ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags23g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105342.1| Oryza sativa (japonica cultivar-group) cDNA clon... 450 e-123
2gb|BT018673.1| Zea mays clone EL01N0510E07.d mRNA sequence 387 e-104
3gb|AY109381.1| Zea mays CL3204_1 mRNA sequence 232 1e-57
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 103 7e-19
5gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare str... 103 7e-19
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
7ref|NM_188090.1| Oryza sativa (japonica cultivar-group), Ozsa852... 94 7e-16
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 7e-13
9dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic D... 84 7e-13
10gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete se... 56 1e-04
11gb|AC144931.29| Medicago truncatula clone mth2-22b18, complete s... 56 1e-04
12gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete seq... 56 1e-04
13gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete se... 56 1e-04
14gb|AC158988.3| Mus musculus BAC clone RP23-393E16 from chromosom... 48 0.036
15gb|DQ459384.1| Nicotiana tabacum mitochondrial import receptor-l... 46 0.14
16gb|AC130657.9| Mus musculus chromosome 1, clone RP23-307H3, comp... 44 0.56
17ref|NM_112890.3| Arabidopsis thaliana TOM40; voltage-gated ion-s... 44 0.56
18gb|AC166973.5| Mus musculus chromosome 1, clone RP24-372J6, comp... 44 0.56
19gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 44 0.56
20gb|AY117216.1| Arabidopsis thaliana putative membrane import pro... 44 0.56
21gb|AY050925.1| Arabidopsis thaliana putative membrane import pro... 44 0.56
22emb|BX824823.1|CNS0A5JY Arabidopsis thaliana Full-length cDNA Co... 44 0.56
23emb|BX824118.1|CNS0A5LF Arabidopsis thaliana Full-length cDNA Co... 44 0.56
24emb|BX822251.1|CNS0A5UN Arabidopsis thaliana Full-length cDNA Co... 44 0.56
25emb|BX824709.1|CNS0A5IA Arabidopsis thaliana Full-length cDNA Co... 44 0.56
26gb|AC084575.1|CBRG39N14 Caenorhabditis briggsae cosmid G39N14, c... 44 0.56
27gb|AC116810.14| Mus musculus chromosome 1, clone RP24-355J5, com... 42 2.2
28gb|AC115484.2| Drosophila melanogaster clone BACR06K01, complete... 42 2.2
29ref|NM_001040324.1| Danio rerio zgc:136790 (zgc:136790), mRNA 42 2.2
30gb|BC053331.1| Mus musculus crumbs homolog 1 (Drosophila), mRNA ... 42 2.2
31ref|XM_801308.1| Trypanosoma cruzi strain CL Brener trans-sialid... 42 2.2
32ref|XM_811296.1| Trypanosoma cruzi strain CL Brener trans-sialid... 42 2.2
33emb|BX890603.17| Zebrafish DNA sequence from clone DKEYP-19G9 in... 42 2.2
34ref|XM_950357.1| Theileria annulata strain Ankara hypothetical p... 42 2.2
35gb|AF492496.1| Mus musculus crumbs-like protein 2 (Crb1) mRNA, c... 42 2.2
36gb|BC115269.1| Danio rerio cDNA clone MGC:136790 IMAGE:7053369, ... 42 2.2
37gb|AF406641.1|AF406641 Mus musculus crumbs-like protein 1 precur... 42 2.2
38dbj|AK164413.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 42 2.2
39gb|AC092399.2| Drosophila melanogaster, chromosome 2L, region 36... 42 2.2
40gb|BC031378.1| Mus musculus crumbs homolog 1 (Drosophila), mRNA ... 42 2.2
41gb|AE003649.2| Drosophila melanogaster chromosome 2L, section 58... 42 2.2
42emb|AL824711.14| Mouse DNA sequence from clone RP23-112I20 on ch... 42 2.2
43ref|NM_133239.1| Mus musculus crumbs homolog 1 (Drosophila) (Crb... 42 2.2
44emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on ch... 42 2.2
45ref|NM_190065.1| Oryza sativa (japonica cultivar-group), predic... 40 8.8
46gb|AC169698.1| Rhesus Macaque BAC CH250-254N3 (Children's Hospi... 40 8.8
47gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 8.8
48gb|AC129205.3| Mus musculus BAC clone RP24-235I5 from chromosome... 40 8.8
49ref|XM_454492.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E12067g ... 40 8.8
50gb|AC125055.3| Mus musculus BAC clone RP23-397L11 from chromosom... 40 8.8
51gb|AC125466.4| Mus musculus BAC clone RP23-477O24 from chromosom... 40 8.8
52gb|AC126928.3| Mus musculus BAC clone RP24-337I23 from chromosom... 40 8.8
53gb|AC005536.2| Homo sapiens BAC clone GS1-115E6 from 7, complete... 40 8.8
54emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 8.8
55dbj|AK156441.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 8.8
56gb|AC025280.5| Homo sapiens chromosome 16 clone RP11-254F19, com... 40 8.8
57gb|AC092341.5| Homo sapiens chromosome 16 clone RP11-260K13, com... 40 8.8
58gb|AC154767.2| Mus musculus BAC clone RP23-105P19 from chromosom... 40 8.8
59dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
60dbj|AK111027.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
61gb|AC003681.1|AC003681 Human PAC clone RP3-394A18 from 22q12.1-q... 40 8.8
62dbj|AK107422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
63dbj|AK107072.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
64dbj|AP000870.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.8
65gb|AC005187.1|AC005187 Homo sapiens chromosome 4 clone B153K6 ma... 40 8.8
66emb|Z81029.1|CEC01A2 Caenorhabditis elegans Cosmid C01A2, comple... 40 8.8
67gb|AC163437.16| Mus musculus chromosome 5, clone RP23-119I18, co... 40 8.8
68emb|AL627078.10| Mouse DNA sequence from clone RP23-138K13 on ch... 40 8.8 
>dbj|AK105342.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G11, full
           insert sequence
          Length = 1638

