ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags23f12 |
|---|---|
| Clone Library Name | barley_pub |
>NACA1_ARATH (Q9LHG9) Nascent polypeptide-associated complex alpha subunit-like| protein 1 (NAC-alpha-like protein 1) (Alpha-NAC-like protein 1) Length = 203 Score = 153 bits (386), Expect = 5e-37 Identities = 84/120 (70%), Positives = 89/120 (74%), Gaps = 1/120 (0%) Frame = +2 Query: 278 ASGXXXXXXXXXXXXXAMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVI 457 A G AMLKLGMK ITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVI Sbjct: 53 AGGKSKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVI 112 Query: 458 FGEAKIEDXXXXXXXXXXEQFKAPDLSSVISNPEASTAA-QEDDEDCDETGVEPKDIELV 634 FGEAKIED EQFKAPDLS+VIS E+S+AA +DDE+ DE GVEPKDIELV Sbjct: 113 FGEAKIEDLSSQIQSQAAEQFKAPDLSNVISKGESSSAAVVQDDEEVDEEGVEPKDIELV 172
>NACA_PINTA (Q9M612) Nascent polypeptide-associated complex alpha subunit-like| protein (NAC-alpha-like protein) (Alpha-NAC-like protein) Length = 205 Score = 150 bits (378), Expect = 4e-36 Identities = 74/103 (71%), Positives = 84/103 (81%) Frame = +2 Query: 326 AMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXX 505 AMLKLGMK ++GVSRVT+KKSKNILFVIS PDVFKSP SDTY+ FGEAKIED Sbjct: 72 AMLKLGMKPVSGVSRVTIKKSKNILFVISNPDVFKSPTSDTYIAFGEAKIEDLSSQLQTQ 131 Query: 506 XXEQFKAPDLSSVISNPEASTAAQEDDEDCDETGVEPKDIELV 634 EQFKAP+LS V PE+STAAQED+++ D+TGVEPKDIELV Sbjct: 132 AAEQFKAPNLSHVTMKPESSTAAQEDEDEVDDTGVEPKDIELV 174
>NACA3_ARATH (Q6ICZ8) Nascent polypeptide-associated complex alpha subunit-like| protein 3 (NAC-alpha-like protein 3) (Alpha-NAC-like protein 3) Length = 204 Score = 149 bits (377), Expect = 5e-36 Identities = 83/125 (66%), Positives = 88/125 (70%), Gaps = 6/125 (4%) Frame = +2 Query: 278 ASGXXXXXXXXXXXXXAMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVI 457 A G AMLKLGMK ITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVI Sbjct: 49 AGGRSKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVI 108 Query: 458 FGEAKIEDXXXXXXXXXXEQFKAPDLSSVISNPEASTAA------QEDDEDCDETGVEPK 619 FGEAKIED EQFKAP+LS+VIS E S+AA +DDE+ DE GVEPK Sbjct: 109 FGEAKIEDLSSQLQSQAAEQFKAPNLSNVISQGETSSAATAAAVQDDDDEEVDEEGVEPK 168 Query: 620 DIELV 634 DIELV Sbjct: 169 DIELV 173
>NACA4_ARATH (Q9SZY1) Nascent polypeptide-associated complex alpha subunit-like| protein 4 (NAC-alpha-like protein 4) (Alpha-NAC-like protein 4) Length = 212 Score = 135 bits (339), Expect = 1e-31 Identities = 69/108 (63%), Positives = 83/108 (76%), Gaps = 5/108 (4%) Frame = +2 Query: 326 AMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXX 505 AMLKLGMK +T VSRVT+K+SKN+LFVISKPDVFKSP S+TYVIFGEAKI+D Sbjct: 74 AMLKLGMKPVTDVSRVTIKRSKNVLFVISKPDVFKSPNSETYVIFGEAKIDDMSSQLQAQ 133 Query: 506 XXEQFKAPDLSSVISNPEASTAA-----QEDDEDCDETGVEPKDIELV 634 ++FK PD++S+I N + S AA +EDDED DETGVE KDI+LV Sbjct: 134 AAQRFKMPDVASMIPNTDGSEAATVAQEEEDDEDVDETGVEAKDIDLV 181
