| Clone Name | bags23f22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ544688.1|OSA544688 Oryza sativa (japonica cultivar-group) mRNA for phosphatidylinositol 4-phosphate 5-kinase (pipk1 gene) Length = 2438 Score = 559 bits (282), Expect = e-156 Identities = 483/550 (87%) Strand = Plus / Plus Query: 80 acagtgatgttcataaggatttggtctatgaacgggaatatatacaaggagtgcttattt 139 ||||||| ||| |||| |||| ||| |||||||||||||| |||||||||||||||| Sbjct: 932 acagtgaagttgataaagattcggtttatgaacgggaatacgtacaaggagtgcttatca 991 Query: 140 ccgagcatccaaaaggcaaacattcaggaatgttggacagtggtgaaacacaggaaaata 199 || || |||||| | || ||||| |||||| ||| || ||| | |||| ||||||| Sbjct: 992 tggaacaaccaaaaaacgaagattcaagaatgtcggagagcggtatagcacaagaaaata 1051 Query: 200 cctggcaaaaacaagaaagagggccaatggagactatttacaagggacacaggagctatt 259 |||| | ||||||| | ||| ||||||||||||||||||||||| || |||||||||| Sbjct: 1052 actgggagaaacaagctaaaggaccaatggagactatttacaagggccataggagctatt 1111 Query: 260 ttctaatgcttaatttgcaactcggcatcaggtataccgtgggtaaaatcacccctgtac 319 |||||||||||| |||||||| |||||||||||||| || |||||||| |||||||| | Sbjct: 1112 atctaatgcttaacttgcaacttggcatcaggtatactgtaggtaaaattacccctgtgc 1171 Query: 320 ctttgcgtgaagttcgttcaaatgattttggacctagggcccggataataatgtacttcc 379 ||||||||||||||||||||||||||||||||||| | || || |||| ||||||||||| Sbjct: 1172 ctttgcgtgaagttcgttcaaatgattttggacctcgagcacgaataaaaatgtacttcc 1231 Query: 380 cttgtgaaggctcgcagtatacccctccacactgctctgtcaatttcttttggaaagact 439 ||||||| || || |||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 1232 cttgtgagggatcccagtatacccctccgcactactctgtcgatttcttttggaaagact 1291 Query: 440 actgtcctatggtcttccggaatctccgggaaatgtttcatatcgatgccgcagattaca 499 | ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 1292 attgtccgatggtcttccggaatcttcgagaaatgtttcatatcgatgctgcagattaca 1351 Query: 500 tgatgtccatatgtgggggtgatagtctaaaggagctttcttcacctgggaaaagtggca 559 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1352 tgatgtctatatgtggtggtgatagtctaaaggagctttcttcacctgggaaaagtggca 1411 Query: 560 gtattttctatctttcgcaggacgaacgatttgttataaaaacattgagaaagagtgagc 619 | |||||||||||||| || || ||||| |||||||||||||||||||| || | ||||| Sbjct: 1412 gcattttctatctttctcaagatgaacgttttgttataaaaacattgaggaaaactgagc 1471 Query: 620 tgaagatact 629 |||||||||| Sbjct: 1472 tgaagatact 1481
>emb|AJ439082.1|OSA439082 Oryza sativa partial mRNA for phosphatidylinositol-4-phosphate 5-kinase (PIPK1 gene) Length = 2132 Score = 553 bits (279), Expect = e-154 Identities = 480/547 (87%) Strand = Plus / Plus Query: 80 acagtgatgttcataaggatttggtctatgaacgggaatatatacaaggagtgcttattt 139 ||||||| ||| |||| |||| ||| |||||||||||||| |||||||||||||||| Sbjct: 599 acagtgaagttgataaagattcggtttatgaacgggaatacgtacaaggagtgcttatca 658 Query: 140 ccgagcatccaaaaggcaaacattcaggaatgttggacagtggtgaaacacaggaaaata 199 || || |||||| | || ||||| |||||| ||| || ||| | |||| ||||||| Sbjct: 659 tggaacaaccaaaaaacgaagattcaagaatgtcggagagcggtatagcacaagaaaata 718 Query: 200 cctggcaaaaacaagaaagagggccaatggagactatttacaagggacacaggagctatt 259 |||| | ||||||| | ||| ||||||||||||||||||||||| || |||||||||| Sbjct: 719 actgggagaaacaagctaaaggaccaatggagactatttacaagggccataggagctatt 778 Query: 260 ttctaatgcttaatttgcaactcggcatcaggtataccgtgggtaaaatcacccctgtac 319 |||||||||||| |||||||| |||||||||||||| || |||||||| |||||||| | Sbjct: 779 atctaatgcttaacttgcaacttggcatcaggtatactgtaggtaaaattacccctgtgc 838 Query: 320 ctttgcgtgaagttcgttcaaatgattttggacctagggcccggataataatgtacttcc 379 ||||||||||||||||||||||||||||||||||| | || || |||| ||||||||||| Sbjct: 839 ctttgcgtgaagttcgttcaaatgattttggacctcgagcacgaataaaaatgtacttcc 898 Query: 380 cttgtgaaggctcgcagtatacccctccacactgctctgtcaatttcttttggaaagact 439 ||||||| || || |||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 899 cttgtgagggatcccagtatacccctccgcactactctgtcgatttcttttggaaagact 958 Query: 440 actgtcctatggtcttccggaatctccgggaaatgtttcatatcgatgccgcagattaca 499 | ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 959 attgtccgatggtcttccggaatcttcgagaaatgtttcatatcgatgctgcagattaca 1018 Query: 500 tgatgtccatatgtgggggtgatagtctaaaggagctttcttcacctgggaaaagtggca 559 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1019 tgatgtctatatgtggtggtgatagtctaaaggagctttcttcacctgggaaaagtggca 1078 Query: 560 gtattttctatctttcgcaggacgaacgatttgttataaaaacattgagaaagagtgagc 619 | |||||||||||||| || || ||||| |||||||||||||||||||| || | ||||| Sbjct: 1079 gcattttctatctttctcaagatgaacgttttgttataaaaacattgaggaaaactgagc 1138 Query: 620 tgaagat 626 ||||||| Sbjct: 1139 tgaagat 1145
>dbj|AK065869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045E16, full insert sequence Length = 1978 Score = 537 bits (271), Expect = e-149 Identities = 478/547 (87%) Strand = Plus / Plus Query: 80 acagtgatgttcataaggatttggtctatgaacgggaatatatacaaggagtgcttattt 139 ||||||| ||| |||| |||| ||| |||||||||||||| |||||||||||||||| Sbjct: 308 acagtgaagttgataaagattcggtttatgaacgggaatacgtacaaggagtgcttatca 367 Query: 140 ccgagcatccaaaaggcaaacattcaggaatgttggacagtggtgaaacacaggaaaata 199 || || |||||| | || ||||| |||||| ||| || ||| | |||| ||||||| Sbjct: 368 tggaacaaccaaaaaacgaagattcaagaatgtcggagagcggtatagcacaagaaaata 427 Query: 200 cctggcaaaaacaagaaagagggccaatggagactatttacaagggacacaggagctatt 259 |||| | ||||||| | ||| ||||||||||||||||||||||| || |||||||||| Sbjct: 428 actgggagaaacaagctaaaggaccaatggagactatttacaagggccataggagctatt 487 Query: 260 ttctaatgcttaatttgcaactcggcatcaggtataccgtgggtaaaatcacccctgtac 319 ||||||||||| |||||||| |||||||||||||| || |||||||| |||||||| | Sbjct: 488 acctaatgcttaacttgcaacttggcatcaggtatactgtaggtaaaattacccctgtgc 547 Query: 320 ctttgcgtgaagttcgttcaaatgattttggacctagggcccggataataatgtacttcc 379 ||||||||||||||||||||||||||||||||||| | || || ||| ||||||||||| Sbjct: 548 ctttgcgtgaagttcgttcaaatgattttggacctcgagcacgactaaaaatgtacttcc 607 Query: 380 