ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags23l14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X07851.1|TARSBA Wheat mRNA for Rubisco subunit binding-prote... 948 0.0
2dbj|AK120503.1| Oryza sativa (japonica cultivar-group) cDNA clon... 605 e-170
3dbj|AK119217.1| Oryza sativa (japonica cultivar-group) cDNA clon... 605 e-170
4dbj|AK100602.1| Oryza sativa (japonica cultivar-group) cDNA clon... 589 e-165
5gb|BT024101.1| Zea mays clone EL01N0524E01 mRNA sequence 502 e-139
6gb|AY107545.1| Zea mays PCO123571 mRNA sequence 321 1e-84
7gb|AY108518.1| Zea mays PCO123570 mRNA sequence 301 1e-78
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 268 2e-68
10emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb... 268 2e-68
11ref|XM_470503.1| Oryza sativa (japonica cultivar-group), mRNA 155 2e-34
12gb|BT014158.1| Lycopersicon esculentum clone 133278F, mRNA sequence 145 2e-31
13gb|AY108560.1| Zea mays PCO140434 mRNA sequence 137 5e-29
14dbj|AB236859.1| Trifolium pratense RNA for putative rubisco subu... 133 7e-28
15dbj|AB236852.1| Trifolium pratense RNA for putative rubisco subu... 125 2e-25
16dbj|AB236850.1| Trifolium pratense RNA for putative rubisco subu... 125 2e-25
17dbj|AB236844.1| Trifolium pratense RNA for putative rubisco subu... 125 2e-25
18dbj|AB236783.1| Trifolium pratense RNA for putative rubisco subu... 125 2e-25
19dbj|AB236779.1| Trifolium pratense RNA for putative rubisco subu... 125 2e-25
20dbj|AB236775.1| Trifolium pratense RNA for putative rubisco subu... 125 2e-25
21ref|NM_128359.3| Arabidopsis thaliana CPN60A; ATP binding / prot... 123 7e-25
22gb|BT008784.1| Arabidopsis thaliana At2g28000 gene, complete cds 123 7e-25
23emb|Z27222.1|BNPLCAS B.napus mRNA for plastid chaperonin-60 alph... 123 7e-25
24gb|BT002441.1| Arabidopsis thaliana putative rubisco subunit bin... 123 7e-25
25dbj|AK119223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 7e-25
26gb|AY086555.1| Arabidopsis thaliana clone 25773 mRNA, complete s... 115 2e-22
27gb|AF030515.1|AF030515 Canavalia lineata chaperonin 60 alpha sub... 113 7e-22
28gb|M35599.1|BNA60CPNA B.napus plastid 60-kDa chaperonin-60 alpha... 105 2e-19
29gb|M35597.1|ATH60CPNA A.thaliana plastid 60-kDa chaperonin-60 al... 105 2e-19
30gb|BT013144.1| Lycopersicon esculentum clone 134139R, mRNA sequence 100 1e-17
31emb|X07852.1|RCRSBA Castor-bean mRNA for Rubisco subunit binding... 98 4e-17
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 96 2e-16
33gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genom... 96 2e-16
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
35gb|U21105.1|PSU21105 Pisum sativum alphacpn60 precursor (alphacp... 86 1e-13
36dbj|AB049590.1| Avicennia marina chpa mRNA for chaperonin-60 alp... 78 4e-11
37gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map ... 72 2e-09
38gb|U49357.1|ATU49357 Arabidopsis thaliana chaperonin-60 alpha su... 72 2e-09
39dbj|AK061410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
40emb|BX819680.1|CNS0A9ZT Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
41ref|NM_179480.1| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA... 56 1e-04
42ref|NM_104424.2| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA... 56 1e-04
43gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, comp... 56 1e-04
44gb|AY081501.1| Arabidopsis thaliana Rubisco subunit binding-prot... 56 1e-04
45gb|AF386945.1|AF386945 Arabidopsis thaliana Rubisco subunit bind... 56 1e-04
46emb|BX814891.1|CNS0ADZ4 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
47ref|NM_121887.1| Arabidopsis thaliana EMB3007; ATP binding / pro... 54 5e-04
48dbj|AK221565.1| Arabidopsis thaliana mRNA for chaperonin 60 alph... 54 5e-04
49gb|AF014832.1|AF014832 Bartonella doshiae 60 kDa heat shock prot... 54 5e-04
50gb|U46136.1|STU46136 Solanum tuberosum chaperonin-60 beta subuni... 54 5e-04
51gb|AY940083.1| Zymomonas mobilis subsp. francensis strain AN0101... 50 0.008
52gb|AY360225.1| Streptococcus sinensis strain HKU6 chaperonin Gro... 48 0.032
53gb|AY360224.1| Streptococcus sinensis strain HKU5 chaperonin Gro... 48 0.032
54gb|AY360223.1| Streptococcus sinensis strain HKU4 chaperonin Gro... 48 0.032
55gb|AY344499.1| Streptococcus gordonii chaperonin GroEL-like gene... 48 0.032
56gb|AF338228.1| Streptococcus gordonii ABC transporter, GroES, an... 48 0.032
57dbj|AK222126.1| Arabidopsis thaliana mRNA for putative rubisco s... 48 0.032
58gb|AY123738.1| Streptococcus gordonii strain ATCC 10558 Cpn60 (c... 48 0.032
59gb|AF449763.1| Bartonella sp. SV06uk heat shock protein Hsp 60 (... 48 0.032
60ref|NM_125033.3| Arabidopsis thaliana ATP binding / protein bind... 46 0.13
61ref|NM_001037006.1| Arabidopsis thaliana ATP binding / protein b... 46 0.13
62emb|BX831822.1|CNS09YNB Arabidopsis thaliana Full-length cDNA Co... 46 0.13
63dbj|AB019234.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 46 0.13
64gb|AF054630.1|AF054630 Oscillatoria sp. NKBG091600 GroES gene, c... 46 0.13
65gb|M35600.1|BNA60CPNB B.napus plastid 60-kDa chaperonin-60 beta-... 46 0.13
66ref|NM_112193.1| Arabidopsis thaliana ATP binding / protein bind... 44 0.51
67gb|DQ106180.1| Uncultured bacterium clone ce1_cl37_cn1 60 kDa ch... 44 0.51
68dbj|AK055769.1| Homo sapiens cDNA FLJ31207 fis, clone KIDNE2003357 44 0.51
69gb|AC114956.2| Homo sapiens chromosome 5 clone RP11-159F24, comp... 44 0.51
70gb|AC010435.6| Homo sapiens chromosome 5 clone CTD-2210P15, comp... 44 0.51
71gb|AC068655.3|AC068655 Genomic Sequence For Arabidopsis thaliana... 44 0.51
72dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 44 0.51
73dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.51
74dbj|AK074454.1| Homo sapiens cDNA FLJ23874 fis, clone LNG12957 44 0.51
75gb|M57517.1|SYCCPN60 Synechocystis sp. chaperonin 60 (cpn60) gen... 44 0.51
76gb|AY691264.1| Lactobacillus intestinalis 60 kDa chaperonin (cpn... 42 2.0
77ref|XM_756651.1| Ustilago maydis 521 hypothetical protein (UM055... 42 2.0
78emb|AL033534.1|SPBC215 S.pombe chromosome II cosmid c215 42 2.0
79gb|AF304018.1| Bartonella tribocorum heat shock protein Hsp60 (g... 42 2.0
80ref|NM_001022603.1| Schizosaccharomyces pombe 972h- hypothetical... 42 2.0
81gb|AY224481.1| Oryza sativa (japonica cultivar-group) isolate 29... 42 2.0
82gb|AF239164.1| Rhizobium leguminosarum cpn-3 (groE) operon, comp... 42 2.0
83gb|AF314169.1|AF314169 Schizosaccharomyces pombe signalosome sub... 42 2.0
84gb|AC016182.24| Homo sapiens chromosome 17, clone RP11-559N14, c... 42 2.0
85gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-1... 42 2.0
86dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 42 2.0
87gb|AF014835.1|AF014835 Bartonella vinsonii 60 kDa heat shock pro... 42 2.0
88gb|AY691258.1| Faecalibacterium prausnitzii 60 kDa chaperonin (c... 40 7.9
89gb|AY515128.1| Bartonella rattimassiliensis strain 16115 GroEL g... 40 7.9
90gb|AY515127.1| Bartonella rattimassiliensis strain 15908 GroEL g... 40 7.9
91gb|AF437115.1| Uncultured pig faeces bacterium clone 010_G02 60 ... 40 7.9
92gb|AF441380.1| Bacillus firmus 60 kDa chaperonin (cpn60) gene, p... 40 7.9
93gb|AF352802.1| Streptococcus cristatus ATCC51100 60 kDa chaperon... 40 7.9
94gb|AC010212.10| Drosophila melanogaster clone BACR32D05, complet... 40 7.9
95gb|AC163769.4| Pan troglodytes BAC clone CH251-59O12 from chromo... 40 7.9
96gb|DQ106298.1| Uncultured bacterium clone ic0_cl13_cn1 60 kDa ch... 40 7.9
97gb|DQ106229.1| Uncultured bacterium clone dl0_cl11_cn1 60 kDa ch... 40 7.9
98gb|DQ106200.1| Uncultured bacterium clone ce1_cl52_cn1 60 kDa ch... 40 7.9
99gb|DQ106087.1| Uncultured bacterium clone ce0_cl38_cn1 60 kDa ch... 40 7.9
100gb|AC125053.4| Mus musculus BAC clone RP23-389L19 from chromosom... 40 7.9
101gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete se... 40 7.9
102gb|AY116641.1| Bartonella koehlerae heat shock protein Hsp60 (gr... 40 7.9
103gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 7.9
104emb|AL691491.11| Mouse DNA sequence from clone RP23-426J14 on ch... 40 7.9
105gb|AC022017.8| Homo sapiens chromosome 10 clone RP11-210G22, com... 40 7.9
106gb|AC110990.3| Homo sapiens 3 BAC RP11-17A18 (Roswell Park Cance... 40 7.9
107gb|AC009811.14| Homo sapiens chromosome 3, clone RP11-491K7, com... 40 7.9
108gb|AF304016.1| Bartonella vinsonii subsp. arupensis heat shock p... 40 7.9
109gb|AE008558.1|AE008558 Streptococcus pneumoniae R6 section 174 o... 40 7.9
110gb|AC157943.2| Mus musculus BAC clone RP23-467N13 from chromosom... 40 7.9
111gb|AY123651.1| Lactobacillus vaginalis strain ATCC 49540 Cpn60 (... 40 7.9
112gb|AY332863.1| Yersinia bercovieri strain WS 39/98 60 kDa heat s... 40 7.9
113gb|AY332862.1| Yersinia bercovieri strain WS 27/96 60 kDa heat s... 40 7.9
114gb|AY332861.1| Yersinia bercovieri strain WS 19/96 60 kDa heat s... 40 7.9
115gb|AY332860.1| Yersinia bercovieri strain WE 82/87 60 kDa heat s... 40 7.9
116gb|AY332859.1| Yersinia bercovieri strain WA 17/96 60 kDa heat s... 40 7.9
117gb|AY332858.1| Yersinia bercovieri strain ATCC 43970 60 kDa heat... 40 7.9
118gb|AY332857.1| Yersinia bercovieri strain 6519 60 kDa heat shock... 40 7.9
119gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141... 40 7.9
120gb|AC000134.14| Homo sapiens Chromosome 11q13 BAC Clone 137c7, c... 40 7.9
121gb|AY837291.1| Vibrio sp. 12F04 heat shock protein 60 (hsp60) ge... 40 7.9
122ref|XM_397192.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 7.9
123gb|AF230949.1| Vibrio mimicus strain 85450 HSP60 gene, partial cds 40 7.9
124gb|AF230948.1| Vibrio mimicus strain ATCC33653 HSP60 gene, parti... 40 7.9
125gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome 40 7.9
126gb|AC008001.1|AC008001 Drosophila melanogaster, chromosome 3R, r... 40 7.9
127gb|AY940082.1| Zymomonas mobilis subsp. pomaceae strain LMG 5993... 40 7.9
128gb|AY940081.1| Zymomonas mobilis subsp. pomaceae strain LMG 448 ... 40 7.9
129gb|AE003674.3| Drosophila melanogaster chromosome 3R, section 10... 40 7.9
130gb|AF405420.1| Pediococcus inopinatus clone P37 HSP60 gene, part... 40 7.9
131dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.9
132dbj|AP006288.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.9
133gb|AF429661.1| Lactobacillus plantarum strain ATCC 8014 60 kDa h... 40 7.9

>emb|X07851.1|TARSBA Wheat mRNA for Rubisco subunit binding-protein alpha subunit
          Length = 1834

 Score =  948 bits (478), Expect = 0.0
 Identities = 547/569 (96%), Gaps = 1/569 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  ctgggcattctgagncgtaacttctggtgcaaaccctgtatcactaaagaaaggaatcga 72
           ||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 304 ctgggcattttgagt-gtaacttctggtgcaaaccctgtatcactaaagaaaggaataga 362

                                                                       
Query: 73  caaaactgtccagggtctgattgaagagcttgaaagaaaagctagaccagtcaagggcag 132
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 caaaactgtccagggtctgattgaagagcttgaaagaaaagctagaccagtcaagggcag 422

                                                                       
Query: 133 tggtgatatcaaagctgttgcctccatctctgctggtaacgatgaacttattggagccat 192
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 423 tggtgatatcaaagctgttgcctctatctctgctggtaacgatgaacttattggagccat 482

                                                                       
Query: 193 gattgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttc 252
           ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 483 gattgctgatgccattgacaaagtgggcccggatggtgtcctttcgatcgagtcgtcttc 542

                                                                       
Query: 253 gtcttttgagactactgttgatgttgaagaaggaatggagattgaccgtggctacatttc 312
            |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 543 atcttttgagactactgttgatgttgaggaagggatggagattgaccgaggctacatttc 602

                                                                       
Query: 313 ccctcaattcgtgacaaaccttgagaaatcgattgtggagtttgagaatgctagagttct 372
           ||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 603 ccctcaatttgtgacaaaccttgagaaatctattgtggagtttgagaacgctagagttct 662

                                                                       
Query: 373 tataactgatcagaagatcacaagcataaaggaaatcattccacttctggagcagactac 432
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tataactgatcagaagatcacaagcataaaggaaatcattccacttctggagcagactac 722

                                                                       
Query: 433 acagttgagatgtccgctattcattgtagccgaggacattactggtgaagctttggcgac 492
           |||||||||||| || || || |||||||| ||||||||||| |||||||||||||| ||
Sbjct: 723 acagttgagatgccctctgtttattgtagctgaggacattaccggtgaagctttggcaac 782

                                                                       
Query: 493 tcttgttgttaacaagctcagaggtattattaacgttgcggcgatcaaagccccaagttt 552
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 783 tcttgttgttaacaagctcagaggtattattaatgttgcggcgatcaaagccccaagttt 842

