| Clone Name | bags24b04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_578879.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC367537), mRNA Length = 2019 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcagatg 285 |||||||||| |||||||||||||||| Sbjct: 1823 ctcctccagcagaggtgaagtcagatg 1849
>ref|XM_578846.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC503311), mRNA Length = 717 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcagatg 285 |||||||||| |||||||||||||||| Sbjct: 521 ctcctccagcagaggtgaagtcagatg 547
>gb|AF296094.1| Porcine teschovirus 9 strain Vir 2899/84 polyprotein gene, complete cds Length = 7006 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 gtggaagatgaaaagccagctg 129 |||||||||||||||||||||| Sbjct: 6842 gtggaagatgaaaagccagctg 6821
>gb|AC119615.7| Rattus norvegicus 10 NOVECTOR CH230-502G21 (Children's Hospital Oakland Research Institute) complete sequence Length = 156223 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 gagaacaaggaaaacgagaagccag 51 ||||||||||||||||| ||||||| Sbjct: 36594 gagaacaaggaaaacgaaaagccag 36618
>ref|NM_183329.3| Rattus norvegicus steroid receptor RNA activator 1 (Sra1), mRNA Length = 945 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 atcttcagaggagaagaaagaagag 230 ||||||||||||||| ||||||||| Sbjct: 638 atcttcagaggagaacaaagaagag 662
>gb|AY542868.1| Rattus norvegicus steroid receptor RNA activator mRNA, complete cds Length = 756 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 atcttcagaggagaagaaagaagag 230 ||||||||||||||| ||||||||| Sbjct: 635 atcttcagaggagaacaaagaagag 659
>gb|AC165154.2| Mus musculus BAC clone RP23-302C3 from chromosome 14, complete sequence Length = 225721 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 484 aaacttggtctctgtgtgcttagga 508 |||| |||||||||||||||||||| Sbjct: 98829 aaacatggtctctgtgtgcttagga 98805
>gb|AC113030.5| Mus musculus chromosome 6, clone RP23-211L5, complete sequence Length = 187655 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 ttcagaggagaagaaagaagaggca 233 |||||||||| |||||||||||||| Sbjct: 97557 ttcagaggaggagaaagaagaggca 97533
>emb|Z98949.1|HS125H2 Human DNA sequence from clone CTA-125H2 on chromosome 22q11-12, complete sequence Length = 173513 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 catcttcagaggagaagaaag 225 ||||||||||||||||||||| Sbjct: 162198 catcttcagaggagaagaaag 162178
>emb|AL663096.16| Mouse DNA sequence from clone RP23-249K18 on chromosome 11 Contains two novel genes, the gene for a novel protein similar to human GAS2-related protein, the Mmp28 gene for matrix metalloproteinase 28 (epilysin), the 5' end of the Taf15 gene for TAF15 RNA polymerase II TATA box binding protein (TBP)-associated factor and a CpG island, complete sequence Length = 86442 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 gagaacaaggaaaacgagaagccag 51 ||||||||||||||||| ||||||| Sbjct: 68945 gagaacaaggaaaacgaaaagccag 68921
>emb|AJ310932.1|HSA310932 Homo sapiens MYO18B gene for myosin heavy chain, exons 1-44 Length = 288888 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 catcttcagaggagaagaaag 225 ||||||||||||||||||||| Sbjct: 254779 catcttcagaggagaagaaag 254759
>gb|AC124036.5| Mus Musculus Strain C57BL6/J chromosome 11 BAC Clone RP24-100D7, Complete Sequence, complete sequence Length = 228907 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 gagaacaaggaaaacgagaagccag 51 ||||||||||||||||| ||||||| Sbjct: 219318 gagaacaaggaaaacgaaaagccag 219294
>ref|NM_027427.1| Mus musculus TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf15), mRNA Length = 2050 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 gagaacaaggaaaacgagaagccag 51 ||||||||||||||||| ||||||| Sbjct: 54 gagaacaaggaaaacgaaaagccag 30
>gb|AF326737.2| Mus musculus sclerostin (Sost) gene, complete cds; and Meox1 gene, partial sequence Length = 81806 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagaggc 232 ||||||||||||||||||||| Sbjct: 42292 agaggagaagaaagaagaggc 42312
>dbj|AK166550.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched library, clone:I0C0016F01 product:TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, full insert sequence Length = 1927 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 gagaacaaggaaaacgagaagccag 51 ||||||||||||||||| ||||||| Sbjct: 46 gagaacaaggaaaacgaaaagccag 22
