ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags23g17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (T... 168 2e-38
2emb|X66013.1|TACATHBG T.aestivum gene for cathepsin B (Al16) 137 5e-29
3gb|AF490468.1| Hordeum vulgare subsp. vulgare cultivar Morex CON... 119 1e-23
4dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox ... 113 8e-22
5dbj|AB182945.1| Triticum aestivum Wknox1d gene for KN1 homeobox ... 101 3e-18
6gb|AF490467.1| Hordeum vulgare subsp. vulgare cultivar Igri CONS... 94 7e-16
7gb|DQ257593.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB fl... 82 3e-12
8gb|DQ175915.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB fl... 82 3e-12
9emb|AJ841698.1| Poa pratensis serk1 gene for somatic embryogenes... 72 3e-09
10emb|AJ841697.1| Poa pratensis serk2 gene for somatic embryogenes... 64 7e-07
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
12dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
13gb|AY821693.1| Australopyrum velutinum beta amylase gene, partia... 48 0.039
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.039
15gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genom... 48 0.039
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.039
17gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, geno... 46 0.15
18dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
19dbj|AK072811.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.15
20dbj|AP005160.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
21gb|AC004979.1| Homo sapiens PAC clone RP5-1154E9 from 7, complet... 44 0.61
22gb|AC022360.23| Homo sapiens 8 BAC RP11-58O3 (Roswell Park Cance... 44 0.61
23gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, co... 44 0.61
24ref|NM_101012.3| Arabidopsis thaliana unknown protein AT1G11390 ... 42 2.4
25gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 42 2.4
26gb|AC157549.4| Mus musculus chromosome 8, clone RP24-374O12, com... 42 2.4
27emb|CR376856.9| Zebrafish DNA sequence from clone CH211-11O22 in... 42 2.4
28gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 42 2.4
29ref|XM_686049.1| PREDICTED: Danio rerio similar to ubiquitin-act... 42 2.4
30dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
32gb|AC011661.5|AC011661 Genomic sequence for Arabidopsis thaliana... 42 2.4
33gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic prote... 42 2.4
34dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
35emb|BX005146.4| Zebrafish DNA sequence from clone CH211-152N19 i... 42 2.4
36dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
37dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
38gb|AC166241.7| Mus musculus chromosome 8, clone RP23-125A7, comp... 42 2.4
39dbj|AP000902.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 2.4
40gb|AY821692.1| Australopyrum retrofractum beta amylase gene, par... 40 9.5
41gb|AC164878.2| Mus musculus BAC clone RP23-364G24 from chromosom... 40 9.5
42ref|XM_630041.1| Dictyostelium discoideum hypothetical protein (... 40 9.5
43gb|AC165307.6| Mus musculus chromosome 3, clone RP24-372I24, com... 40 9.5
44gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complet... 40 9.5
45gb|DQ469712.1| Hordeum vulgare subsp. vulgare serine/threonine k... 40 9.5
46emb|CR381632.8| Zebrafish DNA sequence from clone DKEY-265M15 in... 40 9.5
47gb|AC098705.2| Mus musculus BAC clone RP23-1B19 from 3, complete... 40 9.5
48gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete ... 40 9.5
49emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 i... 40 9.5
50emb|AL672043.15| Human DNA sequence from clone RP11-322N21 on ch... 40 9.5
51emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on ch... 40 9.5
52emb|AL390252.9| Human DNA sequence from clone RP11-297O4 on chro... 40 9.5
53emb|AL359197.20| Human DNA sequence from clone RP11-498I18 on ch... 40 9.5
54emb|AL357623.14| Human DNA sequence from clone RP11-342E24 on ch... 40 9.5
55emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4,... 40 9.5
56emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4,... 40 9.5
57emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,... 40 9.5
58emb|AJ639871.1| Macrotis lagotis mitochondrion (partial) 40 9.5
59gb|AC183530.3| Pan troglodytes BAC clone CH251-653K11 from chrom... 40 9.5
60gb|U55370.1| Caenorhabditis elegans cosmid K03B4, complete sequence 40 9.5
61tpg|BK003727.1| TPA: TPA_inf: Drosophila melanogaster HDC05820 (... 40 9.5
62gb|AC067981.6| Homo sapiens chromosome 18, clone RP11-805E19, co... 40 9.5
63gb|AC113137.2| Homo sapiens chromosome 18, clone RP11-622J9, com... 40 9.5
64gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete ... 40 9.5
65gb|AC040918.7| Homo sapiens chromosome 15, clone RP11-684B21, co... 40 9.5
66gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99)... 40 9.5
67ref|NM_071861.3| Caenorhabditis elegans K03B4.2 (K03B4.2) mRNA, ... 40 9.5
68dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
69dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
70gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
71gb|AC007473.10|AC007473 Drosophila melanogaster, chromosome 2R, ... 40 9.5
72gb|AC074117.7| Homo sapiens BAC clone RP11-413M20 from 2, comple... 40 9.5
73gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 40 9.5
74dbj|AP004696.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
75gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156... 40 9.5
76dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
77dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
78emb|BX004837.9| Zebrafish DNA sequence from clone CH211-134F7 in... 40 9.5
79emb|BX511200.2|RN52A6 Rattus norvegicus chromosome 1 BAC RP32-52... 40 9.5
80dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
81dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
82dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
83gb|AC121247.2| Homo sapiens chromosome 3 clone RP11-3B7, complet... 40 9.5
84emb|CR382336.11| Zebrafish DNA sequence from clone CH211-125A6 i... 40 9.5
85gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25... 40 9.5
86emb|BX322614.3| Zebrafish DNA sequence from clone CH211-215G1 in... 40 9.5
87emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4,... 40 9.5
88gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds 40 9.5
89emb|AL807800.7| Mouse DNA sequence from clone RP23-438D2 on chro... 40 9.5
90dbj|AB028931.1| Adiantum capillus-veneris CRY5 gene for blue lig... 40 9.5
91dbj|AB028929.1| Adiantum capillus-veneris CRY5 mRNA for blue lig... 40 9.5
92dbj|AP005262.3| Homo sapiens genomic DNA, chromosome 18 clone:CT... 40 9.5