                                        
Query: 553 cggtgagcggcggaaggctgtccttcagg 581
           |||||||||||||||||||||||||||||
Sbjct: 843 cggtgagcggcggaaggctgtccttcagg 871



to top

>dbj|AK120503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122K17, full
            insert sequence
          Length = 2070

 Score =  605 bits (305), Expect = e-170
 Identities = 491/553 (88%)
 Strand = Plus / Plus

                                                                        
Query: 29   gtaacttctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggt 88
            ||||||||||||||||||||||||||||| ||||||||||| |||||||| || || |||
Sbjct: 511  gtaacttctggtgcaaaccctgtatcacttaagaaaggaatagacaaaacagtgcatggt 570

                                                                        
Query: 89   ctgattgaagagcttgaaagaaaagctagaccagtcaagggcagtggtgatatcaaagct 148
            || ||||||||||| || |  || ||||||||||||||||||||||||||||||||||||
Sbjct: 571  cttattgaagagctggagaagaaggctagaccagtcaagggcagtggtgatatcaaagct 630

                                                                        
Query: 149  gttgcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgccatt 208
            |||||||| ||||||||||| |||||||||||||||||| | |||||||||||||| |||
Sbjct: 631  gttgcctctatctctgctggcaacgatgaacttattggatctatgattgctgatgctatt 690

                                                                        
Query: 209  gacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagactact 268
            |||||||||||||| |||||||||||||| || ||||| || || ||||| |||||||||
Sbjct: 691  gacaaagtgggtcctgatggtgtcctttcaattgagtcttcatcatctttcgagactact 750

                                                                        
Query: 269  gttgatgttgaagaaggaatggagattgaccgtggctacatttcccctcaattcgtgaca 328
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 751  gttgatgttgaagaaggaatggagattgaccgtggatacatttcccctcaatttgtgaca 810

                                                                        
Query: 329  aaccttgagaaatcgattgtggagtttgagaatgctagagttcttataactgatcagaag 388
            ||||| ||||||||||| || ||||||||||||||||  |||||||| ||||||||||||
Sbjct: 811  aacctcgagaaatcgatcgtagagtttgagaatgctaaggttcttattactgatcagaag 870

                                                                        
Query: 389  atcacaagcataaaggaaatcattccacttctggagcagactacacagttgagatgtccg 448
            ||||| ||||||||||| ||  ||||| |  ||||| |||| ||||||||||||  ||| 
Sbjct: 871  atcaccagcataaaggagattcttccaatcttggagaagacaacacagttgagagctcca 930

                                                                        
Query: 449  ctattcattgtagccgaggacattactggtgaagctttggcgactcttgttgttaacaag 508
            || || ||| | || |||||||||||||| ||||||||||| || ||||||||||| |||
Sbjct: 931  ctgtttattattgctgaggacattactggcgaagctttggcaacccttgttgttaataag 990

                                                                        
Query: 509  ctcagaggtattattaacgttgcggcgatcaaagccccaagtttcggtgagcggcggaag 568
            ||| |||| ||| | || ||||| || ||||||||||||||||| |||||||| || |||
Sbjct: 991  ctccgaggaattctcaatgttgcagcaatcaaagccccaagttttggtgagcgacgcaag 1050

                         
Query: 569  gctgtccttcagg 581
            |||||||||||||
Sbjct: 1051 gctgtccttcagg 1063



to top

>dbj|AK119217.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E10, full
           insert sequence
          Length = 1543

 Score =  605 bits (305), Expect = e-170
 Identities = 491/553 (88%)
 Strand = Plus / Plus

                                                                       
Query: 29  gtaacttctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggt 88
           ||||||||||||||||||||||||||||| ||||||||||| |||||||| || || |||
Sbjct: 38  gtaacttctggtgcaaaccctgtatcacttaagaaaggaatagacaaaacagtgcatggt 97

                                                                       
Query: 89  ctgattgaagagcttgaaagaaaagctagaccagtcaagggcagtggtgatatcaaagct 148
           || ||||||||||| || |  || ||||||||||||||||||||||||||||||||||||
Sbjct: 98  cttattgaagagctggagaagaaggctagaccagtcaagggcagtggtgatatcaaagct 157

                                                                       
Query: 149 gttgcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgccatt 208
           |||||||| ||||||||||| |||||||||||||||||| | |||||||||||||| |||
Sbjct: 158 gttgcctctatctctgctggcaacgatgaacttattggatctatgattgctgatgctatt 217

                                                                       
Query: 209 gacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagactact 268
           |||||||||||||| |||||||||||||| || ||||| || || ||||| |||||||||
Sbjct: 218 gacaaagtgggtcctgatggtgtcctttcaattgagtcttcatcatctttcgagactact 277

                                                                       
Query: 269 gttgatgttgaagaaggaatggagattgaccgtggctacatttcccctcaattcgtgaca 328
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 278 gttgatgttgaagaaggaatggagattgaccgtggatacatttcccctcaatttgtgaca 337

                                                                       
Query: 329 aaccttgagaaatcgattgtggagtttgagaatgctagagttcttataactgatcagaag 388
           ||||| ||||||||||| || ||||||||||||||||  |||||||| ||||||||||||
Sbjct: 338 aacctcgagaaatcgatcgtagagtttgagaatgctaaggttcttattactgatcagaag 397

                                                                       
Query: 389 atcacaagcataaaggaaatcattccacttctggagcagactacacagttgagatgtccg 448
           ||||| ||||||||||| ||  ||||| |  ||||| |||| ||||||||||||  ||| 
Sbjct: 398 atcaccagcataaaggagattcttccaatcttggagaagacaacacagttgagagctcca 457

                                                                       
Query: 449 ctattcattgtagccgaggacattactggtgaagctttggcgactcttgttgttaacaag 508
           || || ||| | || |||||||||||||| ||||||||||| || ||||||||||| |||
Sbjct: 458 ctgtttattattgctgaggacattactggcgaagctttggcaacccttgttgttaataag 517

                                                                       
Query: 509 ctcagaggtattattaacgttgcggcgatcaaagccccaagtttcggtgagcggcggaag 568
           ||| |||| ||| | || ||||| || ||||||||||||||||| |||||||| || |||
Sbjct: 518 ctccgaggaattctcaatgttgcagcaatcaaagccccaagttttggtgagcgacgcaag 577

                        
Query: 569 gctgtccttcagg 581
           |||||||||||||
Sbjct: 578 gctgtccttcagg 590



to top

>dbj|AK100602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107D12, full
            insert sequence
          Length = 1985

 Score =  589 bits (297), Expect = e-165
 Identities = 483/545 (88%)
 Strand = Plus / Plus

                                                                        
Query: 37   tggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggtctgattga 96
            ||||||||||||||||||||| ||||||||||| |||||||| || || ||||| |||||
Sbjct: 517  tggtgcaaaccctgtatcacttaagaaaggaatagacaaaacagtgcatggtcttattga 576

                                                                        
Query: 97   agagcttgaaagaaaagctagaccagtcaagggcagtggtgatatcaaagctgttgcctc 156
            |||||| || |  || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577  agagctggagaagaaggctagaccagtcaagggcagtggtgatatcaaagctgttgcctc 636

                                                                        
Query: 157  catctctgctggtaacgatgaacttattggagccatgattgctgatgccattgacaaagt 216
             ||||||||||| |||||||||||||||||| | |||||||||||||| |||||||||||
Sbjct: 637  tatctctgctggcaacgatgaacttattggatctatgattgctgatgctattgacaaagt 696

                                                                        
Query: 217  gggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagactactgttgatgt 276
            |||||| |||||||||||||| || ||||| || || ||||| |||||||||||||||||
Sbjct: 697  gggtcctgatggtgtcctttcaattgagtcttcatcatctttcgagactactgttgatgt 756

                                                                        
Query: 277  tgaagaaggaatggagattgaccgtggctacatttcccctcaattcgtgacaaaccttga 336
            ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 757  tgaagaaggaatggagattgaccgtggatacatttcccctcaatttgtgacaaacctcga 816

                                                                        
Query: 337  gaaatcgattgtggagtttgagaatgctagagttcttataactgatcagaagatcacaag 396
            ||||||||| || ||||||||||||||||  |||||||| ||||||||||||||||| ||
Sbjct: 817  gaaatcgatcgtagagtttgagaatgctaaggttcttattactgatcagaagatcaccag 876

                                                                        
Query: 397  cataaaggaaatcattccacttctggagcagactacacagttgagatgtccgctattcat 456
            ||||||||| ||  ||||| |  ||||| |||| ||||||||||||  ||| || || ||
Sbjct: 877  cataaaggagattcttccaatcttggagaagacaacacagttgagagctccactgtttat 936

                                                                        
Query: 457  tgtagccgaggacattactggtgaagctttggcgactcttgttgttaacaagctcagagg 516
            | | || |||||||||||||| ||||||||||| || ||||||||||| |||||| ||||
Sbjct: 937  tattgctgaggacattactggcgaagctttggcaacccttgttgttaataagctccgagg 996

                                                                        
Query: 517  tattattaacgttgcggcgatcaaagccccaagtttcggtgagcggcggaaggctgtcct 576
             ||| | || ||||| || ||||||||||||||||| |||||||| || |||||||||||
Sbjct: 997  aattctcaatgttgcagcaatcaaagccccaagttttggtgagcgacgcaaggctgtcct 1056

                 
Query: 577  tcagg 581
            |||||
Sbjct: 1057 tcagg 1061



to top

>gb|BT024101.1| Zea mays clone EL01N0524E01 mRNA sequence
          Length = 2106

 Score =  502 bits (253), Expect = e-139
 Identities = 478/553 (86%)
 Strand = Plus / Plus

                                                                        
Query: 29   gtaacttctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggt 88
            ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| 
Sbjct: 514  gtaacatctggtgcaaatcctgtatcactaaagaaaggaatagacaaaactgtgcagggc 573

                                                                        
Query: 89   ctgattgaagagcttgaaagaaaagctagaccagtcaagggcagtggtgatatcaaagct 148
            || ||| | |||||||| |  ||  ||||||||||||||||  |||||||||||||||||
Sbjct: 574  ctaattcaggagcttgagaataagtctagaccagtcaagggtggtggtgatatcaaagct 633

                                                                        
Query: 149  gttgcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgccatt 208
            ||||| || ||||||||||| || |||||| |||| ||| ||||||||||||| || |||
Sbjct: 634  gttgcatctatctctgctggcaatgatgaatttatcggatccatgattgctgaagcaatt 693

                                                                        
Query: 209  gacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagactact 268
            ||||||||||| || |||||||| || || || || || || |||||||||||||| |||
Sbjct: 694  gacaaagtggggcctgatggtgttctatcaattgaatcctcctcgtcttttgagaccact 753

                                                                        
Query: 269  gttgatgttgaagaaggaatggagattgaccgtggctacatttcccctcaattcgtgaca 328
            ||||| |||||||||||||||||||||||||| || || |||||||| ||||| ||||||
Sbjct: 754  gttgaagttgaagaaggaatggagattgaccgcggttatatttccccacaatttgtgaca 813

                                                                        
Query: 329  aaccttgagaaatcgattgtggagtttgagaatgctagagttcttataactgatcagaag 388
            ||||| |||||||| ||||||||||||||||||  ||  |||||||| ||||||||||||
Sbjct: 814  aacctcgagaaatcaattgtggagtttgagaattgtaaggttcttattactgatcagaag 873

                                                                        
Query: 389  atcacaagcataaaggaaatcattccacttctggagcagactacacagttgagatgtccg 448
            ||||||||||||||||||||| ||||  || ||||| |||| |||||| |||||   || 
Sbjct: 874  atcacaagcataaaggaaatccttccgattttggagaagaccacacagctgagagcccct 933

                                                                        
Query: 449  ctattcattgtagccgaggacattactggtgaagctttggcgactcttgttgttaacaag 508
            || |||||| | || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 934  ctgttcattattgctgaggacattactggtgaagctttggcaactcttgttgttaacaag 993

                                                                        
Query: 509  ctcagaggtattattaacgttgcggcgatcaaagccccaagtttcggtgagcggcggaag 568
            ||  |||| ||| | || ||||| ||||| || || |||||||| |||||||||||||||
Sbjct: 994  cttcgaggaattctcaatgttgcagcgattaaggctccaagttttggtgagcggcggaag 1053

                         
Query: 569  gctgtccttcagg 581
            ||||| |||||||
Sbjct: 1054 gctgtacttcagg 1066



to top

>gb|AY107545.1| Zea mays PCO123571 mRNA sequence
          Length = 830

 Score =  321 bits (162), Expect = 1e-84
 Identities = 291/334 (87%)
 Strand = Plus / Plus

                                                                       
Query: 29  gtaacttctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggt 88
           ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| 
Sbjct: 497 gtaacatctggtgcaaatcctgtatcactaaagaaaggaatagacaaaactgtgcagggc 556

                                                                       
Query: 89  ctgattgaagagcttgaaagaaaagctagaccagtcaagggcagtggtgatatcaaagct 148
           || ||| | |||||||| |  ||  ||||||||||||||||  |||||||||||||||||
Sbjct: 557 ctaattcaggagcttgagaataagtctagaccagtcaagggtggtggtgatatcaaagct 616

                                                                       
Query: 149 gttgcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgccatt 208
           ||||| || ||||||||||| || |||||| |||| ||| ||||||||||||| || |||
Sbjct: 617 gttgcatctatctctgctggcaatgatgaatttatcggatccatgattgctgaagcaatt 676

                                                                       
Query: 209 gacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagactact 268
           ||||||||||| || |||||||| || || || || || || || ||||||||||| |||
Sbjct: 677 gacaaagtggggcctgatggtgttctatcaattgaatcctcctcatcttttgagaccact 736

                                                                       
Query: 269 gttgatgttgaagaaggaatggagattgaccgtggctacatttcccctcaattcgtgaca 328
           ||||| |||||||||||||||||||||||||| || || |||||||| ||||| ||||||
Sbjct: 737 gttgaagttgaagaaggaatggagattgaccgaggttatatttccccacaatttgtgaca 796

                                             
Query: 329 aaccttgagaaatcgattgtggagtttgagaatg 362
           ||||| |||||||| |||||||||||||||||||
Sbjct: 797 aacctcgagaaatcaattgtggagtttgagaatg 830



to top

>gb|AY108518.1| Zea mays PCO123570 mRNA sequence
          Length = 1387

 Score =  301 bits (152), Expect = 1e-78
 Identities = 275/316 (87%)
 Strand = Plus / Plus

                                                                       
Query: 266 actgttgatgttgaagaaggaatggagattgaccgtggctacatttcccctcaattcgtg 325
           |||||||| |||||||||||||||||||||||||| || || |||||||| ||||| |||
Sbjct: 10  actgttgaagttgaagaaggaatggagattgaccgcggttatatttccccacaatttgtg 69