>dbj|AK169745.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430018A11 product:TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, full insert sequence Length = 1363 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 gagaacaaggaaaacgagaagccag 51 ||||||||||||||||| ||||||| Sbjct: 54 gagaacaaggaaaacgaaaagccag 30
>dbj|AK078205.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430508C05 product:TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68 kDa, full insert sequence Length = 871 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 gagaacaaggaaaacgagaagccag 51 ||||||||||||||||| ||||||| Sbjct: 65 gagaacaaggaaaacgaaaagccag 41
>gb|AC008686.8| Homo sapiens chromosome 19 clone CTB-5E10, complete sequence Length = 150192 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 18 cttgtatcagagaacaaggaaaacg 42 ||||||||||| ||||||||||||| Sbjct: 62615 cttgtatcagaaaacaaggaaaacg 62639
>dbj|AK051568.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130057K06 product:TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68 kDa, full insert sequence Length = 2050 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 gagaacaaggaaaacgagaagccag 51 ||||||||||||||||| ||||||| Sbjct: 54 gagaacaaggaaaacgaaaagccag 30
>gb|AC068807.21| Mus musculus 11 BAC RP23-346P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 208135 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagaggc 232 ||||||||||||||||||||| Sbjct: 89356 agaggagaagaaagaagaggc 89376
>dbj|AK011843.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610111C21 product:TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68 kDa, full insert sequence Length = 880 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 gagaacaaggaaaacgagaagccag 51 ||||||||||||||||| ||||||| Sbjct: 75 gagaacaaggaaaacgaaaagccag 51
>gb|AY026354.1| Rattus norvegicus steroid receptor co-activator protein SRAP mRNA, complete cds Length = 893 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 atcttcagaggagaagaaagaagag 230 ||||||||||||||| ||||||||| Sbjct: 586 atcttcagaggagaacaaagaagag 610
>ref|XM_578953.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC503414), mRNA Length = 660 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 464 ctcctccagcagaggtgaagtcaga 488
>ref|XM_346105.2| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367363), mRNA Length = 567 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 371 ctcctccagcagaggtgaagtcaga 395
>ref|XM_229258.2| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 2 (SPIN-2) (LOC316825), mRNA Length = 717 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
>ref|XM_229431.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC301934), mRNA Length = 1023 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 827 ctcctccagcagaggtgaagtcaga 851
>ref|XM_229439.2| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC301944), mRNA Length = 717 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
>ref|XM_578935.1| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 3 (SPIN-3) (Protein DXF34) (LOC503397), mRNA Length = 627 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 518 ctcctccagcagaggtgaagtcaga 542
>ref|XM_578908.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC367582), mRNA Length = 705 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
>ref|XM_578907.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC503368), mRNA Length = 705 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
>ref|XM_229279.2| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC301803), mRNA Length = 717 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
>ref|XM_225832.3| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 2 (SPIN-2) (LOC291510), mRNA Length = 2145 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
>ref|XM_225836.2| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC307328), mRNA Length = 729 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 533 ctcctccagcagaggtgaagtcaga 557
>ref|XM_225786.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC291516), mRNA Length = 705 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
>ref|XM_578896.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367566), mRNA Length = 1455 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 695 ctcctccagcagaggtgaagtcaga 719