 Score =  450 bits (227), Expect = e-123
 Identities = 401/459 (87%)
 Strand = Plus / Plus

                                                                       
Query: 182 ggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgcga 241
           |||||||||||||||||||||||| || ||||||||||| | ||||||||||||||||||
Sbjct: 197 ggagaaggtggactacctcaacctcccctgccccgtgcccttcgaggagatccagcgcga 256

                                                                       
Query: 242 ggccctcatgtctttgaagcctgaactttttgaaggtttgaggtttgattttacaaagat 301
           |||||||||||| ||||| ||||||||||||||||| ||||||||||| || || ||   
Sbjct: 257 ggccctcatgtcgttgaaacctgaactttttgaaggattgaggtttgacttcactaaagg 316

                                                                       
Query: 302 gttaacccagaagtttgctcttagccatagtgtccttatgggctccctggaagttccatc 361
            ||||  ||||||||  | || ||||| |||||  ||||||| ||| | |||||||||||
Sbjct: 317 attaaatcagaagttctcactcagccacagtgtttttatgggttccttagaagttccatc 376

                                                                       
Query: 362 tcagtcagctgatgttataaaagtcccaacatcacagtatgaatttggtgccaacttttt 421
           ||||||| ||||   ||||||||| ||||||||||| || ||||| |||||||| ||| |
Sbjct: 377 tcagtcaactgaaactataaaagttccaacatcacattacgaattcggtgccaattttat 436

                                                                       
Query: 422 agatccaaagttaatgcttatcggaaggttgatgactgatggaaggctgaatgctcgtgt 481
           ||||||||||||||| ||| | |||||| ||||||| |||||||| ||||||||||||||
Sbjct: 437 agatccaaagttaattcttgtaggaagggtgatgacagatggaagactgaatgctcgtgt 496

                                                                       
Query: 482 gaaatgtgatctgacagagaatctcgcgctgaaaataaatgcgcagcttactagcgagcc 541
           ||||||||||||||||||  ||||  | |||||||||||||| |||||||||   |||||
Sbjct: 497 gaaatgtgatctgacagatgatcttactctgaaaataaatgcacagcttactcatgagcc 556

                                                                       
Query: 542 tcattactctcaagggatgttcaactttgactacaagggcacagactaccgagcacagtt 601
            |||||||| ||||| ||||| ||||||||||||||||| |||||||||||||| || ||
Sbjct: 557 gcattactcccaaggaatgtttaactttgactacaaggggacagactaccgagctcaatt 616

                                                  
Query: 602 tcaaattggaaataatgcgttctatggggcaaattatat 640
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tcaaattggaaataatgcgttctatggggcaaattatat 655
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>gb|BT018673.1| Zea mays clone EL01N0510E07.d mRNA sequence
          Length = 1429

 Score =  387 bits (195), Expect = e-104
 Identities = 444/527 (84%)
 Strand = Plus / Plus

                                                                       
Query: 114 gcgccgccgtatgggcatgggctcgccggcatcctccctccgaagtcggatggggatgat 173
           |||||||| || ||||  ||||||||||| |||||||| | || |||| | ||||| || 
Sbjct: 110 gcgccgccctacgggcccgggctcgccgggatcctcccgcagatgtcgaagggggaggag 169

                                                                       
Query: 174 aagaaggaggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatc 233
           |||||||| ||||||||||||||||||||||| || ||||||||||| | ||||||||||
Sbjct: 170 aagaaggatgagaaggtggactacctcaacctcccctgccccgtgcccttcgaggagatc 229

                                                                       
Query: 234 cagcgcgaggccctcatgtctttgaagcctgaactttttgaaggtttgaggtttgatttt 293
           ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||  || 
Sbjct: 230 cagcgcgaggctctcatgtctttgaagcctgaactttttgaaggattgagatttgtcttc 289

                                                                       
Query: 294 acaaagatgttaacccagaagtttgctcttagccatagtgtccttatgggctccctggaa 353
           |||||    || |  ||||||||| |||||||||| ||  |  ||||||||||| | |||
Sbjct: 290 acaaaaggattgaatcagaagttttctcttagccacagcatttttatgggctccttagaa 349

                                                                       
Query: 354 gttccatctcagtcagctgatgttataaaagtcccaacatcacagtatgaatttggtgcc 413
           |||||| | ||| || ||||   ||| ||||| |||||  |||| ||||||||||| |||
Sbjct: 350 gttccagcccaggcatctgaaactattaaagttccaactgcacattatgaatttggcgcc 409

                                                                       
Query: 414 aactttttagatccaaagttaatgcttatcggaaggttgatgactgatggaaggctgaat 473
           || ||||||||||||||||||||||| || |||||| ||||||| ||||||||||| |||
Sbjct: 410 aattttttagatccaaagttaatgctcattggaagggtgatgacagatggaaggcttaat 469