>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14)
             genes, complete cds; and unknown gene
          Length = 43606

 Score =  168 bits (85), Expect = 2e-38
 Identities = 140/157 (89%), Gaps = 1/157 (0%)
 Strand = Plus / Plus

                                                                         
Query: 269   tactccctcggttcacaaatataagatgttctaacttttttgtgaagtagatgtatatag 328
             ||||||||| ||||||||||||||||||||||||||||||| |||    |||||||||||
Sbjct: 40275 tactccctccgttcacaaatataagatgttctaacttttttctgattcggatgtatatag 40334

                                                                         
Query: 329   acatgctttagtgtgtttgttcactcattccagtccgtatgtagtccatattgaaatatc 388
             ||    ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 40335 acgcattttag-gtgtttgttcactcatttcagtctgtatgtagtccatattgaaatatc 40393

                                                  
Query: 389   gaaaacatcctatattagtgaacggagggagtacata 425
              |||||||| |||||| | ||||||||||||||||||
Sbjct: 40394 caaaacatcttatatttgggaacggagggagtacata 40430



 Score =  129 bits (65), Expect = 1e-26
 Identities = 74/77 (96%)
 Strand = Plus / Plus

                                                                         
Query: 615   gtgtttgttcactcatgtcagtccgtatgtagtccatattgaaatatccaaaacatctta 674
             |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 40346 gtgtttgttcactcatttcagtctgtatgtagtccatattgaaatatccaaaacatctta 40405

                              
Query: 675   tatttgtgaacggaggg 691
             |||||| ||||||||||
Sbjct: 40406 tatttgggaacggaggg 40422



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 666   aacatcttatatttgtgaacggaggg 691
             ||||||||||||||||||||||||||
Sbjct: 40304 aacatcttatatttgtgaacggaggg 40279



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 392   aacatcctatattagtgaacggagggagtacat 424
             |||||| |||||| |||||||||||||||||||
Sbjct: 40304 aacatcttatatttgtgaacggagggagtacat 40272



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 269   tactccctcggttcacaaatataagatgtt 298
             ||||||||| |||| |||||||||||||||
Sbjct: 40426 tactccctccgttcccaaatataagatgtt 40397



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>emb|X66013.1|TACATHBG T.aestivum gene for cathepsin B (Al16)
          Length = 4792

 Score =  137 bits (69), Expect = 5e-29
 Identities = 130/149 (87%), Gaps = 1/149 (0%)
 Strand = Plus / Plus

                                                                        
Query: 274  cctcggttcacaaatataagatgttctaacttttttgtgaagtagatgtatatagacatg 333
            |||| |||||| | |||||||||||||||||||||| | || | ||||||| |||||| |
Sbjct: 2848 cctctgttcactattataagatgttctaacttttttctaaattggatgtatgtagacacg 2907

                                                                        
Query: 334  ctttagtgtgtttgttc-actcattccagtccgtatgtagtccatattgaaatatcgaaa 392
             |||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 2908 ttttagtgtgtttgttccactcatttcagtccgtatgtagtccatattgaaatatccaaa 2967

                                         
Query: 393  acatcctatattagtgaacggagggagta 421
            |  || |||| ||||| | ||||||||||
Sbjct: 2968 atgtcgtataatagtggatggagggagta 2996



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 65/69 (94%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                        
Query: 600  tagacatgtttcagtgtgtttgttc-actcatgtcagtccgtatgtagtccatattgaaa 658
            |||||| |||| ||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 2900 tagacacgttttagtgtgtttgttccactcatttcagtccgtatgtagtccatattgaaa 2959

                     
Query: 659  tatccaaaa 667
            |||||||||
Sbjct: 2960 tatccaaaa 2968



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>gb|AF490468.1| Hordeum vulgare subsp. vulgare cultivar Morex CONSTANS-like protein
           (CO1) gene, complete cds
          Length = 4071

 Score =  119 bits (60), Expect = 1e-23
 Identities = 75/80 (93%)
 Strand = Plus / Minus

                                                                       
Query: 612 agtgtgtttgttcactcatgtcagtccgtatgtagtccatattgaaatatccaaaacatc 671
           |||||||||||||||| || ||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 110 agtgtgtttgttcacttatttcagtccgtatgtagtccacattaaaatatctaaaacatc 51

                               
Query: 672 ttatatttgtgaacggaggg 691
           ||||||||||||||||||||
Sbjct: 50  ttatatttgtgaacggaggg 31



 Score =  117 bits (59), Expect = 5e-23
 Identities = 80/87 (91%)
 Strand = Plus / Minus

                                                                       
Query: 335 tttagtgtgtttgttcactcattccagtccgtatgtagtccatattgaaatatcgaaaac 394
           ||||||||||||||||||| ||| |||||||||||||||||| ||| ||||||| |||||
Sbjct: 113 tttagtgtgtttgttcacttatttcagtccgtatgtagtccacattaaaatatctaaaac 54

                                      
Query: 395 atcctatattagtgaacggagggagta 421
           ||| |||||| ||||||||||||||||
Sbjct: 53  atcttatatttgtgaacggagggagta 27



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 130/154 (84%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                        
Query: 269  tactccctcggttcacaaatataagatgttctaacttttttgtgaagtagatgtatatag 328
            |||||| || |||||| | |||||||||||||||| ||||  || | | |||||||||||
Sbjct: 3051 tactccttccgttcactattataagatgttctaaccttttcctg-attggatgtatatag 2993

                                                                        
Query: 329  -acatgctttagtgtgtttgttcactcattccagtccgtatgtagtccatattgaaatat 387
              |||  |||||||||||||||| |||||| | |||| |||||||||||| |||||||||
Sbjct: 2992 cgcat--tttagtgtgtttgttcgctcatttcggtccttatgtagtccatcttgaaatat 2935

                                              
Query: 388  cgaaaacatcctatattagtgaacggagggagta 421
            | ||||| || |||| ||||||| ||||||||||
Sbjct: 2934 ccaaaacgtcttataatagtgaatggagggagta 2901



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                        
Query: 612  agtgtgtttgttcactcatgtcagtccgtatgtagtccatattgaaatatccaaaacatc 671
            ||||||||||||| ||||| || |||| |||||||||||| |||||||||||||||| ||
Sbjct: 2984 agtgtgtttgttcgctcatttcggtccttatgtagtccatcttgaaatatccaaaacgtc 2925