>ref|XM_229292.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC301816), mRNA Length = 915 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 719 ctcctccagcagaggtgaagtcaga 743
>ref|XM_346152.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367471), mRNA Length = 705 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
>ref|XM_346204.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367543), mRNA Length = 675 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 479 ctcctccagcagaggtgaagtcaga 503
>ref|XM_578880.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC367539), mRNA Length = 627 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 518 ctcctccagcagaggtgaagtcaga 542
>ref|XM_578877.1| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 2 (SPIN-2) (LOC367536), mRNA Length = 705 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
>ref|XM_229303.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC301824), mRNA Length = 1176 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
>ref|XM_346151.2| PREDICTED: Rattus norvegicus similar to Spindlin-like protein 2 (SPIN-2) (LOC367470), mRNA Length = 1200 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 416 ctcctccagcagaggtgaagtcaga 440
>ref|XM_578863.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC367462), mRNA Length = 717 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
>ref|XM_229422.3| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC301926), mRNA Length = 1836 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 1640 ctcctccagcagaggtgaagtcaga 1664 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 689 ctcctccagcagaggtgaagtcaga 713
>ref|XM_578854.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC503320), mRNA Length = 459 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 263 ctcctccagcagaggtgaagtcaga 287
>ref|XM_229476.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC301966), mRNA Length = 735 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 539 ctcctccagcagaggtgaagtcaga 563
>ref|XM_346138.2| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367436), mRNA Length = 462 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 266 ctcctccagcagaggtgaagtcaga 290
>ref|XM_578829.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC367387), mRNA Length = 708 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 512 ctcctccagcagaggtgaagtcaga 536
>ref|XM_578822.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC503287), mRNA Length = 732 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 536 ctcctccagcagaggtgaagtcaga 560
>ref|XM_229360.2| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC301878), mRNA Length = 717 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
>ref|XM_229255.3| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC301786), mRNA Length = 1836 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 593 ctcctccagcagaggtgaagtcaga 617
>ref|XM_229717.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC302140), mRNA Length = 1122 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 926 ctcctccagcagaggtgaagtcaga 950
>ref|XM_346104.2| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367357), mRNA Length = 813 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 677 ctcctccagcagaggtgaagtcaga 701
>ref|XM_578816.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC367356), mRNA Length = 705 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
>ref|XM_229433.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC301935), mRNA Length = 492 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 296 ctcctccagcagaggtgaagtcaga 320
>ref|XM_578813.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367352), mRNA Length = 744 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 548 ctcctccagcagaggtgaagtcaga 572
>ref|XM_577508.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC502074), mRNA Length = 1641 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 1445 ctcctccagcagaggtgaagtcaga 1469
>ref|XM_577506.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC364549), mRNA Length = 717 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 521 ctcctccagcagaggtgaagtcaga 545