                                                                       
Query: 474 gctcgtgtgaaatgtgatctgacagagaatctcgcgctgaaaataaatgcgcagcttact 533
           |||||||||||||||||| ||||||| |||||  || ||||| ||||||| |||||||| 
Sbjct: 470 gctcgtgtgaaatgtgatttgacagacaatctgacgttgaaagtaaatgcacagcttacc 529

                                                                       
Query: 534 agcgagcctcattactctcaagggatgttcaactttgactacaagggcacagactaccga 593
              ||| | |||||||| ||||||||||| ||||| ||||||||||| |  ||||| |||
Sbjct: 530 caagaggcacattactcacaagggatgtttaacttcgactacaagggaagtgactatcga 589

                                                          
Query: 594 gcacagtttcaaattggaaataatgcgttctatggggcaaattatat 640
           ||||| || |||||||| || ||||| |||||||| |||||||||||
Sbjct: 590 gcacaattccaaattgggaacaatgcattctatggtgcaaattatat 636
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>gb|AY109381.1| Zea mays CL3204_1 mRNA sequence
          Length = 1476

 Score =  232 bits (117), Expect = 1e-57
 Identities = 340/417 (81%), Gaps = 1/417 (0%)
 Strand = Plus / Minus

                                                                        
Query: 224  cgaggagatccagcgcgaggccctcatgtctttgaagcctgaactttttgaaggtttgag 283
            ||||||||||||||||||||| ||||||||||||||||||||||     ||||| |||||
Sbjct: 1238 cgaggagatccagcgcgaggctctcatgtctttgaagcctgaacnnnnngaaggattgag 1179

                                                                        
Query: 284  gtttgattttacaaagatgttaacccagaagtttgctcttagccatagtgtccttatggg 343
            |||||| || |||||    || |  || |||||| |||||||||| ||     |||||||
Sbjct: 1178 gtttgacttcacaaaaggattgaatcaaaagttttctcttagccacagcanttttatggg 1119

                                                                        
Query: 344  ctccctggaagttccatctcagtcagctgatgttataaaagtcccaacatcacagtatga 403
            |||| | ||||||||| | ||| || ||||   ||| ||||| |||||  |||| |||||
Sbjct: 1118 ctccttagaagttccagcccaggcatctgaaactattaaagttccaactgcacattatga 1059

                                                                        
Query: 404  atttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgactgatgg 463
             ||||| |||||      |||||||||||||||||| || |||||| ||||||| |||||
Sbjct: 1058 -tttggcgccaannnnnnagatccaaagttaatgctcattggaagggtgatgacagatgg 1000

                                                                        
Query: 464  aaggctgaatgctcgtgtgaaatgtgatctgacagagaatctcgcgctgaaaataaatgc 523
            |||||| ||||||||||||||||||||| ||||||| |||||  || ||||| |||||||
Sbjct: 999  aaggcttaatgctcgtgtgaaatgtgatttgacagacaatctgacgttgaaagtaaatgc 940

                                                                        
Query: 524  gcagcttactagcgagcctcattactctcaagggatgttcaactttgactacaagggcac 583
             ||||||||    ||| | |||||||| ||||||||||| ||||| ||||||||||| | 
Sbjct: 939  acagcttacccaagaggcacattactcacaagggatgtttaacttcgactacaagggaag 880

                                                                     
Query: 584  agactaccgagcacagtttcaaattggaaataatgcgttctatggggcaaattatat 640
             ||||| |||||||| || |||||||| || ||||| |||||||| |||||||||||
Sbjct: 879  tgactatcgagcacaattccaaattgggaacaatgcattctatggtgcaaattatat 823
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  103 bits (52), Expect = 7e-19
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                            
Query: 577      agggcacagactaccgagcacagtttcaaattggaaataatgcgttctatggggcaaatt 636
                |||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 11717920 aggggacagactaccgagctcaatttcaaattggaaataatgcgttctatggggcaaatt 11717979

                    
Query: 637      atat 640
                ||||
Sbjct: 11717980 atat 11717983



 Score =  103 bits (52), Expect = 7e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                            
Query: 182      ggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgcga 241
                |||||||||||||||||||||||| || ||||||||||| | ||||||||||||||||||
Sbjct: 11715910 ggagaaggtggactacctcaacctcccctgccccgtgcccttcgaggagatccagcgcga 11715969

                        
Query: 242      ggccctca 249
                ||||||||
Sbjct: 11715970 ggccctca 11715977



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 83/94 (88%)
 Strand = Plus / Plus

                                                                            
Query: 430      agttaatgcttatcggaaggttgatgactgatggaaggctgaatgctcgtgtgaaatgtg 489
                ||||||| ||| | |||||| ||||||| |||||||| ||||||||||||||||||||||
Sbjct: 11717546 agttaattcttgtaggaagggtgatgacagatggaagactgaatgctcgtgtgaaatgtg 11717605

                                                  
Query: 490      atctgacagagaatctcgcgctgaaaataaatgc 523
                ||||||||||  ||||  | ||||||||||||||
Sbjct: 11717606 atctgacagatgatcttactctgaaaataaatgc 11717639



