| Clone Name | bags23f03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191978.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1986 Score = 311 bits (157), Expect = 1e-81 Identities = 499/613 (81%) Strand = Plus / Plus Query: 11 cacagccccctgtcgcgcaacagcagcactacagtgttcagcaagtcccgccacagatgg 70 ||||||||| ||| | ||||| |||||| |||| | |||||||||| || |||||| | | Sbjct: 1289 cacagccccttgtggtgcaaccgcagcaatacaatattcagcaagttccaccacagctag 1348 Query: 71 ttcaacagaaaacatcttcgcctcattctcagagtactcctcaagtcacgctcatgtatc 130 |||||||| ||||||| || ||||| |||| ||| ||||||||||| | || |||||| Sbjct: 1349 ttcaacagcaaacatcatctcctcaggctcaaagtgctcctcaagtcgctgtcttgtatc 1408 Query: 131 ctccatactcctctcagaagcctgccaatgctaccactgagccacttccgagaagtttgg 190 |||||||||| |||||||||||||||| |||||| || |||||||||| ||||| ||| Sbjct: 1409 ctccatactcttctcagaagcctgccagtgctacaacggagccacttctgagaaacatgg 1468 Query: 191 tagggcagtctccatactcttcacatcagcagaagcatcatgaagtcatgccttcgtttt 250 | | ||| || ||||||||||||| |||||||||||||||||||| ||||||||| |||| Sbjct: 1469 ttgtgcactcgccatactcttcacctcagcagaagcatcatgaagccatgccttcttttt 1528 Query: 251 atggccaaggaaacacaaatttgcttcccacagcagagcataatatccagcatcaacagc 310 |||||||||| || ||| ||||||||| | |||| | ||| ||||||||||| |||| Sbjct: 1529 atggccaaggcaatacagttttgcttccatcgacagaccttaacatccagcatcagcagc 1588 Query: 311 cacagcaactgcaaacacagagccaggcctcatgcccacctcaaccaagcaagccaagcc 370 |||| | | |||| ||| ||| | ||||||||||||||||||||||||||| | || Sbjct: 1589 cacaaccattgcagcaacacggcctgagctcatgcccacctcaaccaagcaagcccaacc 1648 Query: 371 actgcagcattgcgtcgtatgctgttcagggtagtggccgagcctacacaaccacatata 430 |||| || | || || ||||| ||||| |||||||||| | |||||| |||||| | Sbjct: 1649 actgtagtgtggcatcctatgccgttcaaggtagtggccaatcctacagcgccacattca 1708 Query: 431 agaatcctgccgagtgccctgcaactgttgttgctgttctgcctcagcattcggcagcag 490 |||||||| | | || |||| ||||||||||||||||||||||||||| | || | Sbjct: 1709 agaatccttctaactgtgctgctactgttgttgctgttctgcctcagcatccagcgagtg 1768 Query: 491 ctcctatggcgttccatcatttgggaccccaagtcctgcataagaatccatatggaagta 550 ||| ||||| || |||||||||||||| |||||| ||||||| | |||| ||||| || Sbjct: 1769 gtccgatggcatttcatcatttgggaccacaagtcgtgcataatcagccatttggaaata 1828 Query: 551 tgttcgaaacggccagtgtagtagggtatccaaaggatctagttgggagtatggcgctcc 610 |||| ||||| || ||||| |||||||||||| ||||| ||||| ||| | || |||| Sbjct: 1829 tgtttgaaacagctagtgtggtagggtatccacgggatcgagttgagagcgtagctctcc 1888 Query: 611 cagtggtgactgc 623 ||||||| ||||| Sbjct: 1889 cagtggtaactgc 1901
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 311 bits (157), Expect = 1e-81 Identities = 499/613 (81%) Strand = Plus / Minus Query: 11 cacagccccctgtcgcgcaacagcagcactacagtgttcagcaagtcccgccacagatgg 70 ||||||||| ||| | ||||| |||||| |||| | |||||||||| || |||||| | | Sbjct: 27625285 cacagccccttgtggtgcaaccgcagcaatacaatattcagcaagttccaccacagctag 27625226 Query: 71 ttcaacagaaaacatcttcgcctcattctcagagtactcctcaagtcacgctcatgtatc 130 |||||||| ||||||| || ||||| |||| ||| ||||||||||| | || |||||| Sbjct: 27625225 ttcaacagcaaacatcatctcctcaggctcaaagtgctcctcaagtcgctgtcttgtatc 27625166 Query: 131 ctccatactcctctcagaagcctgccaatgctaccactgagccacttccgagaagtttgg 190 |||||||||| |||||||||||||||| |||||| || |||||||||| ||||| ||| Sbjct: 27625165 ctccatactcttctcagaagcctgccagtgctacaacggagccacttctgagaaacatgg 27625106 Query: 191 tagggcagtctccatactcttcacatcagcagaagcatcatgaagtcatgccttcgtttt 