ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags23h01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ019624.1| Triticum aestivum pre-mRNA processing factor (Luc7) mRNA, complete cds Length = 1662 Score = 971 bits (490), Expect = 0.0 Identities = 541/558 (96%) Strand = Plus / Plus Query: 65 ggcggcggccgccatggacgcgatgcggaagcagctggacgtgctcatgggggccaaccg 124 |||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 120 ggcgccggcggccatggacgcgatgcggaagcagctggacgtgctgatgggggccaaccg 179 Query: 125 caacggcgacgtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctctt 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 caacggcgacgtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctctt 239 Query: 185 cctcgccggcctctgcccccacgacctcttccagctcacgaaaatggatctcggaccgtg 244 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 240 cctcgccggcctctgcccccacgacctcttccagctcacgaaaatggatctcggaccctg 299 Query: 245 ccccaaggtccactcgctgcagctgcggaaagactacgaagaggtcaaggcaaaggggtc 304 |||||||||||||||||||||||||||||||||||| || ||||| || ||||||||| | Sbjct: 300 ccccaaggtccactcgctgcagctgcggaaagactatgaggaggtaaaagcaaaggggac 359 Query: 305 ggagaatttcgacagggagctcgaggacatgatagacaggctcatcgtcgagtgcgagcg 364 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 360 ggagaatttcgacagggagctcgaggacatgatagacaggctcatcgtggagtgcgagcg 419 Query: 365 caaaatccagagggcgctcaaacgcctcgccgacgaggatgccaaggctgctattgcgat 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 420 caaaatccagagggcgctcaaacgcctcgccgacgaggatgccaaggctgctatcgccat 479 Query: 425 atccgtctccgaggtcactcagtctgaagaggttgcgcagctctcaaaggaaatcaagga 484 |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 480 atccgtctccgaggtcactcagtctgaagaagttgcgcagctgtcaaaggaaatcaagga 539 Query: 485 gaaaatgaaagaagctgatatcttcgattttgaagggaagactgatgataaaatcaagac 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 gaaaatgaaagaagctgatatcttcgattttgaagggaagactgatgataaaatcaagac 599 Query: 545 catggagttggtggaagaactaagatctaaaagggctgacatgcaggctaccctcttgct 604 |||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 600 catggaattggtggaagaattaagatctaaaagggctgacctgcaggctaccctcttgct 659 Query: 605 tgatgcctttaacaagga 622 |||||||||||||||||| Sbjct: 660 tgatgcctttaacaagga 677
>ref|XM_470379.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2501 Score = 589 bits (297), Expect = e-165 Identities = 486/549 (88%) Strand = Plus / Plus Query: 74 cgccatggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcga 133 ||||||||| |||||| ||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 145 cgccatggatgcgatgaggaagcaactcgacgtgctcatgggggcaaaccgcaacggcga 204 Query: 134 cgtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccgg 193 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 205 cgtgcgggaggtcagccgcaagtactacgaccgcgacgtctgccgcctcttcctcgccgg 264 Query: 194 cctctgcccccacgacctcttccagctcacgaaaatggatctcggaccgtgccccaaggt 253 ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || Sbjct: 265 cctctgcccccacgacctcttccagctcacgaaaatggatctcgggccttgccccaaagt 324 Query: 254 ccactcgctgcagctgcggaaagactacgaagaggtcaaggcaaaggggtcggagaattt 313 || ||||||||||| ||||| || || ||||| || |||||||| || | || |||| Sbjct: 325 tcattcgctgcagctacggaaggattatgaagaagtaaaggcaaaaggaacagaaaatta 384 Query: 314 cgacagggagctcgaggacatgatagacaggctcatcgtcgagtgcgagcgcaaaatcca 373 || ||||| |||||||| |||||||||||||||||||| ||||||||| | ||||| || Sbjct: 385 tgatagggaactcgaggaaatgatagacaggctcatcgtggagtgcgagaggaaaattca 444 Query: 374 gagggcgctcaaacgcctcgccgacgaggatgccaaggctgctattgcgatatccgtctc 433 ||||||||| || || || || || ||||||||||||||||||||||| ||||| || || Sbjct: 445 gagggcgctgaagcgtcttgctgatgaggatgccaaggctgctattgcaatatctgtttc 504 Query: 434 cgaggtcactcagtctgaagaggttgcgcagctctcaaaggaaatcaaggagaaaatgaa 493 ||||| |||||| | || ||||| |||| | |||||||| |||||||| |||||||| Sbjct: 505 tgaggttactcagacagatgaggtgttgcagttgtcaaaggagatcaaggaaaaaatgaa 564 Query: 494 agaagctgatatcttcgattttgaagggaagactgatgataaaatcaagaccatggagtt 553 ||||| ||||| || |||||||||||||| |||||||||||||||||||||||||| | Sbjct: 565 agaagttgatacctatgattttgaagggaaaactgatgataaaatcaagaccatggaagt 624 Query: 554 ggtggaagaactaagatctaaaagggctgacatgcaggctaccctcttgcttgatgcctt 613 |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 625 ggtggaagaattaagatctaaaagggctgacatgcaggctacccttctgcttgatgcctt 684 Query: 614 taacaagga 622 ||||||||| Sbjct: 685 taacaagga 693
>dbj|AK101661.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057K08, full insert sequence Length = 2502 Score = 589 bits (297), Expect = e-165 Identities = 486/549 (88%) Strand = Plus / Plus Query: 74 cgccatggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcga 133 ||||||||| |||||| ||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 146 cgccatggatgcgatgaggaagcaactcgacgtgctcatgggggcaaaccgcaacggcga 205 Query: 134 cgtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccgg 193 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 206 cgtgcgggaggtcagccgcaagtactacgaccgcgacgtctgccgcctcttcctcgccgg 265 Query: 194 cctctgcccccacgacctcttccagctcacgaaaatggatctcggaccgtgccccaaggt 253 ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || Sbjct: 266 cctctgcccccacgacctcttccagctcacgaaaatggatctcgggccttgccccaaagt 325 Query: 254 ccactcgctgcagctgcggaaagactacgaagaggtcaaggcaaaggggtcggagaattt 313 || ||||||||||| ||||| || || ||||| || |||||||| || | || |||| Sbjct: 326 tcattcgctgcagctacggaaggattatgaagaagtaaaggcaaaaggaacagaaaatta 385 Query: 314 cgacagggagctcgaggacatgatagacaggctcatcgtcgagtgcgagcgcaaaatcca 373 || ||||| |||||||| |||||||||||||||||||| ||||||||| | ||||| || Sbjct: 386 tgatagggaactcgaggaaatgatagacaggctcatcgtggagtgcgagaggaaaattca 445 Query: 374 gagggcgctcaaacgcctcgccgacgaggatgccaaggctgctattgcgatatccgtctc 433 ||||||||| || || || || || ||||||||||||||||||||||| ||||| || || Sbjct: 446 gagggcgctgaagcgtcttgctgatgaggatgccaaggctgctattgcaatatctgtttc 505 Query: 434 cgaggtcactcagtctgaagaggttgcgcagctctcaaaggaaatcaaggagaaaatgaa 493 ||||| |||||| | || ||||| |||| | |||||||| |||||||| |||||||| Sbjct: 506 tgaggttactcagacagatgaggtgttgcagttgtcaaaggagatcaaggaaaaaatgaa 565 Query: 494 agaagctgatatcttcgattttgaagggaagactgatgataaaatcaagaccatggagtt 553 ||||| ||||| || |||||||||||||| |||||||||||||||||||||||||| | Sbjct: 566 agaagttgatacctatgattttgaagggaaaactgatgataaaatcaagaccatggaagt 625 Query: 554 ggtggaagaactaagatctaaaagggctgacatgcaggctaccctcttgcttgatgcctt 613 |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 626 ggtggaagaattaagatctaaaagggctgacatgcaggctacccttctgcttgatgcctt 685 Query: 614 taacaagga 622 ||||||||| Sbjct: 686 taacaagga 694
>ref|XM_470378.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1221 Score = 581 bits (293), Expect = e-162 Identities = 482/545 (88%) Strand = Plus / Plus Query: 78 atggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcgacgtg 137 ||||| |||||| ||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 1 atggatgcgatgaggaagcaactcgacgtgctcatgggggcaaaccgcaacggcgacgtg 60 Query: 138 cgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccggcctc 197 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 61 cgggaggtcagccgcaagtactacgaccgcgacgtctgccgcctcttcctcgccggcctc 120 Query: 198 tgcccccacgacctcttccagctcacgaaaatggatctcggaccgtgccccaaggtccac 257 ||||||||||||||||||||||||||||||||||||||||| || |||||||| || || Sbjct: 121 tgcccccacgacctcttccagctcacgaaaatggatctcgggccttgccccaaagttcat 180 Query: 258 tcgctgcagctgcggaaagactacgaagaggtcaaggcaaaggggtcggagaatttcgac 317 ||||||||||| ||||| || || ||||| || |||||||| || | || |||| || Sbjct: 181 tcgctgcagctacggaaggattatgaagaagtaaaggcaaaaggaacagaaaattatgat 240 Query: 318 agggagctcgaggacatgatagacaggctcatcgtcgagtgcgagcgcaaaatccagagg 377 ||||| |||||||| |||||||||||||||||||| ||||||||| | ||||| |||||| Sbjct: 241 agggaactcgaggaaatgatagacaggctcatcgtggagtgcgagaggaaaattcagagg 300 Query: 378 gcgctcaaacgcctcgccgacgaggatgccaaggctgctattgcgatatccgtctccgag 437 ||||| || || || || || ||||||||||||||||||||||| ||||| || || ||| Sbjct: 301 gcgctgaagcgtcttgctgatgaggatgccaaggctgctattgcaatatctgtttctgag 360 Query: 438 gtcactcagtctgaagaggttgcgcagctctcaaaggaaatcaaggagaaaatgaaagaa 497 || |||||| | || ||||| |||| | |||||||| |||||||| |||||||||||| Sbjct: 361 gttactcagacagatgaggtgttgcagttgtcaaaggagatcaaggaaaaaatgaaagaa 420 Query: 498 gctgatatcttcgattttgaagggaagactgatgataaaatcaagaccatggagttggtg 557 | ||||| || |||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 421 gttgatacctatgattttgaagggaaaactgatgataaaatcaagaccatggaagtggtg 480 Query: 558 gaagaactaagatctaaaagggctgacatgcaggctaccctcttgcttgatgcctttaac 617 |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 481 gaagaattaagatctaaaagggctgacatgcaggctacccttctgcttgatgcctttaac 540 Query: 618 aagga 622 ||||| Sbjct: 541 aagga 545