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                            
Query: 337      ttatgggctccctggaagttccatctcagtcagctgatgttataaaagtcccaacatcac 396
                ||||||| ||| | |||||||||||||||||| ||||   ||||||||| ||||||||||
Sbjct: 11717369 ttatgggttccttagaagttccatctcagtcaactgaaactataaaagttccaacatcac 11717428

                                                   
Query: 397      agtatgaatttggtgccaactttttagatccaaag 431
                | || ||||| |||||||| ||| |||||||||||
Sbjct: 11717429 attacgaattcggtgccaattttatagatccaaag 11717463



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 250      tgtctttgaagcctgaactttttgaaggtttgaggtttga 289
                |||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 11717211 tgtcgttgaaacctgaactttttgaaggattgaggtttga 11717250



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 537      gagcctcattactctcaagggatgttcaactttgactacaagg 579
                ||||| |||||||| ||||| ||||| ||||||||||||||||
Sbjct: 11717738 gagccgcattactcccaaggaatgtttaactttgactacaagg 11717780
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>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0093J20, from chromosome 3, complete sequence
          Length = 148635

 Score =  103 bits (52), Expect = 7e-19
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                          
Query: 577    agggcacagactaccgagcacagtttcaaattggaaataatgcgttctatggggcaaatt 636
              |||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 107015 aggggacagactaccgagctcaatttcaaattggaaataatgcgttctatggggcaaatt 107074

                  
Query: 637    atat 640
              ||||
Sbjct: 107075 atat 107078



 Score =  103 bits (52), Expect = 7e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                          
Query: 182    ggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgcga 241
              |||||||||||||||||||||||| || ||||||||||| | ||||||||||||||||||
Sbjct: 105005 ggagaaggtggactacctcaacctcccctgccccgtgcccttcgaggagatccagcgcga 105064

                      
Query: 242    ggccctca 249
              ||||||||
Sbjct: 105065 ggccctca 105072



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 83/94 (88%)
 Strand = Plus / Plus

                                                                          
Query: 430    agttaatgcttatcggaaggttgatgactgatggaaggctgaatgctcgtgtgaaatgtg 489
              ||||||| ||| | |||||| ||||||| |||||||| ||||||||||||||||||||||
Sbjct: 106641 agttaattcttgtaggaagggtgatgacagatggaagactgaatgctcgtgtgaaatgtg 106700

                                                
Query: 490    atctgacagagaatctcgcgctgaaaataaatgc 523
              ||||||||||  ||||  | ||||||||||||||
Sbjct: 106701 atctgacagatgatcttactctgaaaataaatgc 106734



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                          
Query: 337    ttatgggctccctggaagttccatctcagtcagctgatgttataaaagtcccaacatcac 396
              ||||||| ||| | |||||||||||||||||| ||||   ||||||||| ||||||||||
Sbjct: 106464 ttatgggttccttagaagttccatctcagtcaactgaaactataaaagttccaacatcac 106523

                                                 
Query: 397    agtatgaatttggtgccaactttttagatccaaag 431
              | || ||||| |||||||| ||| |||||||||||
Sbjct: 106524 attacgaattcggtgccaattttatagatccaaag 106558



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                      
Query: 250    tgtctttgaagcctgaactttttgaaggtttgaggtttga 289
              |||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 106306 tgtcgttgaaacctgaactttttgaaggattgaggtttga 106345



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 537    gagcctcattactctcaagggatgttcaactttgactacaagg 579
              ||||| |||||||| ||||| ||||| ||||||||||||||||
Sbjct: 106833 gagccgcattactcccaaggaatgtttaactttgactacaagg 106875
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  103 bits (52), Expect = 7e-19
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                            
Query: 577      agggcacagactaccgagcacagtttcaaattggaaataatgcgttctatggggcaaatt 636
                |||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 11714683 aggggacagactaccgagctcaatttcaaattggaaataatgcgttctatggggcaaatt 11714742

                    
Query: 637      atat 640
                ||||
Sbjct: 11714743 atat 11714746



 Score =  103 bits (52), Expect = 7e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                            
Query: 182      ggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgcga 241
                |||||||||||||||||||||||| || ||||||||||| | ||||||||||||||||||
Sbjct: 11712673 ggagaaggtggactacctcaacctcccctgccccgtgcccttcgaggagatccagcgcga 11712732

                        
Query: 242      ggccctca 249
                ||||||||
Sbjct: 11712733 ggccctca 11712740



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 83/94 (88%)
 Strand = Plus / Plus

                                                                            
Query: 430      agttaatgcttatcggaaggttgatgactgatggaaggctgaatgctcgtgtgaaatgtg 489
                ||||||| ||| | |||||| ||||||| |||||||| ||||||||||||||||||||||
Sbjct: 11714309 agttaattcttgtaggaagggtgatgacagatggaagactgaatgctcgtgtgaaatgtg 11714368

                                                  
Query: 490      atctgacagagaatctcgcgctgaaaataaatgc 523
                ||||||||||  ||||  | ||||||||||||||
Sbjct: 11714369 atctgacagatgatcttactctgaaaataaatgc 11714402



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                            
Query: 337      ttatgggctccctggaagttccatctcagtcagctgatgttataaaagtcccaacatcac 396
                ||||||| ||| | |||||||||||||||||| ||||   ||||||||| ||||||||||
Sbjct: 11714132 ttatgggttccttagaagttccatctcagtcaactgaaactataaaagttccaacatcac 11714191