                                                                       
Query: 326 acaaaccttgagaaatcgattgtggagtttgagaatgctagagttcttataactgatcag 385
           |||||||| |||||||| ||||||||||||||||||  ||  |||||||| |||||||||
Sbjct: 70  acaaacctcgagaaatcaattgtggagtttgagaattgtaaggttcttattactgatcag 129

                                                                       
Query: 386 aagatcacaagcataaaggaaatcattccacttctggagcagactacacagttgagatgt 445
           |||||||||||||||||||||||| ||||  || ||||| |||| |||||| |||||   
Sbjct: 130 aagatcacaagcataaaggaaatccttccgattttggagaagaccacacagctgagagcc 189

                                                                       
Query: 446 ccgctattcattgtagccgaggacattactggtgaagctttggcgactcttgttgttaac 505
           || || |||||| | || |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 190 cctctgttcattattgctgaggacattactggtgaagctttggcaactcttgttgttaac 249

                                                                       
Query: 506 aagctcagaggtattattaacgttgcggcgatcaaagccccaagtttcggtgagcggcgg 565
           |||||  |||| ||| | || ||||| ||||| || || |||||||| ||||||||||||
Sbjct: 250 aagcttcgaggaattctcaatgttgcagcgattaaggctccaagttttggtgagcggcgg 309

                           
Query: 566 aaggctgtccttcagg 581
           |||||||| |||||||
Sbjct: 310 aaggctgtacttcagg 325



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  268 bits (135), Expect = 2e-68
 Identities = 252/291 (86%)
 Strand = Plus / Plus

                                                                            
Query: 291      agattgaccgtggctacatttcccctcaattcgtgacaaaccttgagaaatcgattgtgg 350
                ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 10294918 agattgaccgtggatacatttcccctcaatttgtgacaaacctcgagaaatcgatcgtag 10294977

                                                                            
Query: 351      agtttgagaatgctagagttcttataactgatcagaagatcacaagcataaaggaaatca 410
                |||||||||||||||  |||||||| ||||||||||||||||| ||||||||||| ||  
Sbjct: 10294978 agtttgagaatgctaaggttcttattactgatcagaagatcaccagcataaaggagattc 10295037

                                                                            
Query: 411      ttccacttctggagcagactacacagttgagatgtccgctattcattgtagccgaggaca 470
                ||||| |  ||||| |||| ||||||||||||  ||| || || ||| | || |||||||
Sbjct: 10295038 ttccaatcttggagaagacaacacagttgagagctccactgtttattattgctgaggaca 10295097

                                                                            
Query: 471      ttactggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttg 530
                ||||||| ||||||||||| || ||||||||||| |||||| |||| ||| | || ||||
Sbjct: 10295098 ttactggcgaagctttggcaacccttgttgttaataagctccgaggaattctcaatgttg 10295157

                                                                   
Query: 531      cggcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcagg 581
                | || ||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 10295158 cagcaatcaaagccccaagttttggtgagcgacgcaaggctgtccttcagg 10295208



 Score =  198 bits (100), Expect = 1e-47
 Identities = 136/148 (91%)
 Strand = Plus / Plus

                                                                            
Query: 145      agctgttgcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgc 204
                |||||||||||| ||||||||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 10294642 agctgttgcctctatctctgctggcaacgatgaacttattggatctatgattgctgatgc 10294701

                                                                            
Query: 205      cattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagac 264
                 ||||||||||||||||| |||||||||||||| || ||||| || || ||||| |||||
Sbjct: 10294702 tattgacaaagtgggtcctgatggtgtcctttcaattgagtcttcatcatctttcgagac 10294761

                                            
Query: 265      tactgttgatgttgaagaaggaatggag 292
                ||||||||||||||||||||||||||||
Sbjct: 10294762 tactgttgatgttgaagaaggaatggag 10294789



 Score =  147 bits (74), Expect = 5e-32
 Identities = 107/118 (90%)
 Strand = Plus / Plus

                                                                            
Query: 29       gtaacttctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggt 88
                ||||||||||||||||||||||||||||| ||||||||||| |||||||| || || |||
Sbjct: 10294378 gtaacttctggtgcaaaccctgtatcacttaagaaaggaatagacaaaacagtgcatggt 10294437

                                                                          
Query: 89       ctgattgaagagcttgaaagaaaagctagaccagtcaagggcagtggtgatatcaaag 146
                || ||||||||||| || |  || ||||||||||||||||||||||||||||||||||
Sbjct: 10294438 cttattgaagagctggagaagaaggctagaccagtcaagggcagtggtgatatcaaag 10294495



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  268 bits (135), Expect = 2e-68
 Identities = 252/291 (86%)
 Strand = Plus / Plus

                                                                            
Query: 291      agattgaccgtggctacatttcccctcaattcgtgacaaaccttgagaaatcgattgtgg 350
                ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 10294800 agattgaccgtggatacatttcccctcaatttgtgacaaacctcgagaaatcgatcgtag 10294859

                                                                            
Query: 351      agtttgagaatgctagagttcttataactgatcagaagatcacaagcataaaggaaatca 410
                |||||||||||||||  |||||||| ||||||||||||||||| ||||||||||| ||  
Sbjct: 10294860 agtttgagaatgctaaggttcttattactgatcagaagatcaccagcataaaggagattc 10294919

                                                                            
Query: 411      ttccacttctggagcagactacacagttgagatgtccgctattcattgtagccgaggaca 470
                ||||| |  ||||| |||| ||||||||||||  ||| || || ||| | || |||||||
Sbjct: 10294920 ttccaatcttggagaagacaacacagttgagagctccactgtttattattgctgaggaca 10294979

                                                                            
Query: 471      ttactggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttg 530
                ||||||| ||||||||||| || ||||||||||| |||||| |||| ||| | || ||||
Sbjct: 10294980 ttactggcgaagctttggcaacccttgttgttaataagctccgaggaattctcaatgttg 10295039

                                                                   
Query: 531      cggcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcagg 581
                | || ||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 10295040 cagcaatcaaagccccaagttttggtgagcgacgcaaggctgtccttcagg 10295090



 Score =  198 bits (100), Expect = 1e-47
 Identities = 136/148 (91%)
 Strand = Plus / Plus

                                                                            
Query: 145      agctgttgcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgc 204
                |||||||||||| ||||||||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 10294524 agctgttgcctctatctctgctggcaacgatgaacttattggatctatgattgctgatgc 10294583

                                                                            
Query: 205      cattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagac 264
                 ||||||||||||||||| |||||||||||||| || ||||| || || ||||| |||||
Sbjct: 10294584 tattgacaaagtgggtcctgatggtgtcctttcaattgagtcttcatcatctttcgagac 10294643

                                            
Query: 265      tactgttgatgttgaagaaggaatggag 292
                ||||||||||||||||||||||||||||
Sbjct: 10294644 tactgttgatgttgaagaaggaatggag 10294671



 Score =  147 bits (74), Expect = 5e-32
 Identities = 107/118 (90%)
 Strand = Plus / Plus

                                                                            
Query: 29       gtaacttctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggt 88
                ||||||||||||||||||||||||||||| ||||||||||| |||||||| || || |||
Sbjct: 10294260 gtaacttctggtgcaaaccctgtatcacttaagaaaggaatagacaaaacagtgcatggt 10294319

                                                                          
Query: 89       ctgattgaagagcttgaaagaaaagctagaccagtcaagggcagtggtgatatcaaag 146
                || ||||||||||| || |  || ||||||||||||||||||||||||||||||||||
Sbjct: 10294320 cttattgaagagctggagaagaaggctagaccagtcaagggcagtggtgatatcaaag 10294377



to top

>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135439

 Score =  268 bits (135), Expect = 2e-68
 Identities = 252/291 (86%)
 Strand = Plus / Plus

                                                                         
Query: 291   agattgaccgtggctacatttcccctcaattcgtgacaaaccttgagaaatcgattgtgg 350
             ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 57837 agattgaccgtggatacatttcccctcaatttgtgacaaacctcgagaaatcgatcgtag 57896

                                                                         
Query: 351   agtttgagaatgctagagttcttataactgatcagaagatcacaagcataaaggaaatca 410
             |||||||||||||||  |||||||| ||||||||||||||||| ||||||||||| ||  
Sbjct: 57897 agtttgagaatgctaaggttcttattactgatcagaagatcaccagcataaaggagattc 57956

                                                                         
Query: 411   ttccacttctggagcagactacacagttgagatgtccgctattcattgtagccgaggaca 470
             ||||| |  ||||| |||| ||||||||||||  ||| || || ||| | || |||||||
Sbjct: 57957 ttccaatcttggagaagacaacacagttgagagctccactgtttattattgctgaggaca 58016

                                                                         
Query: 471   ttactggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttg 530
             ||||||| ||||||||||| || ||||||||||| |||||| |||| ||| | || ||||
Sbjct: 58017 ttactggcgaagctttggcaacccttgttgttaataagctccgaggaattctcaatgttg 58076

                                                                
Query: 531   cggcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcagg 581
             | || ||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 58077 cagcaatcaaagccccaagttttggtgagcgacgcaaggctgtccttcagg 58127



 Score =  198 bits (100), Expect = 1e-47
 Identities = 136/148 (91%)
 Strand = Plus / Plus

                                                                         
Query: 145   agctgttgcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgc 204
             |||||||||||| ||||||||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 57561 agctgttgcctctatctctgctggcaacgatgaacttattggatctatgattgctgatgc 57620

                                                                         
Query: 205   cattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagac 264
              ||||||||||||||||| |||||||||||||| || ||||| || || ||||| |||||
Sbjct: 57621 tattgacaaagtgggtcctgatggtgtcctttcaattgagtcttcatcatctttcgagac 57680

                                         
Query: 265   tactgttgatgttgaagaaggaatggag 292
             ||||||||||||||||||||||||||||
Sbjct: 57681 tactgttgatgttgaagaaggaatggag 57708



 Score =  147 bits (74), Expect = 5e-32
 Identities = 107/118 (90%)
 Strand = Plus / Plus

                                                                         
Query: 29    gtaacttctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggt 88
             ||||||||||||||||||||||||||||| ||||||||||| |||||||| || || |||
Sbjct: 57297 gtaacttctggtgcaaaccctgtatcacttaagaaaggaatagacaaaacagtgcatggt 57356

                                                                       
Query: 89    ctgattgaagagcttgaaagaaaagctagaccagtcaagggcagtggtgatatcaaag 146
             || ||||||||||| || |  || ||||||||||||||||||||||||||||||||||
Sbjct: 57357 cttattgaagagctggagaagaaggctagaccagtcaagggcagtggtgatatcaaag 57414



to top

>ref|XM_470503.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1998

 Score =  155 bits (78), Expect = 2e-34
 Identities = 219/266 (82%)
 Strand = Plus / Plus

                                                                       
Query: 125 aagggcagtggtgatatcaaagctgttgcctccatctctgctggtaacgatgaacttatt 184
           ||||||||||||||||| |||||||||||  |||| |||||||| || |||||  |  | 
Sbjct: 612 aagggcagtggtgatattaaagctgttgctgccatatctgctggaaatgatgacttcgtc 671

                                                                       
Query: 185 ggagccatgattgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgag 244
           ||  ||||||| ||||| || |||||||| || || || |||||||| ||||||||||||
Sbjct: 672 ggtaccatgatcgctgaggctattgacaaggttggccctgatggtgttctttcgatcgag 731

                                                                       
Query: 245 tcgtcttcgtcttttgagactactgttgatgttgaagaaggaatggagattgaccgtggc 304
           || || || ||||||||||| || ||||| |||||||||||||||||||||||| | || 
Sbjct: 732 tcatcatcatcttttgagaccaccgttgaagttgaagaaggaatggagattgacagagga 791

                                                                       
Query: 305 tacatttcccctcaattcgtgacaaaccttgagaaatcgattgtggagtttgagaatgct 364
           || || || ||||| || || ||||| | |||||| ||  |||| |||||||| ||||||
Sbjct: 792 tatatctctcctcagtttgttacaaatcctgagaagtcacttgttgagtttgaaaatgct 851

                                     
Query: 365 agagttcttataactgatcagaagat 390
           ||| ||||| | ||||| ||||||||
Sbjct: 852 agaattcttgtcactgaccagaagat 877



to top

>gb|BT014158.1| Lycopersicon esculentum clone 133278F, mRNA sequence
          Length = 2098

 Score =  145 bits (73), Expect = 2e-31
 Identities = 286/357 (80%)
 Strand = Plus / Plus

                                                                       
Query: 35  tctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggtctgatt 94
           ||||||||||| || || ||  ||||||  || || ||||||||||| | |||| |||||
Sbjct: 529 tctggtgcaaatccagtgtctttaaagaggggcattgacaaaactgtactgggtttgatt 588

                                                                       
Query: 95  gaagagcttgaaagaaaagctagaccagtcaagggcagtggtgatatcaaagctgttgcc 154
           |||||||| ||||  || |||||||| || || ||| |||  || ||||||||| |||| 
Sbjct: 589 gaagagctagaaaagaaggctagacctgttaaaggccgtgacgacatcaaagctattgct 648

                                                                       
Query: 155 tccatctctgctggtaacgatgaacttattggagccatgattgctgatgccattgacaaa 214
           || ||||||||||| || ||||||   || ||  |||||||||| ||||| |||||||||
Sbjct: 649 tcaatctctgctggaaatgatgaaagcatcggtaccatgattgcggatgcaattgacaaa 708

                                                                       
Query: 215 gtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagactactgttgat 274
           || ||||||||||||||  | || || ||||| || || || || ||||| |||||| ||
Sbjct: 709 gttggtccagatggtgtgttgtccattgagtcatcctcctccttagagacaactgttcat 768

                                                                       
Query: 275 gttgaagaaggaatggagattgaccgtggctacatttcccctcaattcgtgacaaacctt 334
           |||||||||||||||||||| ||  | || || |||||||| ||||| || || |||| |
Sbjct: 769 gttgaagaaggaatggagatcgatagaggatatatttccccacaatttgtcaccaaccct 828

                                                                    
Query: 335 gagaaatcgattgtggagtttgagaatgctagagttcttataactgatcagaagatc 391
           |||||||  |||   || |||||||||||||||||  |  | |||||||||||||||
Sbjct: 829 gagaaattaatttctgaatttgagaatgctagagtcttggttactgatcagaagatc 885



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 461  gccgaggacattactggtgaagctttggcgactcttgttgttaacaag 508
            |||||||| || || || |||||| |||| ||||||||||| ||||||
Sbjct: 955  gccgaggatatcaccggggaagctctggccactcttgttgtgaacaag 1002



to top

>gb|AY108560.1| Zea mays PCO140434 mRNA sequence
          Length = 2143

 Score =  137 bits (69), Expect = 5e-29
 Identities = 255/317 (80%)
 Strand = Plus / Plus