cttgtgaaggctcgcagtatacccctccacactgctctgtcaatttcttttggaaagact 439 ||||||| || || |||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 608 cttgtgagggatcccagtatacccctccgcactactctgtcgatttcttttggaaagact 667 Query: 440 actgtcctatggtcttccggaatctccgggaaatgtttcatatcgatgccgcagattaca 499 | ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 668 attgtccgatggtcttccggaatcttcgagaaatgtttcatatcgatgctgcagattaca 727 Query: 500 tgatgtccatatgtgggggtgatagtctaaaggagctttcttcacctgggaaaagtggca 559 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 tgatgtctatatgtggtggtgatagtctaaaggagctttcttcacctgggaaaagtggca 787 Query: 560 gtattttctatctttcgcaggacgaacgatttgttataaaaacattgagaaagagtgagc 619 | |||||||||||||| || || ||||| |||||||||||||||||||| || | ||||| Sbjct: 788 gcattttctatctttctcaagatgaacgttttgttataaaaacattgaggaaaactgagc 847 Query: 620 tgaagat 626 ||||||| Sbjct: 848 tgaagat 854
>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 Score = 228 bits (115), Expect = 2e-56 Identities = 154/167 (92%) Strand = Plus / Plus Query: 458 ggaatctccgggaaatgtttcatatcgatgccgcagattacatgatgtccatatgtgggg 517 ||||||| || |||||||||||||||||||| ||||||||||||||||| |||||||| | Sbjct: 23934 ggaatcttcgagaaatgtttcatatcgatgctgcagattacatgatgtctatatgtggtg 23993 Query: 518 gtgatagtctaaaggagctttcttcacctgggaaaagtggcagtattttctatctttcgc 577 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 23994 gtgatagtctaaaggagctttcttcacctgggaaaagtggcagcattttctatctttctc 24053 Query: 578 aggacgaacgatttgttataaaaacattgagaaagagtgagctgaag 624 | || ||||| |||||||||||||||||||| || | |||||||||| Sbjct: 24054 aagatgaacgttttgttataaaaacattgaggaaaactgagctgaag 24100 Score = 206 bits (104), Expect = 6e-50 Identities = 155/172 (90%) Strand = Plus / Plus Query: 288 caggtataccgtgggtaaaatcacccctgtacctttgcgtgaagttcgttcaaatgattt 347 ||||||||| || |||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 23430 caggtatactgtaggtaaaattacccctgtgcctttgcgtgaagttcgttcaaatgattt 23489 Query: 348 tggacctagggcccggataataatgtacttcccttgtgaaggctcgcagtatacccctcc 407 ||||||| | || || |||| |||||||||||||||||| || || |||||||||||||| Sbjct: 23490 tggacctcgagcacgaataaaaatgtacttcccttgtgagggatcccagtatacccctcc 23549 Query: 408 acactgctctgtcaatttcttttggaaagactactgtcctatggtcttccgg 459 |||| ||||||| ||||||||||||||||||| ||||| |||||||||||| Sbjct: 23550 gcactactctgtcgatttcttttggaaagactattgtccgatggtcttccgg 23601 Score = 131 bits (66), Expect = 3e-27 Identities = 177/214 (82%) Strand = Plus / Plus Query: 80 acagtgatgttcataaggatttggtctatgaacgggaatatatacaaggagtgcttattt 139 ||||||| ||| |||| |||| ||| |||||||||||||| |||||||||||||||| Sbjct: 22651 acagtgaagttgataaagattcggtttatgaacgggaatacgtacaaggagtgcttatca 22710 Query: 140 ccgagcatccaaaaggcaaacattcaggaatgttggacagtggtgaaacacaggaaaata 199 || || |||||| | || ||||| |||||| ||| || ||| | |||| ||||||| Sbjct: 22711 tggaacaaccaaaaaacgaagattcaagaatgtcggagagcggtatagcacaagaaaata 22770 Query: 200 cctggcaaaaacaagaaagagggccaatggagactatttacaagggacacaggagctatt 259 |||| | ||||||| | ||| ||||||||||||||||||||||| || |||||||||| Sbjct: 22771 actgggagaaacaagctaaaggaccaatggagactatttacaagggccataggagctatt 22830 Query: 260 ttctaatgcttaatttgcaactcggcatcaggta 293 |||||||||||| |||||||| ||||||||||| Sbjct: 22831 atctaatgcttaacttgcaacttggcatcaggta 22864
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 228 bits (115), Expect = 2e-56 Identities = 154/167 (92%) Strand = Plus / Plus Query: 458 ggaatctccgggaaatgtttcatatcgatgccgcagattacatgatgtccatatgtgggg 517 ||||||| || |||||||||||||||||||| ||||||||||||||||| |||||||| | Sbjct: 27891772 ggaatcttcgagaaatgtttcatatcgatgctgcagattacatgatgtctatatgtggtg 27891831 Query: 518 gtgatagtctaaaggagctttcttcacctgggaaaagtggcagtattttctatctttcgc 577 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 27891832 gtgatagtctaaaggagctttcttcacctgggaaaagtggcagcattttctatctttctc 27891891 Query: 578 aggacgaacgatttgttataaaaacattgagaaagagtgagctgaag 624 | || ||||| |||||||||||||||||||| || | |||||||||| Sbjct: 27891892 aagatgaacgttttgttataaaaacattgaggaaaactgagctgaag 27891938 Score = 206 bits (104), Expect = 6e-50 Identities = 155/172 (90%) Strand = Plus / Plus Query: 288 caggtataccgtgggtaaaatcacccctgtacctttgcgtgaagttcgttcaaatgattt 347 ||||||||| || |||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 27891268 caggtatactgtaggtaaaattacccctgtgcctttgcgtgaagttcgttcaaatgattt 27891327 Query: 348 tggacctagggcccggataataatgtacttcccttgtgaaggctcgcagtatacccctcc 407 ||||||| | || || |||| |||||||||||||||||| || || |||||||||||||| Sbjct: 27891328 tggacctcgagcacgaataaaaatgtacttcccttgtgagggatcccagtatacccctcc 27891387 Query: 408 acactgctctgtcaatttcttttggaaagactactgtcctatggtcttccgg 459 |||| ||||||| ||||||||||||||||||| ||||| |||||||||||| Sbjct: 27891388 gcactactctgtcgatttcttttggaaagactattgtccgatggtcttccgg 27891439 Score = 131 bits (66), Expect = 3e-27 Identities = 177/214 (82%) Strand = Plus / Plus Query: 80 acagtgatgttcataaggatttggtctatgaacgggaatatatacaaggagtgcttattt 139 ||||||| ||| |||| |||| ||| |||||||||||||| |||||||||||||||| Sbjct: 27890489 acagtgaagttgataaagattcggtttatgaacgggaatacgtacaaggagtgcttatca 27890548 Query: 140 ccgagcatccaaaaggcaaacattcaggaatgttggacagtggtgaaacacaggaaaata 199 || || |||||| | || ||||| |||||| ||| || ||| | |||| ||||||| Sbjct: 27890549 tggaacaaccaaaaaacgaagattcaagaatgtcggagagcggtatagcacaagaaaata 27890608 Query: 200 cctggcaaaaacaagaaagagggccaatggagactatttacaagggacacaggagctatt 259 |||| | ||||||| | ||| ||||||||||||||||||||||| || |||||||||| Sbjct: 27890609 actgggagaaacaagctaaaggaccaatggagactatttacaagggccataggagctatt 27890668 Query: 260 ttctaatgcttaatttgcaactcggcatcaggta 293 |||||||||||| |||||||| ||||||||||| Sbjct: 27890669 atctaatgcttaacttgcaacttggcatcaggta 27890702