                                
Query: 672  ttatatttgtgaacggaggg 691
            ||||| | ||||| ||||||
Sbjct: 2924 ttataatagtgaatggaggg 2905



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 269 tactccctcggttcacaaatataagatgtt 298
           ||||||||| ||||||||||||||||||||
Sbjct: 27  tactccctccgttcacaaatataagatgtt 56



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 664 aaaacatcttatatttgtgaacggaggg 691
           |||||||||||||| |||| ||||||||
Sbjct: 147 aaaacatcttatatctgtggacggaggg 174



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>dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox protein, complete cds
          Length = 9755

 Score =  113 bits (57), Expect = 8e-22
 Identities = 103/117 (88%), Gaps = 1/117 (0%)
 Strand = Plus / Plus

                                                                        
Query: 280  ttcacaaatataagatgttctaacttttttgtgaagtagatgtatatagacatgctttag 339
            ||||| ||||||||||||||||||||||  || || | ||||||||||| |||| |||||
Sbjct: 8576 ttcacgaatataagatgttctaacttttc-gttaattggatgtatataggcatgttttag 8634

                                                                     
Query: 340  tgtgtttgttcactcattccagtccgtatgtagtccatattgaaatatcgaaaacat 396
            ||||||||||||| |||| ||||| ||||||||| |||||| ||||||| |||||||
Sbjct: 8635 tgtgtttgttcacccatttcagtctgtatgtagtgcatattaaaatatccaaaacat 8691



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                        
Query: 596  tatatagacatgtttcagtgtgtttgttcactcatgtcagtccgtatgtagtccatattg 655
            ||||||| ||||||| ||||||||||||||| ||| |||||| ||||||||| |||||| 
Sbjct: 8617 tatataggcatgttttagtgtgtttgttcacccatttcagtctgtatgtagtgcatatta 8676

                           
Query: 656  aaatatccaaaacat 670
            |||||||||||||||
Sbjct: 8677 aaatatccaaaacat 8691



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>dbj|AB182945.1| Triticum aestivum Wknox1d gene for KN1 homeobox protein, complete cds
          Length = 9086

 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Plus

                                                                        
Query: 620  tgttcactcatgtcagtccgtatgtagtccatattgaaatatccaaaacatcttatattt 679
            ||||||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||
Sbjct: 7991 tgttcactcatttcagtccgtatgtagtccatactaaaatatccaaaacatattatattt 8050

                       
Query: 680  gtgaacggagg 690
            ||||| |||||
Sbjct: 8051 gtgaatggagg 8061



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 92/105 (87%), Gaps = 1/105 (0%)
 Strand = Plus / Plus

                                                                        
Query: 273  ccctcggttcacaaatataagatgttctaacttttttgtgaagtagatgtatatagacat 332
            ||||| |||| ||||||||||||||||||||||||  |||||  ||||||||||||||| 
Sbjct: 7888 ccctccgttcgcaaatataagatgttctaacttttc-gtgaatcagatgtatatagacac 7946

                                                         
Query: 333  gctttagtgtgtttgttcactcattccagtccgtatgtagtccat 377
              || |||||||||||||||||||| ||||  |||||||||||||
Sbjct: 7947 atttgagtgtgtttgttcactcatttcagtttgtatgtagtccat 7991



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                        
Query: 346  tgttcactcattccagtccgtatgtagtccatattgaaatatcgaaaacatcctatatta 405
            |||||||||||| |||||||||||||||||||| | ||||||| |||||||  |||||| 
Sbjct: 7991 tgttcactcatttcagtccgtatgtagtccatactaaaatatccaaaacatattatattt 8050

                            
Query: 406  gtgaacggagggagta 421
            ||||| ||||| ||||
Sbjct: 8051 gtgaatggaggtagta 8066



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                    
Query: 596  tatatagacatgtttcagtgtgtttgttcactcatgtcagtccgtatgtagtccat 651
            ||||||||||  ||| ||||||||||||||||||| |||||  |||||||||||||
Sbjct: 7936 tatatagacacatttgagtgtgtttgttcactcatttcagtttgtatgtagtccat 7991



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 666  aacatcttatatttgtgaacggaggg 691
            ||||||||||||||| ||||||||||
Sbjct: 7913 aacatcttatatttgcgaacggaggg 7888



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>gb|AF490467.1| Hordeum vulgare subsp. vulgare cultivar Igri CONSTANS-like protein
            (CO1) gene, complete cds
          Length = 2252

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 130/154 (84%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                        
Query: 269  tactccctcggttcacaaatataagatgttctaacttttttgtgaagtagatgtatatag 328
            |||||| || |||||| | |||||||||||||||| ||||  || | | |||||||||||
Sbjct: 1656 tactccttccgttcactattataagatgttctaaccttttcctg-attggatgtatatag 1598

                                                                        
Query: 329  -acatgctttagtgtgtttgttcactcattccagtccgtatgtagtccatattgaaatat 387
              |||  |||||||||||||||| |||||| | |||| |||||||||||| |||||||||
Sbjct: 1597 cgcat--tttagtgtgtttgttcgctcatttcggtccttatgtagtccatcttgaaatat 1540

                                              
Query: 388  cgaaaacatcctatattagtgaacggagggagta 421
            | ||||| || |||| ||||||| ||||||||||
Sbjct: 1539 ccaaaacgtcttataatagtgaatggagggagta 1506



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                        
Query: 612  agtgtgtttgttcactcatgtcagtccgtatgtagtccatattgaaatatccaaaacatc 671
            ||||||||||||| ||||| || |||| |||||||||||| |||||||||||||||| ||
Sbjct: 1589 agtgtgtttgttcgctcatttcggtccttatgtagtccatcttgaaatatccaaaacgtc 1530

                                
Query: 672  ttatatttgtgaacggaggg 691
            ||||| | ||||| ||||||
Sbjct: 1529 ttataatagtgaatggaggg 1510



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>gb|DQ257593.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB flanking T-DNA
           insertion sequence
          Length = 623

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 94/110 (85%), Gaps = 5/110 (4%)
 Strand = Plus / Minus