                                                                       
Query: 122 gtcaagggcagtggtgatatcaaagctgttgcctccatctctgctggtaacgatgaactt 181
           |||||||| ||||| ||||| |||||||||||  |||| || ||||| || |||||| ||
Sbjct: 677 gtcaagggtagtggggatattaaagctgttgctgccatatcagctggaaatgatgaattt 736

                                                                       
Query: 182 attggagccatgattgctgatgccattgacaaagtgggtccagatggtgtcctttcgatc 241
            ||||  | ||||| || || || |||||||| || || || ||||||||||| || || 
Sbjct: 737 gttgggactatgatcgccgaagctattgacaaggttggccctgatggtgtcctctcaatt 796

                                                                       
Query: 242 gagtcgtcttcgtcttttgagactactgttgatgttgaagaaggaatggagattgaccgt 301
           |||||||| ||||| |||||||| || ||||| ||||||||||| |||||| ||||| | 
Sbjct: 797 gagtcgtcatcgtcgtttgagaccacagttgaagttgaagaagggatggagcttgacaga 856

                                                                       
Query: 302 ggctacatttcccctcaattcgtgacaaaccttgagaaatcgattgtggagtttgagaat 361
           || || || |||||||| || || || |||||||| ||||| ||||| ||||| || |||
Sbjct: 857 ggatatatctcccctcagtttgtcactaaccttgaaaaatctattgttgagttcgaaaat 916

                                                                       
Query: 362 gctagagttcttataactgatcagaagatcacaagcataaaggaaatcattccacttctg 421
           ||| |  ||||| | ||||||||||||||  ||   ||||| ||||| ||||| ||  ||
Sbjct: 917 gctcggattcttgtcactgatcagaagatatcatcgataaaagaaattattcctctgttg 976

                            
Query: 422 gagcagactacacagtt 438
           |||||||| ||||||||
Sbjct: 977 gagcagacaacacagtt 993



to top

>dbj|AB236859.1| Trifolium pratense RNA for putative rubisco subunit binding-protein
           alpha subunit, complete cds, clone: C766
          Length = 1971

 Score =  133 bits (67), Expect = 7e-28
 Identities = 208/255 (81%)
 Strand = Plus / Plus

                                                                       
Query: 136 tgatatcaaagctgttgcctccatctctgctggtaacgatgaacttattggagccatgat 195
           |||||| ||||||||||| || || |||||||| || |||||  | || |||   |||||
Sbjct: 590 tgatattaaagctgttgcttctatttctgctggaaatgatgagttgatcggaaaaatgat 649

                                                                       
Query: 196 tgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtc 255
           |||||| || |||||||| || || || ||||||||  | || || |||||||| || ||
Sbjct: 650 tgctgaagcaattgacaaggttggacccgatggtgttttatctattgagtcgtcgtcatc 709

                                                                       
Query: 256 ttttgagactactgttgatgttgaagaaggaatggagattgaccgtggctacatttcccc 315
            |||||||| || ||||| |||||||||||||||||||||||| | || || || |||||
Sbjct: 710 atttgagacaaccgttgaagttgaagaaggaatggagattgacagaggttatatctcccc 769

                                                                       
Query: 316 tcaattcgtgacaaaccttgagaaatcgattgtggagtttgagaatgctagagttcttat 375
            ||||| || || || ||||||||||| ||||| || ||||||||||| |||||| | ||
Sbjct: 770 ccaatttgttacgaatcttgagaaatcaattgttgaatttgagaatgcaagagttttgat 829

                          
Query: 376 aactgatcagaagat 390
           ||| |||||||||||
Sbjct: 830 aaccgatcagaagat 844



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 473 actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 532
           ||||||||||||||||| || |||||||| || |||||  | |||||  |||| ||||| 
Sbjct: 927 actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 986

                      
Query: 533 gcgatcaaagc 543
           || ||||||||
Sbjct: 987 gccatcaaagc 997



to top

>dbj|AB236852.1| Trifolium pratense RNA for putative rubisco subunit binding-protein
           alpha subunit, partial cds, clone: C618
          Length = 1443

 Score =  125 bits (63), Expect = 2e-25
 Identities = 207/255 (81%)
 Strand = Plus / Plus

                                                                       
Query: 136 tgatatcaaagctgttgcctccatctctgctggtaacgatgaacttattggagccatgat 195
           |||||| ||||||||||| || || |||||||| || |||||  | || |||   |||||
Sbjct: 185 tgatattaaagctgttgcttctatttctgctggaaatgatgagttgatcggaaaaatgat 244

                                                                       
Query: 196 tgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtc 255
           |||||| || |||| ||| || || || ||||||||  | || || |||||||| || ||
Sbjct: 245 tgctgaagcaattggcaaggttggacccgatggtgttttatctattgagtcgtcgtcatc 304

                                                                       
Query: 256 ttttgagactactgttgatgttgaagaaggaatggagattgaccgtggctacatttcccc 315
            |||||||| || ||||| |||||||||||||||||||||||| | || || || |||||
Sbjct: 305 atttgagacaaccgttgaagttgaagaaggaatggagattgacagagggtatatctcccc 364

                                                                       
Query: 316 tcaattcgtgacaaaccttgagaaatcgattgtggagtttgagaatgctagagttcttat 375
            ||||| || || || ||||||||||| ||||| || ||||||||||| |||||| | ||
Sbjct: 365 ccaatttgttacgaatcttgagaaatcaattgttgaatttgagaatgcaagagttttgat 424

                          
Query: 376 aactgatcagaagat 390
           ||| |||||||||||
Sbjct: 425 aaccgatcagaagat 439



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 473 actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 532
           ||||||||||||||||| || |||||||| || |||||  | |||||  |||| ||||| 
Sbjct: 522 actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 581

                      
Query: 533 gcgatcaaagc 543
           || ||||||||
Sbjct: 582 gccatcaaagc 592



to top

>dbj|AB236850.1| Trifolium pratense RNA for putative rubisco subunit binding-protein
           alpha subunit, complete cds, clone: C580
          Length = 1986

 Score =  125 bits (63), Expect = 2e-25
 Identities = 207/255 (81%)
 Strand = Plus / Plus

                                                                       
Query: 136 tgatatcaaagctgttgcctccatctctgctggtaacgatgaacttattggagccatgat 195
           |||||| ||||||||||| || || |||||||| || |||||  | || |||   |||||
Sbjct: 612 tgatattaaagctgttgcttctatttctgctggaaatgatgagttgatcggaaaaatgat 671

                                                                       
Query: 196 tgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtc 255
           |||||| || |||| ||| || || || ||||||||  | || || |||||||| || ||
Sbjct: 672 tgctgaagcaattggcaaggttggacccgatggtgttttatctattgagtcgtcgtcatc 731

                                                                       
Query: 256 ttttgagactactgttgatgttgaagaaggaatggagattgaccgtggctacatttcccc 315
            |||||||| || ||||| |||||||||||||||||||||||| | || || || |||||
Sbjct: 732 atttgagacaaccgttgaagttgaagaaggaatggagattgacagaggttatatctcccc 791

                                                                       
Query: 316 tcaattcgtgacaaaccttgagaaatcgattgtggagtttgagaatgctagagttcttat 375
            ||||| || || || ||||||||||| ||||| || ||||||||||| |||||| | ||
Sbjct: 792 ccaatttgttacgaatcttgagaaatcaattgttgaatttgagaatgcaagagttttgat 851

                          
Query: 376 aactgatcagaagat 390
           ||| |||||||||||
Sbjct: 852 aaccgatcagaagat 866



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                        
Query: 473  actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 532
            ||||||||||||||||| || |||||||| || |||||  | |||||  |||| ||||| 
Sbjct: 949  actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 1008

                       
Query: 533  gcgatcaaagc 543
            || ||||||||
Sbjct: 1009 gccatcaaagc 1019



to top

>dbj|AB236844.1| Trifolium pratense RNA for putative rubisco subunit binding-protein
           alpha subunit, complete cds, clone: C447
          Length = 1999

 Score =  125 bits (63), Expect = 2e-25
 Identities = 207/255 (81%)
 Strand = Plus / Plus

                                                                       
Query: 136 tgatatcaaagctgttgcctccatctctgctggtaacgatgaacttattggagccatgat 195
           |||||| ||||||||||| || || |||||||| || |||||  | || |||   |||||
Sbjct: 608 tgatattaaagctgttgcttctatttctgctggaaatgatgagttgatcggaaaaatgat 667

                                                                       
Query: 196 tgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtc 255
           |||||| || |||| ||| || || || ||||||||  | || || |||||||| || ||
Sbjct: 668 tgctgaagcaattggcaaggttggacccgatggtgttttatctattgagtcgtcgtcatc 727

                                                                       
Query: 256 ttttgagactactgttgatgttgaagaaggaatggagattgaccgtggctacatttcccc 315
            |||||||| || ||||| |||||||||||||||||||||||| | || || || |||||
Sbjct: 728 atttgagacaaccgttgaagttgaagaaggaatggagattgacagagggtatatctcccc 787

                                                                       
Query: 316 tcaattcgtgacaaaccttgagaaatcgattgtggagtttgagaatgctagagttcttat 375
            ||||| || || || ||||||||||| ||||| || ||||||||||| |||||| | ||
Sbjct: 788 ccaatttgttacgaatcttgagaaatcaattgttgaatttgagaatgcaagagttttgat 847

                          
Query: 376 aactgatcagaagat 390
           ||| |||||||||||
Sbjct: 848 aaccgatcagaagat 862



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                        
Query: 473  actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 532
            ||||||||||||||||| || |||||||| || |||||  | |||||  |||| ||||| 
Sbjct: 945  actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 1004

                       
Query: 533  gcgatcaaagc 543
            || ||||||||
Sbjct: 1005 gccatcaaagc 1015



to top

>dbj|AB236783.1| Trifolium pratense RNA for putative rubisco subunit binding-protein
           alpha subunit, complete cds, clone: C1772
          Length = 2038

 Score =  125 bits (63), Expect = 2e-25
 Identities = 207/255 (81%)
 Strand = Plus / Plus

                                                                       
Query: 136 tgatatcaaagctgttgcctccatctctgctggtaacgatgaacttattggagccatgat 195
           |||||| ||||||||||| || || |||||||| || |||||  | || |||   |||||
Sbjct: 600 tgatattaaagctgttgcttctatttctgctggaaatgatgagttgatcggaaaaatgat 659

                                                                       
Query: 196 tgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtc 255
           |||||| || |||| ||| || || || ||||||||  | || || |||||||| || ||
Sbjct: 660 tgctgaagcaattggcaaggttggacccgatggtgttttatctattgagtcgtcgtcatc 719

                                                                       
Query: 256 ttttgagactactgttgatgttgaagaaggaatggagattgaccgtggctacatttcccc 315
            |||||||| || ||||| |||||||||||||||||||||||| | || || || |||||
Sbjct: 720 atttgagacaaccgttgaagttgaagaaggaatggagattgacagagggtatatctcccc 779

                                                                       
Query: 316 tcaattcgtgacaaaccttgagaaatcgattgtggagtttgagaatgctagagttcttat 375
            ||||| || || || ||||||||||| ||||| || ||||||||||| |||||| | ||
Sbjct: 780 ccaatttgttacgaatcttgagaaatcaattgttgaatttgagaatgcaagagttttgat 839

                          
Query: 376 aactgatcagaagat 390
           ||| |||||||||||
Sbjct: 840 aaccgatcagaagat 854



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                        
Query: 473  actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 532
            ||||||||||||||||| || |||||||| || |||||  | |||||  |||| ||||| 
Sbjct: 937  actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 996

                       
Query: 533  gcgatcaaagc 543
            || ||||||||
Sbjct: 997  gccatcaaagc 1007



to top

>dbj|AB236779.1| Trifolium pratense RNA for putative rubisco subunit binding-protein
           alpha subunit, complete cds, clone: C1724
          Length = 1982

 Score =  125 bits (63), Expect = 2e-25
 Identities = 207/255 (81%)
 Strand = Plus / Plus

                                                                       
Query: 136 tgatatcaaagctgttgcctccatctctgctggtaacgatgaacttattggagccatgat 195
           |||||| ||||||||||| || || |||||||| || |||||  | || |||   |||||
Sbjct: 592 tgatattaaagctgttgcttctatttctgctggaaatgatgagttgatcggaaaaatgat 651

                                                                       
Query: 196 tgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtc 255
           |||||| || |||| ||| || || || ||||||||  | || || |||||||| || ||
Sbjct: 652 tgctgaagcaattggcaaggttggacccgatggtgttttatctattgagtcgtcgtcatc 711

                                                                       
Query: 256 ttttgagactactgttgatgttgaagaaggaatggagattgaccgtggctacatttcccc 315
            |||||||| || ||||| |||||||||||||||||||||||| | || || || |||||
Sbjct: 712 atttgagacaaccgttgaagttgaagaaggaatggagattgacagagggtatatctcccc 771

                                                                       
Query: 316 tcaattcgtgacaaaccttgagaaatcgattgtggagtttgagaatgctagagttcttat 375
            ||||| || || || ||||||||||| ||||| || ||||||||||| |||||| | ||
Sbjct: 772 ccaatttgttacgaatcttgagaaatcaattgttgaatttgagaatgcaagagttttgat 831

                          
Query: 376 aactgatcagaagat 390
           ||| |||||||||||
Sbjct: 832 aaccgatcagaagat 846



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 473 actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 532
           ||||||||||||||||| || |||||||| || |||||  | |||||  |||| ||||| 
Sbjct: 929 actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 988

                      
Query: 533 gcgatcaaagc 543
           || ||||||||
Sbjct: 989 gccatcaaagc 999



to top

>dbj|AB236775.1| Trifolium pratense RNA for putative rubisco subunit binding-protein
           alpha subunit, partial cds, clone: C1598
          Length = 2018

 Score =  125 bits (63), Expect = 2e-25
 Identities = 207/255 (81%)
 Strand = Plus / Plus

                                                                       
Query: 136 tgatatcaaagctgttgcctccatctctgctggtaacgatgaacttattggagccatgat 195
           |||||| ||||||||||| || || |||||||| || |||||  | || |||   |||||
Sbjct: 536 tgatattaaagctgttgcttctatttctgctggaaatgatgagttgatcggaaaaatgat 595

                                                                       
Query: 196 tgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtc 255
           |||||| || |||| ||| || || || ||||||||  | || || |||||||| || ||
Sbjct: 596 tgctgaagcaattggcaaggttggacccgatggtgttttatctattgagtcgtcgtcatc 655

                                                                       
Query: 256 ttttgagactactgttgatgttgaagaaggaatggagattgaccgtggctacatttcccc 315
            |||||||| || ||||| |||||||||||||||||||||||| | || || || |||||
Sbjct: 656 atttgagacaaccgttgaagttgaagaaggaatggagattgacagagggtatatctcccc 715