250 | | ||| || ||||||||||||| |||||||||||||||||||| ||||||||| |||| Sbjct: 27625105 ttgtgcactcgccatactcttcacctcagcagaagcatcatgaagccatgccttcttttt 27625046 Query: 251 atggccaaggaaacacaaatttgcttcccacagcagagcataatatccagcatcaacagc 310 |||||||||| || ||| ||||||||| | |||| | ||| ||||||||||| |||| Sbjct: 27625045 atggccaaggcaatacagttttgcttccatcgacagaccttaacatccagcatcagcagc 27624986 Query: 311 cacagcaactgcaaacacagagccaggcctcatgcccacctcaaccaagcaagccaagcc 370 |||| | | |||| ||| ||| | ||||||||||||||||||||||||||| | || Sbjct: 27624985 cacaaccattgcagcaacacggcctgagctcatgcccacctcaaccaagcaagcccaacc 27624926 Query: 371 actgcagcattgcgtcgtatgctgttcagggtagtggccgagcctacacaaccacatata 430 |||| || | || || ||||| ||||| |||||||||| | |||||| |||||| | Sbjct: 27624925 actgtagtgtggcatcctatgccgttcaaggtagtggccaatcctacagcgccacattca 27624866 Query: 431 agaatcctgccgagtgccctgcaactgttgttgctgttctgcctcagcattcggcagcag 490 |||||||| | | || |||| ||||||||||||||||||||||||||| | || | Sbjct: 27624865 agaatccttctaactgtgctgctactgttgttgctgttctgcctcagcatccagcgagtg 27624806 Query: 491 ctcctatggcgttccatcatttgggaccccaagtcctgcataagaatccatatggaagta 550 ||| ||||| || |||||||||||||| |||||| ||||||| | |||| ||||| || Sbjct: 27624805 gtccgatggcatttcatcatttgggaccacaagtcgtgcataatcagccatttggaaata 27624746 Query: 551 tgttcgaaacggccagtgtagtagggtatccaaaggatctagttgggagtatggcgctcc 610 |||| ||||| || ||||| |||||||||||| ||||| ||||| ||| | || |||| Sbjct: 27624745 tgtttgaaacagctagtgtggtagggtatccacgggatcgagttgagagcgtagctctcc 27624686 Query: 611 cagtggtgactgc 623 ||||||| ||||| Sbjct: 27624685 cagtggtaactgc 27624673
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 311 bits (157), Expect = 1e-81 Identities = 499/613 (81%) Strand = Plus / Minus Query: 11 cacagccccctgtcgcgcaacagcagcactacagtgttcagcaagtcccgccacagatgg 70 ||||||||| ||| | ||||| |||||| |||| | |||||||||| || |||||| | | Sbjct: 33851 cacagccccttgtggtgcaaccgcagcaatacaatattcagcaagttccaccacagctag 33792 Query: 71 ttcaacagaaaacatcttcgcctcattctcagagtactcctcaagtcacgctcatgtatc 130 |||||||| ||||||| || ||||| |||| ||| ||||||||||| | || |||||| Sbjct: 33791 ttcaacagcaaacatcatctcctcaggctcaaagtgctcctcaagtcgctgtcttgtatc 33732 Query: 131 ctccatactcctctcagaagcctgccaatgctaccactgagccacttccgagaagtttgg 190 |||||||||| |||||||||||||||| |||||| || |||||||||| ||||| ||| Sbjct: 33731 ctccatactcttctcagaagcctgccagtgctacaacggagccacttctgagaaacatgg 33672 Query: 191 tagggcagtctccatactcttcacatcagcagaagcatcatgaagtcatgccttcgtttt 250 | | ||| || ||||||||||||| |||||||||||||||||||| ||||||||| |||| Sbjct: 33671 ttgtgcactcgccatactcttcacctcagcagaagcatcatgaagccatgccttcttttt 33612 Query: 251 atggccaaggaaacacaaatttgcttcccacagcagagcataatatccagcatcaacagc 310 |||||||||| || ||| ||||||||| | |||| | ||| ||||||||||| |||| Sbjct: 33611 atggccaaggcaatacagttttgcttccatcgacagaccttaacatccagcatcagcagc 33552 Query: 311 cacagcaactgcaaacacagagccaggcctcatgcccacctcaaccaagcaagccaagcc 370 |||| | | |||| ||| ||| | ||||||||||||||||||||||||||| | || Sbjct: 33551 cacaaccattgcagcaacacggcctgagctcatgcccacctcaaccaagcaagcccaacc 33492 Query: 371 actgcagcattgcgtcgtatgctgttcagggtagtggccgagcctacacaaccacatata 430 |||| || | || || ||||| ||||| |||||||||| | |||||| |||||| | Sbjct: 33491 actgtagtgtggcatcctatgccgttcaaggtagtggccaatcctacagcgccacattca 33432 Query: 431 agaatcctgccgagtgccctgcaactgttgttgctgttctgcctcagcattcggcagcag 