>NACA2_ARATH (Q94JX9) Nascent polypeptide-associated complex alpha subunit-like| protein 2 (NAC-alpha-like protein 2) (Alpha-NAC-like protein 2) Length = 217 Score = 129 bits (323), Expect = 1e-29 Identities = 66/123 (53%), Positives = 82/123 (66%), Gaps = 5/123 (4%) Frame = +2 Query: 281 SGXXXXXXXXXXXXXAMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIF 460 SG AMLKLGMK +TGVSRVT+K++KN+LF ISKPDVFKSP S+TYVIF Sbjct: 64 SGSSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNVLFFISKPDVFKSPHSETYVIF 123 Query: 461 GEAKIEDXXXXXXXXXXEQFKAPDLSSVISNPEASTA-----AQEDDEDCDETGVEPKDI 625 GEAKIED +QF+ P++ + EASTA +ED+E+ DETGVE +DI Sbjct: 124 GEAKIEDLSSQLQTQAAQQFRMPEIGATSQRAEASTATVEAQVEEDEEEIDETGVEARDI 183 Query: 626 ELV 634 +LV Sbjct: 184 DLV 186
>NACA_DROME (Q94518) Nascent polypeptide-associated complex alpha subunit| (NAC-alpha) (Alpha-NAC) Length = 217 Score = 121 bits (304), Expect = 2e-27 Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 4/106 (3%) Frame = +2 Query: 329 MLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXXX 508 MLKLG+K I GV+RVT++KSKNILFVI+ PDV+K+P SDTY++FGEAKIED Sbjct: 80 MLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQQAQVAA 139 Query: 509 XEQFKAPDLSSVISNPEASTA----AQEDDEDCDETGVEPKDIELV 634 E+FKAP+ + + A+T+ A+ED+ED D+TGV+ KDIELV Sbjct: 140 AEKFKAPEAAGAADSVGATTSVAPIAEEDEEDVDDTGVDEKDIELV 185
>NACA_ORENI (Q8AWF2) Nascent polypeptide-associated complex alpha subunit| (NAC-alpha) (Alpha-NAC) Length = 215 Score = 121 bits (304), Expect = 2e-27 Identities = 62/106 (58%), Positives = 80/106 (75%), Gaps = 3/106 (2%) Frame = +2 Query: 326 AMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXX 505 AM KLG++ +TGV+RVT++KSKNILFVI+KPDV+KSPASDTY++FGEAKIED Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLA 138 Query: 506 XXEQFKAP--DLSSVISNPEASTAAQE-DDEDCDETGVEPKDIELV 634 E+FK P +S+V N + T +E ++E+ DETGVE KDIELV Sbjct: 139 AAEKFKVPGETVSNVQENTQTPTVQEESEEEEVDETGVEVKDIELV 184
>NACA5_ARATH (Q8LGC6) Nascent polypeptide-associated complex alpha subunit-like| protein 5 (NAC-alpha-like protein 5) (Alpha-NAC-like protein 5) Length = 209 Score = 118 bits (296), Expect = 1e-26 Identities = 57/108 (52%), Positives = 81/108 (75%), Gaps = 5/108 (4%) Frame = +2 Query: 326 AMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXX 505 A+LKLGMK ++ VSRVT+K++KN+LFVISKPDV+KSP ++TYVIFGEAK++D Sbjct: 71 AVLKLGMKPVSDVSRVTIKRAKNVLFVISKPDVYKSPNAETYVIFGEAKVDDLSSQLQTQ 130 Query: 506 XXEQFKAPDLSSVISN-----PEASTAAQEDDEDCDETGVEPKDIELV 634 ++FK PD++S++ N A A +ED++D D+TGVE +DI+LV Sbjct: 131 AAQRFKMPDVTSMLPNAGSEATMAPLAEEEDEDDVDDTGVEARDIDLV 178
>NACA_XENTR (Q68F90) Nascent polypeptide-associated complex alpha subunit| (NAC-alpha) (Alpha-NAC) Length = 214 Score = 118 bits (295), Expect = 2e-26 Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 3/106 (2%) Frame = +2 Query: 326 AMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXX 505 AM KLG++ +TGV+RVT++KSKNILFVI+KPDV+KSPASDTY++FGEAKIED Sbjct: 78 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLA 137 Query: 506 XXEQFKAPD--LSSVISNPEASTAAQE-DDEDCDETGVEPKDIELV 634 E+FK +S++ N + T +E ++E+ DETGVE KDIELV Sbjct: 138 AAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELV 183