>gb|AY224454.1| Oryza sativa (japonica cultivar-group) isolate 23401 sarcoplasmic reticulum protein-like protein mRNA, complete cds Length = 1221 Score = 581 bits (293), Expect = e-162 Identities = 482/545 (88%) Strand = Plus / Plus Query: 78 atggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcgacgtg 137 ||||| |||||| ||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 1 atggatgcgatgaggaagcaactcgacgtgctcatgggggcaaaccgcaacggcgacgtg 60 Query: 138 cgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccggcctc 197 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 61 cgggaggtcagccgcaagtactacgaccgcgacgtctgccgcctcttcctcgccggcctc 120 Query: 198 tgcccccacgacctcttccagctcacgaaaatggatctcggaccgtgccccaaggtccac 257 ||||||||||||||||||||||||||||||||||||||||| || |||||||| || || Sbjct: 121 tgcccccacgacctcttccagctcacgaaaatggatctcgggccttgccccaaagttcat 180 Query: 258 tcgctgcagctgcggaaagactacgaagaggtcaaggcaaaggggtcggagaatttcgac 317 ||||||||||| ||||| || || ||||| || |||||||| || | || |||| || Sbjct: 181 tcgctgcagctacggaaggattatgaagaagtaaaggcaaaaggaacagaaaattatgat 240 Query: 318 agggagctcgaggacatgatagacaggctcatcgtcgagtgcgagcgcaaaatccagagg 377 ||||| |||||||| |||||||||||||||||||| ||||||||| | ||||| |||||| Sbjct: 241 agggaactcgaggaaatgatagacaggctcatcgtggagtgcgagaggaaaattcagagg 300 Query: 378 gcgctcaaacgcctcgccgacgaggatgccaaggctgctattgcgatatccgtctccgag 437 ||||| || || || || || ||||||||||||||||||||||| ||||| || || ||| Sbjct: 301 gcgctgaagcgtcttgctgatgaggatgccaaggctgctattgcaatatctgtttctgag 360 Query: 438 gtcactcagtctgaagaggttgcgcagctctcaaaggaaatcaaggagaaaatgaaagaa 497 || |||||| | || ||||| |||| | |||||||| |||||||| |||||||||||| Sbjct: 361 gttactcagacagatgaggtgttgcagttgtcaaaggagatcaaggaaaaaatgaaagaa 420 Query: 498 gctgatatcttcgattttgaagggaagactgatgataaaatcaagaccatggagttggtg 557 | ||||| || |||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 421 gttgatacctatgattttgaagggaaaactgatgataaaatcaagaccatggaagtggtg 480 Query: 558 gaagaactaagatctaaaagggctgacatgcaggctaccctcttgcttgatgcctttaac 617 |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 481 gaagaattaagatctaaaagggctgacatgcaggctacccttctgcttgatgcctttaac 540 Query: 618 aagga 622 ||||| Sbjct: 541 aagga 545
>dbj|AK067985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124N18, full insert sequence Length = 1252 Score = 581 bits (293), Expect = e-162 Identities = 485/549 (88%) Strand = Plus / Plus Query: 74 cgccatggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcga 133 ||||||||| |||||| ||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 105 cgccatggatgcgatgaggaagcaactcgacgtgctcatgggggcaaaccgcaacggcga 164 Query: 134 cgtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccgg 193 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 165 cgtgcgggaggtcagccgcaagtactacgaccgcgacgtctgccgcctcttcctcgccgg 224 Query: 194 cctctgcccccacgacctcttccagctcacgaaaatggatctcggaccgtgccccaaggt 253 ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || Sbjct: 225 cctctgcccccacgacctcttccagctcacgaaaatggatctcgggccttgccccaaagt 284 Query: 254 ccactcgctgcagctgcggaaagactacgaagaggtcaaggcaaaggggtcggagaattt 313 || ||||||||||| ||||| || || ||||| || |||||||| || | || |||| Sbjct: 285 tcattcgctgcagctacggaaggattatgaagaagtaaaggcaaaaggaacagaaaatta 344 Query: 314 cgacagggagctcgaggacatgatagacaggctcatcgtcgagtgcgagcgcaaaatcca 373 || ||||| |||||||| |||||||||||||||||||| ||||||||| | ||||| || Sbjct: 345 tgatagggaactcgaggaaatgatagacaggctcatcgtggagtgcgagaggaaaattca 404 Query: 374 gagggcgctcaaacgcctcgccgacgaggatgccaaggctgctattgcgatatccgtctc 433 ||||||||| || || || || || ||||||||||||||||||||||| ||||| || || Sbjct: 405 gagggcgctgaagcgtcttgctgatgaggatgccaaggctgctattgcaatatctgtttc 464 Query: 434 cgaggtcactcagtctgaagaggttgcgcagctctcaaaggaaatcaaggagaaaatgaa 493 ||||| |||||| | || ||||| |||| | |||||||| |||||||| |||||||| Sbjct: 465 tgaggttactcagacagatgaggtgttgcagttgtcaaaggagatcaaggaaaaaatgaa 524 Query: 494 agaagctgatatcttcgattttgaagggaagactgatgataaaatcaagaccatggagtt 553 ||||| ||||| || ||||||| |||||| |||||||||||||||||||||||||| | Sbjct: 525 agaagttgatacctatgattttggagggaaaactgatgataaaatcaagaccatggaagt 584 Query: 554 ggtggaagaactaagatctaaaagggctgacatgcaggctaccctcttgcttgatgcctt 613 |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 585 ggtggaagaattaagatctaaaagggctgacatgcaggctacccttctgcttgatgcctt 644 Query: 614 taacaagga 622 ||||||||| Sbjct: 645 taacaagga 653
>gb|AY596591.1| Saccharum officinarum clone SCCCCL4011G05, complete sequence Length = 1733 Score = 400 bits (202), Expect = e-108 Identities = 463/550 (84%) Strand = Plus / Minus Query: 73 ccgccatggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcg 132 |||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1557 ccgccatggacgcgttccggaagcagctggacgtgctcatgggcgccaaccgcaacggcg 1498 Query: 133 acgtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccg 192 |||| |||||| |||||||| |||| |||||||||||||||||||||||||||||| | Sbjct: 1497 acgtcgaggaggtgaaccgcaactactacgaccgcgacgtctgccgcctcttcctcgcgg 1438 Query: 193 gcctctgcccccacgacctcttccagctcacgaaaatggatctcggaccgtgccccaagg 252 |||| |||||||| |||||||||||||||||||||||||||||||| || || | ||| Sbjct: 1437 gcctttgcccccatgacctcttccagctcacgaaaatggatctcggtccttgttctaaga 1378 Query: 253 tccactcgctgcagctgcggaaagactacgaagaggtcaaggcaaaggggtcggagaatt 312 | |||||||| || ||||||||||| || ||||| | || |||||||| ||||||| Sbjct: 1377 ttcactcgcttcaactgcggaaagattatgaagaagcgaaagcaaagggaaaagagaatt 1318 Query: 313 tcgacagggagctcgaggacatgatagacaggctcatcgtcgagtgcgagcgcaaaatcc 372 | || || || |||||||| |||||||| |||||||| || |||||||| || ||||| | Sbjct: 1317 ttgatagagaactcgaggatatgatagaaaggctcattgtggagtgcgaccggaaaattc 1258 Query: 373 agagggcgctcaaacgcctcgccgacgaggatgccaaggctgctattgcgatatccgtct 432 ||||||| || ||||| || || || || |||||||||||||||||||| |||||||||| Sbjct: 1257 agagggccctgaaacggcttgcggatgatgatgccaaggctgctattgcaatatccgtct 1198 Query: 433 ccgaggtcactcagtctgaagaggttgcgcagctctcaaaggaaatcaaggagaaaatga 492 | ||||| |||| | | || || | |||||| ||||| | |||||||| ||||||| Sbjct: 1197 ctgaggttactctgacggatgacatactgcagctgtcaaaacagatcaaggaaaaaatga 1138 Query: 493 aagaagctgatatcttcgattttgaagggaagactgatgataaaatcaagaccatggagt 552 ||||| ||| ||| ||||||||||||| |||||||| ||||| ||| || ||| Sbjct: 1137 tagaagtcgatgcctttgattttgaagggagaactgatgacaaaataaaggcccaggaag 1078 Query: 553 tggtggaagaactaagatctaaaagggctgacatgcaggctaccctcttgcttgatgcct 612 | ||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||| | Sbjct: 1077 tagtggaagaactcagagctaaaagagctgatatgcaggctaccctcttgcttgatgctt 1018 Query: 613 ttaacaagga 622 |||||||||| Sbjct: 1017 ttaacaagga 1008
>ref|XM_466624.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1611 Score = 250 bits (126), Expect = 5e-63 Identities = 180/198 (90%) Strand = Plus / Plus Query: 74 cgccatggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcga 133 ||||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||||||| Sbjct: 96 cgccatggacgcgatccggaagcagctcgaccagctcatgggcgccaaccgcaacggcga 155 Query: 134 cgtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccgg 193 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 156 cgtgcgggaggtcagccgcaagtactacgaccgcgacgtctgccgcctcttcctcgccgg 215 Query: 194 cctctgcccccacgacctcttccagctcacgaaaatggatctcggaccgtgccccaaggt 253 |||||||||||||||||| ||||||||||| || ||||| | || || ||||| ||| | Sbjct: 216 cctctgcccccacgacctgttccagctcaccaagatggacatggggccatgcccgaagat 275 Query: 254 ccactcgctgcagctgcg 271 ||||||||||||||||| Sbjct: 276 gcactcgctgcagctgcg 293