                                                   
Query: 397      agtatgaatttggtgccaactttttagatccaaag 431
                | || ||||| |||||||| ||| |||||||||||
Sbjct: 11714192 attacgaattcggtgccaattttatagatccaaag 11714226



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 250      tgtctttgaagcctgaactttttgaaggtttgaggtttga 289
                |||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 11713974 tgtcgttgaaacctgaactttttgaaggattgaggtttga 11714013



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 537      gagcctcattactctcaagggatgttcaactttgactacaagg 579
                ||||| |||||||| ||||| ||||| ||||||||||||||||
Sbjct: 11714501 gagccgcattactcccaaggaatgtttaactttgactacaagg 11714543
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>ref|NM_188090.1| Oryza sativa (japonica cultivar-group), Ozsa8522 predicted mRNA
          Length = 873

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                       
Query: 180 gaggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgc 239
           |||||||||||||||||| | ||||| || |||||||| || ||||||||||||||||||
Sbjct: 127 gaggagaaggtggactacatgaacctcccctgccccgtcccctacgaggagatccagcgc 186

                                  
Query: 240 gaggccctcatgtctttgaagcc 262
           |||||| |||||||  |||||||
Sbjct: 187 gaggccttcatgtcgctgaagcc 209
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                           
Query: 180     gaggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgc 239
               |||||||||||||||||| | ||||| || |||||||| || ||||||||||||||||||
Sbjct: 9674597 gaggagaaggtggactacatgaacctcccctgccccgtcccctacgaggagatccagcgc 9674538

                     
Query: 240     gaggcc 245
               ||||||
Sbjct: 9674537 gaggcc 9674532



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 168      gatgataagaaggaggagaaggtg 191
                |||||||||||| |||||||||||
Sbjct: 41106712 gatgataagaagaaggagaaggtg 41106689
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>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0038F12
          Length = 190014

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                          
Query: 180    gaggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgc 239
              |||||||||||||||||| | ||||| || |||||||| || ||||||||||||||||||
Sbjct: 112600 gaggagaaggtggactacatgaacctcccctgccccgtcccctacgaggagatccagcgc 112541

                    
Query: 240    gaggcc 245
              ||||||
Sbjct: 112540 gaggcc 112535
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>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence
          Length = 107448

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                          
Query: 250    tgtctttgaagcctgaactttttgaagg 277
              ||||||||||||||||||||||||||||
Sbjct: 106470 tgtctttgaagcctgaactttttgaagg 106497
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>gb|AC144931.29| Medicago truncatula clone mth2-22b18, complete sequence
          Length = 122819

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                         
Query: 250   tgtctttgaagcctgaactttttgaagg 277
             ||||||||||||||||||||||||||||
Sbjct: 78538 tgtctttgaagcctgaactttttgaagg 78565



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 250   tgtctttgaagcctgaactttttgaaggtttgaggtttgattt 292
             |||||||||||||||| |||||||| |||||| | ||||||||
Sbjct: 99668 tgtctttgaagcctgagctttttgagggtttgcgttttgattt 99710
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>gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete sequence
          Length = 99712

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                         
Query: 250   tgtctttgaagcctgaactttttgaagg 277
             ||||||||||||||||||||||||||||
Sbjct: 96522 tgtctttgaagcctgaactttttgaagg 96549
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>gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete sequence
          Length = 151594

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 250   tgtctttgaagcctgaactttttgaagg 277
             ||||||||||||||||||||||||||||
Sbjct: 73057 tgtctttgaagcctgaactttttgaagg 73030



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 250   tgtctttgaagcctgaactttttgaaggtttgaggtttgattt 292
             |||||||||||||||| |||||||| |||||| | ||||||||
Sbjct: 51928 tgtctttgaagcctgagctttttgagggtttgcgttttgattt 51886
to top
>gb|AC158988.3| Mus musculus BAC clone RP23-393E16 from chromosome 14, complete
             sequence
          Length = 209710

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 161   ggatggggatgataagaaggaggagaag 188
             |||||||||||| |||||||||||||||
Sbjct: 97449 ggatggggatgagaagaaggaggagaag 97422
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>gb|DQ459384.1| Nicotiana tabacum mitochondrial import receptor-like protein mRNA,
           partial cds; nuclear gene for mitochondrial product
          Length = 564

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 237 cgcgaggccctcatgtctttgaagcctgaactttttgaaggtttgaggtttgattttac 295
           ||||| || ||||||||||| ||||| || ||||||||||| ||| | ||||| |||||
Sbjct: 139 cgcgaagctctcatgtctttaaagcccgagctttttgaaggattgcgttttgactttac 197



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 405 tttggtgccaactttttagatccaaagttaatgcttat 442
           |||||||| |||||| ||||||||||| | ||||||||
Sbjct: 307 tttggtgctaactttatagatccaaagatgatgcttat 344
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>gb|AC130657.9| Mus musculus chromosome 1, clone RP23-307H3, complete sequence
          Length = 198570

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 353    agttccatctcagtcagctgat 374
              ||||||||||||||||||||||
Sbjct: 101983 agttccatctcagtcagctgat 102004
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>ref|NM_112890.3| Arabidopsis thaliana TOM40; voltage-gated ion-selective channel
           AT3G20000 (TOM40) mRNA, complete cds
          Length = 1343