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 228 bits (115), Expect = 2e-56 Identities = 154/167 (92%) Strand = Plus / Plus Query: 458 ggaatctccgggaaatgtttcatatcgatgccgcagattacatgatgtccatatgtgggg 517 ||||||| || |||||||||||||||||||| ||||||||||||||||| |||||||| | Sbjct: 27983096 ggaatcttcgagaaatgtttcatatcgatgctgcagattacatgatgtctatatgtggtg 27983155 Query: 518 gtgatagtctaaaggagctttcttcacctgggaaaagtggcagtattttctatctttcgc 577 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 27983156 gtgatagtctaaaggagctttcttcacctgggaaaagtggcagcattttctatctttctc 27983215 Query: 578 aggacgaacgatttgttataaaaacattgagaaagagtgagctgaag 624 | || ||||| |||||||||||||||||||| || | |||||||||| Sbjct: 27983216 aagatgaacgttttgttataaaaacattgaggaaaactgagctgaag 27983262 Score = 206 bits (104), Expect = 6e-50 Identities = 155/172 (90%) Strand = Plus / Plus Query: 288 caggtataccgtgggtaaaatcacccctgtacctttgcgtgaagttcgttcaaatgattt 347 ||||||||| || |||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 27982592 caggtatactgtaggtaaaattacccctgtgcctttgcgtgaagttcgttcaaatgattt 27982651 Query: 348 tggacctagggcccggataataatgtacttcccttgtgaaggctcgcagtatacccctcc 407 ||||||| | || || |||| |||||||||||||||||| || || |||||||||||||| Sbjct: 27982652 tggacctcgagcacgaataaaaatgtacttcccttgtgagggatcccagtatacccctcc 27982711 Query: 408 acactgctctgtcaatttcttttggaaagactactgtcctatggtcttccgg 459 |||| ||||||| ||||||||||||||||||| ||||| |||||||||||| Sbjct: 27982712 gcactactctgtcgatttcttttggaaagactattgtccgatggtcttccgg 27982763 Score = 131 bits (66), Expect = 3e-27 Identities = 177/214 (82%) Strand = Plus / Plus Query: 80 acagtgatgttcataaggatttggtctatgaacgggaatatatacaaggagtgcttattt 139 ||||||| ||| |||| |||| ||| |||||||||||||| |||||||||||||||| Sbjct: 27981813 acagtgaagttgataaagattcggtttatgaacgggaatacgtacaaggagtgcttatca 27981872 Query: 140 ccgagcatccaaaaggcaaacattcaggaatgttggacagtggtgaaacacaggaaaata 199 || || |||||| | || ||||| |||||| ||| || ||| | |||| ||||||| Sbjct: 27981873 tggaacaaccaaaaaacgaagattcaagaatgtcggagagcggtatagcacaagaaaata 27981932 Query: 200 cctggcaaaaacaagaaagagggccaatggagactatttacaagggacacaggagctatt 259 |||| | ||||||| | ||| ||||||||||||||||||||||| || |||||||||| Sbjct: 27981933 actgggagaaacaagctaaaggaccaatggagactatttacaagggccataggagctatt 27981992 Query: 260 ttctaatgcttaatttgcaactcggcatcaggta 293 |||||||||||| |||||||| ||||||||||| Sbjct: 27981993 atctaatgcttaacttgcaacttggcatcaggta 27982026
>dbj|AK099707.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075K17, full insert sequence Length = 1624 Score = 208 bits (105), Expect = 2e-50 Identities = 138/149 (92%) Strand = Plus / Plus Query: 478 catatcgatgccgcagattacatgatgtccatatgtgggggtgatagtctaaaggagctt 537 ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1 catatcgatgctgcagattacatgatgtctatatgtggtggtgatagtctaaaggagctt 60 Query: 538 tcttcacctgggaaaagtggcagtattttctatctttcgcaggacgaacgatttgttata 597 ||||||||||||||||||||||| |||||||||||||| || || ||||| ||||||||| Sbjct: 61 tcttcacctgggaaaagtggcagcattttctatctttctcaagatgaacgttttgttata 120 Query: 598 aaaacattgagaaagagtgagctgaagat 626 ||||||||||| || | |||||||||||| Sbjct: 121 aaaacattgaggaaaactgagctgaagat 149
>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 Score = 198 bits (100), Expect = 2e-47 Identities = 154/172 (89%) Strand = Plus / Plus Query: 288 caggtataccgtgggtaaaatcacccctgtacctttgcgtgaagttcgttcaaatgattt 347 ||||||||| || ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 71870 caggtatacagtaggtaaaatcacccctgtgcctttgcgcgaagttcgttcaaatgattt 71929 Query: 348 tggacctagggcccggataataatgtacttcccttgtgaaggctcgcagtatacccctcc 407 ||||||| | || ||||||| ||||||||||||| |||||||||||||||||| ||||| Sbjct: 71930 tggacctcgagcacggataagaatgtacttccctactgaaggctcgcagtatacgcctcc 71989 Query: 408 acactgctctgtcaatttcttttggaaagactactgtcctatggtcttccgg 459 |||| ||||||||||||||||||||| || || || |||||||| |||||| Sbjct: 71990 acaccactctgtcaatttcttttggaaggattattgccctatggttttccgg 72041 Score = 172 bits (87), Expect = 9e-40 Identities = 147/167 (88%) Strand = Plus / Plus Query: 458 ggaatctccgggaaatgtttcatatcgatgccgcagattacatgatgtccatatgtgggg 517 ||||||| || |||||||| || || ||||| |||||||||||||||||||||||||| | Sbjct: 72642 ggaatcttcgagaaatgttccacattgatgctgcagattacatgatgtccatatgtggtg 72701 Query: 518 gtgatagtctaaaggagctttcttcacctgggaaaagtggcagtattttctatctttcgc 577 ||| ||||| || |||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 72702 atgacagtctgaaagagctttcttcacccgggaaaagtggcagtattttctatctttcac 72761 Query: 578 aggacgaacgatttgttataaaaacattgagaaagagtgagctgaag 624 |||| ||||| ||||| |||||||| |||||||| |||||||||| Sbjct: 72762 aggatgaacgttttgtcataaaaaccttgagaaaagctgagctgaag 72808 Score = 115 bits (58), Expect = 2e-22 Identities = 160/194 (82%) Strand = Plus / Plus Query: 100 ttggtctatgaacgggaatatatacaaggagtgcttatttccgagcatccaaaaggcaaa 159 ||||| |||||| | || ||| |||||||||| ||||| || || | |||||| || | Sbjct: 70253 ttggtttatgaaagagagtatgtacaaggagtacttatctcggaaaagccaaaatgccat 70312 Query: 160 cattcaggaatgttggacagtggtgaaacacaggaaaatacctggcaaaaacaagaaaga 219 |||| |||||| |||| |||||| |||||||||| ||||||||||||| |||| || Sbjct: 70313 gattccggaatgctggatagtggtaaaacacaggagcatacctggcaaaagcaagctgga 70372 Query: 220 gggccaatggagactatttacaagggacacaggagctattttctaatgcttaatttgcaa 279 ||||| ||||||||||||| ||| || ||||||||||||| ||||||||| |||||||| Sbjct: 70373 gggcccatggagactattttcaaaggccacaggagctattacctaatgcttgatttgcaa 70432 Query: 280 ctcggcatcaggta 293 || ||||| ||||| Sbjct: 70433 cttggcattaggta 70446