>dbj|AK066104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052G16, full insert sequence Length = 1611 Score = 248 bits (125), Expect = 2e-62 Identities = 179/197 (90%) Strand = Plus / Plus Query: 75 gccatggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcgac 134 |||||||||||||| ||||||||||| ||| ||||||||| |||||||||||||||||| Sbjct: 97 gccatggacgcgatccggaagcagctcgaccagctcatgggcgccaaccgcaacggcgac 156 Query: 135 gtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccggc 194 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 157 gtgcgggaggtcagccgcaagtactacgaccgcgacgtctgccgcctcttcctcgccggc 216 Query: 195 ctctgcccccacgacctcttccagctcacgaaaatggatctcggaccgtgccccaaggtc 254 ||||||||||||||||| ||||||||||| || ||||| | || || ||||| ||| | Sbjct: 217 ctctgcccccacgacctgttccagctcaccaagatggacatggggccatgcccgaagatg 276 Query: 255 cactcgctgcagctgcg 271 ||||||||||||||||| Sbjct: 277 cactcgctgcagctgcg 293
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 244 bits (123), Expect = 3e-61 Identities = 144/151 (95%) Strand = Plus / Minus Query: 74 cgccatggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcga 133 ||||||||| |||||| ||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 35148439 cgccatggatgcgatgaggaagcaactcgacgtgctcatgggggcaaaccgcaacggcga 35148380 Query: 134 cgtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccgg 193 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 35148379 cgtgcgggaggtcagccgcaagtactacgaccgcgacgtctgccgcctcttcctcgccgg 35148320 Query: 194 cctctgcccccacgacctcttccagctcacg 224 ||||||||||||||||||||||||||||||| Sbjct: 35148319 cctctgcccccacgacctcttccagctcacg 35148289 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 510 gattttgaagggaagactgatgataaaatcaagaccatggagttggtggaagaactaaga 569 |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 35146580 gattttgaagggaaaactgatgataaaatcaagaccatggaagtggtggaagaattaaga 35146521 Query: 570 tctaaaagggctgacatgcagg 591 |||||||||||||||||||||| Sbjct: 35146520 tctaaaagggctgacatgcagg 35146499 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 318 agggagctcgaggacatgatagacaggctcatcgtcgagtgcgagcgcaaaatccagagg 377 ||||| |||||||| |||||||||||||||||||| ||||||||| | ||||| |||||| Sbjct: 35147847 agggaactcgaggaaatgatagacaggctcatcgtggagtgcgagaggaaaattcagagg 35147788 Query: 378 gcgctcaaacgcctcgccgacgaggatgccaaggctgctattgcgatatccgtctccgag 437 ||||| || || || || || ||||||||||||||||||||||| ||||| || || ||| Sbjct: 35147787 gcgctgaagcgtcttgctgatgaggatgccaaggctgctattgcaatatctgtttctgag 35147728 Query: 438 gtcactcag 446 || |||||| Sbjct: 35147727 gttactcag 35147719 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 586 tgcaggctaccctcttgcttgatgcctttaacaagga 622 ||||||||||||| |||||||||||||||||||||| Sbjct: 35146384 tgcaggctacccttctgcttgatgcctttaacaagga 35146348 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 224 gaaaatggatctcggaccgtgccccaaggtccactcgctgcagctgcggaa 274 ||||||||||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 35148043 gaaaatggatctcgggccttgccccaaagttcattcgctgcagctacggaa 35147993 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 468 tcaaaggaaatcaaggagaaaatgaaagaagctgata 504 |||||||| |||||||| ||||||||||||| ||||| Sbjct: 35147616 tcaaaggagatcaaggaaaaaatgaaagaagttgata 35147580 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 56 cgccggagcggcggcggccgccatggacgc 85 |||||||||||||||| |||||||| |||| Sbjct: 33602097 cgccggagcggcggcgaccgccatgtacgc 33602068
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 244 bits (123), Expect = 3e-61 Identities = 144/151 (95%) Strand = Plus / Minus Query: 74 cgccatggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcga 133 ||||||||| |||||| ||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 27200 cgccatggatgcgatgaggaagcaactcgacgtgctcatgggggcaaaccgcaacggcga 27141 Query: 134 cgtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccgg 193 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 27140 cgtgcgggaggtcagccgcaagtactacgaccgcgacgtctgccgcctcttcctcgccgg 27081 Query: 194 cctctgcccccacgacctcttccagctcacg 224 ||||||||||||||||||||||||||||||| Sbjct: 27080 cctctgcccccacgacctcttccagctcacg 27050 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 510 gattttgaagggaagactgatgataaaatcaagaccatggagttggtggaagaactaaga 569 |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 25341 gattttgaagggaaaactgatgataaaatcaagaccatggaagtggtggaagaattaaga 25282 Query: 570 tctaaaagggctgacatgcagg 591 |||||||||||||||||||||| Sbjct: 25281 tctaaaagggctgacatgcagg 25260 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 318 agggagctcgaggacatgatagacaggctcatcgtcgagtgcgagcgcaaaatccagagg 377 ||||| |||||||| |||||||||||||||||||| ||||||||| | ||||| |||||| Sbjct: 26608 agggaactcgaggaaatgatagacaggctcatcgtggagtgcgagaggaaaattcagagg 26549 Query: 378 gcgctcaaacgcctcgccgacgaggatgccaaggctgctattgcgatatccgtctccgag 437 ||||| || || || || || ||||||||||||||||||||||| ||||| || || ||| Sbjct: 26548 gcgctgaagcgtcttgctgatgaggatgccaaggctgctattgcaatatctgtttctgag 26489 Query: 438 gtcactcag 446 || |||||| Sbjct: 26488 gttactcag 26480 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 586 tgcaggctaccctcttgcttgatgcctttaacaagga 622 ||||||||||||| |||||||||||||||||||||| Sbjct: 25145 tgcaggctacccttctgcttgatgcctttaacaagga 25109 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 224 gaaaatggatctcggaccgtgccccaaggtccactcgctgcagctgcggaa 274 ||||||||||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 26804 gaaaatggatctcgggccttgccccaaagttcattcgctgcagctacggaa 26754 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 468 tcaaaggaaatcaaggagaaaatgaaagaagctgata 504 |||||||| |||||||| ||||||||||||| ||||| Sbjct: 26377 tcaaaggagatcaaggaaaaaatgaaagaagttgata 26341
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 244 bits (123), Expect = 3e-61 Identities = 144/151 (95%) Strand = Plus / Minus Query: 74 cgccatggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcga 133 ||||||||| |||||| ||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 35238511 cgccatggatgcgatgaggaagcaactcgacgtgctcatgggggcaaaccgcaacggcga 35238452 Query: 134 cgtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccgg 193 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 35238451 cgtgcgggaggtcagccgcaagtactacgaccgcgacgtctgccgcctcttcctcgccgg 35238392 Query: 194 cctctgcccccacgacctcttccagctcacg 224 ||||||||||||||||||||||||||||||| Sbjct: 35238391 cctctgcccccacgacctcttccagctcacg 35238361 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 510 gattttgaagggaagactgatgataaaatcaagaccatggagttggtggaagaactaaga 569 |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 35236652 gattttgaagggaaaactgatgataaaatcaagaccatggaagtggtggaagaattaaga 35236593 Query: 570 tctaaaagggctgacatgcagg 591 |||||||||||||||||||||| Sbjct: 35236592 tctaaaagggctgacatgcagg 35236571 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 318 agggagctcgaggacatgatagacaggctcatcgtcgagtgcgagcgcaaaatccagagg 377 ||||| |||||||| |||||||||||||||||||| ||||||||| | ||||| |||||| Sbjct: 35237919 agggaactcgaggaaatgatagacaggctcatcgtggagtgcgagaggaaaattcagagg 35237860 Query: 378 gcgctcaaacgcctcgccgacgaggatgccaaggctgctattgcgatatccgtctccgag 437 ||||| || || || || || ||||||||||||||||||||||| ||||| || || ||| Sbjct: 35237859 gcgctgaagcgtcttgctgatgaggatgccaaggctgctattgcaatatctgtttctgag 35237800 Query: 438 gtcactcag 446 || |||||| Sbjct: 35237799 gttactcag 35237791 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 586 tgcaggctaccctcttgcttgatgcctttaacaagga 622 ||||||||||||| |||||||||||||||||||||| Sbjct: 35236456 tgcaggctacccttctgcttgatgcctttaacaagga 35236420 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 224 gaaaatggatctcggaccgtgccccaaggtccactcgctgcagctgcggaa 274 ||||||||||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 35238115 gaaaatggatctcgggccttgccccaaagttcattcgctgcagctacggaa 35238065 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 468 tcaaaggaaatcaaggagaaaatgaaagaagctgata 504 |||||||| |||||||| ||||||||||||| ||||| Sbjct: 35237688 tcaaaggagatcaaggaaaaaatgaaagaagttgata 35237652 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 56 cgccggagcggcggcggccgccatggacgc 85 |||||||||||||||| |||||||| |||| Sbjct: 33692569 cgccggagcggcggcgaccgccatgtacgc 33692540