>ref|XM_222167.1| PREDICTED: Rattus norvegicus similar to spermiogenesis specific transcript on the Y 2 (LOC288646), mRNA Length = 705 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 ctcctccagcggaggtgaagtcaga 283 |||||||||| |||||||||||||| Sbjct: 509 ctcctccagcagaggtgaagtcaga 533
>gb|BC091105.1| Rattus norvegicus cDNA clone MGC:108511 IMAGE:7381969, complete cds Length = 1747 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 atcttcagaggagaagaaagaagag 230 ||||||||||||||| ||||||||| Sbjct: 1422 atcttcagaggagaacaaagaagag 1446
>gb|AF093117.1|AF093117 Homo sapiens chromosome 7qtelo BAC E3, complete sequence Length = 147216 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 gagaagaaagaagaggcagat 236 ||||||||||||||||||||| Sbjct: 127498 gagaagaaagaagaggcagat 127518
>emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chromosome 11, complete sequence Length = 187006 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 agaggagaagaaagaagaggc 232 ||||||||||||||||||||| Sbjct: 168442 agaggagaagaaagaagaggc 168422
>emb|AL807402.1|CNS08CA6 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 437H9 of library RPCI-23 from chromosome 11 of strain C57Bl/6 of Mus musculus (mouse) Length = 205701 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 gagaacaaggaaaacgagaagccag 51 ||||||||||||||||| ||||||| Sbjct: 115029 gagaacaaggaaaacgaaaagccag 115005
>ref|NM_102073.1| Arabidopsis thaliana unknown protein AT1G22230 mRNA, complete cds Length = 945 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tcagaggagaagaaagaaga 229 |||||||||||||||||||| Sbjct: 688 tcagaggagaagaaagaaga 707
>ref|NM_105873.2| Arabidopsis thaliana PATL1 (PATELLIN 1); transporter AT1G72150 (PATL1) mRNA, complete cds Length = 2148 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 517 cagaggagaagaaagaagag 536
>gb|AC100500.10| Mus musculus chromosome 3, clone RP23-143I10, complete sequence Length = 179369 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 137722 agaggagaagaaagaagagg 137703
>gb|AY773817.1| Arabidopsis thaliana clone pENTR221-At1g22230 hypothetical protein (At1g22230) gene, complete cds Length = 945 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tcagaggagaagaaagaaga 229 |||||||||||||||||||| Sbjct: 688 tcagaggagaagaaagaaga 707
>gb|AC104202.13| Mus musculus chromosome 5, clone RP24-558F5, complete sequence Length = 189841 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 103239 cagaggagaagaaagaagag 103220
>ref|NM_212766.1| Danio rerio RAN binding protein 1 (ranbp1), mRNA Length = 862 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ttcagaggagaagaaagaagaggc 232 ||||||||| |||||||||||||| Sbjct: 665 ttcagaggacaagaaagaagaggc 688
>gb|AY735521.1| Arabidopsis thaliana hypothetical protein AT1G22230 mRNA, complete cds Length = 1289 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tcagaggagaagaaagaaga 229 |||||||||||||||||||| Sbjct: 920 tcagaggagaagaaagaaga 939
>gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, complete sequence Length = 166568 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 115476 agaggagaagaaagaagagg 115495
>gb|AC131725.2| Mus musculus BAC clone RP23-129H16 from chromosome 5, complete sequence Length = 203437 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 agaggagaagaaagaagaggcaga 235 ||||||| |||||||||||||||| Sbjct: 163970 agaggaggagaaagaagaggcaga 163947
>ref|NM_013665.1| Mus musculus short stature homeobox 2 (Shox2), mRNA Length = 1603 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 53 agaggagaagaaagaagagg 34
>ref|NM_031405.1| Mus musculus arsenate resistance protein 2 (Ars2), mRNA Length = 2628 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gaggagaagaaagaagaggc 232 |||||||||||||||||||| Sbjct: 1003 gaggagaagaaagaagaggc 1022
>gb|AC154398.6| Mus musculus chromosome 1, clone RP24-372I12, complete sequence Length = 178664 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 74263 agaggagaagaaagaagagg 74282 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 74236 agaggagaagaaagaagagg 74255
>gb|BC067558.1| Danio rerio cDNA clone MGC:85649 IMAGE:6805750, complete cds Length = 2429 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ttcagaggagaagaaagaagaggc 232 ||||||||| |||||||||||||| Sbjct: 630 ttcagaggacaagaaagaagaggc 653