>NACAM_MOUSE (P70670) Nascent polypeptide-associated complex alpha subunit,| muscle-specific form (Alpha-NAC, muscle-specific form) Length = 2187 Score = 118 bits (295), Expect = 2e-26 Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 3/106 (2%) Frame = +2 Query: 326 AMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXX 505 AM KLG++ +TGV+RVT++KSKNILFVI+KPDV+KSPASDTY++FGEAKIED Sbjct: 2051 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLA 2110 Query: 506 XXEQFKAPD--LSSVISNPEASTAAQE-DDEDCDETGVEPKDIELV 634 E+FK +S++ N + T +E ++E+ DETGVE KDIELV Sbjct: 2111 AAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELV 2156
>NACA_MOUSE (Q60817) Nascent polypeptide-associated complex alpha subunit| (Alpha-NAC) (Alpha-NAC/1.9.2) Length = 215 Score = 118 bits (295), Expect = 2e-26 Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 3/106 (2%) Frame = +2 Query: 326 AMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXX 505 AM KLG++ +TGV+RVT++KSKNILFVI+KPDV+KSPASDTY++FGEAKIED Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLA 138 Query: 506 XXEQFKAPD--LSSVISNPEASTAAQE-DDEDCDETGVEPKDIELV 634 E+FK +S++ N + T +E ++E+ DETGVE KDIELV Sbjct: 139 AAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELV 184
>NACA_HUMAN (Q13765) Nascent polypeptide-associated complex alpha subunit| (NAC-alpha) (Alpha-NAC) (Hom s 2.02) Length = 215 Score = 118 bits (295), Expect = 2e-26 Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 3/106 (2%) Frame = +2 Query: 326 AMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXX 505 AM KLG++ +TGV+RVT++KSKNILFVI+KPDV+KSPASDTY++FGEAKIED Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLA 138 Query: 506 XXEQFKAPD--LSSVISNPEASTAAQE-DDEDCDETGVEPKDIELV 634 E+FK +S++ N + T +E ++E+ DETGVE KDIELV Sbjct: 139 AAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELV 184
>NACA_BOVIN (Q5E9A1) Nascent polypeptide-associated complex alpha subunit| (NAC-alpha) (Alpha-NAC) Length = 215 Score = 118 bits (295), Expect = 2e-26 Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 3/106 (2%) Frame = +2 Query: 326 AMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXX 505 AM KLG++ +TGV+RVT++KSKNILFVI+KPDV+KSPASDTY++FGEAKIED Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLA 138 Query: 506 XXEQFKAPD--LSSVISNPEASTAAQE-DDEDCDETGVEPKDIELV 634 E+FK +S++ N + T +E ++E+ DETGVE KDIELV Sbjct: 139 AAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELV 184
>NACA_BRARE (Q8JIU7) Nascent polypeptide-associated complex alpha subunit| (NAC-alpha) (Alpha-NAC) Length = 215 Score = 116 bits (290), Expect = 6e-26 Identities = 59/106 (55%), Positives = 78/106 (73%), Gaps = 3/106 (2%) Frame = +2 Query: 326 AMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXX 505 AM KLG++ + GV+RVT++KSKNILFVI+KPDV+KSPASDTY++FGEAKIED Sbjct: 79 AMSKLGLRQVAGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLA 138 Query: 506 XXEQFKAPD--LSSVISNPEASTAAQE-DDEDCDETGVEPKDIELV 634 E+FK +S++ N + T +E ++E+ DETGVE KDIELV Sbjct: 139 AAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELV 184
