>gb|M14709.1|HS5POL Human cytomegalovirus (HCMV) DNA polymerase (pol) gene (put.),
            complete cds and glycop rotein B gene, 3' end
          Length = 5280

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 4072 gcgtcgtcgtccgtgccatcaa 4051
to top
>dbj|D14981.1|HS5TS256 Human cytomegalovirus gene for DNA polymerase, temperature-sensitive
            mutation
          Length = 5090

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 2392 gcgtcgtcgtccgtgccatcaa 2413
to top
>dbj|D14980.1|HS5TOWNE Human cytomegalovirus gene for DNA polymerase, wild type
          Length = 5090

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 161  gcgtcgtcgtccgtgccatcaa 182
            ||||||||||||||||||||||
Sbjct: 2392 gcgtcgtcgtccgtgccatcaa 2413
to top
>gb|AC131989.8| Mus musculus chromosome 14, clone RP24-186N15, complete sequence
          Length = 180932

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 112   gtacacaatgaaggtggtacacttg 136
             |||||||| ||||||||||||||||
Sbjct: 99767 gtacacaaagaaggtggtacacttg 99743
to top
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 282     taaaaggaaatgaagatgtc 301
               ||||||||||||||||||||
Sbjct: 2648172 taaaaggaaatgaagatgtc 2648153
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>gb|AC148330.2| Mus musculus BAC clone RP24-320F10 from chromosome 8, complete sequence
          Length = 162341

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   ggataccaaattaaaaggaa 290
             ||||||||||||||||||||
Sbjct: 91320 ggataccaaattaaaaggaa 91339
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 282     taaaaggaaatgaagatgtc 301
               ||||||||||||||||||||
Sbjct: 2609529 taaaaggaaatgaagatgtc 2609510
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 282     taaaaggaaatgaagatgtc 301
               ||||||||||||||||||||
Sbjct: 2609865 taaaaggaaatgaagatgtc 2609846
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>gb|AC140455.2| Mus musculus BAC clone RP23-24B2 from chromosome 18, complete sequence
          Length = 242533

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    catcttcagggagcccacta 76
             ||||||||||||||||||||
Sbjct: 45252 catcttcagggagcccacta 45233
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>gb|AC117260.3| Mus musculus BAC clone RP24-498G10 from chromosome 18, complete sequence
          Length = 211919

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     catcttcagggagcccacta 76
              ||||||||||||||||||||
Sbjct: 118695 catcttcagggagcccacta 118676
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 282     taaaaggaaatgaagatgtc 301
               ||||||||||||||||||||
Sbjct: 2663128 taaaaggaaatgaagatgtc 2663109
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>ref|NM_062162.3| Caenorhabditis elegans Y49F6B.2 (Y49F6B.2) mRNA, complete cds
          Length = 816

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 510 agcctgtcgccgaggaattc 529
           ||||||||||||||||||||
Sbjct: 119 agcctgtcgccgaggaattc 138
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>gb|AC006790.2| Caenorhabditis elegans cosmid Y49F6B, complete sequence
          Length = 52139

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 510   agcctgtcgccgaggaattc 529
             ||||||||||||||||||||
Sbjct: 37375 agcctgtcgccgaggaattc 37394
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 505     ggaagagcctgtcgccgagg 524
               ||||||||||||||||||||
Sbjct: 6931044 ggaagagcctgtcgccgagg 6931063
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>gb|U23066.1|PAU23066 Persea americana flavanone 3-hydroxylase mRNA, complete cds
          Length = 1316

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcgtcagagacgaagacgag 109
           ||||||||||||||||||||
Sbjct: 84  tcgtcagagacgaagacgag 103
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 282     taaaaggaaatgaagatgtc 301
               ||||||||||||||||||||
Sbjct: 2609405 taaaaggaaatgaagatgtc 2609386


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,650,953
Number of Sequences: 3902068
Number of extensions: 4650953
Number of successful extensions: 84777
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84487
Number of HSP's gapped (non-prelim): 285
length of query: 610
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 587
effective length of database: 17,143,297,704
effective search space: 10063115752248
effective search space used: 10063115752248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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