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 234 bits (118), Expect = 3e-58 Identities = 142/150 (94%) Strand = Plus / Plus Query: 74 cgccatggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcga 133 ||||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||||||| Sbjct: 23748780 cgccatggacgcgatccggaagcagctcgaccagctcatgggcgccaaccgcaacggcga 23748839 Query: 134 cgtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccgg 193 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 23748840 cgtgcgggaggtcagccgcaagtactacgaccgcgacgtctgccgcctcttcctcgccgg 23748899 Query: 194 cctctgcccccacgacctcttccagctcac 223 |||||||||||||||||| ||||||||||| Sbjct: 23748900 cctctgcccccacgacctgttccagctcac 23748929 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gcggcggcggccgccatggacgcgat 88 ||||||||||| |||||||||||||| Sbjct: 23174170 gcggcggcggcggccatggacgcgat 23174195 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 cctcgccggagcggcggcggc 73 ||||||||||||||||||||| Sbjct: 5623462 cctcgccggagcggcggcggc 5623442
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1058_F07 Length = 95841 Score = 234 bits (118), Expect = 3e-58 Identities = 142/150 (94%) Strand = Plus / Plus Query: 74 cgccatggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcga 133 ||||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||||||| Sbjct: 59364 cgccatggacgcgatccggaagcagctcgaccagctcatgggcgccaaccgcaacggcga 59423 Query: 134 cgtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccgg 193 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 59424 cgtgcgggaggtcagccgcaagtactacgaccgcgacgtctgccgcctcttcctcgccgg 59483 Query: 194 cctctgcccccacgacctcttccagctcac 223 |||||||||||||||||| ||||||||||| Sbjct: 59484 cctctgcccccacgacctgttccagctcac 59513
>gb|AY112485.1| Zea mays CL15700_1 mRNA sequence Length = 549 Score = 218 bits (110), Expect = 2e-53 Identities = 152/166 (91%) Strand = Plus / Plus Query: 73 ccgccatggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcg 132 |||||||||||||| | ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 92 ccgccatggacgcgttccggaaacagctggacgtgctcatgggcgccaaccgcaacggcg 151 Query: 133 acgtgcgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccg 192 |||| |||||| | |||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 152 acgtcgaggaggtgagccgcaactactacgaccgcgacgtctgccgcctcttcctcgccg 211 Query: 193 gcctctgcccccacgacctcttccagctcacgaaaatggatctcgg 238 | |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 212 gtctctgcccacacgacctctttcagctcacgaaaatggatctcgg 257 Score = 89.7 bits (45), Expect = 1e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 324 ctcgaggacatgatagacaggctcatcgtcgagtgcgagcgcaaaatccagagggcgctc 383 |||||||| |||||||| |||||||| || ||||| || | ||||| |||||||| || Sbjct: 343 ctcgaggatatgatagaaaggctcattgtggagtgtgacaggaaaattcagagggcccta 402 Query: 384 aaacgcctcgccgacgaggatgccaaggctgctattgcgatatccgtctccgaggtcact 443 ||||| || || || || |||||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 403 aaacgacttgcagatgacgatgccaaggctgctattgcgatatcggtctctgaggttact 462 Query: 444 c 444 | Sbjct: 463 c 463
>gb|AY104000.1| Zea mays PCO071024 mRNA sequence Length = 1252 Score = 117 bits (59), Expect = 5e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 480 aaggagaaaatgaaagaagctgatatcttcgattttgaagggaagactgatgataaaatc 539 |||||||||||| ||||| |||| ||| ||||||||||||| |||||||| ||||| Sbjct: 47 aaggagaaaatggcagaagttgatgcctttgattttgaagggagaactgatgacaaaata 106 Query: 540 aagaccatggagttggtggaagaactaagatctaaaagggctgacatgcaggctaccctc 599 ||| || ||| | |||||||| |||||| ||||||| ||||| ||||||||||||||| Sbjct: 107 aaggcccaggaagtagtggaagagctaagagctaaaagagctgatatgcaggctaccctc 166 Query: 600 ttgcttgatgcctttaacaagga 622 ||||||||||| ||||||||||| Sbjct: 167 ttgcttgatgcttttaacaagga 189
>ref|NM_111205.2| Arabidopsis thaliana unknown protein AT3G03340 mRNA, complete cds Length = 1635 Score = 87.7 bits (44), Expect = 4e-14 Identities = 161/200 (80%) Strand = Plus / Plus Query: 78 atggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcgacgtg 137 |||||||| || |||||||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 120 atggacgctataaggaagcagcttgatgtgctcatgggagctaaccgaaacggcgacgtt 179 Query: 138 cgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccggcctc 197 | |||||| || ||||| |||| |||||| || || || || || | | | | || ||| Sbjct: 180 caggaggtgaatcgcaaatactacgaccgtgatgtgtgtcgtctttacttgtctggtctc 239 Query: 198 tgcccccacgacctcttccagctcacgaaaatggatctcggaccgtgccccaaggtccac 257 ||||| ||||| |||||||| | |||||||||||| | ||||| ||||| ||||| ||| Sbjct: 240 tgccctcacgatctcttccaattgacgaaaatggatatgggaccatgcccaaaggtgcac 299 Query: 258 tcgctgcagctgcggaaaga 277 || ||||||| |||||||| Sbjct: 300 tctttgcagcttcggaaaga 319
>emb|BX823879.1|CNS0A5BS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZD04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1551 Score = 87.7 bits (44), Expect = 4e-14 Identities = 161/200 (80%) Strand = Plus / Plus Query: 78 atggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcgacgtg 137 |||||||| || |||||||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 88 atggacgctataaggaagcagcttgatgtgctcatgggagctaaccgaaacggcgacgtt 147 Query: 138 cgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccggcctc 197 | |||||| || ||||| |||| |||||| || || || || || | | | | || ||| Sbjct: 148 caggaggtgaatcgcaaatactacgaccgtgatgtgtgtcgtctttacttgtctggtctc 207 Query: 198 tgcccccacgacctcttccagctcacgaaaatggatctcggaccgtgccccaaggtccac 257 ||||| ||||| |||||||| | |||||||||||| | ||||| ||||| ||||| ||| Sbjct: 208 tgccctcacgatctcttccaattgacgaaaatggatatgggaccatgcccaaaggtgcac 267 Query: 258 tcgctgcagctgcggaaaga 277 || ||||||| |||||||| Sbjct: 268 tctttgcagcttcggaaaga 287
>ref|NM_121750.2| Arabidopsis thaliana unknown protein AT5G17440 mRNA, complete cds Length = 1529 Score = 79.8 bits (40), Expect = 1e-11 Identities = 160/200 (80%) Strand = Plus / Plus Query: 78 atggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcgacgtg 137 |||||||| ||| ||||||| || || ||||||||||| || ||| | |||||||| || Sbjct: 88 atggacgctatgaggaagcaactcgatgtgctcatgggagctaacagaaacggcgatgtc 147 Query: 138 cgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccggcctc 197 |||||||| ||||| |||| ||||||||| || ||||| || | |||| | || ||| Sbjct: 148 actgaggtcaatcgcaaatactacgaccgcgatgtttgccgtctttacctctctggtctc 207 Query: 198 tgcccccacgacctcttccagctcacgaaaatggatctcggaccgtgccccaaggtccac 257 ||||| ||||| || ||||| | |||||||||||| | || || ||||| ||||| ||| Sbjct: 208 tgccctcacgagcttttccaattgacgaaaatggatatgggtccttgcccaaaggtgcac 267 Query: 258 tcgctgcagctgcggaaaga 277 || |||||||| ||||||| Sbjct: 268 tctttgcagctgaggaaaga 287
>gb|AY063725.1| Arabidopsis thaliana AT5g17440/K3M16_10 mRNA, complete cds Length = 1215 Score = 79.8 bits (40), Expect = 1e-11 Identities = 160/200 (80%) Strand = Plus / Plus Query: 78 atggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcgacgtg 137 |||||||| ||| ||||||| || || ||||||||||| || ||| | |||||||| || Sbjct: 1 atggacgctatgaggaagcaactcgatgtgctcatgggagctaacagaaacggcgatgtc 60 Query: 138 cgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccggcctc 197 |||||||| ||||| |||| ||||||||| || ||||| || | |||| | || ||| Sbjct: 61 actgaggtcaatcgcaaatactacgaccgcgatgtttgccgtctttacctctctggtctc 120 Query: 198 tgcccccacgacctcttccagctcacgaaaatggatctcggaccgtgccccaaggtccac 257 ||||| ||||| || ||||| | |||||||||||| | || || ||||| ||||| ||| Sbjct: 121 tgccctcacgagcttttccaattgacgaaaatggatatgggtccttgcccaaaggtgcac 180 Query: 258 tcgctgcagctgcggaaaga 277 || |||||||| ||||||| Sbjct: 181 tctttgcagctgaggaaaga 200