                                                                       
Query: 317 agatgtatatagacatgctttagtgtgtttgttcactcattccagtccgtatgta----g 372
           ||||||||||||||| | ||||||| |||||||||||| ||   |||||||||||    |
Sbjct: 351 agatgtatatagacacgttttagtgcgtttgttcactcgtt-tggtccgtatgtaggtgg 293

                                                             
Query: 373 tccatattgaaatatcgaaaacatcctatattagtgaacggagggagtac 422
           ||||||||||||| ||||||||||| |||||| | ||||||| |||||||
Sbjct: 292 tccatattgaaatgtcgaaaacatcttatatttgcgaacggatggagtac 243



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 83/97 (85%), Gaps = 5/97 (5%)
 Strand = Plus / Minus

                                                                       
Query: 596 tatatagacatgtttcagtgtgtttgttcactcatgtcagtccgtatgta----gtccat 651
           |||||||||| |||| |||| |||||||||||| | |  |||||||||||    ||||||
Sbjct: 346 tatatagacacgttttagtgcgtttgttcactcgt-ttggtccgtatgtaggtggtccat 288

                                                
Query: 652 attgaaatatccaaaacatcttatatttgtgaacgga 688
           |||||||| || ||||||||||||||||| |||||||
Sbjct: 287 attgaaatgtcgaaaacatcttatatttgcgaacgga 251



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>gb|DQ175915.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB flanking T-DNA
           insertion sequence
          Length = 664

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 94/110 (85%), Gaps = 5/110 (4%)
 Strand = Plus / Plus

                                                                       
Query: 317 agatgtatatagacatgctttagtgtgtttgttcactcattccagtccgtatgta----g 372
           ||||||||||||||| | ||||||| |||||||||||| ||   |||||||||||    |
Sbjct: 273 agatgtatatagacacgttttagtgcgtttgttcactcgtt-tggtccgtatgtaggtgg 331

                                                             
Query: 373 tccatattgaaatatcgaaaacatcctatattagtgaacggagggagtac 422
           ||||||||||||| ||||||||||| |||||| | ||||||| |||||||
Sbjct: 332 tccatattgaaatgtcgaaaacatcttatatttgcgaacggatggagtac 381



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 83/97 (85%), Gaps = 5/97 (5%)
 Strand = Plus / Plus

                                                                       
Query: 596 tatatagacatgtttcagtgtgtttgttcactcatgtcagtccgtatgta----gtccat 651
           |||||||||| |||| |||| |||||||||||| | |  |||||||||||    ||||||
Sbjct: 278 tatatagacacgttttagtgcgtttgttcactcgt-ttggtccgtatgtaggtggtccat 336

                                                
Query: 652 attgaaatatccaaaacatcttatatttgtgaacgga 688
           |||||||| || ||||||||||||||||| |||||||
Sbjct: 337 attgaaatgtcgaaaacatcttatatttgcgaacgga 373



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>emb|AJ841698.1| Poa pratensis serk1 gene for somatic embryogenesis receptor-like
           kinase 1, exons 1-11, allele 1
          Length = 5188

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                       
Query: 600 tagacatgtttcagtgtgtttgttcactcatgtcagtccgtatgtagtccatattgaaat 659
           ||||| |||||||||||||  |||||||| | ||||||| ||||||||| | ||||||||
Sbjct: 615 tagacgtgtttcagtgtgtaggttcactcttttcagtccatatgtagtctacattgaaat 674

                                           
Query: 660 atccaaaacatcttatatttgtgaacggaggg 691
           ||  ||||||||| ||| ||  ||||||||||
Sbjct: 675 attgaaaacatctcataatttggaacggaggg 706



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 85/103 (82%)
 Strand = Plus / Plus

                                                                       
Query: 319 atgtatatagacatgctttagtgtgtttgttcactcattccagtccgtatgtagtccata 378
           |||||| ||||| || || |||||||  |||||||| || |||||| ||||||||| | |
Sbjct: 608 atgtatctagacgtgtttcagtgtgtaggttcactcttttcagtccatatgtagtctaca 667

                                                      
Query: 379 ttgaaatatcgaaaacatcctatattagtgaacggagggagta 421
           ||||||||| |||||||||  ||| |   ||||||||||||||
Sbjct: 668 ttgaaatattgaaaacatctcataatttggaacggagggagta 710



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>emb|AJ841697.1| Poa pratensis serk2 gene for somatic embryogenesis receptor-like
           kinase 2, exons 1-11, allele 1
          Length = 5290

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 335 tttagtgtgtttgttcactcattccagtccgtatgtagtccatattgaaatatcgaaaac 394
           ||||||||||  |||||||| || |||| ||||||||||| | |||||||||||||||| 
Sbjct: 653 tttagtgtgtaggttcactcttttcagtgcgtatgtagtctacattgaaatatcgaaaat 712

                   
Query: 395 atcctata 402
           ||| ||||
Sbjct: 713 atcttata 720



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 612 agtgtgtttgttcactcatgtcagtccgtatgtagtccatattgaaatatccaaaacatc 671
           |||||||  |||||||| | ||||| ||||||||||| | ||||||||||| |||| |||
Sbjct: 656 agtgtgtaggttcactcttttcagtgcgtatgtagtctacattgaaatatcgaaaatatc 715

                
Query: 672 ttata 676
           |||||
Sbjct: 716 ttata 720



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                 
Query: 500      ggttgggtagttaagaagaaaaggcaaaagctt 532
                |||||||| ||||||||||||||||||||||||
Sbjct: 14736624 ggttgggtggttaagaagaaaaggcaaaagctt 14736656



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>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0707C02
          Length = 163609

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                              
Query: 500   ggttgggtagttaagaagaaaaggcaaaagctt 532
             |||||||| ||||||||||||||||||||||||
Sbjct: 22013 ggttgggtggttaagaagaaaaggcaaaagctt 22045



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>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway
            MITE, complete sequence
          Length = 1595

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 636  tccgtatgtagtccatattgaaatatccaaaacatcttatatttgtgaacggaggg 691
            ||||||||||||||||||| |||| || ||||   |||||||||  ||||||||||
Sbjct: 1275 tccgtatgtagtccatattcaaatctctaaaaagacttatatttaggaacggaggg 1220