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 558 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 611
           |||||||||||||| |||| |||  |||||||| |||| ||| ||||| |||||
Sbjct: 534 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 587



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 399 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 458
           ||||| ||||||||||| | ||  || ||||||||  |||| ||||||||| | ||||||
Sbjct: 375 tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 434

                
Query: 459 gatgg 463
           |||||
Sbjct: 435 gatgg 439
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>gb|AC166973.5| Mus musculus chromosome 1, clone RP24-372J6, complete sequence
          Length = 146400

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 353   agttccatctcagtcagctgat 374
             ||||||||||||||||||||||
Sbjct: 11303 agttccatctcagtcagctgat 11324
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 220    cgtacgaggagatccagcgcgaggccctcatgtc 253
              |||| |||| |||||||||||||||| |||||||
Sbjct: 572404 cgtaggaggcgatccagcgcgaggccttcatgtc 572437
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>gb|AY117216.1| Arabidopsis thaliana putative membrane import protein (At3g20000)
           mRNA, complete cds
          Length = 961

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 558 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 611
           |||||||||||||| |||| |||  |||||||| |||| ||| ||||| |||||
Sbjct: 439 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 492



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 399 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 458
           ||||| ||||||||||| | ||  || ||||||||  |||| ||||||||| | ||||||
Sbjct: 280 tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 339

                
Query: 459 gatgg 463
           |||||
Sbjct: 340 gatgg 344
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>gb|AY050925.1| Arabidopsis thaliana putative membrane import protein (At3g20000)
           mRNA, complete cds
          Length = 1329

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 558 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 611
           |||||||||||||| |||| |||  |||||||| |||| ||| ||||| |||||
Sbjct: 504 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 557



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 399 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 458
           ||||| ||||||||||| | ||  || ||||||||  |||| ||||||||| | ||||||
Sbjct: 345 tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 404

                
Query: 459 gatgg 463
           |||||
Sbjct: 405 gatgg 409
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>emb|BX824823.1|CNS0A5JY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH75ZE08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1290

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 558 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 611
           |||||||||||||| |||| |||  |||||||| |||| ||| ||||| |||||
Sbjct: 528 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 581



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 399 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 458
           ||||| ||||||||||| | ||  || ||||||||  |||| ||||||||| | ||||||
Sbjct: 369 tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 428

                
Query: 459 gatgg 463
           |||||
Sbjct: 429 gatgg 433
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>emb|BX824118.1|CNS0A5LF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH23ZF07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1026

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 558 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 611
           |||||||||||||| |||| |||  |||||||| |||| ||| ||||| |||||
Sbjct: 232 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 285



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 399 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 458
           ||||| ||||||||||| | ||  || ||||||||  |||| ||||||||| | ||||||
Sbjct: 73  tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 132

                
Query: 459 gatgg 463
           |||||
Sbjct: 133 gatgg 137
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>emb|BX822251.1|CNS0A5UN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB23ZB11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1301

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 558 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 611
           |||||||||||||| |||| |||  |||||||| |||| ||| ||||| |||||
Sbjct: 534 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 587



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 399 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 458
           ||||| ||||||||||| | ||  || ||||||||  |||| ||||||||| | ||||||
Sbjct: 375 tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 434

                
Query: 459 gatgg 463
           |||||
Sbjct: 435 gatgg 439
to top
>emb|BX824709.1|CNS0A5IA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH66ZG09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1287

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 558 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 611
           |||||||||||||| |||| |||  |||||||| |||| ||| ||||| |||||
Sbjct: 532 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 585



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 399 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 458
           ||||| ||||||||||| | ||  || ||||||||  |||| ||||||||| | ||||||
Sbjct: 373 tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 432

                
Query: 459 gatgg 463
           |||||
Sbjct: 433 gatgg 437
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>gb|AC084575.1|CBRG39N14 Caenorhabditis briggsae cosmid G39N14, complete sequence
          Length = 45027

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 167   ggatgataagaaggaggagaag 188
             ||||||||||||||||||||||
Sbjct: 17352 ggatgataagaaggaggagaag 17373
to top
>gb|AC116810.14| Mus musculus chromosome 1, clone RP24-355J5, complete sequence
          Length = 147130

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 257   gaagcctgaactttttgaagg 277
             |||||||||||||||||||||
Sbjct: 31486 gaagcctgaactttttgaagg 31466
to top
>gb|AC115484.2| Drosophila melanogaster clone BACR06K01, complete sequence
          Length = 168504

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     ccaccccataacccctaacct 24
             |||||||||||||||||||||
Sbjct: 96944 ccaccccataacccctaacct 96964
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>ref|NM_001040324.1| Danio rerio zgc:136790 (zgc:136790), mRNA
          Length = 2269

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 162  gatggggatgataagaaggag 182
            |||||||||||||||||||||
Sbjct: 1337 gatggggatgataagaaggag 1357
to top
>gb|BC053331.1| Mus musculus crumbs homolog 1 (Drosophila), mRNA (cDNA clone
            IMAGE:5369475), partial cds
          Length = 4562

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 257  gaagcctgaactttttgaagg 277
            |||||||||||||||||||||
Sbjct: 1612 gaagcctgaactttttgaagg 1632
to top
>ref|XM_801308.1| Trypanosoma cruzi strain CL Brener trans-sialidase
            (Tc00.1047053511839.40) partial mRNA
          Length = 2592

