>MTB1_BACSQ (Q9LAI2) Modification methylase BslI (EC 2.1.1.113) (N-4|
           cytosine-specific methyltransferase BslI) (M.BslI)
          Length = 912

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 174 RKTPCLGDDAPGCGTRRRTVSSSPELYDVGT*CRTSRCPDHRRAGR 37
           R+ PC     P CG+   + +S PE+ +    C++  CPD  ++ R
Sbjct: 466 RRIPC-----PSCGSLNISGNSYPEINNRSWECKSPYCPDRSKSNR 506

>VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A)|
          Length = 605

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 54  DQGNDSCDIKCQ-HHKVPARKKQCVDECHSREHHHPSRASCERXCXHWRDPAWKE 215
           D+    C  +CQ   + P RK+QCV EC  +    P +   E     WR+   +E
Sbjct: 119 DKQFKECQQRCQWQEQRPERKQQCVKECREQYQEDPWKGEREN---KWREEEEEE 170

>VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B)|
          Length = 588

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = +3

Query: 81  KCQHH-----KVPARKKQCVDECHSREHHHPSRASCE 176
           +CQ H     + P RK+QCV EC  R   +P R   E
Sbjct: 126 ECQQHCHQQEQRPERKQQCVRECRERYQENPWRRERE 162

>TICN1_MOUSE (Q62288) Testican-1 precursor (SPOCK protein)|
          Length = 442

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
 Frame = +3

Query: 21  WRXXEVGRPVD---DQGNDSC-DIKCQHHKVPARKKQCVDECHSREHHHPSRASCERXCX 188
           +R     +P D   D   D C  +KC  HKV   +      C SR+H  P +        
Sbjct: 69  FRNWNPNKPFDQALDPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNVAHK 128

Query: 189 HWRDPAWKEQC 221
           HW  P+   +C
Sbjct: 129 HWLGPSNLVKC 139

>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)|
          Length = 1391

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +3

Query: 72   CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERXCXHWRDPAWKEQCVQQCMR 239
            C+ + +  K  A KKQC +E   +E     +  CE      ++ A K+QC ++  +
Sbjct: 1064 CEERAKKLKEAAEKKQC-EERAKKEKEAAEKKQCEERAKKLKEAAEKKQCEERAKK 1118



 Score = 28.1 bits (61), Expect = 6.3
 Identities = 15/61 (24%), Positives = 27/61 (44%)
 Frame = +3

Query: 57   QGNDSCDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERXCXHWRDPAWKEQCVQQCM 236
            +G   C    +  K  A KK+C  E   +E    ++  CE      ++ A K+QC ++  
Sbjct: 963  KGKKKCKKLGKKSKRAAEKKKCA-EAAKKEKEAATKKKCEERAKKQKEAAEKKQCEERAK 1021

Query: 237  R 239
            +
Sbjct: 1022 K 1022

>YITN_BACSU (O06749) Hypothetical protein yitN|
          Length = 122

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -1

Query: 215 FLPCRVSPMXTXPLARRPAWVMMLPAVALVDALFLPRRNFMMLAL 81
           F      P+ T P    P W  +L  + +  ALF P++++ ++ +
Sbjct: 20  FFQALTKPIVTSPFVVIPTWGTLLVQIVIFAALFAPKKHWRLILI 64

>TICN1_HUMAN (Q08629) Testican-1 precursor (SPOCK protein)|
          Length = 439

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
 Frame = +3

Query: 21  WRXXEVGRPVD---DQGNDSC-DIKCQHHKVPARKKQCVDECHSREHHHPSRASCERXCX 188
           +R     +P D   D   D C  +KC  HKV   +      C SR+H  P +        
Sbjct: 66  FRNWNPNKPFDQALDPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNVAQK 125

Query: 189 HWRDPAWKEQC 221
           HW  P+   +C
Sbjct: 126 HWVGPSNLVKC 136

>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific|
           proteoglycan core protein) (CSPCP)
          Length = 2132

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -3

Query: 177 SRKTPCLGDDAPGCGTRRRTVSSSPELYDV 88
           S +TPC+GD     G R   V  S E YDV
Sbjct: 549 SPRTPCVGDKDSSPGVRTYRVRPSSETYDV 578