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 362  tccgtatgtagtccatattgaaatatcgaaaacatcctatattagtgaacggagggagta 421
            ||||||||||||||||||| |||| || ||||   | ||||||   ||||||||||||||
Sbjct: 1275 tccgtatgtagtccatattcaaatctctaaaaagacttatatttaggaacggagggagta 1216



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 399      tatattagtgaacggagggagtac 422
                ||||||||||||||||||||||||
Sbjct: 24237610 tatattagtgaacggagggagtac 24237633



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 408      gaacggagggagtacataggagca 431
                |||||||||||||||| |||||||
Sbjct: 12028861 gaacggagggagtacacaggagca 12028838



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>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
              sequence
          Length = 171664

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 399    tatattagtgaacggagggagtac 422
              ||||||||||||||||||||||||
Sbjct: 143014 tatattagtgaacggagggagtac 142991



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 399      tatattagtgaacggagggagtac 422
                ||||||||||||||||||||||||
Sbjct: 24155079 tatattagtgaacggagggagtac 24155102



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 408      gaacggagggagtacataggagca 431
                |||||||||||||||| |||||||
Sbjct: 12025624 gaacggagggagtacacaggagca 12025601



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>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                          
Query: 317    agatgtatatagacatgctttagtgtgtttgttcactcattccagtccgtatgtagtcca 376
              ||||||||||||||||  ||||| ||||   ||||||||||    |||||||||||| ||
Sbjct: 173023 agatgtatatagacataatttagagtgtagattcactcattttgttccgtatgtagttca 172964

                         
Query: 377    tattgaaatat 387
              |||| ||||||
Sbjct: 172963 tattaaaatat 172953



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 335   tttagtgtgtttgttcactcatt 357
             |||||||||||||||||||||||
Sbjct: 36288 tttagtgtgtttgttcactcatt 36266



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 399     tatattagtgaacggagggagtacata 425
               |||||||||| ||||||||||||||||
Sbjct: 6604185 tatattagtggacggagggagtacata 6604159



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>dbj|AK072811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143E03, full
            insert sequence
          Length = 1888

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 399  tatattagtgaacggagggagtacata 425
            |||||||||| ||||||||||||||||
Sbjct: 1145 tatattagtggacggagggagtacata 1171



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>dbj|AP005160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0031C24
          Length = 194111

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 399    tatattagtgaacggagggagtacata 425
              |||||||||| ||||||||||||||||
Sbjct: 116279 tatattagtggacggagggagtacata 116253



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>gb|AC004979.1| Homo sapiens PAC clone RP5-1154E9 from 7, complete sequence
          Length = 82419

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 233   caaatttactgaagcaaagtta 254
             ||||||||||||||||||||||
Sbjct: 53855 caaatttactgaagcaaagtta 53834



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>gb|AC022360.23| Homo sapiens 8 BAC RP11-58O3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 171991

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 139   tgcaaatatatctttaagacgt 160
             ||||||||||||||||||||||
Sbjct: 99179 tgcaaatatatctttaagacgt 99158



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>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds
          Length = 11462

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 362  tccgtatgtagtccatattgaaatatcgaaaacatcctatattagtgaacggagggagta 421
            ||||||||||||||||| || ||| |||||||   | ||||||   ||||||||||||||
Sbjct: 3601 tccgtatgtagtccatagtggaatgtcgaaaaagacttatatttaggaacggagggagta 3660

              
Query: 422  ca 423
            ||
Sbjct: 3661 ca 3662



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 636  tccgtatgtagtccatattgaaatatccaaaacatcttatatttgtgaacggaggg 691
            ||||||||||||||||| || ||| || ||||   |||||||||  ||||||||||
Sbjct: 3601 tccgtatgtagtccatagtggaatgtcgaaaaagacttatatttaggaacggaggg 3656



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>ref|NM_101012.3| Arabidopsis thaliana unknown protein AT1G11390 mRNA, complete cds
          Length = 2371

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 603  acatgtttcagtgtgtttgttcact 627
            |||||||||||||| ||||||||||
Sbjct: 2342 acatgtttcagtgtttttgttcact 2318



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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                               
Query: 640    tatgtagtccatattgaaatatccaaaacatcttatatttgtgaacgga 688
              |||||||||||||||||||| || ||||   |||||||||  |||||||
Sbjct: 260213 tatgtagtccatattgaaatctctaaaaagacttatatttaggaacgga 260165



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 636    tccgtatgtagtccatattgaaatatccaaaa 667
              ||||||||||||| ||||| ||||||| ||||
Sbjct: 336123 tccgtatgtagtctatattaaaatatctaaaa 336092



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 362    tccgtatgtagtccatattgaaatatcgaaaa 393
              ||||||||||||| ||||| ||||||| ||||
Sbjct: 336123 tccgtatgtagtctatattaaaatatctaaaa 336092



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    tatgtagtccatattgaaat 385
              ||||||||||||||||||||
Sbjct: 260213 tatgtagtccatattgaaat 260194



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>gb|AC157549.4| Mus musculus chromosome 8, clone RP24-374O12, complete sequence
          Length = 132933

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 603    acatgtttcagtgtgtttgtt 623
              |||||||||||||||||||||
Sbjct: 123912 acatgtttcagtgtgtttgtt 123892



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>emb|CR376856.9| Zebrafish DNA sequence from clone CH211-11O22 in linkage group 9,
              complete sequence
          Length = 179053

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 612    agtgtgtttgttcactcatgt 632
              |||||||||||||||||||||
Sbjct: 164391 agtgtgtttgttcactcatgt 164371



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>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 318 gatgtatatagacatgctttagtgtgtttgttcactcattccagtccgtatgtagtc 374
           ||||||||||||||| |||||| ||||   ||||||||||    |||||||||||||
Sbjct: 251 gatgtatatagacatactttagagtgtagattcactcattttgctccgtatgtagtc 195



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>ref|XM_686049.1| PREDICTED: Danio rerio similar to ubiquitin-activating enzyme
           E1-domain containing 1 isoform 1 (LOC562674), mRNA
          Length = 1067