>ref|NM_104770.3| Arabidopsis thaliana 1-phosphatidylinositol-4-phosphate 5-kinase AT1G60890 mRNA, complete cds Length = 3031 Score = 89.7 bits (45), Expect = 1e-14 Identities = 144/177 (81%) Strand = Plus / Plus Query: 429 ttggaaagactactgtcctatggtcttccggaatctccgggaaatgtttcatatcgatgc 488 |||||||||||| ||||||||||| ||| ||||| | |||| ||||| | | ||||| Sbjct: 1724 ttggaaagactattgtcctatggttttcaggaatttaagggagatgttcaagttagatgc 1783 Query: 489 cgcagattacatgatgtccatatgtgggggtgatagtctaaaggagctttcttcacctgg 548 ||||| ||||||||||| |||||||| | |||| | | | ||| ||||||| ||||| Sbjct: 1784 tgcagactacatgatgtctatatgtggcgatgatggcttgagggaaatttcttcccctgg 1843 Query: 549 gaaaagtggcagtattttctatctttcgcaggacgaacgatttgttataaaaacatt 605 ||||||||||||||| ||||| ||||| || ||||| ||||||| ||||| ||||| Sbjct: 1844 gaaaagtggcagtatcttctacctttctcatgacgacagatttgtgataaagacatt 1900 Score = 48.1 bits (24), Expect = 0.035 Identities = 63/76 (82%) Strand = Plus / Plus Query: 261 tctaatgcttaatttgcaactcggcatcaggtataccgtgggtaaaatcacccctgtacc 320 |||||||||||| | |||||||| ||||||||||| || || |||||||| || || || Sbjct: 1556 tctaatgcttaacctccaactcggtatcaggtatactgttgggaaaatcacaccagtgcc 1615 Query: 321 tttgcgtgaagttcgt 336 | ||| ||||||||| Sbjct: 1616 tccgcgggaagttcgt 1631
>gb|AY133824.1| Arabidopsis thaliana clone U10752 putative phosphatidylinositol-4-phosphate 5-kinase (At1g60890) mRNA, complete cds Length = 2341 Score = 89.7 bits (45), Expect = 1e-14 Identities = 144/177 (81%) Strand = Plus / Plus Query: 429 ttggaaagactactgtcctatggtcttccggaatctccgggaaatgtttcatatcgatgc 488 |||||||||||| ||||||||||| ||| ||||| | |||| ||||| | | ||||| Sbjct: 1209 ttggaaagactattgtcctatggttttcaggaatttaagggagatgttcaagttagatgc 1268 Query: 489 cgcagattacatgatgtccatatgtgggggtgatagtctaaaggagctttcttcacctgg 548 ||||| ||||||||||| |||||||| | |||| | | | ||| ||||||| ||||| Sbjct: 1269 tgcagactacatgatgtctatatgtggcgatgatggcttgagggaaatttcttcccctgg 1328 Query: 549 gaaaagtggcagtattttctatctttcgcaggacgaacgatttgttataaaaacatt 605 ||||||||||||||| ||||| ||||| || ||||| ||||||| ||||| ||||| Sbjct: 1329 gaaaagtggcagtatcttctacctttctcatgacgacagatttgtgataaagacatt 1385 Score = 48.1 bits (24), Expect = 0.035 Identities = 63/76 (82%) Strand = Plus / Plus Query: 261 tctaatgcttaatttgcaactcggcatcaggtataccgtgggtaaaatcacccctgtacc 320 |||||||||||| | |||||||| ||||||||||| || || |||||||| || || || Sbjct: 1041 tctaatgcttaacctccaactcggtatcaggtatactgttgggaaaatcacaccagtgcc 1100 Query: 321 tttgcgtgaagttcgt 336 | ||| ||||||||| Sbjct: 1101 tccgcgggaagttcgt 1116
>gb|AY074507.1| Arabidopsis thaliana putative phosphatidylinositol-4-phosphate 5-kinase (At1g60890) mRNA, complete cds Length = 3048 Score = 89.7 bits (45), Expect = 1e-14 Identities = 144/177 (81%) Strand = Plus / Plus Query: 429 ttggaaagactactgtcctatggtcttccggaatctccgggaaatgtttcatatcgatgc 488 |||||||||||| ||||||||||| ||| ||||| | |||| ||||| | | ||||| Sbjct: 1725 ttggaaagactattgtcctatggttttcaggaatttaagggagatgttcaagttagatgc 1784 Query: 489 cgcagattacatgatgtccatatgtgggggtgatagtctaaaggagctttcttcacctgg 548 ||||| ||||||||||| |||||||| | |||| | | | ||| ||||||| ||||| Sbjct: 1785 tgcagactacatgatgtctatatgtggcgatgatggcttgagggaaatttcttcccctgg 1844 Query: 549 gaaaagtggcagtattttctatctttcgcaggacgaacgatttgttataaaaacatt 605 ||||||||||||||| ||||| ||||| || ||||| ||||||| ||||| ||||| Sbjct: 1845 gaaaagtggcagtatcttctacctttctcatgacgacagatttgtgataaagacatt 1901 Score = 48.1 bits (24), Expect = 0.035 Identities = 63/76 (82%) Strand = Plus / Plus Query: 261 tctaatgcttaatttgcaactcggcatcaggtataccgtgggtaaaatcacccctgtacc 320 |||||||||||| | |||||||| ||||||||||| || || |||||||| || || || Sbjct: 1557 tctaatgcttaacctccaactcggtatcaggtatactgttgggaaaatcacaccagtgcc 1616 Query: 321 tttgcgtgaagttcgt 336 | ||| ||||||||| Sbjct: 1617 tccgcgggaagttcgt 1632
>gb|AC018908.8|AC018908 Arabidopsis thaliana chromosome 1 BAC T7P1 genomic sequence, complete sequence Length = 102299 Score = 75.8 bits (38), Expect = 2e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 484 gatgccgcagattacatgatgtccatatgtgggggtgatagtctaaaggagctttcttca 543 ||||| ||||| ||||||||||| |||||||| | |||| | | | ||| ||||||| Sbjct: 9638 gatgctgcagactacatgatgtctatatgtggcgatgatggcttgagggaaatttcttcc 9579 Query: 544 cctgggaaaagtggcagtattttctatctttcgcaggacgaacgatttgttataaaaaca 603 |||||||||||||||||||| ||||| ||||| || ||||| ||||||| ||||| ||| Sbjct: 9578 cctgggaaaagtggcagtatcttctacctttctcatgacgacagatttgtgataaagaca 9519 Query: 604 tt 605 || Sbjct: 9518 tt 9517 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 ttggaaagactactgtcctatggt 452 |||||||||||| ||||||||||| Sbjct: 9844 ttggaaagactattgtcctatggt 9821
>ref|NM_100965.3| Arabidopsis thaliana 1-phosphatidylinositol-4-phosphate 5-kinase AT1G10900 mRNA, complete cds Length = 2604 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 399 tacccctccacactgctctgtcaatttcttttggaaagactactgtcctatggtcttccg 458 ||||||||||||| |||||| | |||| ||||||||||| ||||| ||||| ||| | Sbjct: 1357 tacccctccacacaaatctgtcgacttctcctggaaagactattgtcccatggttttcag 1416 Query: 459 gaatctccgggaaatgtttcatatcgatgccgcagattacatgatgtccatatgtggggg 518 |||| | || | ||||| | | ||||| ||||| ||||||||||| || ||||| | Sbjct: 1417 gaatttaaggcagatgttcaagttagatgctgcagagtacatgatgtctatttgtggtga 1476 Query: 519 tgatagtctaaaggagctttcttcacctgggaaaagtggcagtattttctatctttcgca 578 |||| | || | || ||||||| || ||||||||||||||||| ||||| ||||| || Sbjct: 1477 tgatggcctgacagaaatttcttcccccgggaaaagtggcagtatcttctacctttctca 1536 Query: 579 ggacgaacgatttgt 593 ||||| ||||||| Sbjct: 1537 tgacgacagatttgt 1551
>gb|BT010342.1| Arabidopsis thaliana At1g10900 mRNA, complete cds Length = 2265 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 399 tacccctccacactgctctgtcaatttcttttggaaagactactgtcctatggtcttccg 458 ||||||||||||| |||||| | |||| ||||||||||| ||||| ||||| ||| | Sbjct: 1140 tacccctccacacaaatctgtcgacttctcctggaaagactattgtcccatggttttcag 1199 Query: 459 gaatctccgggaaatgtttcatatcgatgccgcagattacatgatgtccatatgtggggg 518 |||| | || | ||||| | | ||||| ||||| ||||||||||| || ||||| | Sbjct: 1200 gaatttaaggcagatgttcaagttagatgctgcagagtacatgatgtctatttgtggtga 1259 Query: 519 tgatagtctaaaggagctttcttcacctgggaaaagtggcagtattttctatctttcgca 578 |||| | || | || ||||||| || ||||||||||||||||| ||||| ||||| || Sbjct: 1260 tgatggcctgacagaaatttcttcccccgggaaaagtggcagtatcttctacctttctca 1319 Query: 579 ggacgaacgatttgt 593 ||||| ||||||| Sbjct: 1320 tgacgacagatttgt 1334
