ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags23k11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MFP1_TOBAC (Q9M7J4) MAR binding filament-like protein 1-1 33 1.2

>MFP1_TOBAC (Q9M7J4) MAR binding filament-like protein 1-1|
          Length = 722

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
 Frame = -2

Query: 662 QGKKDLCRTLQPDV--YTR*KLSKELTFPPLKNK*KDCRCVVHTIASRRGPTILTAARLR 489
           Q K++L R L  ++   ++ KL  ++T   L+    D   +   +   R       A + 
Sbjct: 408 QEKENLRRMLDAELENISKLKLEVQVTQETLEKSRSDASDIAQQLQQSRHLCSKLEAEVS 467

Query: 488 AYSMEIEKPKISYFRKVDDTKRNA*ATHAVLTS 390
              ME+E+ + S  R +D+TKR A    A LT+
Sbjct: 468 KLQMELEETRTSLRRNIDETKRGAELLAAELTT 500


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,198,633
Number of Sequences: 219361
Number of extensions: 2041151
Number of successful extensions: 4709
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4709
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7706249192
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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