                                                                       
Query: 316 tcaattcgtgacaaaccttgagaaatcgattgtggagtttgagaatgctagagttcttat 375
            ||||| || || || ||||||||||| ||||| || ||||||||||| |||||| | ||
Sbjct: 716 ccaatttgttacgaatcttgagaaatcaattgttgaatttgagaatgcaagagttttgat 775

                          
Query: 376 aactgatcagaagat 390
           ||| |||||||||||
Sbjct: 776 aaccgatcagaagat 790



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 473 actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 532
           ||||||||||||||||| || |||||||| || |||||  | |||||  |||| ||||| 
Sbjct: 873 actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 932

                      
Query: 533 gcgatcaaagc 543
           || ||||||||
Sbjct: 933 gccatcaaagc 943



to top

>ref|NM_128359.3| Arabidopsis thaliana CPN60A; ATP binding / protein binding
           AT2G28000 (CPN60A) mRNA, complete cds
          Length = 2103

 Score =  123 bits (62), Expect = 7e-25
 Identities = 287/362 (79%)
 Strand = Plus / Plus

                                                                       
Query: 32  acttctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggtctg 91
           ||||||||||| || || || ||||| ||||  ||||| || || ||||| || ||||||
Sbjct: 591 acttctggtgcgaatcccgtttcactcaagaggggaattgataagactgttcaaggtctg 650

                                                                       
Query: 92  attgaagagcttgaaagaaaagctagaccagtcaagggcagtggtgatatcaaagctgtt 151
           || ||||||||| | |  |||||||| || || || ||  ||| ||| |||| |||||| 
Sbjct: 651 atcgaagagcttcagaagaaagctaggcccgtgaaaggtcgtgatgacatcagagctgtg 710

                                                                       
Query: 152 gcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgccattgac 211
           || || ||||||||||| || ||||| ||||| ||  | ||||||||||||||||| |||
Sbjct: 711 gcttctatctctgctggaaatgatgaccttatagggtcaatgattgctgatgccatcgac 770

                                                                       
Query: 212 aaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagactactgtt 271
           ||||| || || ||||||||  | || || || || || || ||||||||||| || || 
Sbjct: 771 aaagttggacctgatggtgttttgtccattgaatcttcatcttcttttgagaccacggtc 830

                                                                       
Query: 272 gatgttgaagaaggaatggagattgaccgtggctacatttcccctcaattcgtgacaaac 331
           || ||||||||||| |||||||||||| | || ||||| || ||||| || || ||||||
Sbjct: 831 gaagttgaagaagggatggagattgacagaggttacatctcgcctcagtttgttacaaac 890

                                                                       
Query: 332 cttgagaaatcgattgtggagtttgagaatgctagagttcttataactgatcagaagatc 391
           | |||||||    | |  ||||||||||||||||| ||  | || |||||||||||||||
Sbjct: 891 cctgagaaactactagctgagtttgagaatgctagggtattgatcactgatcagaagatc 950

             
Query: 392 ac 393
           ||
Sbjct: 951 ac 952



to top

>gb|BT008784.1| Arabidopsis thaliana At2g28000 gene, complete cds
          Length = 1761

 Score =  123 bits (62), Expect = 7e-25
 Identities = 287/362 (79%)
 Strand = Plus / Plus

                                                                       
Query: 32  acttctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggtctg 91
           ||||||||||| || || || ||||| ||||  ||||| || || ||||| || ||||||
Sbjct: 454 acttctggtgcgaatcccgtttcactcaagaggggaattgataagactgttcaaggtctg 513

                                                                       
Query: 92  attgaagagcttgaaagaaaagctagaccagtcaagggcagtggtgatatcaaagctgtt 151
           || ||||||||| | |  |||||||| || || || ||  ||| ||| |||| |||||| 
Sbjct: 514 atcgaagagcttcagaagaaagctaggcccgtgaaaggtcgtgatgacatcagagctgtg 573

                                                                       
Query: 152 gcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgccattgac 211
           || || ||||||||||| || ||||| ||||| ||  | ||||||||||||||||| |||
Sbjct: 574 gcttctatctctgctggaaatgatgaccttatagggtcaatgattgctgatgccatcgac 633

                                                                       
Query: 212 aaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagactactgtt 271
           ||||| || || ||||||||  | || || || || || || ||||||||||| || || 
Sbjct: 634 aaagttggacctgatggtgttttgtccattgaatcttcatcttcttttgagaccacggtc 693

                                                                       
Query: 272 gatgttgaagaaggaatggagattgaccgtggctacatttcccctcaattcgtgacaaac 331
           || ||||||||||| |||||||||||| | || ||||| || ||||| || || ||||||
Sbjct: 694 gaagttgaagaagggatggagattgacagaggttacatctcgcctcagtttgttacaaac 753

                                                                       
Query: 332 cttgagaaatcgattgtggagtttgagaatgctagagttcttataactgatcagaagatc 391
           | |||||||    | |  ||||||||||||||||| ||  | || |||||||||||||||
Sbjct: 754 cctgagaaactactagctgagtttgagaatgctagggtattgatcactgatcagaagatc 813

             
Query: 392 ac 393
           ||
Sbjct: 814 ac 815



to top

>emb|Z27222.1|BNPLCAS B.napus mRNA for plastid chaperonin-60 alpha subunit
          Length = 1975

 Score =  123 bits (62), Expect = 7e-25
 Identities = 215/266 (80%)
 Strand = Plus / Plus

                                                                       
Query: 59  aagaaaggaatcgacaaaactgtccagggtctgattgaagagcttgaaagaaaagctaga 118
           |||| |||||||||||| || || || | | |||| ||||||||||| |  | | |||||
Sbjct: 531 aagagaggaatcgacaagaccgttcaagctttgatagaagagcttgagaagagatctaga 590

                                                                       
Query: 119 ccagtcaagggcagtggtgatatcaaagctgttgcctccatctctgctggtaacgatgaa 178
           || ||||| ||| || | || |||||||| || ||  | ||||| ||||| |||||||| 
Sbjct: 591 cctgtcaaaggcggtcgagacatcaaagccgtggctacaatctcagctggaaacgatgag 650

                                                                       
Query: 179 cttattggagccatgattgctgatgccattgacaaagtgggtccagatggtgtcctttcg 238
           ||||||||||| ||||| ||||| ||||||||||||||||| || |||||||||  | | 
Sbjct: 651 cttattggagcgatgatcgctgacgccattgacaaagtgggacctgatggtgtctctcca 710

                                                                       
Query: 239 atcgagtcgtcttcgtcttttgagactactgttgatgttgaagaaggaatggagattgac 298
           || ||||| || || || |||||||| || || || || |||||||| ||||||||||||
Sbjct: 711 attgagtcctcatcctcctttgagaccaccgtcgaagtcgaagaagggatggagattgac 770

                                     
Query: 299 cgtggctacatttcccctcaattcgt 324
            | |||||||| |||||||| |||||
Sbjct: 771 agaggctacatctcccctcagttcgt 796



to top

>gb|BT002441.1| Arabidopsis thaliana putative rubisco subunit binding-protein alpha
           subunit (At2g28000) mRNA, complete cds
          Length = 2020

 Score =  123 bits (62), Expect = 7e-25
 Identities = 287/362 (79%)
 Strand = Plus / Plus

                                                                       
Query: 32  acttctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggtctg 91
           ||||||||||| || || || ||||| ||||  ||||| || || ||||| || ||||||
Sbjct: 536 acttctggtgcgaatcccgtttcactcaagaggggaattgataagactgttcaaggtctg 595

                                                                       
Query: 92  attgaagagcttgaaagaaaagctagaccagtcaagggcagtggtgatatcaaagctgtt 151
           || ||||||||| | |  |||||||| || || || ||  ||| ||| |||| |||||| 
Sbjct: 596 atcgaagagcttcagaagaaagctaggcccgtgaaaggtcgtgatgacatcagagctgtg 655

                                                                       
Query: 152 gcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgccattgac 211
           || || ||||||||||| || ||||| ||||| ||  | ||||||||||||||||| |||
Sbjct: 656 gcttctatctctgctggaaatgatgaccttatagggtcaatgattgctgatgccatcgac 715

                                                                       
Query: 212 aaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagactactgtt 271
           ||||| || || ||||||||  | || || || || || || ||||||||||| || || 
Sbjct: 716 aaagttggacctgatggtgttttgtccattgaatcttcatcttcttttgagaccacggtc 775

                                                                       
Query: 272 gatgttgaagaaggaatggagattgaccgtggctacatttcccctcaattcgtgacaaac 331
           || ||||||||||| |||||||||||| | || ||||| || ||||| || || ||||||
Sbjct: 776 gaagttgaagaagggatggagattgacagaggttacatctcgcctcagtttgttacaaac 835

                                                                       
Query: 332 cttgagaaatcgattgtggagtttgagaatgctagagttcttataactgatcagaagatc 391
           | |||||||    | |  ||||||||||||||||| ||  | || |||||||||||||||
Sbjct: 836 cctgagaaactactagctgagtttgagaatgctagggtattgatcactgatcagaagatc 895

             
Query: 392 ac 393
           ||
Sbjct: 896 ac 897



to top

>dbj|AK119223.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-D06, full
           insert sequence
          Length = 1119

 Score =  123 bits (62), Expect = 7e-25
 Identities = 104/118 (88%)
 Strand = Plus / Plus

                                                                       
Query: 464 gaggacattactggtgaagctttggcgactcttgttgttaacaagctcagaggtattatt 523
           |||||||||||||| ||||||||||| || ||||||||||| |||||| |||| ||| | 
Sbjct: 15  gaggacattactggcgaagctttggcaacccttgttgttaataagctccgaggaattctc 74

                                                                     
Query: 524 aacgttgcggcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcagg 581
           || ||||| || ||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 75  aatgttgcagcaatcaaagccccaagttttggtgagcgacgcaaggctgtccttcagg 132



to top

>gb|AY086555.1| Arabidopsis thaliana clone 25773 mRNA, complete sequence
          Length = 1996

 Score =  115 bits (58), Expect = 2e-22
 Identities = 286/362 (79%)
 Strand = Plus / Plus

                                                                       
Query: 32  acttctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggtctg 91
           ||||||||||| || || || ||||| ||||  ||||| || || ||||| || ||||||
Sbjct: 531 acttctggtgcgaatcccgtttcactcaagaggggaattgataagactgttcaaggtctg 590

                                                                       
Query: 92  attgaagagcttgaaagaaaagctagaccagtcaagggcagtggtgatatcaaagctgtt 151
           || ||||||||| | |  |||||||| || || || |   ||| ||| |||| |||||| 
Sbjct: 591 atcgaagagcttcagaagaaagctaggcccgtgaaagatcgtgatgacatcagagctgtg 650

                                                                       
Query: 152 gcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgccattgac 211
           || || ||||||||||| || ||||| ||||| ||  | ||||||||||||||||| |||
Sbjct: 651 gcttctatctctgctggaaatgatgaccttatagggtcaatgattgctgatgccatcgac 710

                                                                       
Query: 212 aaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagactactgtt 271
           ||||| || || ||||||||  | || || || || || || ||||||||||| || || 
Sbjct: 711 aaagttggacctgatggtgttttgtccattgaatcttcatcttcttttgagaccacggtc 770

                                                                       
Query: 272 gatgttgaagaaggaatggagattgaccgtggctacatttcccctcaattcgtgacaaac 331
           || ||||||||||| |||||||||||| | || ||||| || ||||| || || ||||||
Sbjct: 771 gaagttgaagaagggatggagattgacagaggttacatctcgcctcagtttgttacaaac 830

                                                                       
Query: 332 cttgagaaatcgattgtggagtttgagaatgctagagttcttataactgatcagaagatc 391
           | |||||||    | |  ||||||||||||||||| ||  | || |||||||||||||||
Sbjct: 831 cctgagaaactactagctgagtttgagaatgctagggtattgatcactgatcagaagatc 890

             
Query: 392 ac 393
           ||
Sbjct: 891 ac 892



to top

>gb|AF030515.1|AF030515 Canavalia lineata chaperonin 60 alpha subunit mRNA, nuclear gene
           encoding chloroplast protein, complete cds
          Length = 2040

 Score =  113 bits (57), Expect = 7e-22
 Identities = 206/255 (80%), Gaps = 3/255 (1%)
 Strand = Plus / Plus

                                                                       
Query: 136 tgatatcaaagctgttgcctccatctctgctggtaacgatgaacttattggagccatgat 195
           |||||||||||||||||| || || |||||||| || |||||  | ||||||   |||||
Sbjct: 631 tgatatcaaagctgttgcttctatttctgctggaaatgatgagttgattggaaaaatgat 690

                                                                       
Query: 196 tgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtc 255
           ||| || || |||||||| || || || ||||||||  | || || ||||| || || ||
Sbjct: 691 tgcggaagcaattgacaaggttggacctgatggtgttttatccattgagtcttcgtcctc 750

                                                                       
Query: 256 ttttgagactactgttgatgttgaagaaggaatggagattgaccgtggctacatttcccc 315
           ||||||||| || ||||| |||||||||||||| ||||||||| | || ||||| ||| |
Sbjct: 751 ttttgagacgacggttgaagttgaagaaggaattgagattgacagagggtacatctcctc 810

                                                                       
Query: 316 tcaattcgtgacaaaccttgagaaatcgattgtggagtttgagaatgctagagttcttat 375
              ||| || |||||||||||||| || |||||||| ||||||||||| |||||  |  |
Sbjct: 811 ---atttgttacaaaccttgagaagtcaattgtggaatttgagaatgcaagagtcttggt 867

                          
Query: 376 aactgatcagaagat 390
            ||||||||||||||
Sbjct: 868 tactgatcagaagat 882



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Plus

                                                                        
Query: 473  actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 532
            |||||||| |||||||| || |||||||| || |||||  | |||||  |||| || || 
Sbjct: 965  actggtgaggctttggctacccttgttgtgaataagctgcgcggtatccttaatgtagct 1024

                                                           
Query: 533  gcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttca 579
            || |||||||| || || || ||||||||||| ||||||||||||||
Sbjct: 1025 gccatcaaagctcctagctttggtgagcggcgaaaggctgtccttca 1071



to top

>gb|M35599.1|BNA60CPNA B.napus plastid 60-kDa chaperonin-60 alpha-polypeptide (cpn-60
           alpha) mRNA, 3' end
          Length = 1789

 Score =  105 bits (53), Expect = 2e-19
 Identities = 152/185 (82%)
 Strand = Plus / Plus

                                                                       
Query: 113 gctagaccagtcaagggcagtggtgatatcaaagctgttgcctccatctctgctggtaac 172
           |||||||| ||||| ||| || |||| |||||||| || ||  | ||||||||||| || 
Sbjct: 417 gctagacctgtcaaaggcggtagtgacatcaaagccgtggctacaatctctgctggaaat 476