>gb|BC066831.1| Mus musculus arsenate resistance protein 2, mRNA (cDNA clone MGC:76605 IMAGE:30471339), complete cds Length = 2990 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gaggagaagaaagaagaggc 232 |||||||||||||||||||| Sbjct: 1231 gaggagaagaaagaagaggc 1250
>gb|AC124374.5| Mus musculus BAC clone RP24-567K8 from chromosome 5, complete sequence Length = 181395 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagaggcaga 235 ||||||| |||||||||||||||| Sbjct: 23275 agaggaggagaaagaagaggcaga 23298
>gb|AC124436.5| Mus musculus BAC clone RP24-252O24 from chromosome 10, complete sequence Length = 174497 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 112933 agaggagaagaaagaagagg 112952
>ref|XM_813279.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506859.240) partial mRNA Length = 1575 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccagcggcagaggcaacaaa 307 |||||||||||||||||||| Sbjct: 1478 ccagcggcagaggcaacaaa 1459
>gb|AC123836.4| Mus musculus BAC clone RP23-367G3 from chromosome 15, complete sequence Length = 179575 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 86424 agaggagaagaaagaagagg 86443
>emb|BX936293.11| Platypus DNA sequence from clone XX-516O5, complete sequence Length = 178175 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 19388 cagaggagaagaaagaagag 19369
>emb|CR708658.2|CNS0G9R2 Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>emb|CR719420.2|CNS0GI1U Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>emb|CR719142.2|CNS0GHU4 Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 359 cagaggagaagaaagaagag 378
>emb|CR716150.2|CNS0GFJ6 Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>emb|CR715867.2|CNS0GFBB Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 359 cagaggagaagaaagaagag 378
>emb|CR715433.2|CNS0GEZ9 Tetraodon nigroviridis full-length cDNA Length = 414 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 236 cagaggagaagaaagaagag 255
>emb|CR714475.2|CNS0GE8N Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 359 cagaggagaagaaagaagag 378
>emb|CR714006.2|CNS0GDVM Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>emb|CR710770.2|CNS0GBDQ Tetraodon nigroviridis full-length cDNA Length = 549 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 371 cagaggagaagaaagaagag 390
>emb|CR710514.2|CNS0GB6M Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>emb|CR710325.2|CNS0GB1D Tetraodon nigroviridis full-length cDNA Length = 539 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 361 cagaggagaagaaagaagag 380
>emb|CR705895.2|CNS0G7MB Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 359 cagaggagaagaaagaagag 378
>emb|CR706408.2|CNS0G80K Tetraodon nigroviridis full-length cDNA Length = 537 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 359 cagaggagaagaaagaagag 378
>emb|CR704833.2|CNS0G6ST Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>emb|CR701447.2|CNS0G46R Tetraodon nigroviridis full-length cDNA Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 358 cagaggagaagaaagaagag 377
>gb|AC160958.2| Mus musculus BAC clone RP24-224I13 from chromosome 13, complete sequence Length = 178784 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gagaagaaagaagaggcaga 235 |||||||||||||||||||| Sbjct: 175297 gagaagaaagaagaggcaga 175316
>emb|CR388061.11| Zebrafish DNA sequence from clone DKEY-69P22 in linkage group 5, complete sequence Length = 122069 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 209 ttcagaggagaagaaagaagaggc 232 ||||||||| |||||||||||||| Sbjct: 105584 ttcagaggacaagaaagaagaggc 105561
>emb|Z93021.2|HS516C23 Human DNA sequence from clone RP3-516C23 on chromosome 6q12 Contains the 5' end of the KHDRBS2 gene for KH domain containing RNA binding signal transduction associated protein 2, complete sequence Length = 116685 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 agaagaaagaagaggcagat 236 |||||||||||||||||||| Sbjct: 23177 agaagaaagaagaggcagat 23158
>emb|AL080315.18|HSDJ6P5 Human DNA sequence from clone RP1-6P5 on chromosome 6 Contains a eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) (EEF1D) pseudogene and a ribosomal protein L21 (RPL21) pseudogene, complete sequence Length = 158980 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 agctgaatatgaagtaactg 144 |||||||||||||||||||| Sbjct: 88798 agctgaatatgaagtaactg 88817