>emb|AJ009782.1|ATH9782 Arabidopsis thaliana mRNA for phosphatidylinositol-4-phosphate 5-kinase Length = 2563 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 399 tacccctccacactgctctgtcaatttcttttggaaagactactgtcctatggtcttccg 458 ||||||||||||| |||||| | |||| ||||||||||| ||||| ||||| ||| | Sbjct: 1325 tacccctccacacaaatctgtcgacttctcctggaaagactattgtcccatggttttcag 1384 Query: 459 gaatctccgggaaatgtttcatatcgatgccgcagattacatgatgtccatatgtggggg 518 |||| | || | ||||| | | ||||| ||||| ||||||||||| || ||||| | Sbjct: 1385 gaatttaaggcagatgttcaagttagatgctgcagagtacatgatgtctatttgtggtga 1444 Query: 519 tgatagtctaaaggagctttcttcacctgggaaaagtggcagtattttctatctttcgca 578 |||| | || | || ||||||| || ||||||||||||||||| ||||| ||||| || Sbjct: 1445 tgatggcctgacagaaatttcttcccccgggaaaagtggcagtatcttctacctttctca 1504 Query: 579 ggacgaacgatttgt 593 ||||| ||||||| Sbjct: 1505 tgacgacagatttgt 1519
>gb|AY062718.1| Arabidopsis thaliana Unknown protein (At1g10900; T19D16.18) mRNA, complete cds Length = 2598 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 399 tacccctccacactgctctgtcaatttcttttggaaagactactgtcctatggtcttccg 458 ||||||||||||| |||||| | |||| ||||||||||| ||||| ||||| ||| | Sbjct: 1357 tacccctccacacaaatctgtcgacttctcctggaaagactattgtcccatggttttcag 1416 Query: 459 gaatctccgggaaatgtttcatatcgatgccgcagattacatgatgtccatatgtggggg 518 |||| | || | ||||| | | ||||| ||||| ||||||||||| || ||||| | Sbjct: 1417 gaatttaaggcagatgttcaagttagatgctgcagagtacatgatgtctatttgtggtga 1476 Query: 519 tgatagtctaaaggagctttcttcacctgggaaaagtggcagtattttctatctttcgca 578 |||| | || | || ||||||| || ||||||||||||||||| ||||| ||||| || Sbjct: 1477 tgatggcctgacagaaatttcttcccccgggaaaagtggcagtatcttctacctttctca 1536 Query: 579 ggacgaacgatttgt 593 ||||| ||||||| Sbjct: 1537 tgacgacagatttgt 1551
>emb|BX816782.1|CNS0AAOI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH68ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1491 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 399 tacccctccacactgctctgtcaatttcttttggaaagactactgtcctatggtcttccg 458 ||||||||||||| |||||| | |||| ||||||||||| ||||| ||||| ||| | Sbjct: 295 tacccctccacacaaatctgtcgacttctcctggaaagactattgtcccatggttttcag 354 Query: 459 gaatctccgggaaatgtttcatatcgatgccgcagattacatgatgtccatatgtggggg 518 |||| | || | ||||| | | ||||| ||||| ||||||||||| || ||||| | Sbjct: 355 gaatttaaggcagatgttcaagttagatgctgcagagtacatgatgtctatttgtggtga 414 Query: 519 tgatagtctaaaggagctttcttcacctgggaaaagtggcagtattttctatctttcgca 578 |||| | || | || ||||||| || ||||||||||||||||| ||||| ||||| || Sbjct: 415 tgatggcctgacagaaatttcttcccccgggaaaagtggcagtatcttctacctttctca 474 Query: 579 ggacgaacgatttgt 593 ||||| ||||||| Sbjct: 475 tgacgacagatttgt 489
>gb|U95973.1|U95973 Arabidopsis thaliana chromosome 1 BAC T19D16 genomic sequence, complete sequence Length = 115641 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 536 tttcttcacctgggaaaagtggcagtattttctatctttcgcaggacgaacgatttgt 593 ||||||| || ||||||||||||||||| ||||| ||||| || ||||| ||||||| Sbjct: 93806 tttcttcccccgggaaaagtggcagtatcttctacctttctcatgacgacagatttgt 93863
>gb|BC051865.2| Homo sapiens glycogen synthase kinase 3 alpha, mRNA (cDNA clone MGC:60234 IMAGE:6171438), complete cds Length = 2189 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctatttacaagggacacaggag 254 |||||||||||||||||||||| Sbjct: 1886 ctatttacaagggacacaggag 1865
>ref|NM_019884.2| Homo sapiens glycogen synthase kinase 3 alpha (GSK3A), mRNA Length = 2200 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctatttacaagggacacaggag 254 |||||||||||||||||||||| Sbjct: 1897 ctatttacaagggacacaggag 1876
>ref|XM_541590.2| PREDICTED: Canis familiaris similar to Glycogen synthase kinase-3 alpha (GSK-3 alpha), transcript variant 1 (LOC484476), mRNA Length = 1922 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctatttacaagggacacaggag 254 |||||||||||||||||||||| Sbjct: 1642 ctatttacaagggacacaggag 1621
>gb|DQ455154.1| Medicago truncatula cDNA-AFLP fragment BC23M44_83 sequence Length = 369 Score = 44.1 bits (22), Expect = 0.55 Identities = 124/158 (78%) Strand = Plus / Minus Query: 403 cctccacactgctctgtcaatttcttttggaaagactactgtcctatggtcttccggaat 462 ||||||||||| ||||| | |||| |||||||| || || |||||||||||| ||||| Sbjct: 222 cctccacactgttctgtagacttctactggaaagattattgccctatggtcttcaggaat 163 Query: 463 ctccgggaaatgtttcatatcgatgccgcagattacatgatgtccatatgtgggggtgat 522 | | |||||||| | | ||||| || || |||||||||||||| ||||| | | Sbjct: 162 ttgagagaaatgttcaaattggatgcggccgagtacatgatgtccatttgtggtgactgt 103 Query: 523 agtctaaaggagctttcttcacctgggaaaagtggcag 560 ||||||||| | ||||||||||| ||||||||||| Sbjct: 102 gctctaaaggacatatcttcacctggaaaaagtggcag 65
>emb|CR749620.1| Homo sapiens mRNA; cDNA DKFZp686D0638 (from clone DKFZp686D0638) Length = 3536 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctatttacaagggacacaggag 254 |||||||||||||||||||||| Sbjct: 3245 ctatttacaagggacacaggag 3224
>gb|AC158737.14| Medicago truncatula clone mth2-154f20, complete sequence Length = 114538 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 268 cttaatttgcaactcggcatcaggta 293 |||||||||||||| ||||||||||| Sbjct: 55814 cttaatttgcaacttggcatcaggta 55789
>emb|CR615336.1| full-length cDNA clone CS0DC012YP11 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 2119 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctatttacaagggacacaggag 254 |||||||||||||||||||||| Sbjct: 1870 ctatttacaagggacacaggag 1849
>emb|CR597295.1| full-length cDNA clone CS0DF022YM11 of Fetal brain of Homo sapiens (human) Length = 1760 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctatttacaagggacacaggag 254 |||||||||||||||||||||| Sbjct: 1495 ctatttacaagggacacaggag 1474