>gb|AY052667.1| Arabidopsis thaliana AT5g17440/K3M16_10 mRNA, complete cds Length = 1529 Score = 79.8 bits (40), Expect = 1e-11 Identities = 160/200 (80%) Strand = Plus / Plus Query: 78 atggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcgacgtg 137 |||||||| ||| ||||||| || || ||||||||||| || ||| | |||||||| || Sbjct: 87 atggacgctatgaggaagcaactcgatgtgctcatgggagctaacagaaacggcgatgtc 146 Query: 138 cgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccggcctc 197 |||||||| ||||| |||| ||||||||| || ||||| || | |||| | || ||| Sbjct: 147 actgaggtcaatcgcaaatactacgaccgcgatgtttgccgtctttacctctctggtctc 206 Query: 198 tgcccccacgacctcttccagctcacgaaaatggatctcggaccgtgccccaaggtccac 257 ||||| ||||| || ||||| | |||||||||||| | || || ||||| ||||| ||| Sbjct: 207 tgccctcacgagcttttccaattgacgaaaatggatatgggtccttgcccaaaggtgcac 266 Query: 258 tcgctgcagctgcggaaaga 277 || |||||||| ||||||| Sbjct: 267 tctttgcagctgaggaaaga 286
>gb|AC009895.4|ATAC009895 Arabidopsis thaliana chromosome III BAC T21P5 genomic sequence, complete sequence Length = 82289 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 78 atggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcgacgtg 137 |||||||| || |||||||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 73674 atggacgctataaggaagcagcttgatgtgctcatgggagctaaccgaaacggcgacgtt 73615 Query: 138 cgggaggtcaaccgcaagtacttcgaccg 166 | |||||| || ||||| |||| |||||| Sbjct: 73614 caggaggtgaatcgcaaatactacgaccg 73586
>emb|AL391150.1|ATK3M16 Arabidopsis thaliana DNA chromosome 5, BAC clone K3M16 (ESSA project) Length = 26604 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 78 atggacgcgatgcggaagcagctggacgtgctcatgggggccaaccgcaacggcgacgtg 137 |||||||| ||| ||||||| || || ||||||||||| || ||| | |||||||| || Sbjct: 90 atggacgctatgaggaagcaactcgatgtgctcatgggagctaacagaaacggcgatgtc 149 Query: 138 cgggaggtcaaccgcaagtacttcgaccgcgacgtctgccgcctcttcctcgccggcctc 197 |||||||| ||||| |||| ||||||||| || ||||| || | |||| | || ||| Sbjct: 150 actgaggtcaatcgcaaatactacgaccgcgatgtttgccgtctttacctctctggtctc 209 Query: 198 tgcccccacgacctcttcca 217 ||||| ||||| || ||||| Sbjct: 210 tgccctcacgagcttttcca 229
>gb|AY439301.1| Hevea brasiliensis clone hmct19 microsatellite sequence Length = 869 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 399 gaggatgccaaggctgctattgcgatatccgtctccgaggt 439 |||||||| |||||||||||||| ||||| ||||| ||||| Sbjct: 115 gaggatgcaaaggctgctattgcaatatcagtctctgaggt 75
>gb|AF279873.4| Homo sapiens chromosome 8 clone RP1-25D10, RP1-273G13, RP1-103E7 map 8p21-p11, complete sequence Length = 301232 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 465 ctctcaaaggaaatcaaggagaaa 488 |||||||||||||||||||||||| Sbjct: 96128 ctctcaaaggaaatcaaggagaaa 96105
>gb|AY088574.1| Arabidopsis thaliana clone 801 mRNA, complete sequence Length = 1291 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 222 acgaaaatggatctcggaccgtgccccaaggtccactcgctgcagctgcggaaaga 277 |||||||||||| | ||||| ||||| ||||| ||||| ||||||| |||||||| Sbjct: 7 acgaaaatggatatgggaccatgcccaaaggtgcactctttgcagcttcggaaaga 62
>gb|U70852.1| Caenorhabditis elegans cosmid F45E4, complete sequence Length = 47785 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 479 caaggagaaaatgaaagaagctg 501 ||||||||||||||||||||||| Sbjct: 39251 caaggagaaaatgaaagaagctg 39229
>ref|NM_068844.2| Caenorhabditis elegans HMG family member (hmg-5) (hmg-5) mRNA, complete cds Length = 626 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 479 caaggagaaaatgaaagaagctg 501 ||||||||||||||||||||||| Sbjct: 463 caaggagaaaatgaaagaagctg 485
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 473 ggaaatcaaggagaaaatgaaag 495 ||||||||||||||||||||||| Sbjct: 9831214 ggaaatcaaggagaaaatgaaag 9831192
>dbj|AP005701.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0095I04 Length = 138924 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 473 ggaaatcaaggagaaaatgaaag 495 ||||||||||||||||||||||| Sbjct: 13901 ggaaatcaaggagaaaatgaaag 13879
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 224 gaaaatggatctcggaccgtgccccaaggt 253 |||||||||||| ||||| ||||||||||| Sbjct: 229283 gaaaatggatcttggaccatgccccaaggt 229254
>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete sequence Length = 166888 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 56 cgccggagcggcggcggccgccatggacgc 85 |||||||||||||||| |||||||| |||| Sbjct: 62983 cgccggagcggcggcgaccgccatgtacgc 63012
>ref|XM_451582.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B01155g predicted mRNA Length = 1683 Score = 44.1 bits (22), Expect = 0.54 Identities = 37/42 (88%) Strand = Plus / Minus Query: 172 tctgccgcctcttcctcgccggcctctgcccccacgacctct 213 |||||||||||| || | |||| ||||||| ||||||||||| Sbjct: 1656 tctgccgcctctgccaccccggtctctgccgccacgacctct 1615
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 44.1 bits (22), Expect = 0.54 Identities = 37/42 (88%) Strand = Plus / Plus Query: 172 tctgccgcctcttcctcgccggcctctgcccccacgacctct 213 |||||||||||| || | |||| ||||||| ||||||||||| Sbjct: 91549 tctgccgcctctgccaccccggtctctgccgccacgacctct 91590
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 cctcgccggagcggcggcggcc 74 |||||||||||||||||||||| Sbjct: 246353 cctcgccggagcggcggcggcc 246332
>dbj|AB239800.1| Oryza sativa (japonica cultivar-group) OsIPT4 gene for adenylate isopentenyltransferase, complete cds Length = 1074 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 56 cgccggagcggcggcggccgccatggacgc 85 |||||||||||||||| |||||||| |||| Sbjct: 36 cgccggagcggcggcgaccgccatgtacgc 7
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 gcggcggcggccgccatggacg 84 |||||||||||||||||||||| Sbjct: 2835773 gcggcggcggccgccatggacg 2835752 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 acgtctgccgcctcttcctcgccg 192 ||||| |||||||||||||||||| Sbjct: 28269475 acgtccgccgcctcttcctcgccg 28269452
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 gcggcggcggccgccatggacg 84 |||||||||||||||||||||| Sbjct: 79254 gcggcggcggccgccatggacg 79233
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1568_B05 Length = 115325 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 gcggcggcggccgccatggacgcgat 88 ||||||||||| |||||||||||||| Sbjct: 31401 gcggcggcggcggccatggacgcgat 31426
>dbj|AK070756.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065G16, full insert sequence Length = 1672 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 56 cgccggagcggcggcggccgccatggacgc 85 |||||||||||||||| |||||||| |||| Sbjct: 159 cgccggagcggcggcgaccgccatgtacgc 130
>ref|XM_464512.1| Oryza sativa (japonica cultivar-group), mRNA Length = 249 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 cctcgccggagcggcggcggc 73 ||||||||||||||||||||| Sbjct: 14 cctcgccggagcggcggcggc 34
>ref|XM_978321.1| PREDICTED: Mus musculus ryanodine receptor 3 (Ryr3), mRNA Length = 14220 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 tcaaaggaaatcaaggagaaa 488 ||||||||||||||||||||| Sbjct: 739 tcaaaggaaatcaaggagaaa 759
>ref|XM_619795.3| PREDICTED: Mus musculus ryanodine receptor 3 (Ryr3), mRNA Length = 15410 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 tcaaaggaaatcaaggagaaa 488 ||||||||||||||||||||| Sbjct: 1027 tcaaaggaaatcaaggagaaa 1047
>ref|XM_917218.2| PREDICTED: Mus musculus ryanodine receptor 3 (Ryr3), mRNA Length = 15410 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 tcaaaggaaatcaaggagaaa 488 ||||||||||||||||||||| Sbjct: 1027 tcaaaggaaatcaaggagaaa 1047
>ref|XM_572846.1| Cryptococcus neoformans var. neoformans JEC21 small nuclear ribonucleoprotein (CNI00920) partial mRNA Length = 1272 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aaaatggatctcggaccgtgccccaaggt 253 ||||||||||| ||||| ||||||||||| Sbjct: 173 aaaatggatcttggaccatgccccaaggt 201