490 |||||||| | | || |||| ||||||||||||||||||||||||||| | || | Sbjct: 33431 agaatccttctaactgtgctgctactgttgttgctgttctgcctcagcatccagcgagtg 33372 Query: 491 ctcctatggcgttccatcatttgggaccccaagtcctgcataagaatccatatggaagta 550 ||| ||||| || |||||||||||||| |||||| ||||||| | |||| ||||| || Sbjct: 33371 gtccgatggcatttcatcatttgggaccacaagtcgtgcataatcagccatttggaaata 33312 Query: 551 tgttcgaaacggccagtgtagtagggtatccaaaggatctagttgggagtatggcgctcc 610 |||| ||||| || ||||| |||||||||||| ||||| ||||| ||| | || |||| Sbjct: 33311 tgtttgaaacagctagtgtggtagggtatccacgggatcgagttgagagcgtagctctcc 33252 Query: 611 cagtggtgactgc 623 ||||||| ||||| Sbjct: 33251 cagtggtaactgc 33239
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0007F06 Length = 150817 Score = 311 bits (157), Expect = 1e-81 Identities = 499/613 (81%) Strand = Plus / Minus Query: 11 cacagccccctgtcgcgcaacagcagcactacagtgttcagcaagtcccgccacagatgg 70 ||||||||| ||| | ||||| |||||| |||| | |||||||||| || |||||| | | Sbjct: 92579 cacagccccttgtggtgcaaccgcagcaatacaatattcagcaagttccaccacagctag 92520 Query: 71 ttcaacagaaaacatcttcgcctcattctcagagtactcctcaagtcacgctcatgtatc 130 |||||||| ||||||| || ||||| |||| ||| ||||||||||| | || |||||| Sbjct: 92519 ttcaacagcaaacatcatctcctcaggctcaaagtgctcctcaagtcgctgtcttgtatc 92460 Query: 131 ctccatactcctctcagaagcctgccaatgctaccactgagccacttccgagaagtttgg 190 |||||||||| |||||||||||||||| |||||| || |||||||||| ||||| ||| Sbjct: 92459 ctccatactcttctcagaagcctgccagtgctacaacggagccacttctgagaaacatgg 92400 Query: 191 tagggcagtctccatactcttcacatcagcagaagcatcatgaagtcatgccttcgtttt 250 | | ||| || ||||||||||||| |||||||||||||||||||| ||||||||| |||| Sbjct: 92399 ttgtgcactcgccatactcttcacctcagcagaagcatcatgaagccatgccttcttttt 92340 Query: 251 atggccaaggaaacacaaatttgcttcccacagcagagcataatatccagcatcaacagc 310 |||||||||| || ||| ||||||||| | |||| | ||| ||||||||||| |||| Sbjct: 92339 atggccaaggcaatacagttttgcttccatcgacagaccttaacatccagcatcagcagc 92280 Query: 311 cacagcaactgcaaacacagagccaggcctcatgcccacctcaaccaagcaagccaagcc 370 |||| | | |||| ||| ||| | ||||||||||||||||||||||||||| | || Sbjct: 92279 cacaaccattgcagcaacacggcctgagctcatgcccacctcaaccaagcaagcccaacc 92220 Query: 371 actgcagcattgcgtcgtatgctgttcagggtagtggccgagcctacacaaccacatata 430 |||| || | || || ||||| ||||| |||||||||| | |||||| |||||| | Sbjct: 92219 actgtagtgtggcatcctatgccgttcaaggtagtggccaatcctacagcgccacattca 92160 Query: 431 agaatcctgccgagtgccctgcaactgttgttgctgttctgcctcagcattcggcagcag 490 |||||||| | | || |||| ||||||||||||||||||||||||||| | || | Sbjct: 92159 agaatccttctaactgtgctgctactgttgttgctgttctgcctcagcatccagcgagtg 92100 Query: 491 ctcctatggcgttccatcatttgggaccccaagtcctgcataagaatccatatggaagta 550 ||| ||||| || |||||||||||||| |||||| ||||||| | |||| ||||| || Sbjct: 92099 gtccgatggcatttcatcatttgggaccacaagtcgtgcataatcagccatttggaaata 92040 Query: 551 tgttcgaaacggccagtgtagtagggtatccaaaggatctagttgggagtatggcgctcc 610 |||| ||||| || ||||| |||||||||||| ||||| ||||| ||| | || |||| Sbjct: 92039 tgtttgaaacagctagtgtggtagggtatccacgggatcgagttgagagcgtagctctcc 91980 Query: 611 cagtggtgactgc 623 ||||||| ||||| Sbjct: 91979 cagtggtaactgc 91967