>PGCA_HUMAN (P16112) Aggrecan core protein precursor (Cartilage-specific|
           proteoglycan core protein) (CSPCP) (Chondroitin sulfate
           proteoglycan core protein 1) [Contains: Aggrecan core
           protein 2]
          Length = 2415

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -3

Query: 177 SRKTPCLGDDAPGCGTRRRTVSSSPELYDV 88
           S +TPC+GD     G R   V  S E YDV
Sbjct: 540 SPRTPCVGDKDSSPGVRTYGVRPSTETYDV 569

>VWF_MOUSE (Q8CIZ8) Von Willebrand factor precursor (vWF) [Contains: Von|
            Willebrand antigen II]
          Length = 2813

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 69   SCDIKCQHHKVPARKKQCVDECHSREHHHPSR 164
            +C + CQH +  A   QCV+ CH+  H  P R
Sbjct: 1152 ACPVTCQHPEPLACPVQCVEGCHA--HCPPGR 1181

>PGCA_RAT (P07897) Aggrecan core protein precursor (Cartilage-specific|
           proteoglycan core protein) (CSPCP)
          Length = 2124

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -3

Query: 177 SRKTPCLGDDAPGCGTRRRTVSSSPELYDV 88
           S +TPC+GD     G R   V  S E YDV
Sbjct: 549 SPRTPCVGDKDSSPGVRTYGVRPSSETYDV 578

>VWF_HUMAN (P04275) Von Willebrand factor precursor (vWF) [Contains: Von|
            Willebrand antigen II]
          Length = 2813

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 69   SCDIKCQHHKVPARKKQCVDECHS 140
            +C + CQH +  A   QCV+ CH+
Sbjct: 1152 ACQVTCQHPEPLACPVQCVEGCHA 1175

>VWF_CANFA (Q28295) Von Willebrand factor precursor (vWF)|
          Length = 2813

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 69   SCDIKCQHHKVPARKKQCVDECHS 140
            +C I CQH +  A   QCV+ CH+
Sbjct: 1152 ACPITCQHPEPLACPVQCVEGCHA 1175

>MACA1_RHOOP (O84992) Maleylacetate reductase 1 (EC 1.3.1.32) (Maleylacetate|
           reductase I)
          Length = 357

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -3

Query: 228 AARTVPSMPGLSNXXXSSRKTPCLGDDAPGCGTRRRTVSSSPE--LYDV 88
           AART      L      S  TP LG+   G  T R T++  PE  +YDV
Sbjct: 109 AARTGVDQVILPTTYAGSEVTPVLGETVEGRKTTRSTLAVLPETVIYDV 157

>ECAR_ECHCA (Q90495) Ecarin precursor (EC 3.4.24.-)|
          Length = 616

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +3

Query: 42  RPVDDQGNDSCDIKCQHHKVPARKKQCVDECHSREHHHPSRASCER 179
           +P  + GN  C  KC+  K     +   D+C   EH     A C R
Sbjct: 440 KPGAECGNGECCDKCKIRKAGTECRPARDDCDVAEHCTGQSAECPR 485

>INSR_AEDAE (Q93105) Insulin-like receptor precursor (EC 2.7.10.1) (MIR)|
           [Contains: Insulin-like receptor alpha chain;
           Insulin-like receptor beta chain]
          Length = 1390

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +3

Query: 72  CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERXCXHWR-DPAWKEQCVQQC 233
           C   C    V    + C+  C+      P+ +SC   C H   DPA K QCV +C
Sbjct: 233 CPKACSKTGVCCDAESCLGGCNL-----PNTSSCS-VCRHLSIDPAGKRQCVAKC 281

>RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-associated|
           exchange factor for Rab5) (Rabex-5)
          Length = 708

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 96  KVPARKKQCVDECHSREHHHPSRASCERXCXHWRDPAWKEQCVQQCMR 239
           +V +RKK  +       H   S   C++ C ++ +PAW+  C  +C R
Sbjct: 132 QVVSRKKMSLKSERRGIHVDQSDLLCKKGCGYYGNPAWQGFC-SKCWR 178


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,397,035
Number of Sequences: 219361
Number of extensions: 623195
Number of successful extensions: 1639
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1639
length of database: 80,573,946
effective HSP length: 58
effective length of database: 67,851,008
effective search space used: 1628424192
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)