>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence Length = 211521 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaagaggtcaaggcaaagggg 302 ||||||||||||||||||||| Sbjct: 37596 gaagaggtcaaggcaaagggg 37616
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 gccgcctcttcctcgccggcctctgcccc 203 |||||||||||||||||||| ||| |||| Sbjct: 4320808 gccgcctcttcctcgccggcatcttcccc 4320780
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 472 aggaaatcaaggagaaaatga 492 ||||||||||||||||||||| Sbjct: 3049117 aggaaatcaaggagaaaatga 3049137
>ref|XM_575204.1| PREDICTED: Rattus norvegicus similar to ryanodine receptor, brain - rabbit (LOC499863), mRNA Length = 2448 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 tcaaaggaaatcaaggagaaa 488 ||||||||||||||||||||| Sbjct: 1054 tcaaaggaaatcaaggagaaa 1074
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tcttcctcgccggcctctgcc 201 ||||||||||||||||||||| Sbjct: 2236336 tcttcctcgccggcctctgcc 2236356
>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419A09 Length = 168064 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 cctcgccggagcggcggcggc 73 ||||||||||||||||||||| Sbjct: 51198 cctcgccggagcggcggcggc 51178
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 gaagaggtcaaggcaaagggg 302 ||||||||||||||||||||| Sbjct: 90551 gaagaggtcaaggcaaagggg 90531
>emb|AL662951.3|OSJN00154 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011E07, complete sequence Length = 165094 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 472 aggaaatcaaggagaaaatga 492 ||||||||||||||||||||| Sbjct: 110192 aggaaatcaaggagaaaatga 110212
>dbj|D50308.1| Lysobacter lactamgenus DNA for alpha-aminoadipyl-cysteinyl-valine synthetase, complete cds Length = 11401 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tcgccggagcggcggcggccg 75 ||||||||||||||||||||| Sbjct: 9962 tcgccggagcggcggcggccg 9942
>ref|NM_104359.2| Arabidopsis thaliana unknown protein AT1G54860 mRNA, complete cds Length = 835 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ggaaatcaaggagaaaatga 492 |||||||||||||||||||| Sbjct: 200 ggaaatcaaggagaaaatga 181
>ref|XM_477946.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1421 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 tctgcccccacgacctcttc 215 |||||||||||||||||||| Sbjct: 217 tctgcccccacgacctcttc 236
>ref|XM_506311.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0027N13.110 mRNA Length = 2157 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 tctgcccccacgacctcttc 215 |||||||||||||||||||| Sbjct: 213 tctgcccccacgacctcttc 232
>gb|AY618196.1| Sterkiella histriomuscorum clone UGC1O0004_H16_R genomic sequence Length = 610 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 tgcttgatgcctttaacaag 620 |||||||||||||||||||| Sbjct: 574 tgcttgatgcctttaacaag 593
>gb|AY618195.1| Sterkiella histriomuscorum clone UGC1O0004_H10_R genomic sequence Length = 610 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 tgcttgatgcctttaacaag 620 |||||||||||||||||||| Sbjct: 574 tgcttgatgcctttaacaag 593
>gb|AY618177.1| Sterkiella histriomuscorum clone UGC1O0002_B22_R genomic sequence Length = 1106 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 tgcttgatgcctttaacaag 620 |||||||||||||||||||| Sbjct: 573 tgcttgatgcctttaacaag 592
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 cccacgacctcttccagctc 221 |||||||||||||||||||| Sbjct: 133731 cccacgacctcttccagctc 133712
>gb|AC119615.7| Rattus norvegicus 10 NOVECTOR CH230-502G21 (Children's Hospital Oakland Research Institute) complete sequence Length = 156223 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 6660 cctctgcccccacgacctct 6679
>ref|NM_001006329.1| Gallus gallus methyltransferase like 2B (METTL2B), mRNA Length = 1480 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cgccggagcggcggcggccg 75 |||||||||||||||||||| Sbjct: 44 cgccggagcggcggcggccg 63
>gb|BC046099.1| Homo sapiens TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa, mRNA (cDNA clone MGC:57515 IMAGE:6067044), complete cds Length = 2188 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 1282 cctctgcccccacgacctct 1263
>gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0060K21, complete sequence Length = 153973 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 ccgcgacgtctgccgcctct 183 |||||||||||||||||||| Sbjct: 45338 ccgcgacgtctgccgcctct 45357
>gb|AF107252.1| Burkholderia thailandensis non-hemolytic phospholipase C (PlcN2) gene, complete cds Length = 2262 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cgccggagcggcggcggccg 75 |||||||||||||||||||| Sbjct: 89 cgccggagcggcggcggccg 70
>ref|XM_001001642.1| PREDICTED: Mus musculus MAD homolog 4 (Drosophila), transcript variant 2 (Smad4), mRNA Length = 2812 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 2122 ataaaatcaagaccatggag 2141
>ref|XM_001001632.1| PREDICTED: Mus musculus MAD homolog 4 (Drosophila), transcript variant 1 (Smad4), mRNA Length = 2703 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 2013 ataaaatcaagaccatggag 2032
>ref|XM_001001668.1| PREDICTED: Mus musculus MAD homolog 4 (Drosophila), transcript variant 4 (Smad4), mRNA Length = 3482 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 2792 ataaaatcaagaccatggag 2811
>ref|XM_001001679.1| PREDICTED: Mus musculus MAD homolog 4 (Drosophila), transcript variant 5 (Smad4), mRNA Length = 3873 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 3183 ataaaatcaagaccatggag 3202
>ref|XM_001001655.1| PREDICTED: Mus musculus MAD homolog 4 (Drosophila), transcript variant 3 (Smad4), mRNA Length = 3841 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 3151 ataaaatcaagaccatggag 3170
>ref|XM_001001692.1| PREDICTED: Mus musculus MAD homolog 4 (Drosophila), transcript variant 6 (Smad4), mRNA Length = 3928 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 3238 ataaaatcaagaccatggag 3257
>ref|XM_001001701.1| PREDICTED: Mus musculus MAD homolog 4 (Drosophila), transcript variant 7 (Smad4), mRNA Length = 4156 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 3466 ataaaatcaagaccatggag 3485
>ref|XM_987790.1| PREDICTED: Mus musculus MAD homolog 4 (Drosophila), transcript variant 3 (Smad4), mRNA Length = 2815 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 2124 ataaaatcaagaccatggag 2143
>ref|XM_987755.1| PREDICTED: Mus musculus MAD homolog 4 (Drosophila), transcript variant 5 (Smad4), mRNA Length = 2706 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 2015 ataaaatcaagaccatggag 2034
>ref|XM_987848.1| PREDICTED: Mus musculus MAD homolog 4 (Drosophila), transcript variant 7 (Smad4), mRNA Length = 3485 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 2794 ataaaatcaagaccatggag 2813
>ref|XM_987970.1| PREDICTED: Mus musculus MAD homolog 4 (Drosophila), transcript variant 4 (Smad4), mRNA Length = 4159 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 3468 ataaaatcaagaccatggag 3487
>gb|AC004989.1| Homo sapiens PAC clone RP5-1179J19 from 7, complete sequence Length = 85058 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 ctctcaaaggaaatcaaggagaaa 488 |||||| ||||||||||||||||| Sbjct: 56092 ctctcataggaaatcaaggagaaa 56115
>gb|AC134447.2| Mus musculus BAC clone RP24-186D1 from chromosome 18, complete sequence Length = 179514 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 165048 ataaaatcaagaccatggag 165029
>gb|AC132418.3| Mus musculus BAC clone RP23-251N2 from chromosome 18, complete sequence Length = 206588 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 193563 ataaaatcaagaccatggag 193582
>gb|BC035859.1| Homo sapiens cDNA clone IMAGE:5764694, partial cds Length = 479 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 tctgcccccacgacctcttc 215 |||||||||||||||||||| Sbjct: 294 tctgcccccacgacctcttc 313
>ref|XM_862578.1| PREDICTED: Canis familiaris similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 4 (LOC491135), mRNA Length = 1936 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 1315 cctctgcccccacgacctct 1296