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 161  ggatggggatgataagaaggaggag 185
            |||||| ||||||||||||||||||
Sbjct: 1488 ggatggtgatgataagaaggaggag 1512
to top
>ref|XM_811296.1| Trypanosoma cruzi strain CL Brener trans-sialidase
            (Tc00.1047053511843.70) partial mRNA
          Length = 2763

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 161  ggatggggatgataagaaggaggag 185
            |||||| ||||||||||||||||||
Sbjct: 1275 ggatggtgatgataagaaggaggag 1299
to top
>emb|BX890603.17| Zebrafish DNA sequence from clone DKEYP-19G9 in linkage group 23,
             complete sequence
          Length = 184711

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 174   aagaaggaggagaaggtggac 194
             |||||||||||||||||||||
Sbjct: 73733 aagaaggaggagaaggtggac 73753
to top
>ref|XM_950357.1| Theileria annulata strain Ankara hypothetical protein (TA18120)
            partial mRNA
          Length = 7218

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 284  gtttgattttacaaagatgtt 304
            |||||||||||||||||||||
Sbjct: 987  gtttgattttacaaagatgtt 1007
to top
>gb|AF492496.1| Mus musculus crumbs-like protein 2 (Crb1) mRNA, complete cds
          Length = 6166

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 257  gaagcctgaactttttgaagg 277
            |||||||||||||||||||||
Sbjct: 3210 gaagcctgaactttttgaagg 3230
to top
>gb|BC115269.1| Danio rerio cDNA clone MGC:136790 IMAGE:7053369, complete cds
          Length = 2269

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 162  gatggggatgataagaaggag 182
            |||||||||||||||||||||
Sbjct: 1337 gatggggatgataagaaggag 1357
to top
>gb|AF406641.1|AF406641 Mus musculus crumbs-like protein 1 precursor (Crb1) mRNA, complete
            cds
          Length = 4578

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 257  gaagcctgaactttttgaagg 277
            |||||||||||||||||||||
Sbjct: 3334 gaagcctgaactttttgaagg 3354
to top
>dbj|AK164413.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230013N05 product:crumbs
           homolog 1 (Drosophila), full insert sequence
          Length = 3232

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 gaagcctgaactttttgaagg 277
           |||||||||||||||||||||
Sbjct: 333 gaagcctgaactttttgaagg 353
to top
>gb|AC092399.2| Drosophila melanogaster, chromosome 2L, region 36B-36C, BAC clone
             BACR31N11, complete sequence
          Length = 122013

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     ccaccccataacccctaacct 24
             |||||||||||||||||||||
Sbjct: 72181 ccaccccataacccctaacct 72201
to top
>gb|BC031378.1| Mus musculus crumbs homolog 1 (Drosophila), mRNA (cDNA clone
           IMAGE:5358269), partial cds
          Length = 3368

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 gaagcctgaactttttgaagg 277
           |||||||||||||||||||||
Sbjct: 429 gaagcctgaactttttgaagg 449
to top
>gb|AE003649.2| Drosophila melanogaster chromosome 2L, section 58 of 83 of the complete
             sequence
          Length = 275699

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     ccaccccataacccctaacct 24
             |||||||||||||||||||||
Sbjct: 37638 ccaccccataacccctaacct 37658
to top
>emb|AL824711.14| Mouse DNA sequence from clone RP23-112I20 on chromosome X, complete
             sequence
          Length = 118199

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 334   tccttatgggctccctggaag 354
             |||||||||||||||||||||
Sbjct: 26081 tccttatgggctccctggaag 26061
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>ref|NM_133239.1| Mus musculus crumbs homolog 1 (Drosophila) (Crb1), mRNA
          Length = 4578

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 257  gaagcctgaactttttgaagg 277
            |||||||||||||||||||||
Sbjct: 3334 gaagcctgaactttttgaagg 3354
to top
>emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on chromosome X, complete
             sequence
          Length = 204206

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 247   tcatgtctttgaagcctgaactttt 271
             ||||||||| |||||||||||||||
Sbjct: 27564 tcatgtcttggaagcctgaactttt 27588
to top
>ref|NM_190065.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1530

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 168 gatgataagaaggaggagaaggtg 191
           |||||||||||| |||||||||||
Sbjct: 439 gatgataagaagaaggagaaggtg 462
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>gb|AC169698.1| Rhesus Macaque  BAC CH250-254N3 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 179377

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 441   atcggaaggttgatgactga 460
             ||||||||||||||||||||
Sbjct: 58759 atcggaaggttgatgactga 58740
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 132     gggctcgccggcatcctccc 151
               ||||||||||||||||||||
Sbjct: 2545650 gggctcgccggcatcctccc 2545669
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>gb|AC129205.3| Mus musculus BAC clone RP24-235I5 from chromosome 19, complete sequence
          Length = 165024

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   agtcagctgatgttataaaa 383
             ||||||||||||||||||||
Sbjct: 90177 agtcagctgatgttataaaa 90158
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>ref|XM_454492.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E12067g predicted mRNA
          Length = 1650

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 atgataagaaggaggagaag 188
           ||||||||||||||||||||
Sbjct: 1   atgataagaaggaggagaag 20
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>gb|AC125055.3| Mus musculus BAC clone RP23-397L11 from chromosome 7, complete sequence
          Length = 209066

