>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 57      gtggcggcgctggtcgcgctgatgtg 82
               |||| |||||||||||||||||||||
Sbjct: 1975235 gtggtggcgctggtcgcgctgatgtg 1975210

>emb|BX548058.9| Zebrafish DNA sequence from clone CH211-181H11 in linkage group 18,
             complete sequence
          Length = 95339

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   ttgactgttgtgttgtctttg 261
             |||||||||||||||||||||
Sbjct: 54444 ttgactgttgtgttgtctttg 54424

>gb|AC084541.1|CBRG27D19 Caenorhabditis briggsae cosmid G27D19, complete sequence
          Length = 40961

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    ggtcatggcagcagcaatgct 40
             |||||||||||||||||||||
Sbjct: 16414 ggtcatggcagcagcaatgct 16394

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 57      gtggcggcgctggtcgcgctg 77
               |||||||||||||||||||||
Sbjct: 4528294 gtggcggcgctggtcgcgctg 4528314

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 61      cggcgctggtcgcgctgatgt 81
               |||||||||||||||||||||
Sbjct: 2784343 cggcgctggtcgcgctgatgt 2784363



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 58      tggcggcgctggtcgcgctg 77
               ||||||||||||||||||||
Sbjct: 7131628 tggcggcgctggtcgcgctg 7131609

>emb|BX548060.7| Zebrafish DNA sequence from clone CH211-117I10 in linkage group 18,
            complete sequence
          Length = 120346

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 241  ttgactgttgtgttgtctttg 261
            |||||||||||||||||||||
Sbjct: 8317 ttgactgttgtgttgtctttg 8337

>ref|XM_705503.1| Candida albicans SC5314 putative spliceosomal translocase-like
           protein Snu114p (CaO19.144), mRNA
          Length = 3069

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 277 tctgcaagatgaagaagaag 296
           ||||||||||||||||||||
Sbjct: 141 tctgcaagatgaagaagaag 160

>ref|XM_705490.1| Candida albicans SC5314 putative spliceosomal translocase-like
           protein Snu114p (CaO19.7784), mRNA
          Length = 3069

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 277 tctgcaagatgaagaagaag 296
           ||||||||||||||||||||
Sbjct: 141 tctgcaagatgaagaagaag 160

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 60      gcggcgctggtcgcgctgat 79
               ||||||||||||||||||||
Sbjct: 1205292 gcggcgctggtcgcgctgat 1205273

>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 57      gtggcggcgctggtcgcgctgatg 80
               |||||||||||||||| |||||||
Sbjct: 2897605 gtggcggcgctggtcgggctgatg 2897582

>emb|AL583920.1|MLEPRTN4 Mycobacterium leprae strain TN complete genome; segment 4/10
          Length = 348450

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     ggtcatggcagcagcaatgc 39
              ||||||||||||||||||||
Sbjct: 340317 ggtcatggcagcagcaatgc 340298

>gb|AE012056.1| Xanthomonas axonopodis pv. citri str. 306,  section 434 of 469 of the
            complete genome
          Length = 9445

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   cgttgccgtggcggcgctgg 69
            ||||||||||||||||||||
Sbjct: 6329 cgttgccgtggcggcgctgg 6348

>gb|U15186.1|MLU15186 Mycobacterium leprae cosmid L471
          Length = 36241

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   ggtcatggcagcagcaatgc 39
            ||||||||||||||||||||
Sbjct: 4826 ggtcatggcagcagcaatgc 4845

>gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, complete sequence
          Length = 166253

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   cagggagaaggcctgctagt 360
             ||||||||||||||||||||
Sbjct: 45361 cagggagaaggcctgctagt 45380

>gb|AC026230.5|AC026230 Homo sapiens chromosome 5 clone CTD-2288O8, complete sequence
          Length = 114802

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  cagggagaaggcctgctagt 360
            ||||||||||||||||||||
Sbjct: 7064 cagggagaaggcctgctagt 7045

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 60      gcggcgctggtcgcgctgat 79
               ||||||||||||||||||||
Sbjct: 2340324 gcggcgctggtcgcgctgat 2340305

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 61      cggcgctggtcgcgctgatg 80
               ||||||||||||||||||||
Sbjct: 1722427 cggcgctggtcgcgctgatg 1722446


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,904,780
Number of Sequences: 3902068
Number of extensions: 2904780
Number of successful extensions: 65983
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65557
Number of HSP's gapped (non-prelim): 426
length of query: 386
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 364
effective length of database: 17,147,199,772
effective search space: 6241580717008
effective search space used: 6241580717008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)