>ref|XM_862569.1| PREDICTED: Canis familiaris similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 3 (LOC491135), mRNA Length = 1607 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 1315 cctctgcccccacgacctct 1296
>ref|XM_862559.1| PREDICTED: Canis familiaris similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 2 (LOC491135), mRNA Length = 1763 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 989 cctctgcccccacgacctct 970
>ref|XM_548255.2| PREDICTED: Canis familiaris similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 1 (LOC491135), mRNA Length = 2089 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 1315 cctctgcccccacgacctct 1296
>gb|AC131788.3| Mus musculus BAC clone RP24-440E10 from chromosome 7, complete sequence Length = 155587 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 194 cctctgcccccacgacctcttccagctc 221 ||||||||||||| |||||| ||||||| Sbjct: 114812 cctctgcccccactacctctcccagctc 114839
>gb|AC122839.4| Mus musculus BAC clone RP23-193K9 from 8, complete sequence Length = 177322 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 aggagaaaatgaaagaagct 500 |||||||||||||||||||| Sbjct: 66379 aggagaaaatgaaagaagct 66360
>gb|AC146543.2| Gasterosteus aculeatus clone CH213-67L12, complete sequence Length = 197879 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 atcaaggagaaaatgaaaga 496 |||||||||||||||||||| Sbjct: 189410 atcaaggagaaaatgaaaga 189391
>gb|U39645.1| Caenorhabditis elegans cosmid C14F11, complete sequence Length = 40572 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 aaaatgaaagaagctgatat 505 |||||||||||||||||||| Sbjct: 3541 aaaatgaaagaagctgatat 3560
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 ggagaaaatgaaagaagctg 501 |||||||||||||||||||| Sbjct: 1722021 ggagaaaatgaaagaagctg 1722040
>emb|AL606845.4| Human DNA sequence from clone RP11-126M14 on chromosome 6 Contains an ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g (ATP5L) pseudogene, complete sequence Length = 120700 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 464 gctctcaaaggaaatcaaggagaa 487 ||||||||||||||| |||||||| Sbjct: 117285 gctctcaaaggaaatgaaggagaa 117308
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cgcctcttcctcgccggcct 196 |||||||||||||||||||| Sbjct: 669970 cgcctcttcctcgccggcct 669951
>ref|XM_787217.1| PREDICTED: Strongylocentrotus purpuratus similar to CG31751-PA, isoform A (LOC587491), mRNA Length = 1179 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 ccactcgctgcagctgcggaaagactac 281 ||||||||||||||||| ||| |||||| Sbjct: 1005 ccactcgctgcagctgcagaacgactac 1032
>emb|AL161421.11| Human DNA sequence from clone RP11-156K23 on chromosome 13 Contains the 5' end of a novel gene (containd FLJ31509 and KIAA0970), a RAD17 homolog (S. pombe) pseudogene and a CpG island, complete sequence Length = 151445 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 470 aaaggaaatcaaggagaaaatgaaagaa 497 |||||||| ||| ||||||||||||||| Sbjct: 31235 aaaggaaaacaatgagaaaatgaaagaa 31208
>emb|AL596122.14| Mouse DNA sequence from clone RP23-320E6 on chromosome 11 Contains the Taf15 gene for TAF15 RNA polymerase II TATA box binding protein (TBP)-associated factor, two novel genes, the Ccl5, Ccl9, Ccl6, Ccl3 and Ccl4 genes for chemokine (C-C motif) ligand 5, 9, 6, 3 and 4, a ribosomal protein L9 (Rpl9) pseudogene, three extracellular proteinase inhibitor (Expi) pseudogene and an H+ transporting mitochondrial F1F0 complex ATP synthase subunit e (Atp5k) pseudogene,, complete sequence Length = 211873 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 16042 cctctgcccccacgacctct 16023
>gb|AC144489.2| Gasterosteus aculeatus clone CH213-2D11, complete sequence Length = 228976 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 atcaaggagaaaatgaaaga 496 |||||||||||||||||||| Sbjct: 37342 atcaaggagaaaatgaaaga 37323
>emb|AJ721086.1| Gallus gallus mRNA for hypothetical protein, clone 34l11 Length = 1480 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cgccggagcggcggcggccg 75 |||||||||||||||||||| Sbjct: 44 cgccggagcggcggcggccg 63
>gb|AY116669.1| Isochrysis galbana CCMP1323 oxygen evolving enhancer 1 precursor (psbO) mRNA, complete cds; nuclear gene for plastid product Length = 1244 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 tctgccgcctcttcctcgcc 191 |||||||||||||||||||| Sbjct: 1190 tctgccgcctcttcctcgcc 1171
>ref|NM_027427.1| Mus musculus TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf15), mRNA Length = 2050 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 1322 cctctgcccccacgacctct 1303
>gb|AC015849.5| Homo sapiens chromosome 17, clone RP11-362K1, complete sequence Length = 205040 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 74715 cctctgcccccacgacctct 74734
>dbj|AK146331.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:I730056L09 product:TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, full insert sequence Length = 2013 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 1284 cctctgcccccacgacctct 1265
>gb|AF110772.1|AF110772 Streptomyces aureofaciens CCM3239 putative aldehyde dehydrogenase (aldA) gene, complete cds; benzylalcohol dehydrogenase homolog (adhA) gene, partial cds; and unknown gene Length = 3352 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tcgccggagcggcggcggcc 74 |||||||||||||||||||| Sbjct: 1875 tcgccggagcggcggcggcc 1894
>dbj|AK166550.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched library, clone:I0C0016F01 product:TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, full insert sequence Length = 1927 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 1314 cctctgcccccacgacctct 1295
>emb|CR386397.1| Gallus gallus finished cDNA, clone ChEST236n8 Length = 1331 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cgccggagcggcggcggccg 75 |||||||||||||||||||| Sbjct: 6 cgccggagcggcggcggccg 25
>dbj|AK051568.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130057K06 product:TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68 kDa, full insert sequence Length = 2050 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 1322 cctctgcccccacgacctct 1303
>gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis thaliana chromosome 1, complete sequence Length = 87768 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 ggaaatcaaggagaaaatga 492 |||||||||||||||||||| Sbjct: 86878 ggaaatcaaggagaaaatga 86897
>gb|AY773079.1| Streptomyces venezuelae JadF (jadF), JadG (jadG), and JadH (jadH) genes, complete cds Length = 3871 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccggagcggcggcggccgcc 77 |||||||||||||||||||| Sbjct: 1346 ccggagcggcggcggccgcc 1365
>gb|BC043716.1| Mus musculus TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, mRNA (cDNA clone IMAGE:5374512), with apparent retained intron Length = 1338 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 649 cctctgcccccacgacctct 630
>emb|BX931317.2| Gallus gallus finished cDNA, clone ChEST646g9 Length = 1249 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cgccggagcggcggcggccg 75 |||||||||||||||||||| Sbjct: 4 cgccggagcggcggcggccg 23
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 ccgcgacgtctgccgcctct 183 |||||||||||||||||||| Sbjct: 21163179 ccgcgacgtctgccgcctct 21163198
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 tctgcccccacgacctcttc 215 |||||||||||||||||||| Sbjct: 15820196 tctgcccccacgacctcttc 15820177
>emb|BX818032.1|CNS0ACIG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL57ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 734 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ggaaatcaaggagaaaatga 492 |||||||||||||||||||| Sbjct: 127 ggaaatcaaggagaaaatga 108
>gb|AE009741.1| Brucella melitensis 16M chromosome II, section 103 of 107 of the complete sequence Length = 12990 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 cccacgacctcttccagctc 221 |||||||||||||||||||| Sbjct: 8517 cccacgacctcttccagctc 8536