>emb|CR593340.1| full-length cDNA clone CS0DK005YF06 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 2124 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctatttacaagggacacaggag 254 |||||||||||||||||||||| Sbjct: 1880 ctatttacaagggacacaggag 1859
>gb|AC103710.2| Homo sapiens chromosome 11, clone CTD-2379P15, complete sequence Length = 151970 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 ttttgttgatgattctggaaat 24 |||||||||||||||||||||| Sbjct: 29095 ttttgttgatgattctggaaat 29116
>gb|AC011711.8| Homo sapiens chromosome 11, clone RP11-309J20, complete sequence Length = 149542 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 ttttgttgatgattctggaaat 24 |||||||||||||||||||||| Sbjct: 98352 ttttgttgatgattctggaaat 98373
>gb|AC006486.1|AC006486 Homo sapiens chromosome 19, BAC CIT-B-147B23 (BC85722), complete sequence Length = 111084 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 233 ctatttacaagggacacaggag 254 |||||||||||||||||||||| Sbjct: 22323 ctatttacaagggacacaggag 22344
>gb|BC027984.1| Homo sapiens glycogen synthase kinase 3 alpha, mRNA (cDNA clone MGC:40141 IMAGE:3903896), complete cds Length = 2208 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctatttacaagggacacaggag 254 |||||||||||||||||||||| Sbjct: 1916 ctatttacaagggacacaggag 1895
>gb|L40027.1|HUMGLYSYN Homo sapiens glycogen synthase kinase 3 mRNA, complete cds Length = 2169 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctatttacaagggacacaggag 254 |||||||||||||||||||||| Sbjct: 1892 ctatttacaagggacacaggag 1871
>dbj|D63424.1| Homo sapiens mRNA for glycogen synthase kinase 3alpha, complete cds Length = 2154 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 233 ctatttacaagggacacaggag 254 |||||||||||||||||||||| Sbjct: 1869 ctatttacaagggacacaggag 1848
>gb|AC135292.2| Mus musculus BAC clone RP23-153N21 from chromosome 15, complete sequence Length = 206967 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gtttacagaacagtgatgttcataa 95 ||||||||||||||||| ||||||| Sbjct: 39017 gtttacagaacagtgattttcataa 38993
>emb|CR626910.5| Zebrafish DNA sequence from clone DKEY-204E20 in linkage group 14, complete sequence Length = 168298 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 tgtccatatgtgggggtgata 523 ||||||||||||||||||||| Sbjct: 32020 tgtccatatgtgggggtgata 32040
>emb|AL596209.13| Mouse DNA sequence from clone RP23-278F12 on chromosome 11 Contains the 3' end of the Ulk2 gene for Unc-51 like kinase 2 (C. elegans), the Prpsap2 gene for phosphoribosyl pyrophosphate synthetase-associated protein 2, the gene for a novel sodium/glucose cotransporter protein, the gene for a novel protein (2310040C09Rik), the Grap gene for GRB2-related adaptor protein and a CpG island, complete sequence Length = 186359 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 caaaaacaagaaagagggcca 225 ||||||||||||||||||||| Sbjct: 145021 caaaaacaagaaagagggcca 145041
>emb|BX510651.9| Zebrafish DNA sequence from clone DKEY-232A10 in linkage group 23, complete sequence Length = 74936 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 592 gttataaaaacattgagaaag 612 ||||||||||||||||||||| Sbjct: 26406 gttataaaaacattgagaaag 26386
>emb|BX663616.13| Zebrafish DNA sequence from clone DKEY-287H22 in linkage group 7, complete sequence Length = 150010 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 cattcaggaatgttggacagt 180 ||||||||||||||||||||| Sbjct: 92387 cattcaggaatgttggacagt 92367
>emb|BX255941.9| Zebrafish DNA sequence from clone BUSM1-182C22 in linkage group 23, complete sequence Length = 107132 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 592 gttataaaaacattgagaaag 612 ||||||||||||||||||||| Sbjct: 31825 gttataaaaacattgagaaag 31805
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 caaaaggcaaacattcaggaa 169 ||||||||||||||||||||| Sbjct: 19271015 caaaaggcaaacattcaggaa 19271035
>emb|BX293534.6| Zebrafish DNA sequence from clone CH211-108P13 in linkage group 23, complete sequence Length = 37346 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 592 gttataaaaacattgagaaag 612 ||||||||||||||||||||| Sbjct: 21124 gttataaaaacattgagaaag 21144
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0685B10 Length = 148544 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 caaaaggcaaacattcaggaa 169 ||||||||||||||||||||| Sbjct: 458 caaaaggcaaacattcaggaa 478
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 caaaaggcaaacattcaggaa 169 ||||||||||||||||||||| Sbjct: 44028 caaaaggcaaacattcaggaa 44048
>emb|AL732635.7| Zebrafish DNA sequence from clone CH211-231L18 in linkage group 7, complete sequence Length = 83703 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 cattcaggaatgttggacagt 180 ||||||||||||||||||||| Sbjct: 17574 cattcaggaatgttggacagt 17594
>emb|AL672081.6| Mouse DNA sequence from clone RP23-319D17 on chromosome X, complete sequence Length = 194141 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 589 tttgttataaaaacattgagaaaga 613 ||||||||||||||| ||||||||| Sbjct: 38481 tttgttataaaaacaatgagaaaga 38505
>gb|AC109296.16| Mus musculus chromosome 1, clone RP24-240J15, complete sequence Length = 161257 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 aaaatacctggcaaaaacaagaaa 217 |||||||||||||| ||||||||| Sbjct: 20435 aaaatacctggcaataacaagaaa 20458
>gb|AC150432.2| Branchiostoma floridae clone CH302-9D15, complete sequence Length = 173785 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 attttctaatgcttaatttgcaac 280 ||||||| |||||||||||||||| Sbjct: 21306 attttcttatgcttaatttgcaac 21283
>ref|NM_008845.2| Mus musculus phosphatidylinositol-4-phosphate 5-kinase, type II, alpha (Pip5k2a), mRNA Length = 3470 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 439 tactgtcctatggtcttccggaatctccggga 470 ||||| || ||||||||||||||||| ||||| Sbjct: 406 tactgcccaatggtcttccggaatctgcggga 437