>dbj|AK101605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051L23, full insert sequence Length = 1675 Score = 311 bits (157), Expect = 1e-81 Identities = 499/613 (81%) Strand = Plus / Plus Query: 11 cacagccccctgtcgcgcaacagcagcactacagtgttcagcaagtcccgccacagatgg 70 ||||||||| ||| | ||||| |||||| |||| | |||||||||| || |||||| | | Sbjct: 671 cacagccccttgtggtgcaaccgcagcaatacaatattcagcaagttccaccacagctag 730 Query: 71 ttcaacagaaaacatcttcgcctcattctcagagtactcctcaagtcacgctcatgtatc 130 |||||||| ||||||| || ||||| |||| ||| ||||||||||| | || |||||| Sbjct: 731 ttcaacagcaaacatcatctcctcaggctcaaagtgctcctcaagtcgctgtcttgtatc 790 Query: 131 ctccatactcctctcagaagcctgccaatgctaccactgagccacttccgagaagtttgg 190 |||||||||| |||||||||||||||| |||||| || |||||||||| ||||| ||| Sbjct: 791 ctccatactcttctcagaagcctgccagtgctacaacggagccacttctgagaaacatgg 850 Query: 191 tagggcagtctccatactcttcacatcagcagaagcatcatgaagtcatgccttcgtttt 250 | | ||| || ||||||||||||| |||||||||||||||||||| ||||||||| |||| Sbjct: 851 ttgtgcactcgccatactcttcacctcagcagaagcatcatgaagccatgccttcttttt 910 Query: 251 atggccaaggaaacacaaatttgcttcccacagcagagcataatatccagcatcaacagc 310 |||||||||| || ||| ||||||||| | |||| | ||| ||||||||||| |||| Sbjct: 911 atggccaaggcaatacagttttgcttccatcgacagaccttaacatccagcatcagcagc 970 Query: 311 cacagcaactgcaaacacagagccaggcctcatgcccacctcaaccaagcaagccaagcc 370 |||| | | |||| ||| ||| | ||||||||||||||||||||||||||| | || Sbjct: 971 cacaaccattgcagcaacacggcctgagctcatgcccacctcaaccaagcaagcccaacc 1030 Query: 371 actgcagcattgcgtcgtatgctgttcagggtagtggccgagcctacacaaccacatata 430 |||| || | || || ||||| ||||| |||||||||| | |||||| |||||| | Sbjct: 1031 actgtagtgtggcatcctatgccgttcaaggtagtggccaatcctacagcgccacattca 1090 Query: 431 agaatcctgccgagtgccctgcaactgttgttgctgttctgcctcagcattcggcagcag 490 |||||||| | | || |||| ||||||||||||||||||||||||||| | || | Sbjct: 1091 agaatccttctaactgtgctgctactgttgttgctgttctgcctcagcatccagcgagtg 1150 Query: 491 ctcctatggcgttccatcatttgggaccccaagtcctgcataagaatccatatggaagta 550 ||| ||||| || |||||||||||||| |||||| ||||||| | |||| ||||| || Sbjct: 1151 gtccgatggcatttcatcatttgggaccacaagtcgtgcataatcagccatttggaaata 1210 Query: 551 tgttcgaaacggccagtgtagtagggtatccaaaggatctagttgggagtatggcgctcc 610 |||| ||||| || ||||| |||||||||||| ||||| ||||| ||| | || |||| Sbjct: 1211 tgtttgaaacagctagtgtggtagggtatccacgggatcgagttgagagcgtagctctcc 1270 Query: 611 cagtggtgactgc 623 ||||||| ||||| Sbjct: 1271 cagtggtaactgc 1283
>ref|XM_823136.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.47.0011) partial mRNA Length = 8997 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 480 ttcggcagcagctcctatggcgt 502 ||||||||||||||||||||||| Sbjct: 1483 ttcggcagcagctcctatggcgt 1505
>emb|CR450696.6| Zebrafish DNA sequence from clone CH211-147K9 in linkage group 25, complete sequence Length = 187055 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 caatgctaccactgagccactt 177 |||||||||||||||||||||| Sbjct: 104493 caatgctaccactgagccactt 104514
>gb|AC160830.2| Xenopus tropicalis clone ISB1-43L3, complete sequence Length = 69623 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 gctcatgtatcctccatactcctctc 145 |||||||||||| ||||||||||||| Sbjct: 4660 gctcatgtatcccccatactcctctc 4685
>ref|XM_633151.1| Dictyostelium discoideum hypothetical protein (DDB0186445), partial mRNA Length = 1767 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 gcatcaacagccacagcaact 320 ||||||||||||||||||||| Sbjct: 697 gcatcaacagccacagcaact 717
>ref|XM_513645.1| PREDICTED: Pan troglodytes chitinase 3-like 2 (LOC457115), mRNA Length = 1497 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1355 gtctccatactcttcacatca 1335