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 587    ctaccgagcacagtttcaaa 606
              ||||||||||||||||||||
Sbjct: 120399 ctaccgagcacagtttcaaa 120418
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>gb|AC125466.4| Mus musculus BAC clone RP23-477O24 from chromosome 9, complete sequence
          Length = 150128

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   aagaaggaggagaaggtgga 193
             ||||||||||||||||||||
Sbjct: 19089 aagaaggaggagaaggtgga 19108
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>gb|AC126928.3| Mus musculus BAC clone RP24-337I23 from chromosome 9, complete sequence
          Length = 187235

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   aagaaggaggagaaggtgga 193
             ||||||||||||||||||||
Sbjct: 45893 aagaaggaggagaaggtgga 45874
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>gb|AC005536.2| Homo sapiens BAC clone GS1-115E6 from 7, complete sequence
          Length = 165527

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   aagaaggaggagaaggtgga 193
             ||||||||||||||||||||
Sbjct: 49664 aagaaggaggagaaggtgga 49683
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>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2234072

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 169     atgataagaaggaggagaag 188
               ||||||||||||||||||||
Sbjct: 1066129 atgataagaaggaggagaag 1066148
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>dbj|AK156441.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830021P09 product:unclassifiable, full
           insert sequence
          Length = 1548

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 364 agtcagctgatgttataaaa 383
           ||||||||||||||||||||
Sbjct: 393 agtcagctgatgttataaaa 374
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>gb|AC025280.5| Homo sapiens chromosome 16 clone RP11-254F19, complete sequence
          Length = 174714

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 277   gtttgaggtttgattttacaaaga 300
             |||||||||||| |||||||||||
Sbjct: 73824 gtttgaggtttggttttacaaaga 73847
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>gb|AC092341.5| Homo sapiens chromosome 16 clone RP11-260K13, complete sequence
          Length = 180623

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 277    gtttgaggtttgattttacaaaga 300
              |||||||||||| |||||||||||
Sbjct: 165537 gtttgaggtttggttttacaaaga 165560
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>gb|AC154767.2| Mus musculus BAC clone RP23-105P19 from chromosome 13, complete
             sequence
          Length = 189362

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 256   tgaagcctgaactttttgaaggtt 279
             |||||||| |||||||||||||||
Sbjct: 87640 tgaagcctaaactttttgaaggtt 87617
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>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0504E02
          Length = 137468

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 168  gatgataagaaggaggagaaggtg 191
            |||||||||||| |||||||||||
Sbjct: 3767 gatgataagaagaaggagaaggtg 3744
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>dbj|AK111027.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-H05, full
           insert sequence
          Length = 668

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 168 gatgataagaaggaggagaaggtg 191
           |||||||||||| |||||||||||
Sbjct: 504 gatgataagaagaaggagaaggtg 527
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>gb|AC003681.1|AC003681 Human PAC clone RP3-394A18 from 22q12.1-qter, complete sequence
          Length = 88528

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 563   caactttgactacaagggcacaga 586
             |||||| |||||||||||||||||
Sbjct: 39400 caacttggactacaagggcacaga 39377
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>dbj|AK107422.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-F08, full
           insert sequence
          Length = 1552

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 aagaaggaggagaaggtgga 193
           ||||||||||||||||||||
Sbjct: 256 aagaaggaggagaaggtgga 275
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>dbj|AK107072.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-E12, full
           insert sequence
          Length = 1804

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 168 gatgataagaaggaggagaaggtg 191
           |||||||||||| |||||||||||
Sbjct: 506 gatgataagaagaaggagaaggtg 529
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>dbj|AP000870.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-697H10, complete
              sequence
          Length = 179339

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    gatggggatgataagaagga 181
              ||||||||||||||||||||
Sbjct: 134875 gatggggatgataagaagga 134894
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>gb|AC005187.1|AC005187 Homo sapiens chromosome 4 clone B153K6 map 4q25, complete sequence
          Length = 114621

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   aagaaggaggagaaggtgga 193
             ||||||||||||||||||||
Sbjct: 13086 aagaaggaggagaaggtgga 13105
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>emb|Z81029.1|CEC01A2 Caenorhabditis elegans Cosmid C01A2, complete sequence
          Length = 40202

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 254  tttgaagcctgaactttttgaagg 277
            |||||||| |||||||||||||||
Sbjct: 7029 tttgaagcatgaactttttgaagg 7006
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>gb|AC163437.16| Mus musculus chromosome 5, clone RP23-119I18, complete sequence
          Length = 190996

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 596    acagtttcaaattggaaata 615
              ||||||||||||||||||||
Sbjct: 121831 acagtttcaaattggaaata 121812
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>emb|AL627078.10| Mouse DNA sequence from clone RP23-138K13 on chromosome 4, complete
             sequence
          Length = 90129

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 162   gatggggatgataagaaggaggagaagg 189
             ||||||||||||| |||||| |||||||
Sbjct: 59573 gatggggatgatacgaaggatgagaagg 59600


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,995,020
Number of Sequences: 3902068
Number of extensions: 4995020
Number of successful extensions: 103169
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102846
Number of HSP's gapped (non-prelim): 321
length of query: 643
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 620
effective length of database: 17,143,297,704
effective search space: 10628844576480
effective search space used: 10628844576480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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