>gb|AC093195.2| Drosophila melanogaster clone BACR16J09, complete sequence Length = 178863 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 cctatggtcttccggaatctccgg 468 ||||||||||| |||||||||||| Sbjct: 165971 cctatggtctttcggaatctccgg 165994
>gb|BT015222.1| Drosophila melanogaster RE35801 full insert cDNA Length = 6248 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 cctatggtcttccggaatctccgg 468 ||||||||||| |||||||||||| Sbjct: 2092 cctatggtctttcggaatctccgg 2115
>gb|AC008328.6| Drosophila melanogaster clone BACR09A04, complete sequence Length = 166722 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 cctatggtcttccggaatctccgg 468 ||||||||||| |||||||||||| Sbjct: 124218 cctatggtctttcggaatctccgg 124241
>gb|AC150210.1| Pan troglodytes chromosome X clone RP43-051H11 map human ortholog p21.3, complete sequence Length = 188797 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ggtgaaacacaggaaaatac 200 |||||||||||||||||||| Sbjct: 102160 ggtgaaacacaggaaaatac 102179
>gb|AC140460.3| Mus musculus BAC clone RP24-151D4 from chromosome 9, complete sequence Length = 196545 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 gttataaaaacattgagaaa 611 |||||||||||||||||||| Sbjct: 183849 gttataaaaacattgagaaa 183830
>gb|AC161280.2| Pan troglodytes BAC clone CH251-392H4 from chromosome 7, complete sequence Length = 190939 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 cgtgggtaaaatcacccctg 316 |||||||||||||||||||| Sbjct: 23279 cgtgggtaaaatcacccctg 23298
>gb|AC161123.3| Pan troglodytes BAC clone CH251-618D5 from chromosome 7, complete sequence Length = 190856 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 cgtgggtaaaatcacccctg 316 |||||||||||||||||||| Sbjct: 88201 cgtgggtaaaatcacccctg 88220
>gb|AC161111.2| Mus musculus chromosome 15, clone RP23-50B6, complete sequence Length = 200074 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 attttctaatgcttaatttg 276 |||||||||||||||||||| Sbjct: 183494 attttctaatgcttaatttg 183475
>gb|AC115064.9| Mus musculus chromosome 1, clone RP24-401B18, complete sequence Length = 184893 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 aaaatacctggcaaaaacaagaaa 217 |||||||||||||| ||||||||| Sbjct: 132489 aaaatacctggcaataacaagaaa 132512
>gb|AC107837.11| Mus musculus chromosome 1, clone RP23-272H13, complete sequence Length = 189415 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 caggaaaatacctggcaaaa 209 |||||||||||||||||||| Sbjct: 18982 caggaaaatacctggcaaaa 18963
>gb|AC128698.4| Mus musculus BAC clone RP24-127J4 from chromosome 9, complete sequence Length = 148461 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 aaaatacctggcaaaaacaa 213 |||||||||||||||||||| Sbjct: 91947 aaaatacctggcaaaaacaa 91966
>gb|AC126611.3| Mus musculus BAC clone RP23-316N22 from chromosome 14, complete sequence Length = 177469 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 aaatcacccctgtacctttg 324 |||||||||||||||||||| Sbjct: 17752 aaatcacccctgtacctttg 17733
>gb|AC098885.3| Mus musculus BAC clone RP23-122L17 from 5, complete sequence Length = 211112 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 tggcagtattttctatcttt 574 |||||||||||||||||||| Sbjct: 176707 tggcagtattttctatcttt 176688
>emb|AL691426.9| Human DNA sequence from clone RP11-787B4 on chromosome 9 Contains the 5' end of the PAPPA gene for pregnancy-associated plasma protein A, a novel gene and a CpG island, complete sequence Length = 182777 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 aaaaacaagaaagagggcca 225 |||||||||||||||||||| Sbjct: 34927 aaaaacaagaaagagggcca 34908
>emb|AL356058.39| Human DNA sequence from clone RP11-465B24 on chromosome Xp11.1-11.22, complete sequence Length = 107633 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 acctggcaaaaacaagaaagaggg 222 ||||||||||||||||||| |||| Sbjct: 68390 acctggcaaaaacaagaaataggg 68367
>emb|AL356319.18| Human DNA sequence from clone RP11-810G21 on chromosome 13 Contains a CpG island, complete sequence Length = 137260 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 atttgttataaaaacattga 607 |||||||||||||||||||| Sbjct: 112813 atttgttataaaaacattga 112832
>emb|AL031466.2|HS653H13 Human DNA sequence from clone RP4-653H13 on chromosome Xp11.4-21.3 Contains part of the IL1RAPL1 gene for interleukin 1 receptor accessory protein-like 1 and a CpG island, complete sequence Length = 122269 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ggtgaaacacaggaaaatac 200 |||||||||||||||||||| Sbjct: 27191 ggtgaaacacaggaaaatac 27210
>gb|AC161805.4| Mus musculus chromosome 1, clone RP24-325N3, complete sequence Length = 192649 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 caggaaaatacctggcaaaa 209 |||||||||||||||||||| Sbjct: 1958 caggaaaatacctggcaaaa 1977
>emb|BX510302.7| Zebrafish DNA sequence from clone RP71-81M21, complete sequence Length = 155767 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ctattttctaatgcttaatt 274 |||||||||||||||||||| Sbjct: 124597 ctattttctaatgcttaatt 124578
>ref|NM_164773.1| Drosophila melanogaster Laminin B1 CG7123-RB, transcript variant B (LanB1), mRNA Length = 5935 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 cctatggtcttccggaatctccgg 468 ||||||||||| |||||||||||| Sbjct: 1792 cctatggtctttcggaatctccgg 1815
>ref|NM_057270.3| Drosophila melanogaster Laminin B1 CG7123-RA, transcript variant A (LanB1), mRNA Length = 6236 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 cctatggtcttccggaatctccgg 468 ||||||||||| |||||||||||| Sbjct: 2093 cctatggtctttcggaatctccgg 2116
>ref|NM_053926.1| Rattus norvegicus phosphatidylinositol-4-phosphate 5-kinase, type II, alpha (Pip5k2a), mRNA Length = 1914 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 439 tactgtcctatggtcttccggaatctccggga 470 ||||| || ||||||||||||||||| ||||| Sbjct: 373 tactgcccgatggtcttccggaatcttcggga 404