>gb|BC073659.1| Xenopus laevis MGC83004 protein, mRNA (cDNA clone MGC:83004 IMAGE:5536693), complete cds Length = 3951 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 cctgcaactgttgttgctgtt 468 ||||||||||||||||||||| Sbjct: 2060 cctgcaactgttgttgctgtt 2040
>ref|NM_001025199.1| Homo sapiens chitinase 3-like 2 (CHI3L2), transcript variant 3, mRNA Length = 1516 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1132 gtctccatactcttcacatca 1112
>ref|NM_004000.2| Homo sapiens chitinase 3-like 2 (CHI3L2), transcript variant 1, mRNA Length = 1486 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1102 gtctccatactcttcacatca 1082
>ref|NM_001025197.1| Homo sapiens chitinase 3-like 2 (CHI3L2), transcript variant 2, mRNA Length = 1456 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1072 gtctccatactcttcacatca 1052
>emb|AL513202.22| Human DNA sequence from clone RP11-165H20 on chromosome 1 Contains the 3' end of a novel transcript (DKFZp313J1722), the CHI3L2 gene for chitinase 3-like 2 protein, an unprocessed pseudogene, a gene for a novel protein containing a Glycosyl hydrolases family 18 domain and the gene for eosinophil chemotactic cytokine (CHIA), complete sequence Length = 93740 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 21790 gtctccatactcttcacatca 21770
>gb|AC100803.11| Homo sapiens chromosome 8, clone CTD-3064M3, complete sequence Length = 152418 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 gccaggcctcatgcccacctc 352 ||||||||||||||||||||| Sbjct: 60517 gccaggcctcatgcccacctc 60537
>gb|BT007723.1| Synthetic construct Homo sapiens chitinase 3-like 2 mRNA, partial cds Length = 1173 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1031 gtctccatactcttcacatca 1011
>gb|BT006767.1| Homo sapiens chitinase 3-like 2 mRNA, complete cds Length = 1173 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1031 gtctccatactcttcacatca 1011
>gb|BC011460.1| Homo sapiens chitinase 3-like 2, transcript variant 1, mRNA (cDNA clone MGC:17183 IMAGE:4214121), complete cds Length = 1449 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1040 gtctccatactcttcacatca 1020
>emb|CR626113.1| full-length cDNA clone CS0DI033YH05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1392 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1035 gtctccatactcttcacatca 1015
>emb|CR625467.1| full-length cDNA clone CS0CAP002YN15 of Thymus of Homo sapiens (human) Length = 1349 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1012 gtctccatactcttcacatca 992
>emb|CR623620.1| full-length cDNA clone CS0DJ007YF16 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1367 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 999 gtctccatactcttcacatca 979
>emb|CR608464.1| full-length cDNA clone CS0DH006YO05 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1455 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1090 gtctccatactcttcacatca 1070
>emb|CR603396.1| full-length cDNA clone CS0DH002YA16 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1434 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1096 gtctccatactcttcacatca 1076
>emb|CR599276.1| full-length cDNA clone CS0DH002YJ02 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1355 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1039 gtctccatactcttcacatca 1019