>gb|AC144548.8| Homo sapiens 12 BAC RP11-478C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174974 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 gaggagaagaaagaagaggcagat 236 |||| ||||||||||||||||||| Sbjct: 3792 gaggggaagaaagaagaggcagat 3815
>emb|Z47378.1|OCNFPROTM O.cuniculus mRNA for neurofilament protein M Length = 2428 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagaggcaga 235 |||||||||| ||||||||||||| Sbjct: 818 agaggagaaggaagaagaggcaga 841
>ref|XM_775345.1| PREDICTED: Strongylocentrotus purpuratus similar to formin 2 (LOC574937), mRNA Length = 3582 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 857 agaggagaagaaagaagagg 876
>gb|AY113865.1| Arabidopsis thaliana putative cytosolic factor protein (At1g72150) mRNA, complete cds Length = 1753 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 419 cagaggagaagaaagaagag 438
>gb|AY045913.1| Arabidopsis thaliana putative cytosolic factor (At1g72150) mRNA, complete cds Length = 2024 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 466 cagaggagaagaaagaagag 485
>gb|AC161570.6| Mus musculus chromosome 5, clone RP23-36O9, complete sequence Length = 228402 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 agaggagaagaaagaagaggcaga 235 ||||||| |||||||||||||||| Sbjct: 108400 agaggaggagaaagaagaggcaga 108377
>gb|AC156939.5| Mus musculus BAC clone RP23-136O24 from chromosome 12, complete sequence Length = 218561 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 137312 agaggagaagaaagaagagg 137293
>ref|NM_001002101.1| Danio rerio zgc:86895 (zgc:86895), mRNA Length = 930 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 514 agaggagaagaaagaagagg 533
>gb|AC034239.5| Homo sapiens chromosome 5 clone CTD-2325A5, complete sequence Length = 93381 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 aggagaagaaagaagaggca 233 |||||||||||||||||||| Sbjct: 45833 aggagaagaaagaagaggca 45814
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 atcttcagaggagaagaaagaaga 229 |||||||||||| ||||||||||| Sbjct: 4481319 atcttcagaggaaaagaaagaaga 4481342
>gb|AC010010.6| Drosophila melanogaster 3L BAC RP98-13F6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167977 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gaagccagctgaatccgaag 63 |||||||||||||||||||| Sbjct: 5123 gaagccagctgaatccgaag 5104
>gb|AC010688.6| Drosophila melanogaster 3L BAC RP98-11G5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 201313 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 ggcgagaaaagtgaaaacgg 172 |||||||||||||||||||| Sbjct: 49716 ggcgagaaaagtgaaaacgg 49697
>ref|NM_206224.1| Drosophila melanogaster Enhancer of bithorax CG32346-RC, transcript variant C (E(bx)), mRNA Length = 7830 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gaagccagctgaatccgaag 63 |||||||||||||||||||| Sbjct: 3752 gaagccagctgaatccgaag 3771
>gb|AC084365.16| Homo sapiens 12 BAC RP11-632B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188629 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tcagaggagaagaaagaaga 229 |||||||||||||||||||| Sbjct: 166798 tcagaggagaagaaagaaga 166817
>ref|NM_167819.2| Drosophila melanogaster Enhancer of bithorax CG32346-RA, transcript variant A (E(bx)), mRNA Length = 8834 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gaagccagctgaatccgaag 63 |||||||||||||||||||| Sbjct: 3752 gaagccagctgaatccgaag 3771
>ref|NM_167817.2| Drosophila melanogaster Enhancer of bithorax CG32346-RB, transcript variant B (E(bx)), mRNA Length = 8774 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gaagccagctgaatccgaag 63 |||||||||||||||||||| Sbjct: 3752 gaagccagctgaatccgaag 3771
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 1374521 agaggagaagaaagaagagg 1374502 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 1374162 agaggagaagaaagaagagg 1374143
>dbj|AK144300.1| Mus musculus 13 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:G630012F19 product:Arsenite-resistance protein 2, full insert sequence Length = 2990 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gaggagaagaaagaagaggc 232 |||||||||||||||||||| Sbjct: 1263 gaggagaagaaagaagaggc 1282
>ref|XM_694421.1| PREDICTED: Danio rerio similar to Ran binding protein 1 (LOC573843), mRNA Length = 2514 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ttcagaggagaagaaagaagaggc 232 ||||||||| |||||||||||||| Sbjct: 730 ttcagaggacaagaaagaagaggc 753