>NACA_XENLA (Q6IP73) Nascent polypeptide-associated complex alpha subunit| (NAC-alpha) (Alpha-NAC) Length = 213 Score = 116 bits (290), Expect = 6e-26 Identities = 59/106 (55%), Positives = 78/106 (73%), Gaps = 3/106 (2%) Frame = +2 Query: 326 AMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXX 505 AM KLG++ +TGV+RVT++KSKNILFVI+KPDV+KSPASDTY++FGEAKIED Sbjct: 77 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLA 136 Query: 506 XXEQFK--APDLSSVISNPEASTAAQE-DDEDCDETGVEPKDIELV 634 E+FK +S++ N + T +E ++E+ DE GVE KDIELV Sbjct: 137 AAEKFKVQGETVSNIQENTQTPTVQEESEEEEVDEAGVEVKDIELV 182
>NACA_CHILA (Q6QN10) Nascent polypeptide-associated complex alpha subunit| (NAC-alpha) (Alpha-NAC) Length = 215 Score = 115 bits (289), Expect = 8e-26 Identities = 59/106 (55%), Positives = 78/106 (73%), Gaps = 3/106 (2%) Frame = +2 Query: 326 AMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXX 505 AM KLG++ +TGV+RVT++KSKNILFVI+KPDV+KSPASDTY++FGEAKIED Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLA 138 Query: 506 XXEQFKAPD--LSSVISNPEASTAAQE-DDEDCDETGVEPKDIELV 634 E+FK +S++ N + T +E ++E+ DETGVE KDIE V Sbjct: 139 AAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIEWV 184
>NACA_PONPY (Q5R9I9) Nascent polypeptide-associated complex alpha subunit| (NAC-alpha) (Alpha-NAC) Length = 215 Score = 115 bits (288), Expect = 1e-25 Identities = 59/106 (55%), Positives = 78/106 (73%), Gaps = 3/106 (2%) Frame = +2 Query: 326 AMLKLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXX 505 AM KLG++ +TGV+RVT++KSKNILFVI+KPDV+KSPASDTY++FGEAKIED Sbjct: 79 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLA 138 Query: 506 XXEQFKAPD--LSSVISNPEASTAAQE-DDEDCDETGVEPKDIELV 634 E+FK +S++ N + T +E ++E+ DET VE KDIELV Sbjct: 139 AAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETDVEVKDIELV 184
>NACA_CAEBR (Q61UX1) Nascent polypeptide-associated complex alpha subunit| (NAC-alpha) (Alpha-NAC) Length = 197 Score = 107 bits (268), Expect = 2e-23 Identities = 57/102 (55%), Positives = 69/102 (67%), Gaps = 2/102 (1%) Frame = +2 Query: 335 KLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXXXXE 514 KLG+K +TGVSRV ++KSKNILFVI+KPDVFKSP SDTY+IFGEAKIED E Sbjct: 70 KLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHAQMSAIE 129 Query: 515 QFKAPDLSSVISNPEASTAAQEDDEDCDE--TGVEPKDIELV 634 K P+ T ++D+ED +E TG+E KDIELV Sbjct: 130 NMK-----PTREAPQLKTVEEDDNEDVEEDSTGIEEKDIELV 166
>NACA_CAEEL (Q86S66) Nascent polypeptide-associated complex alpha subunit| (NAC-alpha) (Alpha-NAC) Length = 197 Score = 105 bits (261), Expect = 1e-22 Identities = 56/104 (53%), Positives = 69/104 (66%), Gaps = 4/104 (3%) Frame = +2 Query: 335 KLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXXXXE 514 KLG+K +TGVSRV ++KSKNILFVI+KPDVFKSP SDTY+IFGEAKIED E Sbjct: 68 KLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHAQMSAIE 127 Query: 515 QFKAPDLSSVISNPEASTAAQEDDEDC----DETGVEPKDIELV 634 +L P+ T ++++ED D TG+E KDIELV Sbjct: 128 -----NLKPTREAPQLKTVEEDENEDVEFKEDSTGIEEKDIELV 166