>emb|CR597779.1| full-length cDNA clone CS0DI069YI19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1385 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1035 gtctccatactcttcacatca 1015
>gb|AC104084.5| Homo sapiens BAC clone RP11-601I8 from 2, complete sequence Length = 109138 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 atggccaaggaaacacaaatt 271 ||||||||||||||||||||| Sbjct: 56329 atggccaaggaaacacaaatt 56309
>dbj|AK223316.1| Homo sapiens mRNA for chitinase 3-like 2 variant, clone: TMS08833 Length = 1403 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1012 gtctccatactcttcacatca 992
>gb|AY891692.1| Synthetic construct Homo sapiens clone FLH013432.01L chitinase 3-like 2 (CHI3L2) mRNA, partial cds Length = 1173 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1031 gtctccatactcttcacatca 1011
>gb|AY891691.1| Synthetic construct Homo sapiens clone FLH013431.01L chitinase 3-like 2 (CHI3L2) mRNA, partial cds Length = 1173 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1031 gtctccatactcttcacatca 1011
>gb|AY889147.1| Synthetic construct Homo sapiens clone FLH013436.01X chitinase 3-like 2 (CHI3L2) mRNA, complete cds Length = 1173 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1031 gtctccatactcttcacatca 1011
>gb|AY889146.1| Synthetic construct Homo sapiens clone FLH013435.01X chitinase 3-like 2 (CHI3L2) mRNA, complete cds Length = 1173 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1031 gtctccatactcttcacatca 1011
>dbj|AP005792.5| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1533H12, complete sequence Length = 141371 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 gccaggcctcatgcccacctc 352 ||||||||||||||||||||| Sbjct: 61239 gccaggcctcatgcccacctc 61259
>gb|U49835.1|HSU49835 Human YKL-39 precursor mRNA, complete cds Length = 1418 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1051 gtctccatactcttcacatca 1031
>gb|U58515.1|HSU58515 Human chitinase (HUMTCHIT) mRNA, exon 1b form, partial cds Length = 1500 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1133 gtctccatactcttcacatca 1113
>gb|U58514.1|HSU58514 Human chitinase precursor (HUMTCHIT) mRNA, exon 1a form, complete cds Length = 1434 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtctccatactcttcacatca 218 ||||||||||||||||||||| Sbjct: 1067 gtctccatactcttcacatca 1047
>ref|NM_001035572.1| Arabidopsis thaliana heat shock protein binding / unfolded protein binding AT3G06340 transcript variant AT3G06340.2 mRNA, complete cds Length = 2585 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ttgcttcccacagcagagca 290 |||||||||||||||||||| Sbjct: 898 ttgcttcccacagcagagca 917
>ref|NM_111509.2| Arabidopsis thaliana heat shock protein binding / unfolded protein binding AT3G06340 transcript variant AT3G06340.1 mRNA, complete cds Length = 2588 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ttgcttcccacagcagagca 290 |||||||||||||||||||| Sbjct: 901 ttgcttcccacagcagagca 920
>ref|XM_455299.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F04840g predicted mRNA Length = 1911 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 caacagccacagcaactgcaaaca 327 ||||||||||||||||| |||||| Sbjct: 1702 caacagccacagcaactccaaaca 1725