>gb|AY060558.1| Arabidopsis thaliana At1g72150/T9N14_1 mRNA sequence Length = 2049 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 516 cagaggagaagaaagaagag 535
>gb|AF417921.1|AF417921 Drosophila melanogaster nucleosome remodeling factor large subunit NURF301 (Nurf301) mRNA, complete cds Length = 8808 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gaagccagctgaatccgaag 63 |||||||||||||||||||| Sbjct: 3726 gaagccagctgaatccgaag 3745
>gb|AY051776.1| Drosophila melanogaster LD30146 full length cDNA Length = 4072 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gaagccagctgaatccgaag 63 |||||||||||||||||||| Sbjct: 43 gaagccagctgaatccgaag 62
>gb|AC093121.1| Drosophila melanogaster 3L BAC RP98-11J11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168250 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gaagccagctgaatccgaag 63 |||||||||||||||||||| Sbjct: 66648 gaagccagctgaatccgaag 66667
>gb|AF364085.1|AF364085 Danio rerio Ran binding protein 1 mRNA, complete cds Length = 862 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 ttcagaggagaagaaagaagaggc 232 ||||||||| |||||||||||||| Sbjct: 665 ttcagaggacaagaaagaagaggc 688
>gb|AC158596.7| Mus musculus 10 BAC RP23-188F7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207673 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ccagcatcttcagaggagaa 220 |||||||||||||||||||| Sbjct: 10497 ccagcatcttcagaggagaa 10478
>gb|AF312033.1|AF312033 Mus musculus acetylcholinesterase (Ache) and D5Ertd655e genes, complete cds; ASR2 (Asr2) gene, complete cds, alternatively spliced; TRIP6 (Trip6), CIP1 (Cip1), EPHB4 (Ephb4), ZAN (Zan), EPO (Epo), RPP20 (Rpp20), PERQ1 (Perq1), GNB2 (Gnb2), and BAF53B (Baf53b) genes, complete cds; and TFR2 (Tfr2) gene, partial cds Length = 296820 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gaggagaagaaagaagaggc 232 |||||||||||||||||||| Sbjct: 19059 gaggagaagaaagaagaggc 19040
>gb|AC152504.2| Pan troglodytes BAC clone RP43-147M24 from chromosome 7, complete sequence Length = 178619 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 agaagaaagaagaggcagat 236 |||||||||||||||||||| Sbjct: 58745 agaagaaagaagaggcagat 58764
>gb|AC067754.6|AC067754 Arabidopsis thaliana chromosome 1 BAC T9N14 genomic sequence, complete sequence Length = 98874 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagaggagaagaaagaagag 230 |||||||||||||||||||| Sbjct: 12921 cagaggagaagaaagaagag 12940
>ref|XM_229238.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC301772), mRNA Length = 717 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 tcctccagcggaggtgaagtcaga 283 ||||||||| |||||||||||||| Sbjct: 522 tcctccagcagaggtgaagtcaga 545
>ref|XM_222132.3| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC288640), mRNA Length = 1143 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 tcctccagcggaggtgaagtcaga 283 ||||||||| |||||||||||||| Sbjct: 456 tcctccagcagaggtgaagtcaga 479
>ref|XM_578815.1| PREDICTED: Rattus norvegicus similar to Y-linked testis-specific protein (LOC367355), mRNA Length = 717 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 tcctccagcggaggtgaagtcaga 283 ||||||||| |||||||||||||| Sbjct: 522 tcctccagcagaggtgaagtcaga 545
>gb|AC073942.2|F16L1 Sequence of BAC F16L1 from Arabidopsis thaliana chromosome 1, complete sequence Length = 36030 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 tcagaggagaagaaagaaga 229 |||||||||||||||||||| Sbjct: 9504 tcagaggagaagaaagaaga 9485
>dbj|BS000162.1| Pan troglodytes chromosome 22 clone:PTB-060F12, map 22, complete sequences Length = 156288 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tatcagagaacaaggaaaac 41 |||||||||||||||||||| Sbjct: 143606 tatcagagaacaaggaaaac 143625
>gb|AY929853.1| Danio rerio troponin 1 mRNA, complete cds Length = 754 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 513 agaggagaagaaagaagagg 532
>gb|AC005780.1|AC005780 Homo sapiens chromosome 19, cosmid F23049, complete sequence Length = 42393 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 ggaggtgaagtcagatgctc 288 |||||||||||||||||||| Sbjct: 35012 ggaggtgaagtcagatgctc 34993
>gb|AC002462.1|AC002462 Human BAC clone CTA-210I4, complete sequence Length = 100258 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tcagaggagaagaaagaaga 229 |||||||||||||||||||| Sbjct: 69848 tcagaggagaagaaagaaga 69867