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 466 ggaaatgatatctctaacact 486
           |||||||||||||||||||||
Sbjct: 927 ggaaatgatatctctaacact 947



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 266     aactactccctcggttcacaaatataagatgtt 298
               |||||||||||||||| | ||||||||| ||||
Sbjct: 6223122 aactactccctcggttaaaaaatataaggtgtt 6223154



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 399      tatattagtgaacggagggagtacatag 426
                |||||||| | |||||||||||||||||
Sbjct: 22751363 tatattaggggacggagggagtacatag 22751390



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 399      tatattagtgaacggagggagtac 422
                |||||||| |||||||||||||||
Sbjct: 11404804 tatattagggaacggagggagtac 11404827



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 266      aactactccctcggttcacaaatataaga 294
                |||||||||||| || |||||||||||||
Sbjct: 37622386 aactactccctctgtccacaaatataaga 37622358



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 410      acggagggagtacataggag 429
                ||||||||||||||||||||
Sbjct: 22547727 acggagggagtacataggag 22547708



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>gb|AC011661.5|AC011661 Genomic sequence for Arabidopsis thaliana BAC T23J18 from chromosome I,
             complete sequence
          Length = 84797

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 603   acatgtttcagtgtgtttgttcact 627
             |||||||||||||| ||||||||||
Sbjct: 19072 acatgtttcagtgtttttgttcact 19096



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>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast
             intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes,
             complete cds
          Length = 65979

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 317   agatgtatatagacatgctttagtgtgtttgttcactcatt 357
             |||||||||||||||| |||||  |||||  ||||||||||
Sbjct: 47385 agatgtatatagacatactttaaagtgttgattcactcatt 47345



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>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0677H08
          Length = 178830

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 266   aactactccctcggttcacaaatataaga 294
             |||||||||||| || |||||||||||||
Sbjct: 82860 aactactccctctgtccacaaatataaga 82832



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>emb|BX005146.4| Zebrafish DNA sequence from clone CH211-152N19 in linkage group 3,
              complete sequence
          Length = 180858

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 612    agtgtgtttgttcactcatgt 632
              |||||||||||||||||||||
Sbjct: 174039 agtgtgtttgttcactcatgt 174019



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>dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1734_E04
          Length = 101439

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 266  aactactccctcggttcacaaatataagatgtt 298
            |||||||||||||||| | ||||||||| ||||
Sbjct: 9259 aactactccctcggttaaaaaatataaggtgtt 9291



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>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_C05
          Length = 126112

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 266   aactactccctcggttcacaaatataagatgtt 298
             |||||||||||||||| | ||||||||| ||||
Sbjct: 86515 aactactccctcggttaaaaaatataaggtgtt 86547



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>gb|AC166241.7| Mus musculus chromosome 8, clone RP23-125A7, complete sequence
          Length = 208067

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 603    acatgtttcagtgtgtttgtt 623
              |||||||||||||||||||||
Sbjct: 184466 acatgtttcagtgtgtttgtt 184486



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>dbj|AP000902.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-692N5, complete
            sequences
          Length = 186626

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 639  gtatgtagtccatattgaaatatcc 663
            ||||||||| |||||||||||||||
Sbjct: 3984 gtatgtagtacatattgaaatatcc 3960



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 365  gtatgtagtccatattgaaatatc 388
            ||||||||| ||||||||||||||
Sbjct: 3984 gtatgtagtacatattgaaatatc 3961



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>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and
            Stowaway MITE, complete sequence
          Length = 1602

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 636  tccgtatgtagtccatattgaaatatccaaaacatcttatatttgtgaacggaggg 691
            |||||||||||| |||||| |||| || ||||   |||||||||  ||||||||||
Sbjct: 1281 tccgtatgtagtgcatattcaaatctctaaaaagacttatatttaggaacggaggg 1226



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>gb|AC164878.2| Mus musculus BAC clone RP23-364G24 from chromosome 13, complete sequence
          Length = 181893

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 492    tcttctgtggttgggtagtt 511
              ||||||||||||||||||||
Sbjct: 153522 tcttctgtggttgggtagtt 153503



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>ref|XM_630041.1| Dictyostelium discoideum hypothetical protein (DDB0183812), partial
            mRNA
          Length = 3198

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 149  tctttaagacgtatctagtttctttgtt 176
            |||||||||| ||||| |||||||||||
Sbjct: 2723 tctttaagacttatctcgtttctttgtt 2750



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>gb|AC165307.6| Mus musculus chromosome 3, clone RP24-372I24, complete sequence
          Length = 136853

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     acactgctactttgtgtgat 45
              ||||||||||||||||||||
Sbjct: 121818 acactgctactttgtgtgat 121799



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>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 318   gatgtatatagacatgctttagtgtgtttgttcactcatt 357
             ||||||||||||||| |||||| ||||   ||||||||||
Sbjct: 93833 gatgtatatagacatactttagagtgtagattcactcatt 93794



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>gb|DQ469712.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein
             ABC1036 gene, complete cds
          Length = 29663

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   atgtatatagacatgcttta 338
             ||||||||||||||||||||
Sbjct: 17184 atgtatatagacatgcttta 17165



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>emb|CR381632.8| Zebrafish DNA sequence from clone DKEY-265M15 in linkage group 3,
              complete sequence
          Length = 171119

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 603    acatgtttcagtgtgtttgt 622
              ||||||||||||||||||||
Sbjct: 136345 acatgtttcagtgtgtttgt 136326



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>gb|AC098705.2| Mus musculus BAC clone RP23-1B19 from 3, complete sequence
          Length = 202444

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    acactgctactttgtgtgat 45
             ||||||||||||||||||||
Sbjct: 58537 acactgctactttgtgtgat 58518



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>gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete sequence
          Length = 129921

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 397   cctatattagtgaacggagggagtacat 424
             |||||| |||||| ||||||||||||||
Sbjct: 95862 cctataatagtgaccggagggagtacat 95835



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>emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 in linkage group 13,
             complete sequence
          Length = 206656

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 518   aaaaggcaaaagcttctcttgtct 541
             |||||||||||| |||||||||||
Sbjct: 95317 aaaaggcaaaagtttctcttgtct 95340



