| Clone Name | bags23e16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450483.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2515 Score = 829 bits (418), Expect = 0.0 Identities = 601/662 (90%) Strand = Plus / Plus Query: 2 cttacatcacaacagttagtacgaatacatcagttgtttcggcaggctaagtttgatgat 61 ||||||||||| || ||||| || ||||||||||| ||||||||||| || ||||||||| Sbjct: 1296 cttacatcacagcaattagttcggatacatcagttatttcggcaggcaaaatttgatgat 1355 Query: 62 cccagtggcaattgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1356 cccagtggcaattgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaa 1415 Query: 122 gagctgcaccctgatctggttgcgacacatgcaagcagtcctcaggtttttgaagggcat 181 ||||||||||||||||| ||||| || ||||||||||| || |||||||||||||| ||| Sbjct: 1416 gagctgcaccctgatctagttgctacgcatgcaagcagcccacaggtttttgaaggtcat 1475 Query: 182 ccatttattgttgaagccggagtaagcattggtgggaaagatgttaaacaaggtctaaat 241 ||||| || |||||||| ||| |||| |||||||| |||||||||||||| |||||||| Sbjct: 1476 ccattcatcgttgaagctggaataagtattggtggaaaagatgttaaacatggtctaaac 1535 Query: 242 atttttaggtttgcaaaccgcattccacttctttttgagcaaggtgctgatgtcatcaca 301 |||||||| | ||| ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1536 atttttagatatgcgaaccgaatcccacttctctttgaacaaggtgctgatgtcatcaca 1595 Query: 302 agaactgccctaaaaaggatcaattggagcatctacaaaattaatcagcagcaggacaag 361 |||||||| ||||||| ||||||||||||| ||||||||| ||||| |||||||||||| Sbjct: 1596 agaactgctttaaaaagaatcaattggagcagctacaaaataaatcaacagcaggacaag 1655 Query: 362 attggtgtctttgtgagcattgtcagtacaaagataccttttaaaggaactggaaaagag 421 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1656 attggtgtctttgttagcattgtaagtacaaagataccttttaaaggaactggaaaagag 1715 Query: 422 tatattggggatgatataacagaaatagcagatgctgttaagtccgcccttaagcagtgc 481 || ||||||||||| ||||| ||||||||| ||||||| |||| |||||||||||||| Sbjct: 1716 tacattggggatgacataaccgaaatagcatctgctgttcagtcagcccttaagcagtgt 1775 Query: 482 tgtgtccaactgaagtcaaagatagtgaagaaacttcaggctcgtgaacagcaggacagg 541 ||| | |||||||||||||||||||| |||||||| ||||||||||||| |||||||||| Sbjct: 1776 tgtcttcaactgaagtcaaagatagtaaagaaactacaggctcgtgaacggcaggacagg 1835 Query: 542 aaaaggaacctgaacaaatacattcctgatgtggcaaggacaattatggagactctggga 601 ||||||||||| |||| ||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 1836 aaaaggaacctaaacagatacattcctgatgttgcgagggcaattatggagactctggga 1895 Query: 602 gaacttgcagacgagtctccccccaagaggccacggtttgacaaggaagatgaggagctc 661 ||| ||||||| ||||||||||| ||||||||||| | ||| |||||||||||||| ||| Sbjct: 1896 gaaattgcagatgagtctcccccaaagaggccacgttatgataaggaagatgaggaactc 1955 Query: 662 ct 663 || Sbjct: 1956 ct 1957
>gb|AY371050.1| Oryza sativa (japonica cultivar-group) topoisomerase 6 subunit B-like protein mRNA, complete cds Length = 2480 Score = 829 bits (418), Expect = 0.0 Identities = 601/662 (90%) Strand = Plus / Plus Query: 2 cttacatcacaacagttagtacgaatacatcagttgtttcggcaggctaagtttgatgat 61 ||||||||||| || ||||| || ||||||||||| ||||||||||| || ||||||||| Sbjct: 1256 cttacatcacagcaattagttcggatacatcagttatttcggcaggcaaaatttgatgat 1315 Query: 62 cccagtggcaattgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1316 cccagtggcaattgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaa 1375 Query: 122 gagctgcaccctgatctggttgcgacacatgcaagcagtcctcaggtttttgaagggcat 181 ||||||||||||||||| ||||| || ||||||||||| || |||||||||||||| ||| Sbjct: 1376 gagctgcaccctgatctagttgctacgcatgcaagcagcccacaggtttttgaaggtcat 1435 Query: 182 ccatttattgttgaagccggagtaagcattggtgggaaagatgttaaacaaggtctaaat 241 ||||| || |||||||| ||| |||| |||||||| |||||||||||||| |||||||| Sbjct: 1436 ccattcatcgttgaagctggaataagtattggtggaaaagatgttaaacatggtctaaac 1495 Query: 242 atttttaggtttgcaaaccgcattccacttctttttgagcaaggtgctgatgtcatcaca 301 |||||||| | ||| ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1496 atttttagatatgcgaaccgaatcccacttctctttgaacaaggtgctgatgtcatcaca 1555 Query: 302 agaactgccctaaaaaggatcaattggagcatctacaaaattaatcagcagcaggacaag 361 |||||||| ||||||| ||||||||||||| ||||||||| ||||| |||||||||||| Sbjct: 1556 agaactgctttaaaaagaatcaattggagcagctacaaaataaatcaacagcaggacaag 1615 Query: 362 attggtgtctttgtgagcattgtcagtacaaagataccttttaaaggaactggaaaagag 421 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1616 attggtgtctttgttagcattgtaagtacaaagataccttttaaaggaactggaaaagag 1675 Query: 422 tatattggggatgatataacagaaatagcagatgctgttaagtccgcccttaagcagtgc 481 || ||||||||||| ||||| ||||||||| ||||||| |||| |||||||||||||| Sbjct: 1676 tacattggggatgacataaccgaaatagcatctgctgttcagtcagcccttaagcagtgt 1735 Query: 482 tgtgtccaactgaagtcaaagatagtgaagaaacttcaggctcgtgaacagcaggacagg 541 ||| | |||||||||||||||||||| |||||||| ||||||||||||| |||||||||| Sbjct: 1736 tgtcttcaactgaagtcaaagatagtaaagaaactacaggctcgtgaacggcaggacagg 1795 Query: 542 aaaaggaacctgaacaaatacattcctgatgtggcaaggacaattatggagactctggga 601 ||||||||||| |||| ||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 1796 aaaaggaacctaaacagatacattcctgatgttgcgagggcaattatggagactctggga 1855 Query: 602 gaacttgcagacgagtctccccccaagaggccacggtttgacaaggaagatgaggagctc 661 ||| ||||||| ||||||||||| ||||||||||| | ||| |||||||||||||| ||| Sbjct: 1856 gaaattgcagatgagtctcccccaaagaggccacgttatgataaggaagatgaggaactc 1915 Query: 662 ct 663 || Sbjct: 1916 ct 1917
>dbj|AK101452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039N14, full insert sequence Length = 2515 Score = 821 bits (414), Expect = 0.0 Identities = 600/662 (90%) Strand = Plus / Plus Query: 2 cttacatcacaacagttagtacgaatacatcagttgtttcggcaggctaagtttgatgat 61 ||||||||||| || ||||| || ||||||||||| |||||||||| || ||||||||| Sbjct: 1296 cttacatcacagcaattagttcggatacatcagttaattcggcaggcaaaatttgatgat 1355 Query: 62 cccagtggcaattgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1356 cccagtggcaattgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaa 1415 Query: 122 gagctgcaccctgatctggttgcgacacatgcaagcagtcctcaggtttttgaagggcat 181 ||||||||||||||||| ||||| || ||||||||||| || |||||||||||||| ||| Sbjct: 1416 gagctgcaccctgatctagttgctacgcatgcaagcagcccacaggtttttgaaggtcat 1475 Query: 182 ccatttattgttgaagccggagtaagcattggtgggaaagatgttaaacaaggtctaaat 241 ||||| || |||||||| ||| |||| |||||||| |||||||||||||| |||||||| Sbjct: 1476 ccattcatcgttgaagctggaataagtattggtggaaaagatgttaaacatggtctaaac 1535 Query: 242 atttttaggtttgcaaaccgcattccacttctttttgagcaaggtgctgatgtcatcaca 