>gb|AY553965.1| Drosophila melanogaster thisbe mRNA, complete cds Length = 2459 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ctgcaactgttgttgctgtt 468 |||||||||||||||||||| Sbjct: 1106 ctgcaactgttgttgctgtt 1087
>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete sequence Length = 103960 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 413 cctacacaaccacatataagaatc 436 |||||||||||||| ||||||||| Sbjct: 528 cctacacaaccacacataagaatc 551
>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence, complete sequence Length = 94369 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 413 cctacacaaccacatataagaatc 436 |||||||||||||| ||||||||| Sbjct: 66072 cctacacaaccacacataagaatc 66095
>gb|AC011623.5|ATAC011623 Arabidopsis thaliana chromosome III BAC F24P17 genomic sequence, complete sequence Length = 86022 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ttgcttcccacagcagagca 290 |||||||||||||||||||| Sbjct: 70402 ttgcttcccacagcagagca 70421
>gb|AC018907.5|ATAC018907 Arabidopsis thaliana chromosome III BAC F28L1 genomic sequence, complete sequence Length = 93478 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ttgcttcccacagcagagca 290 |||||||||||||||||||| Sbjct: 88087 ttgcttcccacagcagagca 88068
>ref|XM_506047.1| Yarrowia lipolytica CLIB122, YALI0F30371g predicted mRNA Length = 2550 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cagcatcaacagccacagca 317 |||||||||||||||||||| Sbjct: 388 cagcatcaacagccacagca 407
>ref|XM_968841.1| PREDICTED: Tribolium castaneum similar to High mobility group protein DSP1 (Dorsal switch protein 1) (LOC662763), mRNA Length = 2682 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ctgcaactgttgttgctgtt 468 |||||||||||||||||||| Sbjct: 1983 ctgcaactgttgttgctgtt 1964
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 caacagccacagcaactgcaaaca 327 ||||||||||||||||| |||||| Sbjct: 476245 caacagccacagcaactccaaaca 476268
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ctaccactgagccacttccg 180 |||||||||||||||||||| Sbjct: 1728011 ctaccactgagccacttccg 1727992
>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174645 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 ctgcaactgttgttgctgtt 468 |||||||||||||||||||| Sbjct: 128035 ctgcaactgttgttgctgtt 128054
>gb|AC010054.7| Drosophila melanogaster 3L BAC RP98-15E10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173109 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 ctgcaactgttgttgctgtt 468 |||||||||||||||||||| Sbjct: 27609 ctgcaactgttgttgctgtt 27628
>ref|NM_136857.2| Drosophila melanogaster thisbe CG12443-RA (ths), mRNA Length = 2777 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ctgcaactgttgttgctgtt 468 |||||||||||||||||||| Sbjct: 1571 ctgcaactgttgttgctgtt 1552
>gb|AC099015.1| Drosophila melanogaster, chromosome 2R, region 48C-49A, BAC clone BACR26P21, complete sequence Length = 157010 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ctgcaactgttgttgctgtt 468 |||||||||||||||||||| Sbjct: 76731 ctgcaactgttgttgctgtt 76712
>gb|AC020904.7| Homo sapiens chromosome 19 clone CTB-52I2, complete sequence Length = 148824 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 agagccaggcctcatgccca 348 |||||||||||||||||||| Sbjct: 29280 agagccaggcctcatgccca 29261