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>emb|AL672043.15| Human DNA sequence from clone RP11-322N21 on chromosome 1 Contains a
            novel gene, the gene for  tetraspan 1 (TSPAN-1), gene
            FLJ20277 (FLJ31624) and the gene for a novel protein
            (FLJ25163), complete sequence
          Length = 87234

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  tcaagcaaatttactgaagc 247
            ||||||||||||||||||||
Sbjct: 3939 tcaagcaaatttactgaagc 3958



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>emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on chromosome 6, complete
             sequence
          Length = 113362

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 595   atatatagacatgtttcagt 614
             ||||||||||||||||||||
Sbjct: 80150 atatatagacatgtttcagt 80169



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>emb|AL390252.9| Human DNA sequence from clone RP11-297O4 on chromosome 1 Contains the
              CELSR2 gene for cadherin, EGF LAG seven-pass G-type
              receptor 2 (flamingo homolog, Drosophila), the gene for
              differential display and activated by p53 (DDA3), the gene
              for novel protein similar to Myosin-binding protein H
              (MyBP-H) (H-protein) (LOC343263), the SORT1 gene for
              sortilin 1 and the 3' end of the PSMA5 gene for proteasome
              (prosome, macropain) subunit, alpha type, 5, complete
              sequence
          Length = 169241

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    ttactgaagcaaagttacac 257
              ||||||||||||||||||||
Sbjct: 118692 ttactgaagcaaagttacac 118711



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>emb|AL359197.20| Human DNA sequence from clone RP11-498I18 on chromosome 1, complete
             sequence
          Length = 191686

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   ttttgtgaagtagatgtata 325
             ||||||||||||||||||||
Sbjct: 74727 ttttgtgaagtagatgtata 74746



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>emb|AL357623.14| Human DNA sequence from clone RP11-342E24 on chromosome 9 Contains part
             of the RALGPS1A gene for Ral guanine nucleotide exchange
             factor RalGPS1A (RALGEF2, KIAA0351), complete sequence
          Length = 39420

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   ctctaacactcaggctcttc 496
             ||||||||||||||||||||
Sbjct: 25796 ctctaacactcaggctcttc 25777



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>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02,
            complete sequence
          Length = 112404

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 398  ctatattagtgaacggagggagtacataggag 429
            ||||||||  ||||||||||||||||| ||||
Sbjct: 6385 ctatattatggaacggagggagtacatgggag 6354



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>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14,
             complete sequence
          Length = 158312

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 398   ctatattagtgaacggagggagtacataggag 429
             ||||||||  ||||||||||||||||| ||||
Sbjct: 99144 ctatattatggaacggagggagtacatgggag 99113



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>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 399   tatattagtgaacggagggagtac 422
             |||||||||| |||||||||||||
Sbjct: 13249 tatattagtggacggagggagtac 13226



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>emb|AJ639871.1| Macrotis lagotis mitochondrion (partial)
          Length = 15289

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   attaatttaatatttgagct 63
            ||||||||||||||||||||
Sbjct: 1570 attaatttaatatttgagct 1551



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>gb|AC183530.3| Pan troglodytes BAC clone CH251-653K11 from chromosome 1, complete
             sequence
          Length = 198127

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   ttactgaagcaaagttacac 257
             ||||||||||||||||||||
Sbjct: 63269 ttactgaagcaaagttacac 63288



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>gb|U55370.1| Caenorhabditis elegans cosmid K03B4, complete sequence
          Length = 32403

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 295   tgttctaacttttttgtgaagtag 318
             |||| |||||||||||||||||||
Sbjct: 23551 tgttataacttttttgtgaagtag 23574



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>tpg|BK003727.1| TPA: TPA_inf: Drosophila melanogaster HDC05820 (HDC05820) gene,
            complete cds
          Length = 4162

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 650  atattgaaatatccaaaaca 669
            ||||||||||||||||||||
Sbjct: 1772 atattgaaatatccaaaaca 1753



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>gb|AC067981.6| Homo sapiens chromosome 18, clone RP11-805E19, complete sequence
          Length = 158750

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   tttttgtgaagtagatgtat 324
             ||||||||||||||||||||
Sbjct: 46524 tttttgtgaagtagatgtat 46543



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>gb|AC113137.2| Homo sapiens chromosome 18, clone RP11-622J9, complete sequence
          Length = 167694

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   tttttgtgaagtagatgtat 324
             ||||||||||||||||||||
Sbjct: 46694 tttttgtgaagtagatgtat 46675



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>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
          Length = 102433

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 636   tccgtatgtagtccatattgaaatatccaaaacatcttatatttgtgaacggaggg 691
             ||||||||||||| ||| |||||| |  ||||  ||||||||||  ||||||||||
Sbjct: 66708 tccgtatgtagtctatagtgaaatttgtaaaaggtcttatatttaggaacggaggg 66763



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>gb|AC040918.7| Homo sapiens chromosome 15, clone RP11-684B21, complete sequence
          Length = 175919

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    tttgtatctacaactaaaat 218
              ||||||||||||||||||||
Sbjct: 136892 tttgtatctacaactaaaat 136911



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>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds
          Length = 12034

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 362  tccgtatgtagtccatattgaaatatcgaaaa 393
            ||||||||||||||||| || ||| |||||||
Sbjct: 3661 tccgtatgtagtccatagtggaatgtcgaaaa 3692



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>ref|NM_071861.3| Caenorhabditis elegans K03B4.2 (K03B4.2) mRNA, complete cds
          Length = 827

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 295 tgttctaacttttttgtgaagtag 318
           |||| |||||||||||||||||||
Sbjct: 547 tgttataacttttttgtgaagtag 570



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 399      tatattagtgaacggagggagtac 422
                |||||||||| |||||||||||||
Sbjct: 23570568 tatattagtggacggagggagtac 23570545



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 398      ctatattagtgaacggagggagtacataggag 429
                ||||||||  ||||||||||||||||| ||||
Sbjct: 20036481 ctatattatggaacggagggagtacatgggag 20036450



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 399     tatattagtgaacggagggagtac 422
               |||||||| |||||||||||||||
Sbjct: 5000824 tatattagggaacggagggagtac 5000801



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>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0052J20, complete sequence
          Length = 144969