>gb|M95811.1|DROCANS Drosophila melanogaster laminin B1 chain (laminin B1 chain) gene, complete cds Length = 11784 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 cctatggtcttccggaatctccgg 468 ||||||||||| |||||||||||| Sbjct: 6102 cctatggtctttcggaatctccgg 6125
>dbj|AK040558.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430106I07 product:phosphatidylinositol-4-phosphate 5-kinase, type II, alpha, full insert sequence Length = 3362 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 439 tactgtcctatggtcttccggaatctccggga 470 ||||| || ||||||||||||||||| ||||| Sbjct: 293 tactgcccaatggtcttccggaatctgcggga 324
>dbj|AK012196.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610529P09 product:phosphatidylinositol-4-phosphate 5-kinase, type II, alpha, full insert sequence Length = 3470 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 439 tactgtcctatggtcttccggaatctccggga 470 ||||| || ||||||||||||||||| ||||| Sbjct: 406 tactgcccaatggtcttccggaatctgcggga 437
>gb|AC008329.3|AC008329 Drosophila melanogaster, chromosome 2L, region 28C-28D, BAC clone BACR31D05, complete sequence Length = 172633 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 cctatggtcttccggaatctccgg 468 ||||||||||| |||||||||||| Sbjct: 24975 cctatggtctttcggaatctccgg 24998
>gb|AC156799.2| Mus musculus BAC clone RP23-341L15 from chromosome 9, complete sequence Length = 214455 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 gttataaaaacattgagaaa 611 |||||||||||||||||||| Sbjct: 42983 gttataaaaacattgagaaa 42964
>gb|AC115001.11| Mus musculus chromosome 1, clone RP24-128M9, complete sequence Length = 138851 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 caggaaaatacctggcaaaa 209 |||||||||||||||||||| Sbjct: 15464 caggaaaatacctggcaaaa 15483
>gb|AC009410.3| Homo sapiens BAC clone RP11-335M11 from 2, complete sequence Length = 189812 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 598 aaaacattgagaaagagtga 617 |||||||||||||||||||| Sbjct: 14191 aaaacattgagaaagagtga 14172
>gb|BC011097.1| Mus musculus phosphatidylinositol-4-phosphate 5-kinase, type II, alpha, mRNA (cDNA clone MGC:18357 IMAGE:3672732), complete cds Length = 2678 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 439 tactgtcctatggtcttccggaatctccggga 470 ||||| || ||||||||||||||||| ||||| Sbjct: 350 tactgcccaatggtcttccggaatctgcggga 381
>gb|AE003618.3| Drosophila melanogaster chromosome 2L, section 27 of 83 of the complete sequence Length = 268661 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 cctatggtcttccggaatctccgg 468 ||||||||||| |||||||||||| Sbjct: 263965 cctatggtctttcggaatctccgg 263988
>dbj|AP006254.1| Homo sapiens genomic DNA, chromosome 9, clone:RP11-145L23, complete sequence Length = 194718 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 aaaaacaagaaagagggcca 225 |||||||||||||||||||| Sbjct: 109386 aaaaacaagaaagagggcca 109367
>gb|AC100746.4| Mus musculus chromosome 5, clone RP24-399G21, complete sequence Length = 157682 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 tggcagtattttctatcttt 574 |||||||||||||||||||| Sbjct: 133750 tggcagtattttctatcttt 133769
>gb|AC004722.1|AC004722 Drosophila melanogaster DNA sequence (P1 DS02760 (D286)), complete sequence Length = 76619 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 cctatggtcttccggaatctccgg 468 ||||||||||| |||||||||||| Sbjct: 66973 cctatggtctttcggaatctccgg 66996
>gb|AC134244.4| Mus musculus BAC clone RP24-218O13 from 14, complete sequence Length = 220538 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 aaatcacccctgtacctttg 324 |||||||||||||||||||| Sbjct: 188527 aaatcacccctgtacctttg 188508
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 caaaaacaagaaagagggcc 224 |||||||||||||||||||| Sbjct: 3076555 caaaaacaagaaagagggcc 3076536
>emb|AL928653.4| Mouse DNA sequence from clone RP23-410F9 on chromosome 2, complete sequence Length = 72045 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 439 tactgtcctatggtcttccggaatctccggga 470 ||||| || ||||||||||||||||| ||||| Sbjct: 37687 tactgcccaatggtcttccggaatctgcggga 37656
>gb|M19525.1|DROLAMB1 D.melanogaster laminin B1 subunit mRNA, complete cds Length = 6138 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 cctatggtcttccggaatctccgg 468 ||||||||||| |||||||||||| Sbjct: 1976 cctatggtctttcggaatctccgg 1999
>dbj|AB032899.1| Rattus norvegicus PIPK2 alpha mRNA for phosphatidylinositol 5-phosphate 4-kinase alpha, complete cds Length = 1914 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 439 tactgtcctatggtcttccggaatctccggga 470 ||||| || ||||||||||||||||| ||||| Sbjct: 373 tactgcccgatggtcttccggaatcttcggga 404
>dbj|AB009615.1| Mus musculus mRNA for type II phosphatidylinositolphosphate kinase-alpha, complete cds Length = 1515 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 439 tactgtcctatggtcttccggaatctccggga 470 ||||| || ||||||||||||||||| ||||| Sbjct: 328 tactgcccaatggtcttccggaatctgcggga 359
>dbj|AB020876.1| Homo sapiens genomic DNA of 9q32 anti-oncogene of flat epitherium cancer , segment 8/10 Length = 100000 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 aaaaacaagaaagagggcca 225 |||||||||||||||||||| Sbjct: 67619 aaaaacaagaaagagggcca 67600 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,094,565 Number of Sequences: 3902068 Number of extensions: 6094565 Number of successful extensions: 123490 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 123160 Number of HSP's gapped (non-prelim): 326 length of query: 629 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 606 effective length of database: 17,143,297,704 effective search space: 10388838408624 effective search space used: 10388838408624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)