>gb|BC071518.1| Danio rerio zgc:86895, mRNA (cDNA clone MGC:86895 IMAGE:6904872), complete cds Length = 930 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 514 agaggagaagaaagaagagg 533
>emb|AL954228.1|CH179K04 Pan troglodytes chromosome 22 BAC CH251-179K04, complete sequence Length = 182532 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tatcagagaacaaggaaaac 41 |||||||||||||||||||| Sbjct: 161520 tatcagagaacaaggaaaac 161539
>gb|AE003526.4| Drosophila melanogaster chromosome 3L, section 59 of 83 of the complete sequence Length = 281100 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 ggcgagaaaagtgaaaacgg 172 |||||||||||||||||||| Sbjct: 53589 ggcgagaaaagtgaaaacgg 53570
>gb|AE003467.4| Drosophila melanogaster chromosome 3L, section 1 of 83 of the complete sequence Length = 303512 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gaagccagctgaatccgaag 63 |||||||||||||||||||| Sbjct: 226171 gaagccagctgaatccgaag 226152
>gb|AC123709.9| Mus musculus chromosome 13, clone RP23-375O18, complete sequence Length = 99670 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gagaagaaagaagaggcaga 235 |||||||||||||||||||| Sbjct: 97273 gagaagaaagaagaggcaga 97254
>gb|U66918.1|MMU66918 Mus musculus OG-12a homeodomain protein (OG-12) mRNA, complete cds Length = 1603 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 53 agaggagaagaaagaagagg 34
>gb|AC163645.5| Mus musculus BAC clone RP23-206F16 from chromosome 10, complete sequence Length = 212773 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 8601 agaggagaagaaagaagagg 8620
>gb|AC144921.12| Mus musculus chromosome 1, clone RP24-214P19, complete sequence Length = 188960 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 164176 agaggagaagaaagaagagg 164195 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 164149 agaggagaagaaagaagagg 164168
>gb|AC150682.2| Mus musculus BAC clone RP24-210N1 from 5, complete sequence Length = 164951 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gaggagaagaaagaagaggc 232 |||||||||||||||||||| Sbjct: 27715 gaggagaagaaagaagaggc 27696
>gb|AC002350.1|AC002350 Homo sapiens 12q24 PAC RPCI3-424M6 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 167217 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 gaggagaagaaagaagaggcagat 236 |||| ||||||||||||||||||| Sbjct: 163886 gaggggaagaaagaagaggcagat 163909
>gb|AC122870.4| Mus musculus BAC clone RP23-103D17 from 3, complete sequence Length = 181063 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 85765 agaggagaagaaagaagagg 85746
>emb|CR937012.1| uncultured archaeon fos0642g6 Length = 38616 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 gaatccgaagaagtccctgtggag 77 |||||||| ||||||||||||||| Sbjct: 29769 gaatccgatgaagtccctgtggag 29746
>emb|AL808026.10| Mouse DNA sequence from clone RP23-200N16 on chromosome X, complete sequence Length = 214016 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 94727 agaggagaagaaagaagagg 94746
>emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chromosome 16, complete sequence Length = 243114 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 191382 agaggagaagaaagaagagg 191363
>gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 154271 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ccagcatcttcagaggagaa 220 |||||||||||||||||||| Sbjct: 91202 ccagcatcttcagaggagaa 91221
>emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on chromosome X, complete sequence Length = 204206 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 cttcagaggagaagaaagaa 227 |||||||||||||||||||| Sbjct: 115243 cttcagaggagaagaaagaa 115224
>emb|AL844594.4| Mouse DNA sequence from clone RP23-260P5 on chromosome X, complete sequence Length = 82772 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 agaggagaagaaagaagagg 231 |||||||||||||||||||| Sbjct: 5279 agaggagaagaaagaagagg 5260 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,024,658 Number of Sequences: 3902068 Number of extensions: 5024658 Number of successful extensions: 126504 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 126222 Number of HSP's gapped (non-prelim): 282 length of query: 530 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 507 effective length of database: 17,143,297,704 effective search space: 8691651935928 effective search space used: 8691651935928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)