>gb|AC069144.9|AC069144 Arabidopsis thaliana chromosome 1 BAC F14C21 genomic sequence, complete sequence Length = 102135 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ggaaatcaaggagaaaatga 492 |||||||||||||||||||| Sbjct: 86763 ggaaatcaaggagaaaatga 86744
>dbj|AB010067.2| Homo sapiens RBP56/hTAFII68 gene, complete cds Length = 10194 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 8471 cctctgcccccacgacctct 8452
>dbj|AB060882.1| Macaca fascicularis brain cDNA clone:QtrA-12728, similar to human TBP-associated factor 15 (TAF15) isoform 2, mRNA, NM_003487.2 Length = 2040 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 1491 cctctgcccccacgacctct 1472
>gb|BT004947.1| Arabidopsis thaliana clone U20533 unknown protein (At1g54860) mRNA, complete cds Length = 634 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ggaaatcaaggagaaaatga 492 |||||||||||||||||||| Sbjct: 69 ggaaatcaaggagaaaatga 50
>gb|BT003824.1| Arabidopsis thaliana clone RAFL15-22-O14 (R20533) unknown protein (At1g54860) mRNA, complete cds Length = 812 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ggaaatcaaggagaaaatga 492 |||||||||||||||||||| Sbjct: 156 ggaaatcaaggagaaaatga 137
>gb|AY119788.1| Mus musculus SMAD4 (Smad4) gene, complete cds Length = 58218 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 ataaaatcaagaccatggag 551 |||||||||||||||||||| Sbjct: 49453 ataaaatcaagaccatggag 49472
>gb|AY085470.1| Arabidopsis thaliana clone 1530 mRNA, complete sequence Length = 803 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ggaaatcaaggagaaaatga 492 |||||||||||||||||||| Sbjct: 200 ggaaatcaaggagaaaatga 181
>ref|XM_237792.3| PREDICTED: Rattus norvegicus TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor (predicted) (Taf15_predicted), mRNA Length = 1536 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 1250 cctctgcccccacgacctct 1231
>gb|AY197697.1| Homo sapiens TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa (TAF15) gene, complete cds Length = 40986 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 37015 cctctgcccccacgacctct 36996
>gb|AC064840.2|AC064840 Arabidopsis thaliana chromosome I BAC T24C10 genomic sequence, complete sequence Length = 77923 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 ggaaatcaaggagaaaatga 492 |||||||||||||||||||| Sbjct: 7636 ggaaatcaaggagaaaatga 7655
>gb|AF269984.1|AF269984 Staphylococcus epidermidis strain SR1 clone step.1038f06 genomic sequence Length = 3226 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 483 gagaaaatgaaagaagctgatatc 506 ||||||||||||||||| |||||| Sbjct: 2630 gagaaaatgaaagaagcagatatc 2607
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 ctcgccggagcggcggcggc 73 |||||||||||||||||||| Sbjct: 2883983 ctcgccggagcggcggcggc 2883964
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 cccacgacctcttccagctc 221 |||||||||||||||||||| Sbjct: 133153 cccacgacctcttccagctc 133134
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 acgtctgccgcctcttcctcgccg 192 ||||| |||||||||||||||||| Sbjct: 67504 acgtccgccgcctcttcctcgccg 67481
>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0027N13 Length = 179669 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 tctgcccccacgacctcttc 215 |||||||||||||||||||| Sbjct: 59710 tctgcccccacgacctcttc 59691
>dbj|AK101282.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033D05, full insert sequence Length = 1419 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 tctgcccccacgacctcttc 215 |||||||||||||||||||| Sbjct: 215 tctgcccccacgacctcttc 234
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 tcaaccgcaagtacttcgac 164 |||||||||||||||||||| Sbjct: 2105167 tcaaccgcaagtacttcgac 2105186
>dbj|AK064672.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-E05, full insert sequence Length = 833 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 ccgcgacgtctgccgcctct 183 |||||||||||||||||||| Sbjct: 367 ccgcgacgtctgccgcctct 386
>dbj|AK063477.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-B04, full insert sequence Length = 2160 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 tctgcccccacgacctcttc 215 |||||||||||||||||||| Sbjct: 213 tctgcccccacgacctcttc 232
>dbj|AK058749.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H07, full insert sequence Length = 1331 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 acgtctgccgcctcttcctcgccg 192 ||||| |||||||||||||||||| Sbjct: 336 acgtccgccgcctcttcctcgccg 313
>gb|U28382.1|SVU28382 Streptomyces venezuelae bifunctional cyclase/dehydrase gene, partial cds; C-16 hydroxylase gene, complete cds; and C-5 anthrone oxidase gene, partial cds Length = 2244 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccggagcggcggcggccgcc 77 |||||||||||||||||||| Sbjct: 1725 ccggagcggcggcggccgcc 1744
>gb|AC163707.3| Gallus gallus BAC clone CH261-71N11 from chromosome ul, complete sequence Length = 174599 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gccggagcggcggcggccgc 76 |||||||||||||||||||| Sbjct: 64390 gccggagcggcggcggccgc 64371
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cgccggagcggcggcggccg 75 |||||||||||||||||||| Sbjct: 1975569 cgccggagcggcggcggccg 1975588
>dbj|D10983.1|RICANT2 Oryza sativa (japonica cultivar-group) cDNA, clone:Osc6 abundantly expressed at microspore stage Length = 807 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 ccgcgacgtctgccgcctct 183 |||||||||||||||||||| Sbjct: 345 ccgcgacgtctgccgcctct 364
>gb|U51334.1|HSU51334 Human putative RNA binding protein (RBP56) mRNA, complete cds Length = 2153 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 1321 cctctgcccccacgacctct 1302
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 ggagaaaatgaaagaagctg 501 |||||||||||||||||||| Sbjct: 1831961 ggagaaaatgaaagaagctg 1831980
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 ccgcgacgtctgccgcctct 183 |||||||||||||||||||| Sbjct: 21473420 ccgcgacgtctgccgcctct 21473439
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 cccacgacctcttccagctc 221 |||||||||||||||||||| Sbjct: 133216 cccacgacctcttccagctc 133197
>ref|NM_139215.1| Homo sapiens TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa (TAF15), transcript variant 1, mRNA Length = 2153 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 1321 cctctgcccccacgacctct 1302
>ref|NM_003487.2| Homo sapiens TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa (TAF15), transcript variant 2, mRNA Length = 2166 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 1312 cctctgcccccacgacctct 1293
>emb|AL807402.1|CNS08CA6 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 437H9 of library RPCI-23 from chromosome 11 of strain C57Bl/6 of Mus musculus (mouse) Length = 205701 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctctgcccccacgacctct 213 |||||||||||||||||||| Sbjct: 146568 cctctgcccccacgacctct 146549
>emb|AL133305.3|CNS01DUO Human chromosome 14 DNA sequence BAC R-66M11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 159524 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 ggaagaactaagatctaaaa 576 |||||||||||||||||||| Sbjct: 82234 ggaagaactaagatctaaaa 82253
>dbj|D21160.1|RICASP2 Rice Osg6B gene for anther specific protein, complete cds (exon1, exon2, exon3) Length = 3640 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 ccgcgacgtctgccgcctct 183 |||||||||||||||||||| Sbjct: 1995 ccgcgacgtctgccgcctct 2014 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,016,986 Number of Sequences: 3902068 Number of extensions: 5016986 Number of successful extensions: 107865 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106205 Number of HSP's gapped (non-prelim): 1648 length of query: 622 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 599 effective length of database: 17,143,297,704 effective search space: 10268835324696 effective search space used: 10268835324696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