                                                                       
Query: 173 gatgaacttattggagccatgattgctgatgccattgacaaagtgggtccagatggtgtc 232
           ||||| ||| | ||| | |||||||||||||||||||| ||||| || || |||||||| 
Sbjct: 477 gatgagcttgtgggaacaatgattgctgatgccattgataaagttggacctgatggtgtt 536

                                                                       
Query: 233 ctttcgatcgagtcgtcttcgtcttttgagactactgttgatgttgaagaaggaatggag 292
            | || || || || ||||| || ||||||||||| || || ||||||||||||||||||
Sbjct: 537 ttgtccattgaatcttcttcctcctttgagactaccgtcgaagttgaagaaggaatggag 596

                
Query: 293 attga 297
           |||||
Sbjct: 597 attga 601



to top

>gb|M35597.1|ATH60CPNA A.thaliana plastid 60-kDa chaperonin-60 alpha polypeptide (cpn-60
           alpha) mRNA, partial cds
          Length = 735

 Score =  105 bits (53), Expect = 2e-19
 Identities = 200/249 (80%)
 Strand = Plus / Plus

                                                                       
Query: 145 agctgttgcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgc 204
           |||||| || || ||||||||||| || ||||| ||||| ||  | ||||||||||||||
Sbjct: 369 agctgtggcttctatctctgctggaaatgatgaccttatagggtcaatgattgctgatgc 428

                                                                       
Query: 205 cattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagac 264
           ||| |||||||| || || ||||||||  | || || || || || || |||||||||||
Sbjct: 429 catcgacaaagttggacctgatggtgttttgtccattgaatcttcatcttcttttgagac 488

                                                                       
Query: 265 tactgttgatgttgaagaaggaatggagattgaccgtggctacatttcccctcaattcgt 324
            || || || ||||||||||| |||||||||||| | || ||||| || ||||| || ||
Sbjct: 489 cacggtcgaagttgaagaagggatggagattgacagaggttacatctcgcctcagtttgt 548

                                                                       
Query: 325 gacaaaccttgagaaatcgattgtggagtttgagaatgctagagttcttataactgatca 384
            ||||||| |||||||    | |  ||||||||||||||||| ||  | || ||||||||
Sbjct: 549 tacaaaccctgagaaactactagctgagtttgagaatgctagggtattgatcactgatca 608

                    
Query: 385 gaagatcac 393
           |||||||||
Sbjct: 609 gaagatcac 617



to top

>gb|BT013144.1| Lycopersicon esculentum clone 134139R, mRNA sequence
          Length = 2052

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 131/158 (82%)
 Strand = Plus / Plus

                                                                       
Query: 140 atcaaagctgttgcctccatctctgctggtaacgatgaacttattggagccatgattgct 199
           ||||||||| |||| || ||||||||||| || |||||    |||||| |||||||||||
Sbjct: 646 atcaaagctattgcttctatctctgctggaaatgatgatgagattggaaccatgattgct 705

                                                                       
Query: 200 gatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtctttt 259
           ||||| ||||||||||| || || |||||||| || ||||| ||||| || || || |||
Sbjct: 706 gatgcaattgacaaagttggacctgatggtgttctatcgattgagtcatcctcttccttt 765

                                                 
Query: 260 gagactactgttgatgttgaagaaggaatggagattga 297
           || || ||||||  ||||||||| || |||||||||||
Sbjct: 766 gaaaccactgttcgtgttgaagaggggatggagattga 803



to top

>emb|X07852.1|RCRSBA Castor-bean mRNA for Rubisco subunit binding-protein alpha subunit
          Length = 1488

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 160/197 (81%)
 Strand = Plus / Plus

                                                                       
Query: 143 aaagctgttgcctccatctctgctggtaacgatgaacttattggagccatgattgctgat 202
           ||||||||||| ||||| |||||||| || ||||| || |||||  | ||||||||||||
Sbjct: 395 aaagctgttgcttccatttctgctggaaatgatgagctcattgggacaatgattgctgat 454

                                                                       
Query: 203 gccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgag 262
           || |||||||| || || || |||||||| || || || ||||| || || || ||||||
Sbjct: 455 gcaattgacaaggttgggcctgatggtgttctatcaattgagtcatcatcctcatttgag 514

                                                                       
Query: 263 actactgttgatgttgaagaaggaatggagattgaccgtggctacatttcccctcaattc 322
           || || || || |||||||||||||||||||| ||| | || || || || |||||||| 
Sbjct: 515 acaacagtagaagttgaagaaggaatggagatagacagaggttatatctctcctcaattt 574

                            
Query: 323 gtgacaaaccttgagaa 339
           || ||||| | ||||||
Sbjct: 575 gtaacaaatcctgagaa 591



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                            
Query: 189      ccatgattgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgt 248
                ||||||| ||||| || |||||||| || || || |||||||| |||||||||||||| |
Sbjct: 35979748 ccatgatcgctgaggctattgacaaggttggccctgatggtgttctttcgatcgagtcat 35979689

                                                            
Query: 249      cttcgtcttttgagactactgttgatgttgaagaaggaatggag 292
                | || ||||||||||| || ||||| ||||||||||||||||||
Sbjct: 35979688 catcatcttttgagaccaccgttgaagttgaagaaggaatggag 35979645



to top

>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete
             sequence
          Length = 164179

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                         
Query: 189   ccatgattgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgt 248
             ||||||| ||||| || |||||||| || || || |||||||| |||||||||||||| |
Sbjct: 41259 ccatgatcgctgaggctattgacaaggttggccctgatggtgttctttcgatcgagtcat 41200

                                                         
Query: 249   cttcgtcttttgagactactgttgatgttgaagaaggaatggag 292
             | || ||||||||||| || ||||| ||||||||||||||||||
Sbjct: 41199 catcatcttttgagaccaccgttgaagttgaagaaggaatggag 41156



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                            
Query: 189      ccatgattgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgt 248
                ||||||| ||||| || |||||||| || || || |||||||| |||||||||||||| |
Sbjct: 36069822 ccatgatcgctgaggctattgacaaggttggccctgatggtgttctttcgatcgagtcat 36069763

                                                            
Query: 249      cttcgtcttttgagactactgttgatgttgaagaaggaatggag 292
                | || ||||||||||| || ||||| ||||||||||||||||||
Sbjct: 36069762 catcatcttttgagaccaccgttgaagttgaagaaggaatggag 36069719



to top

>gb|U21105.1|PSU21105 Pisum sativum alphacpn60 precursor (alphacpn60) mRNA, complete cds;
           nuclear gene for mitochondrial product
          Length = 1977

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 202/255 (79%)
 Strand = Plus / Plus

                                                                       
Query: 136 tgatatcaaagctgttgcctccatctctgctggtaacgatgaacttattggagccatgat 195
           |||||| |||||||||||  | || |||||||| || |||||  | ||||||   |||||
Sbjct: 591 tgatataaaagctgttgctactatttctgctggaaatgatgagttgattggaaaaatgat 650

                                                                       
Query: 196 tgctgatgccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtc 255
           |||||| || |||||||| || || || ||||||||  | || || ||||| |||   ||
Sbjct: 651 tgctgaagcgattgacaaggttggacccgatggtgttttatccattgagtcttctaactc 710

                                                                       
Query: 256 ttttgagactactgttgatgttgaagaaggaatggagattgaccgtggctacatttcccc 315
            |||||||| || ||||| |||||||||||||||||||||||| | || || || |||||
Sbjct: 711 gtttgagacgacagttgaagttgaagaaggaatggagattgacagaggatatatctcccc 770

                                                                       
Query: 316 tcaattcgtgacaaaccttgagaaatcgattgtggagtttgagaatgctagagttcttat 375
           ||| || || ||||| |  |||||||| ||||| || |||||||| || |||||  | ||
Sbjct: 771 tcagtttgtaacaaatccagagaaatcaattgttgaatttgagaacgccagagtcttgat 830

                          
Query: 376 aactgatcagaagat 390
            || |||||||||||
Sbjct: 831 taccgatcagaagat 845



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 473 actggtgaagctttggcgactcttgttgttaacaagct 510
           |||||||| ||||||||||| |||||||| || |||||
Sbjct: 928 actggtgaggctttggcgacccttgttgtcaataagct 965



to top

>dbj|AB049590.1| Avicennia marina chpa mRNA for chaperonin-60 alpha subunit,
           complete cds
          Length = 2059

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 225/287 (78%)
 Strand = Plus / Plus

                                                                       
Query: 83  cagggtctgattgaagagcttgaaagaaaagctagaccagtcaagggcagtggtgatatc 142
           ||||| |||||||| |||||||||| ||| || || ||  |||||||  | |  ||||||
Sbjct: 589 cagggactgattgaggagcttgaaaaaaatgccaggcctatcaagggtggagaagatatc 648

                                                                       
Query: 143 aaagctgttgcctccatctctgctggtaacgatgaacttattggagccatgattgctgat 202
           |||||  ||||||| ||||| ||||| || |||||    ||||| |  |||||||| |||
Sbjct: 649 aaagccattgcctcgatctccgctgggaatgatgatagcattggtgaaatgattgccgat 708

                                                                       
Query: 203 gccattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgag 262
           ||  || |||| || || || || |||||| | || || ||||| || || || ||||||
Sbjct: 709 gcagttaacaaggttggccctgacggtgtcttatccattgagtcatcatcatcctttgag 768

                                                                       
Query: 263 actactgttgatgttgaagaaggaatggagattgaccgtggctacatttcccctcaattc 322
           |||||||||||||| ||||||||||||||||||||  | || || || ||||||||||| 
Sbjct: 769 actactgttgatgtagaagaaggaatggagattgatagaggatatatctcccctcaattt 828

                                                          
Query: 323 gtgacaaaccttgagaaatcgattgtggagtttgagaatgctagagt 369
            | || |||| ||| ||   |||||| || ||||||||||| |||||
Sbjct: 829 attaccaaccctgaaaagatgattgttgaatttgagaatgcaagagt 875



to top

>gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map mi54, complete
             sequence
          Length = 94884

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 120/148 (81%)
 Strand = Plus / Minus

                                                                         
Query: 145   agctgttgcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgc 204
             |||||| || || ||||||||||| || ||||| ||||| ||  | ||||||||||||||
Sbjct: 33281 agctgtggcttctatctctgctggaaatgatgaccttatagggtcaatgattgctgatgc 33222

                                                                         
Query: 205   cattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagac 264
             ||| |||||||| || || ||||||||  | || || || || || || |||||||||||
Sbjct: 33221 catcgacaaagttggacctgatggtgttttgtccattgaatcttcatcttcttttgagac 33162

                                         
Query: 265   tactgttgatgttgaagaaggaatggag 292
              || || || ||||||||||| ||||||
Sbjct: 33161 cacggtcgaagttgaagaagggatggag 33134



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 350   gagtttgagaatgctagagttcttataactgatcagaagatcac 393
             ||||||||||||||||| ||  | || |||||||||||||||||
Sbjct: 32994 gagtttgagaatgctagggtattgatcactgatcagaagatcac 32951



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                         
Query: 32    acttctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggtctg 91
             ||||||||||| || || || ||||| ||||  ||||| || || ||||| || ||||||
Sbjct: 33479 acttctggtgcgaatcccgtttcactcaagaggggaattgataagactgttcaaggtctg 33420

                         
Query: 92    attgaagagctt 103
             || |||||||||
Sbjct: 33419 atcgaagagctt 33408



to top

>gb|U49357.1|ATU49357 Arabidopsis thaliana chaperonin-60 alpha subunit gene, nuclear gene
            encoding plastid protein, complete cds
          Length = 4365

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 120/148 (81%)
 Strand = Plus / Plus

                                                                        
Query: 145  agctgttgcctccatctctgctggtaacgatgaacttattggagccatgattgctgatgc 204
            |||||| || || ||||||||||| || ||||| ||||| ||  | ||||||||||||||
Sbjct: 1792 agctgtggcttctatctctgctggaaatgatgaccttatagggtcaatgattgctgatgc 1851

                                                                        
Query: 205  cattgacaaagtgggtccagatggtgtcctttcgatcgagtcgtcttcgtcttttgagac 264
            ||| |||||||| || || ||||||||  | || || || || || || |||||||||||
Sbjct: 1852 catcgacaaagttggacctgatggtgttttgtccattgaatcttcatcttcttttgagac 1911

                                        
Query: 265  tactgttgatgttgaagaaggaatggag 292
             || || || ||||||||||| ||||||
Sbjct: 1912 cacggtcgaagttgaagaagggatggag 1939



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 350  gagtttgagaatgctagagttcttataactgatcagaagatcac 393
            ||||||||||||||||| ||  | || |||||||||||||||||
Sbjct: 2079 gagtttgagaatgctagggtattgatcactgatcagaagatcac 2122



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                        
Query: 32   acttctggtgcaaaccctgtatcactaaagaaaggaatcgacaaaactgtccagggtctg 91
            ||||||||||| || || || ||||| ||||  ||||| || || ||||| || ||||||
Sbjct: 1594 acttctggtgcgaatcccgtttcactcaagaggggaattgataagactgttcaaggtctg 1653

                        
Query: 92   attgaagagctt 103
            || |||||||||
Sbjct: 1654 atcgaagagctt 1665



to top

>dbj|AK061410.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-B08, full
           insert sequence
          Length = 1087

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                       
Query: 506 aagctcagaggtattattaacgttgcggcgatcaaagccccaagtttcggtgagcggcgg 565
           |||||| |||| ||| | || ||||| || ||||||||||||||||| |||||||| || 
Sbjct: 5   aagctccgaggaattctcaatgttgcagcaatcaaagccccaagttttggtgagcgacgc 64

                           
Query: 566 aaggctgtccttcagg 581
           ||||||||||||||||
Sbjct: 65  aaggctgtccttcagg 80



to top

>emb|BX819680.1|CNS0A9ZT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS16ZF10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2019

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 77/92 (83%)
 Strand = Plus / Plus

                                                                       
Query: 140 atcaaagctgttgcctccatctctgctggtaacgatgaacttattggagccatgattgct 199
           |||| |||||| || || ||||||||||| || ||||| ||||| ||  | |||||||||
Sbjct: 629 atcagagctgtggcttctatctctgctggaaatgatgaccttatagggtcaatgattgct 688

                                           
Query: 200 gatgccattgacaaagtgggtccagatggtgt 231
           |||||||| |||||||| || || ||||||||
Sbjct: 689 gatgccatcgacaaagttggacctgatggtgt 720



to top

>ref|NM_179480.1| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding /
            protein binding AT1G55490 (CPN60B) transcript variant
            AT1G55490.2 mRNA, complete cds
          Length = 2060

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                    
Query: 479  gaagctttggcgactcttgttgttaacaagctcagaggta 518
            |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 1034 gaagctttagcgactcttgttgtaaacaagcttagaggta 1073



to top

>ref|NM_104424.2| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding /
            protein binding AT1G55490 (CPN60B) transcript variant
            AT1G55490.1 mRNA, complete cds
          Length = 2087

