| Clone Name | bags23f18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|AY108613.1| Zea mays PCO091786 mRNA sequence | 72 | 9e-10 | 2 | gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence | 40 | 3.2 | 3 | gb|AC002553.2| Homo sapiens chromosome , clone CTC-529I10, compl... | 40 | 3.2 | 4 | gb|AE004725.1| Pseudomonas aeruginosa PAO1, section 286 of 529 o... | 40 | 3.2 |
|---|
>gb|AY108613.1| Zea mays PCO091786 mRNA sequence Length = 597 Score = 71.9 bits (36), Expect = 9e-10 Identities = 95/115 (82%) Strand = Plus / Plus Query: 71 gtgcgacatcaagtgccaacatcataaagttccggcgaggaagaaacagtgcgtcgacga 130 |||||||||||||||||| ||||| | | ||||| |||| | | |||||||| || || Sbjct: 144 gtgcgacatcaagtgccagcatcacagcgacccggccaggaggcagcagtgcgtggatga 203 Query: 131 gtgccacagccgggagcatcatcacccaagcagggcgtcttgcgagaggaantgt 185 |||||| ||||||||||| |||||||| ||||| | || |||||||| ||| ||| Sbjct: 204 gtgccatagccgggagcaccatcaccctagcagagagttttgcgagatgaagtgt 258
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gtcggccggcccgtcgatga 55 |||||||||||||||||||| Sbjct: 232442 gtcggccggcccgtcgatga 232423
>gb|AC002553.2| Homo sapiens chromosome , clone CTC-529I10, complete sequence Length = 158314 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 gacatcaagtgccaacatca 94 |||||||||||||||||||| Sbjct: 60849 gacatcaagtgccaacatca 60868
>gb|AE004725.1| Pseudomonas aeruginosa PAO1, section 286 of 529 of the complete genome Length = 10218 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cggccggcccgtcgatgatc 57 |||||||||||||||||||| Sbjct: 1442 cggccggcccgtcgatgatc 1423 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,401,497 Number of Sequences: 3902068 Number of extensions: 1401497 Number of successful extensions: 26532 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 26503 Number of HSP's gapped (non-prelim): 28 length of query: 248 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 226 effective length of database: 17,147,199,772 effective search space: 3875267148472 effective search space used: 3875267148472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)