ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags23f16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BC047916.1| Homo sapiens signal peptide, CUB domain, EGF-like 1, mRNA (cDNA clone IMAGE:6189117), complete cds Length = 2293 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 26 acgcccgcacgcccgcacgcc 46
>gb|AY263772.1| Seepiophila jonesi clone E2-2A microsatellite sequence Length = 208 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 108 acgcccgcacgcccgcacgcc 128 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 100 acgcccgcacgcccgcacgcc 120
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 36.2 bits (18), Expect = 4.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 18 cgcctcccctgaccggcg 35 |||||||||||||||||| Sbjct: 1690221 cgcctcccctgaccggcg 1690204
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 10962917 acgcccgcacgcccgcacgcc 10962937 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 10962909 acgcccgcacgcccgcacgcc 10962929
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Minus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 18120 acgcccgcacgcccgcacgcc 18100 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Minus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 18112 acgcccgcacgcccgcacgcc 18092
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 10961018 acgcccgcacgcccgcacgcc 10961038 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 10961010 acgcccgcacgcccgcacgcc 10961030
>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence Length = 201379 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 137605 acgcccgcacgcccgcacgcc 137625 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 137597 acgcccgcacgcccgcacgcc 137617
>gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, complete sequence Length = 192344 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 13220 acgcccgcacgcccgcacgcc 13240 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 13212 acgcccgcacgcccgcacgcc 13232
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 7740 acgcccgcacgcccgcacgcc 7760 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 acgcccgcacgcccgnacgcc 21 ||||||||||||||| ||||| Sbjct: 7732 acgcccgcacgcccgcacgcc 7752
>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence Length = 53591 Score = 36.2 bits (18), Expect = 4.9 Identities = 20/21 (95%) Strand = Plus / Minus Query: 2 cgcccgcacgcccgnacgcct 22 |||||||||||||| |||||| Sbjct: 19843 cgcccgcacgcccgcacgcct 19823 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 91,136 Number of Sequences: 3902068 Number of extensions: 91136 Number of successful extensions: 22837 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 22719 Number of HSP's gapped (non-prelim): 114 length of query: 42 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 22 effective length of database: 17,155,003,908 effective search space: 377410085976 effective search space used: 377410085976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