>gb|AC027315.3|AC027315 Homo sapiens chromosome 5 clone CTC-293G12, complete sequence Length = 171390 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 tgttgttgctgttctgcctc 475 |||||||||||||||||||| Sbjct: 12821 tgttgttgctgttctgcctc 12802
>emb|BX823302.1|CNS0A4X8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2516 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ttgcttcccacagcagagca 290 |||||||||||||||||||| Sbjct: 853 ttgcttcccacagcagagca 872
>gb|AC133920.2| Homo sapiens chromosome 16 clone RP11-413O9, complete sequence Length = 197357 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 aaccaagcaagccaagccac 372 |||||||||||||||||||| Sbjct: 71691 aaccaagcaagccaagccac 71710
>gb|DQ020483.1| Sus scrofa clone BAC KNP_1044G11, complete sequence Length = 134529 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 aaaacatcttcgcctcattctcag 102 |||||||||| ||||||||||||| Sbjct: 43325 aaaacatcttagcctcattctcag 43348
>dbj|AB109772.2| Finegoldia magna rrnD operon, complete sequence Length = 8559 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ctaccactgagccacttccg 180 |||||||||||||||||||| Sbjct: 6788 ctaccactgagccacttccg 6769
>gb|AE003824.3| Drosophila melanogaster chromosome 2R, section 26 of 73 of the complete sequence Length = 268836 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ctgcaactgttgttgctgtt 468 |||||||||||||||||||| Sbjct: 83727 ctgcaactgttgttgctgtt 83708
>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the complete sequence Length = 290640 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 ctgcaactgttgttgctgtt 468 |||||||||||||||||||| Sbjct: 106503 ctgcaactgttgttgctgtt 106522
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 tccatactcttcacatcagc 220 |||||||||||||||||||| Sbjct: 645414 tccatactcttcacatcagc 645433
>gb|AC005465.1|AC005465 Drosophila melanogaster, chromosome 2R, region 48C1-48C2, P1 clone DS05372, complete sequence Length = 77862 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 ctgcaactgttgttgctgtt 468 |||||||||||||||||||| Sbjct: 46513 ctgcaactgttgttgctgtt 46532
>gb|AC139323.4| Mus musculus BAC clone RP24-383P22 from 13, complete sequence Length = 231965 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 gttccatcatttgggacccc 520 |||||||||||||||||||| Sbjct: 87183 gttccatcatttgggacccc 87202
>gb|AC139108.3| Mus musculus BAC clone RP23-93M1 from 9, complete sequence Length = 269739 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 caaacacagagccaggcctc 341 |||||||||||||||||||| Sbjct: 102565 caaacacagagccaggcctc 102584
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cagcatcaacagccacagca 317 |||||||||||||||||||| Sbjct: 3794045 cagcatcaacagccacagca 3794064
>dbj|AB012615.1| Xenopus laevis mRNA for XFGF-20, complete cds Length = 1925 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 atcctgccgagtgccctgca 453 |||||||||||||||||||| Sbjct: 775 atcctgccgagtgccctgca 756 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,546,855 Number of Sequences: 3902068 Number of extensions: 5546855 Number of successful extensions: 118989 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118716 Number of HSP's gapped (non-prelim): 263 length of query: 624 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 601 effective length of database: 17,143,297,704 effective search space: 10303121920104 effective search space used: 10303121920104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)