>NACA_BABDI (Q45FF9) Nascent polypeptide-associated complex alpha subunit| (NAC-alpha) (Alpha-NAC) Length = 197 Score = 79.0 bits (193), Expect = 1e-14 Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 21/121 (17%) Frame = +2 Query: 335 KLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXXXXE 514 KLGMK + GV++V +KKSK I FV++KPDV+K P SDTYVIFGEAK+ED + Sbjct: 48 KLGMKPVDGVTKVCIKKSKQIYFVVNKPDVYKLPNSDTYVIFGEAKVEDMSQNSALEAAQ 107 Query: 515 QFKAPDLSSVIS------NPEASTAAQEDDED---------------CDETGVEPKDIEL 631 + LSS + ++S AA D DE+ V DI+L Sbjct: 108 RLS--QLSSALQAVGADRGTDSSAAAHASGHDHAHDHDHSHGDCASKADESSVNQSDIDL 165 Query: 632 V 634 V Sbjct: 166 V 166
>NACA_SCHPO (P87147) Putative nascent polypeptide-associated complex alpha| subunit-like protein (NAC-alpha-like protein) (Alpha-NAC-like protein) Length = 173 Score = 67.8 bits (164), Expect = 3e-11 Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 11/111 (9%) Frame = +2 Query: 335 KLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXXXXE 514 KLG+K + G++RV +++ KNIL +I++P V+KS +++ Y++ G+ +ED Sbjct: 33 KLGLKRVEGITRVAMRRPKNILLIINEPIVYKS-SNNAYIVLGKVTVEDMAAQARAFNES 91 Query: 515 QFKAPDLSSVISNPEASTAAQ-----------EDDEDCDETGVEPKDIELV 634 Q +A + + E S AQ E ++ DETGV+ KDIELV Sbjct: 92 QKQATETKEEAAITEESGDAQPADTAKIEESFEQEKAVDETGVDAKDIELV 142
>NACA_YEAST (P38879) Nascent polypeptide-associated complex alpha subunit EGD2| (NAC-alpha) (Alpha-NAC) (GAL4 DNA-binding enhancer protein 2) Length = 173 Score = 58.2 bits (139), Expect = 2e-08 Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 20/120 (16%) Frame = +2 Query: 335 KLGMKTITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDXXXXXXXXXXE 514 KLG+K I G+ RVT +K N ++ I KP+VF+S A YV+FGEAK+ D + Sbjct: 25 KLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRS-AGGNYVVFGEAKV-DNFTQKLAAAQQ 82 Query: 515 QFKAPDL-----SSVISNPE-------------ASTAAQEDDE--DCDETGVEPKDIELV 634 Q +A + +PE + AA+EDDE + D + DIELV Sbjct: 83 QAQASGIMPSNEDVATKSPEDIQADMQAAAEGSVNAAAEEDDEEGEVDAGDLNKDDIELV 142
>FA8_CANFA (O18806) Coagulation factor VIII precursor (Procoagulant component)| Length = 2343 Score = 30.0 bits (66), Expect = 6.0 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 3/68 (4%) Frame = +3 Query: 438 HPTHMSFLGRLRLRILA---HSCSHRLRSNSRRLILAASSQTPXXXXXXXXXXXIVTRLE 608 HPTH S LR+ +L +SCS L S+ + A + + RL Sbjct: 2163 HPTHYSIRSTLRMELLGCDFNSCSMPLGMESKAISDAQITASSYLSSMLATWSPSQARLH 2222 Query: 609 LSRRTLSW 632 L RT +W Sbjct: 2223 LQGRTNAW 2230 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,081,028 Number of Sequences: 219361 Number of extensions: 795675 Number of successful extensions: 2591 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 2518 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2570 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