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                    
Query: 479  gaagctttggcgactcttgttgttaacaagctcagaggta 518
            |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 1061 gaagctttagcgactcttgttgtaaacaagcttagaggta 1100



to top

>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence
          Length = 87967

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 479   gaagctttggcgactcttgttgttaacaagctcagaggta 518
             |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 53651 gaagctttagcgactcttgttgtaaacaagcttagaggta 53690



to top

>gb|AY081501.1| Arabidopsis thaliana Rubisco subunit binding-protein beta subunit
           (At1g55490) mRNA, complete cds
          Length = 1844

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 479 gaagctttggcgactcttgttgttaacaagctcagaggta 518
           |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 931 gaagctttagcgactcttgttgtaaacaagcttagaggta 970



to top

>gb|AF386945.1|AF386945 Arabidopsis thaliana Rubisco subunit binding-protein beta subunit
            (T5A14.11) mRNA, complete cds
          Length = 2060

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                    
Query: 479  gaagctttggcgactcttgttgttaacaagctcagaggta 518
            |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 1053 gaagctttagcgactcttgttgtaaacaagcttagaggta 1092



to top

>emb|BX814891.1|CNS0ADZ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS16ZG05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2000

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                    
Query: 479  gaagctttggcgactcttgttgttaacaagctcagaggta 518
            |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 1016 gaagctttagcgactcttgttgtaaacaagcttagaggta 1055



to top

>ref|NM_121887.1| Arabidopsis thaliana EMB3007; ATP binding / protein binding
           AT5G18820 (EMB3007) mRNA, complete cds
          Length = 1728

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 136 tgatatcaaagctgttgcctccatctctgctggtaacgatgaa 178
           |||||| |||||||| || || |||||||||||||||||||||
Sbjct: 519 tgatattaaagctgtggcttcaatctctgctggtaacgatgaa 561



to top

>dbj|AK221565.1| Arabidopsis thaliana mRNA for chaperonin 60 alpha chain - like
           protein, complete cds, clone: RAFL07-81-D11
          Length = 1960

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 136 tgatatcaaagctgttgcctccatctctgctggtaacgatgaa 178
           |||||| |||||||| || || |||||||||||||||||||||
Sbjct: 567 tgatattaaagctgtggcttcaatctctgctggtaacgatgaa 609



to top

>gb|AF014832.1|AF014832 Bartonella doshiae 60 kDa heat shock protein (groEL) gene, partial
           cds
          Length = 1461

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 476 ggtgaagctttggcgactcttgttgttaacaagct 510
           |||||||||||||| || |||||||||||||||||
Sbjct: 667 ggtgaagctttggcaacacttgttgttaacaagct 701



to top

>gb|U46136.1|STU46136 Solanum tuberosum chaperonin-60 beta subunit mRNA, nuclear gene
            encoding chloroplast protein, complete cds
          Length = 2078

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 479  gaagctttggcgactcttgttgttaacaagctcagaggt 517
            ||||||||||||||||||||||| || ||||| ||||||
Sbjct: 965  gaagctttggcgactcttgttgtcaataagcttagaggt 1003



to top

>gb|AY940083.1| Zymomonas mobilis subsp. francensis strain AN0101 heat shock
           protein Hsp60 (groEL) gene, partial cds
          Length = 592

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 479 gaagctttggcgactcttgttgttaacaagctc 511
           ||||||||||| ||||| |||||||||||||||
Sbjct: 523 gaagctttggcaactctggttgttaacaagctc 555



to top

>gb|AY360225.1| Streptococcus sinensis strain HKU6 chaperonin GroEL (groEL) gene,
           partial cds
          Length = 1471

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 272 gatgttgaagaaggaatggagattgaccgtggctac 307
           ||||||| |||||||||| || ||||||||||||||
Sbjct: 508 gatgttgtagaaggaatgcagtttgaccgtggctac 543



to top

>gb|AY360224.1| Streptococcus sinensis strain HKU5 chaperonin GroEL (groEL) gene,
           partial cds
          Length = 1472

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 272 gatgttgaagaaggaatggagattgaccgtggctac 307
           ||||||| |||||||||| || ||||||||||||||
Sbjct: 508 gatgttgtagaaggaatgcagtttgaccgtggctac 543



to top

>gb|AY360223.1| Streptococcus sinensis strain HKU4 chaperonin GroEL (groEL) gene,
           partial cds
          Length = 1454

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 272 gatgttgaagaaggaatggagattgaccgtggctac 307
           ||||||| |||||||||| || ||||||||||||||
Sbjct: 509 gatgttgtagaaggaatgcagtttgaccgtggctac 544



to top

>gb|AY344499.1| Streptococcus gordonii chaperonin GroEL-like gene, partial sequence
          Length = 1436

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 272 gatgttgaagaaggaatggagattgaccgtggctac 307
           ||||||| |||||||||| || ||||||||||||||
Sbjct: 490 gatgttgtagaaggaatgcagtttgaccgtggctac 525



to top

>gb|AF338228.1| Streptococcus gordonii ABC transporter, GroES, and GroEL genes,
            complete cds
          Length = 3666

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 272  gatgttgaagaaggaatggagattgaccgtggctac 307
            ||||||| |||||||||| || ||||||||||||||
Sbjct: 1975 gatgttgtagaaggaatgcagtttgaccgtggctac 2010



to top

>dbj|AK222126.1| Arabidopsis thaliana mRNA for putative rubisco subunit
           binding-protein alpha subunit, partial cds, clone:
           RAFL22-94-G01
          Length = 1181

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 350 gagtttgagaatgctagagttcttataactgatcagaagatcac 393
           ||||||||||||||||| ||  | || |||||||||||||||||
Sbjct: 13  gagtttgagaatgctagggtattgatcactgatcagaagatcac 56



to top

>gb|AY123738.1| Streptococcus gordonii strain ATCC 10558 Cpn60 (cpn60) gene,
           partial cds
          Length = 552

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 272 gatgttgaagaaggaatggagattgaccgtggctac 307
           ||||||| |||||||||| || ||||||||||||||
Sbjct: 286 gatgttgtagaaggaatgcagtttgaccgtggctac 321



to top

>gb|AF449763.1| Bartonella sp. SV06uk heat shock protein Hsp 60 (groEL) gene,
           partial cds
          Length = 1206

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 476 ggtgaagctttggcgactcttgttgttaacaa 507
           ||||||||||||||||| || |||||||||||
Sbjct: 502 ggtgaagctttggcgacgctcgttgttaacaa 533



to top

>ref|NM_125033.3| Arabidopsis thaliana ATP binding / protein binding AT5G56500
            transcript variant AT5G56500.1 mRNA, complete cds
          Length = 2315

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 488  gcgactcttgttgttaacaagct 510
            |||||||||||||||||||||||
Sbjct: 1019 gcgactcttgttgttaacaagct 1041



to top

>ref|NM_001037006.1| Arabidopsis thaliana ATP binding / protein binding AT5G56500
            transcript variant AT5G56500.2 mRNA, complete cds
          Length = 2355

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 488  gcgactcttgttgttaacaagct 510
            |||||||||||||||||||||||
Sbjct: 1059 gcgactcttgttgttaacaagct 1081



to top

>emb|BX831822.1|CNS09YNB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH31ZC11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1462

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 488 gcgactcttgttgttaacaagct 510
           |||||||||||||||||||||||
Sbjct: 413 gcgactcttgttgttaacaagct 435



to top

>dbj|AB019234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKN22
          Length = 27229

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 488 gcgactcttgttgttaacaagct 510
           |||||||||||||||||||||||
Sbjct: 847 gcgactcttgttgttaacaagct 869



to top

>gb|AF054630.1|AF054630 Oscillatoria sp. NKBG091600 GroES gene, complete cds; and GroEL gene,
            partial cds
          Length = 1767

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 156  ccatctctgctggtaacgatgaa 178
            |||||||||||||||||||||||
Sbjct: 1152 ccatctctgctggtaacgatgaa 1174



to top

>gb|M35600.1|BNA60CPNB B.napus plastid 60-kDa chaperonin-60 beta-polypeptide (cpn-60 beta)
            mRNA, partial cds
          Length = 1982

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 482  gctttggcgactcttgttgttaacaagctcagagg 516
            ||||| ||||| ||||||||||||||||| |||||
Sbjct: 997  gctttagcgacccttgttgttaacaagcttagagg 1031



to top

>ref|NM_112193.1| Arabidopsis thaliana ATP binding / protein binding AT3G13470 mRNA,
           complete cds
          Length = 1922

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 491 actcttgttgttaacaagctcagagg 516
           |||||||||||||||||||| |||||
Sbjct: 931 actcttgttgttaacaagcttagagg 956



to top

>gb|DQ106180.1| Uncultured bacterium clone ce1_cl37_cn1 60 kDa chaperonin (cpn60)
           gene, partial cds
          Length = 552

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 479 gaagctttggcgactcttgttgttaacaagctcagagg 516
           ||||||||| | |||||| ||||||| |||||||||||
Sbjct: 493 gaagctttgtcaactcttattgttaataagctcagagg 530



to top

>dbj|AK055769.1| Homo sapiens cDNA FLJ31207 fis, clone KIDNE2003357
          Length = 2103

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 186  gagccatgattgctgatgccattgacaaag 215
            ||||||||||| ||||||| ||||||||||
Sbjct: 2007 gagccatgattactgatgcaattgacaaag 1978



to top

>gb|AC114956.2| Homo sapiens chromosome 5 clone RP11-159F24, complete sequence
          Length = 104726

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 186   gagccatgattgctgatgccattgacaaag 215
             ||||||||||| ||||||| ||||||||||
Sbjct: 99256 gagccatgattactgatgcaattgacaaag 99285



to top

>gb|AC010435.6| Homo sapiens chromosome 5 clone CTD-2210P15, complete sequence
          Length = 149207

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 186  gagccatgattgctgatgccattgacaaag 215
            ||||||||||| ||||||| ||||||||||
Sbjct: 2772 gagccatgattactgatgcaattgacaaag 2801



to top

>gb|AC068655.3|AC068655 Genomic Sequence For Arabidopsis thaliana Clone F17K4 From Chromosome
             V, complete sequence
          Length = 89453

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 145   agctgttgcctccatctctgctggtaacgatgaa 178
             |||||| || || |||||||||||||||||||||
Sbjct: 63802 agctgtggcttcaatctctgctggtaacgatgaa 63769



to top

>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 183     ttggagccatgattgctgatgccattgacaaagt 216
               |||| ||||||||||| |||||||| ||||||||
Sbjct: 2540192 ttggggccatgattgccgatgccatggacaaagt 2540159



to top

>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15
          Length = 83287

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 491   actcttgttgttaacaagctcagagg 516
             |||||||||||||||||||| |||||
Sbjct: 44956 actcttgttgttaacaagcttagagg 44981



to top

>dbj|AK074454.1| Homo sapiens cDNA FLJ23874 fis, clone LNG12957
          Length = 2235

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 186 gagccatgattgctgatgccattgacaaag 215
           ||||||||||| ||||||| ||||||||||
Sbjct: 532 gagccatgattactgatgcaattgacaaag 503



to top

>gb|M57517.1|SYCCPN60 Synechocystis sp. chaperonin 60 (cpn60) gene, complete cds
          Length = 4688

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 183  ttggagccatgattgctgatgccattgacaaagt 216
            |||| ||||||||||| |||||||| ||||||||
Sbjct: 2243 ttggggccatgattgccgatgccatggacaaagt 2276



to top

>gb|AY691264.1| Lactobacillus intestinalis 60 kDa chaperonin (cpn60) gene,
          partial cds
          Length = 552

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 28 cgtaacttctggtgcaaaccctgta 52
          ||||||| |||||||||||||||||
Sbjct: 45 cgtaactgctggtgcaaaccctgta 69



to top

>ref|XM_756651.1| Ustilago maydis 521 hypothetical protein (UM05597.1) partial mRNA
          Length = 2997

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 88  tctgattgaagagcttgaaag 108
           |||||||||||||||||||||
Sbjct: 649 tctgattgaagagcttgaaag 629



to top

>emb|AL033534.1|SPBC215 S.pombe chromosome II cosmid c215
          Length = 37777

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 87   gtctgattgaagagcttgaaagaaa 111
            |||||||| ||||||||||||||||
Sbjct: 4508 gtctgattcaagagcttgaaagaaa 4484



to top

>gb|AF304018.1| Bartonella tribocorum heat shock protein Hsp60 (groEL) gene,
           partial cds
          Length = 1268

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 191 atgattgctgatgccattgacaaagtggg 219
           ||||||||||||||||| || ||||||||
Sbjct: 232 atgattgctgatgccatggaaaaagtggg 260



to top

>ref|NM_001022603.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC215.03c),
           partial mRNA
          Length = 1269

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 87  gtctgattgaagagcttgaaagaaa 111
           |||||||| ||||||||||||||||
Sbjct: 728 gtctgattcaagagcttgaaagaaa 752



to top

>gb|AY224481.1| Oryza sativa (japonica cultivar-group) isolate 29884 putative
           chaperonin 60 alpha subunit mRNA, partial cds
          Length = 673

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 125 aagggcagtggtgatatcaaagctg 149
           ||||||||||||||||| |||||||
Sbjct: 598 aagggcagtggtgatattaaagctg 622



to top

>gb|AF239164.1| Rhizobium leguminosarum cpn-3 (groE) operon, complete sequence
          Length = 2947

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 486  tggcgactcttgttgttaacaagct 510
            ||||||| |||||||||||||||||
Sbjct: 2055 tggcgacgcttgttgttaacaagct 2079



to top

>gb|AF314169.1|AF314169 Schizosaccharomyces pombe signalosome subunit Csn1 gene, complete cds
          Length = 3297

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 87   gtctgattgaagagcttgaaagaaa 111
            |||||||| ||||||||||||||||
Sbjct: 1497 gtctgattcaagagcttgaaagaaa 1521



to top

>gb|AC016182.24| Homo sapiens chromosome 17, clone RP11-559N14, complete sequence
          Length = 181971

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 142    caaagctgttgcctccatctctgct 166
              |||||||||| ||||||||||||||
Sbjct: 132280 caaagctgttccctccatctctgct 132304



to top

>gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-138b18, complete
             sequence
          Length = 128810

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 338   aaatcgattgtggagtttgagaatgctagagttcttataactgatcagaagat 390
             ||||| ||||| |||||||| ||||||| |||| |  |||| |||||||||||
Sbjct: 65997 aaatccattgtagagtttgacaatgctaaagttttggtaacggatcagaagat 66049



to top

>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     cgtaacttctggtgcaaaccc 48
              |||||||||||||||||||||
Sbjct: 690531 cgtaacttctggtgcaaaccc 690551



to top

>gb|AF014835.1|AF014835 Bartonella vinsonii 60 kDa heat shock protein (groEL) gene, partial
           cds
          Length = 1206