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 408   gaacggagggagtacataggagca 431
             |||||||||||||||| |||||||
Sbjct: 49441 gaacggagggagtacacaggagca 49418



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>gb|AC007473.10|AC007473 Drosophila melanogaster, chromosome 2R, region 48A-48B, BAC clone
             BACR38D12, complete sequence
          Length = 171831

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 650   atattgaaatatccaaaaca 669
             ||||||||||||||||||||
Sbjct: 32801 atattgaaatatccaaaaca 32782



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>gb|AC074117.7| Homo sapiens BAC clone RP11-413M20 from 2, complete sequence
          Length = 195880

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 503   tgggtagttaagaagaaaag 522
             ||||||||||||||||||||
Sbjct: 59723 tgggtagttaagaagaaaag 59742



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>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 362  tccgtatgtagtccatattgaaatatcgaaaacatcctatattagtgaacggagggagta 421
            |||||||||||||| || |||||| || ||||   | |||||||  ||||||||||||||
Sbjct: 6258 tccgtatgtagtccttagtgaaatctctaaaatgacttatattatggaacggagggagta 6199



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>dbj|AP004696.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0475A09
          Length = 143417

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 399    tatattagtgaacggagggagtac 422
              |||||||| |||||||||||||||
Sbjct: 142409 tatattagggaacggagggagtac 142432



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>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence
          Length = 187012

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 390   aaaacatcctatattagtgaacggagggagta 421
             ||||||||||||||||  | ||||||||||||
Sbjct: 33471 aaaacatcctatattatgggacggagggagta 33440



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>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1097D05
          Length = 144879

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   acggagggagtacataggag 429
             ||||||||||||||||||||
Sbjct: 63464 acggagggagtacataggag 63445



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>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1172G12
          Length = 171974

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 399   tatattagtgaacggagggagtac 422
             |||||||| |||||||||||||||
Sbjct: 42938 tatattagggaacggagggagtac 42915



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>emb|BX004837.9| Zebrafish DNA sequence from clone CH211-134F7 in linkage group 19,
             complete sequence
          Length = 188325

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   tcaagcaaatttactgaagc 247
             ||||||||||||||||||||
Sbjct: 19777 tcaagcaaatttactgaagc 19796



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>emb|BX511200.2|RN52A6 Rattus norvegicus chromosome 1 BAC RP32-52A6, complete sequence
          Length = 150951

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   tttcccccataaaataccat 125
             ||||||||||||||||||||
Sbjct: 18366 tttcccccataaaataccat 18385



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>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1116H04
          Length = 140142

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 399   tatattagtgaacggagggagtacatag 426
             |||||||| | |||||||||||||||||
Sbjct: 78005 tatattaggggacggagggagtacatag 78032



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>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1111C03
          Length = 144879

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 399    tatattagtgaacggagggagtacatag 426
              |||||||| | |||||||||||||||||
Sbjct: 120157 tatattaggggacggagggagtacatag 120184



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>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1114E07
          Length = 135511

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 399   tatattagtgaacggagggagtac 422
             |||||||| |||||||||||||||
Sbjct: 18793 tatattagggaacggagggagtac 18816



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>gb|AC121247.2| Homo sapiens chromosome 3 clone RP11-3B7, complete sequence
          Length = 170787

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    aaatataagatgttctaact 304
              ||||||||||||||||||||
Sbjct: 136406 aaatataagatgttctaact 136425



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>emb|CR382336.11| Zebrafish DNA sequence from clone CH211-125A6 in linkage group 19,
              complete sequence
          Length = 175656

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 228    tcaagcaaatttactgaagc 247
              ||||||||||||||||||||
Sbjct: 171806 tcaagcaaatttactgaagc 171787



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>gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25 of 73 of the complete
              sequence
          Length = 261690

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 650    atattgaaatatccaaaaca 669
              ||||||||||||||||||||
Sbjct: 110974 atattgaaatatccaaaaca 110955



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>emb|BX322614.3| Zebrafish DNA sequence from clone CH211-215G1 in linkage group 16,
              complete sequence
          Length = 199783

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     tactttgtgtgattaattta 52
              ||||||||||||||||||||
Sbjct: 178145 tactttgtgtgattaattta 178164



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>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21,
              complete sequence
          Length = 139298

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 399    tatattagtgaacggagggagtac 422
              |||||||||| |||||||||||||
Sbjct: 126471 tatattagtggacggagggagtac 126448



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>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds
          Length = 3686

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 318  gatgtatatagacatgctttagtgtgtttgttcactcatt 357
            ||||||||||||||| |||||| ||||   ||||||||||
Sbjct: 2076 gatgtatatagacatactttagagtgtagattcactcatt 2115



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>emb|AL807800.7| Mouse DNA sequence from clone RP23-438D2 on chromosome 2, complete
              sequence
          Length = 176808

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 595    atatatagacatgtttcagt 614
              ||||||||||||||||||||
Sbjct: 138263 atatatagacatgtttcagt 138282



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>dbj|AB028931.1| Adiantum capillus-veneris CRY5 gene for blue light photoreceptor,
            complete cds
          Length = 3954

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 158  cgtatctagtttctttgttaaggt 181
            |||||||||||||||||| |||||
Sbjct: 2304 cgtatctagtttctttgtgaaggt 2327



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>dbj|AB028929.1| Adiantum capillus-veneris CRY5 mRNA for blue light photoreceptor,
            complete cds
          Length = 2828

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 158  cgtatctagtttctttgttaaggt 181
            |||||||||||||||||| |||||
Sbjct: 1423 cgtatctagtttctttgtgaaggt 1446



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>dbj|AP005262.3| Homo sapiens genomic DNA, chromosome 18 clone:CTD-2533G20, complete
             sequence
          Length = 113000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 325   atagacatgctttagtgtgt 344
             ||||||||||||||||||||
Sbjct: 98133 atagacatgctttagtgtgt 98152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,306,197
Number of Sequences: 3902068
Number of extensions: 7306197
Number of successful extensions: 162345
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 160601
Number of HSP's gapped (non-prelim): 1737
length of query: 691
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 668
effective length of database: 17,143,297,704
effective search space: 11451722866272
effective search space used: 11451722866272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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