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 476 ggtgaagctttggcgactcttgttgttaacaag 508
           |||||||||||||| || || ||||||||||||
Sbjct: 502 ggtgaagctttggcaacgctcgttgttaacaag 534



to top

>gb|AY691258.1| Faecalibacterium prausnitzii 60 kDa chaperonin (cpn60) gene,
           partial cds
          Length = 555

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 281 gaaggaatggagattgaccgtggctacatttcccctcaattcgtgacaaacc 332
           ||||| ||| || |||||||||||||| | |||||| | |||||||| ||||
Sbjct: 298 gaaggcatgcagtttgaccgtggctacctctccccttacttcgtgaccaacc 349



to top

>gb|AY515128.1| Bartonella rattimassiliensis strain 16115 GroEL gene, partial cds
          Length = 1461

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 476 ggtgaagctttggcgactcttgttgttaacaa 507
           |||||||||||||| || ||||| ||||||||
Sbjct: 587 ggtgaagctttggcaacgcttgtggttaacaa 618



to top

>gb|AY515127.1| Bartonella rattimassiliensis strain 15908 GroEL gene, partial cds
          Length = 1448

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 476 ggtgaagctttggcgactcttgttgttaacaa 507
           |||||||||||||| || ||||| ||||||||
Sbjct: 587 ggtgaagctttggcaacgcttgtggttaacaa 618



to top

>gb|AF437115.1| Uncultured pig faeces bacterium clone 010_G02 60 kDa chaperonin
           (cpn60) gene, partial cds
          Length = 558

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 281 gaaggaatggagattgaccgtggctacatttc 312
           ||||| ||| || |||||||||||||||||||
Sbjct: 301 gaaggtatgcagtttgaccgtggctacatttc 332



to top

>gb|AF441380.1| Bacillus firmus 60 kDa chaperonin (cpn60) gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 377 actgatcagaagatcacaagcataaaggaaat 408
           |||||| ||||||||||||||||  |||||||
Sbjct: 391 actgataagaagatcacaagcatccaggaaat 422



to top

>gb|AF352802.1| Streptococcus cristatus ATCC51100 60 kDa chaperonin (cpn60) gene,
           partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 280 agaaggaatggagattgaccgtggctac 307
           |||||||||| || ||||||||||||||
Sbjct: 294 agaaggaatgcagtttgaccgtggctac 321



to top

>gb|AC010212.10| Drosophila melanogaster clone BACR32D05, complete sequence
          Length = 161579

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     attgaagagcttgaaagaaaagct 115
              ||||||||||| ||||||||||||
Sbjct: 130993 attgaagagctggaaagaaaagct 131016



to top

>gb|AC163769.4| Pan troglodytes BAC clone CH251-59O12 from chromosome unknown, complete
              sequence
          Length = 185010

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    ctgttgcctccatctctgct 166
              ||||||||||||||||||||
Sbjct: 131692 ctgttgcctccatctctgct 131711



to top

>gb|DQ106298.1| Uncultured bacterium clone ic0_cl13_cn1 60 kDa chaperonin (cpn60)
           gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 461 gccgaggacattactggtgaagct 484
           ||||| ||||||||||||||||||
Sbjct: 475 gccgatgacattactggtgaagct 498



to top

>gb|DQ106229.1| Uncultured bacterium clone dl0_cl11_cn1 60 kDa chaperonin (cpn60)
           gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 461 gccgaggacattactggtgaagct 484
           ||||| ||||||||||||||||||
Sbjct: 475 gccgatgacattactggtgaagct 498



to top

>gb|DQ106200.1| Uncultured bacterium clone ce1_cl52_cn1 60 kDa chaperonin (cpn60)
           gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 461 gccgaggacattactggtgaagct 484
           ||||| ||||||||||||||||||
Sbjct: 475 gccgatgacattactggtgaagct 498



to top

>gb|DQ106087.1| Uncultured bacterium clone ce0_cl38_cn1 60 kDa chaperonin (cpn60)
           gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 461 gccgaggacattactggtgaagct 484
           ||||| ||||||||||||||||||
Sbjct: 475 gccgatgacattactggtgaagct 498



to top

>gb|AC125053.4| Mus musculus BAC clone RP23-389L19 from chromosome 18, complete
             sequence
          Length = 189741

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   gggcagtggtgatatcaaag 146
             ||||||||||||||||||||
Sbjct: 80466 gggcagtggtgatatcaaag 80447



to top

>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence
          Length = 133324

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 281    gaaggaatggagattgaccgtggctacatttc 312
              ||||||||| || ||||||| |||||||||||
Sbjct: 126124 gaaggaatgaagcttgaccgaggctacatttc 126093



to top

>gb|AY116641.1| Bartonella koehlerae heat shock protein Hsp60 (groEL) gene, partial
           cds
          Length = 1188

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 476 ggtgaagctttggcgactcttgttgttaacaagctc 511
           |||||||||||||| || || ||||| |||||||||
Sbjct: 485 ggtgaagctttggcaacgctcgttgtcaacaagctc 520



to top

>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 403     ggaaatcattccacttctgg 422
               ||||||||||||||||||||
Sbjct: 3843123 ggaaatcattccacttctgg 3843142



to top

>emb|AL691491.11| Mouse DNA sequence from clone RP23-426J14 on chromosome 4 Contains the 5'
              end of the Pappa gene for pregnancy-associated plasma
              protein A and a Cpg island, complete sequence
          Length = 199017

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    ggctacatttcccctcaatt 321
              ||||||||||||||||||||
Sbjct: 143476 ggctacatttcccctcaatt 143457



to top

>gb|AC022017.8| Homo sapiens chromosome 10 clone RP11-210G22, complete sequence
          Length = 180165

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   attgctgatgccattgacaa 213
             ||||||||||||||||||||
Sbjct: 35638 attgctgatgccattgacaa 35619



to top

>gb|AC110990.3| Homo sapiens 3 BAC RP11-17A18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 55000

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 182   attggagccatgattgctgatgcc 205
             |||||||||||||||||| |||||
Sbjct: 10737 attggagccatgattgctaatgcc 10714



to top

>gb|AC009811.14| Homo sapiens chromosome 3, clone RP11-491K7, complete sequence
          Length = 171083

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 182   attggagccatgattgctgatgcc 205
             |||||||||||||||||| |||||
Sbjct: 28037 attggagccatgattgctaatgcc 28060



to top

>gb|AF304016.1| Bartonella vinsonii subsp. arupensis heat shock protein Hsp60
           (groEL) gene, partial cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 476 ggtgaagctttggcgactcttgttgttaacaa 507
           |||||||||||||| || || |||||||||||
Sbjct: 580 ggtgaagctttggcaacactcgttgttaacaa 611



to top

>gb|AE008558.1|AE008558 Streptococcus pneumoniae R6 section 174 of 184 of the complete genome
          Length = 10274

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 268  tgttgatgttgaagaaggaa 287
            ||||||||||||||||||||
Sbjct: 9320 tgttgatgttgaagaaggaa 9301



to top

>gb|AC157943.2| Mus musculus BAC clone RP23-467N13 from chromosome 18, complete
            sequence
          Length = 186362

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  gggcagtggtgatatcaaag 146
            ||||||||||||||||||||
Sbjct: 2809 gggcagtggtgatatcaaag 2828



to top

>gb|AY123651.1| Lactobacillus vaginalis strain ATCC 49540 Cpn60 (cpn60) gene,
           partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 461 gccgaggacattactggtgaagct 484
           ||||| ||||||||||||||||||
Sbjct: 475 gccgatgacattactggtgaagct 498



to top

>gb|AY332863.1| Yersinia bercovieri strain WS 39/98 60 kDa heat shock protein
           (HSP60) gene, partial cds
          Length = 517

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 479 gaagctttggcgactcttgttgttaaca 506
           ||||| ||||||||||| ||||||||||
Sbjct: 203 gaagcgttggcgactctggttgttaaca 230



to top

>gb|AY332862.1| Yersinia bercovieri strain WS 27/96 60 kDa heat shock protein
           (HSP60) gene, partial cds
          Length = 498

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 479 gaagctttggcgactcttgttgttaaca 506
           ||||| ||||||||||| ||||||||||
Sbjct: 184 gaagcgttggcgactctggttgttaaca 211



to top

>gb|AY332861.1| Yersinia bercovieri strain WS 19/96 60 kDa heat shock protein
           (HSP60) gene, partial cds
          Length = 557

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 479 gaagctttggcgactcttgttgttaaca 506
           ||||| ||||||||||| ||||||||||
Sbjct: 183 gaagcgttggcgactctggttgttaaca 210



to top

>gb|AY332860.1| Yersinia bercovieri strain WE 82/87 60 kDa heat shock protein
           (HSP60) gene, partial cds
          Length = 495

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 479 gaagctttggcgactcttgttgttaaca 506
           ||||| ||||||||||| ||||||||||
Sbjct: 195 gaagcgttggcgactctggttgttaaca 222



to top

>gb|AY332859.1| Yersinia bercovieri strain WA 17/96 60 kDa heat shock protein
           (HSP60) gene, partial cds
          Length = 528

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 479 gaagctttggcgactcttgttgttaaca 506
           ||||| ||||||||||| ||||||||||
Sbjct: 202 gaagcgttggcgactctggttgttaaca 229



to top

>gb|AY332858.1| Yersinia bercovieri strain ATCC 43970 60 kDa heat shock protein
           (HSP60) gene, partial cds
          Length = 513

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 479 gaagctttggcgactcttgttgttaaca 506
           ||||| ||||||||||| ||||||||||
Sbjct: 180 gaagcgttggcgactctggttgttaaca 207



to top

>gb|AY332857.1| Yersinia bercovieri strain 6519 60 kDa heat shock protein (HSP60)
           gene, partial cds
          Length = 426

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 479 gaagctttggcgactcttgttgttaaca 506
           ||||| ||||||||||| ||||||||||
Sbjct: 194 gaagcgttggcgactctggttgttaaca 221



to top

>gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141J21 containing NRXN2 (NRXN2)
             gene, partial cds; and RST and OAT4 genes, complete cds,
             complete sequence
          Length = 170114

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   ctgttgcctccatctctgct 166
             ||||||||||||||||||||
Sbjct: 46290 ctgttgcctccatctctgct 46309



to top

>gb|AC000134.14| Homo sapiens Chromosome 11q13 BAC Clone 137c7, complete sequence
          Length = 203300

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   ctgttgcctccatctctgct 166
             ||||||||||||||||||||
Sbjct: 23299 ctgttgcctccatctctgct 23280



to top

>gb|AY837291.1| Vibrio sp. 12F04 heat shock protein 60 (hsp60) gene, partial cds
          Length = 541

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 476 ggtgaagctttggcgactcttgttgttaacaa 507
           |||||||| ||||||||||| ||||| |||||
Sbjct: 501 ggtgaagcgttggcgactctggttgtgaacaa 532



to top

>ref|XM_397192.2| PREDICTED: Apis mellifera similar to ENSANGP00000010721 (LOC413753),
            mRNA
          Length = 6921

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  tactgttgatgttgaagaag 284
            ||||||||||||||||||||
Sbjct: 1698 tactgttgatgttgaagaag 1717



to top

>gb|AF230949.1| Vibrio mimicus strain 85450 HSP60 gene, partial cds
          Length = 555

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 272 gatgttgaagaaggaatggagattgaccgtggctac 307
           ||||||| |||||| ||| || ||||||||||||||
Sbjct: 289 gatgttgtagaaggtatgcagtttgaccgtggctac 324



to top

>gb|AF230948.1| Vibrio mimicus strain ATCC33653 HSP60 gene, partial cds
          Length = 556

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 272 gatgttgaagaaggaatggagattgaccgtggctac 307
           ||||||| |||||| ||| || ||||||||||||||
Sbjct: 290 gatgttgtagaaggtatgcagtttgaccgtggctac 325



to top

>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 268     tgttgatgttgaagaaggaa 287
               ||||||||||||||||||||
Sbjct: 2047805 tgttgatgttgaagaaggaa 2047786



to top

>gb|AC008001.1|AC008001 Drosophila melanogaster, chromosome 3R, region 83E7-83F2, P1 clones
              DS04679 and DS07437, complete sequence
          Length = 130149

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 92     attgaagagcttgaaagaaaagct 115
              ||||||||||| ||||||||||||
Sbjct: 125218 attgaagagctggaaagaaaagct 125195



to top

>gb|AY940082.1| Zymomonas mobilis subsp. pomaceae strain LMG 5993 heat shock
           protein Hsp60 (groEL) gene, partial cds
          Length = 592

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 476 ggtgaagctttggcgactcttgttgttaacaa 507
           |||||||||||||| || || |||||||||||
Sbjct: 520 ggtgaagctttggcaaccctcgttgttaacaa 551



to top

>gb|AY940081.1| Zymomonas mobilis subsp. pomaceae strain LMG 448 heat shock protein
           Hsp60 (groEL) gene, partial cds
          Length = 592

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 476 ggtgaagctttggcgactcttgttgttaacaa 507
           |||||||||||||| || || |||||||||||
Sbjct: 520 ggtgaagctttggcaaccctcgttgttaacaa 551



to top

>gb|AE003674.3| Drosophila melanogaster chromosome 3R, section 10 of 118 of the
             complete sequence
          Length = 298020

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 92    attgaagagcttgaaagaaaagct 115
             ||||||||||| ||||||||||||
Sbjct: 23564 attgaagagctggaaagaaaagct 23587



to top

>gb|AF405420.1| Pediococcus inopinatus clone P37 HSP60 gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 461 gccgaggacattactggtgaagctttggcgactcttgttgttaacaag 508
           ||||| || |||||||||||||||||| | || |||||| | ||||||
Sbjct: 475 gccgatgatattactggtgaagctttgccaacccttgttttgaacaag 522



to top

>dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727K3, complete
              sequence
          Length = 160739

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    ctgttgcctccatctctgct 166
              ||||||||||||||||||||
Sbjct: 114639 ctgttgcctccatctctgct 114620



to top

>dbj|AP006288.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-128H22, complete
              sequence
          Length = 169259

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    ctgttgcctccatctctgct 166
              ||||||||||||||||||||
Sbjct: 153794 ctgttgcctccatctctgct 153775



to top

>gb|AF429661.1| Lactobacillus plantarum strain ATCC 8014 60 kDa heat shock protein
           (HSP60) gene, partial cds
          Length = 552

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 467 gacattactggtgaagcttt 486
           ||||||||||||||||||||
Sbjct: 481 gacattactggtgaagcttt 500


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,130,988
Number of Sequences: 3902068
Number of extensions: 5130988
Number of successful extensions: 86152
Number of sequences better than 10.0: 133
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85761
Number of HSP's gapped (non-prelim): 361
length of query: 581
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 558
effective length of database: 17,143,297,704
effective search space: 9565960118832
effective search space used: 9565960118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top