301 |||||||| | ||| ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1536 atttttagatatgcgaaccgaatcccacttctctttgaacaaggtgctgatgtcatcaca 1595 Query: 302 agaactgccctaaaaaggatcaattggagcatctacaaaattaatcagcagcaggacaag 361 |||||||| ||||||| ||||||||||||| ||||||||| ||||| |||||||||||| Sbjct: 1596 agaactgctttaaaaagaatcaattggagcagctacaaaataaatcaacagcaggacaag 1655 Query: 362 attggtgtctttgtgagcattgtcagtacaaagataccttttaaaggaactggaaaagag 421 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1656 attggtgtctttgttagcattgtaagtacaaagataccttttaaaggaactggaaaagag 1715 Query: 422 tatattggggatgatataacagaaatagcagatgctgttaagtccgcccttaagcagtgc 481 || ||||||||||| ||||| ||||||||| ||||||| |||| |||||||||||||| Sbjct: 1716 tacattggggatgacataaccgaaatagcatctgctgttcagtcagcccttaagcagtgt 1775 Query: 482 tgtgtccaactgaagtcaaagatagtgaagaaacttcaggctcgtgaacagcaggacagg 541 ||| | |||||||||||||||||||| |||||||| ||||||||||||| |||||||||| Sbjct: 1776 tgtcttcaactgaagtcaaagatagtaaagaaactacaggctcgtgaacggcaggacagg 1835 Query: 542 aaaaggaacctgaacaaatacattcctgatgtggcaaggacaattatggagactctggga 601 ||||||||||| |||| ||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 1836 aaaaggaacctaaacagatacattcctgatgttgcgagggcaattatggagactctggga 1895 Query: 602 gaacttgcagacgagtctccccccaagaggccacggtttgacaaggaagatgaggagctc 661 ||| ||||||| ||||||||||| ||||||||||| | ||| |||||||||||||| ||| Sbjct: 1896 gaaattgcagatgagtctcccccaaagaggccacgttatgataaggaagatgaggaactc 1955 Query: 662 ct 663 || Sbjct: 1956 ct 1957
>emb|AJ582989.1| Oryza sativa (indica cultivar-group) mRNA for putative topoisomerase VI subunit B (topo6B gene) Length = 2091 Score = 813 bits (410), Expect = 0.0 Identities = 599/662 (90%) Strand = Plus / Plus Query: 2 cttacatcacaacagttagtacgaatacatcagttgtttcggcaggctaagtttgatgat 61 ||||||||||| || ||||| || ||||||||||| ||||||||||| || ||||||||| Sbjct: 1213 cttacatcacagcaattagttcggatacatcagttatttcggcaggcaaaatttgatgat 1272 Query: 62 cccagtggcaattgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1273 cccagtggcaattgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaa 1332 Query: 122 gagctgcaccctgatctggttgcgacacatgcaagcagtcctcaggtttttgaagggcat 181 ||||||||||||||||| ||||| || ||||||||||| || |||||||||||||| ||| Sbjct: 1333 gagctgcaccctgatctagttgctacgcatgcaagcagcccacaggtttttgaaggtcat 1392 Query: 182 ccatttattgttgaagccggagtaagcattggtgggaaagatgttaaacaaggtctaaat 241 ||||| || |||||||| ||| |||| |||||||| |||||||||||||| |||||||| Sbjct: 1393 ccattcatcgttgaagctggaataagtattggtggaaaagatgttaaacatggtctaaac 1452 Query: 242 atttttaggtttgcaaaccgcattccacttctttttgagcaaggtgctgatgtcatcaca 301 |||||||| | ||| ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1453 atttttagatatgcgaaccgaatcccacttctctttgaacaaggtgctgatgtcatcaca 1512 Query: 302 agaactgccctaaaaaggatcaattggagcatctacaaaattaatcagcagcaggacaag 361 |||||||| ||||||| ||||||||||||| ||||||||| ||||| |||||||||||| Sbjct: 1513 agaactgctttaaaaagaatcaattggagcagctacaaaataaatcaacagcaggacaag 1572 Query: 362 attggtgtctttgtgagcattgtcagtacaaagataccttttaaaggaactggaaaagag 421 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1573 attggtgtctttgttagcattgtaagtacaaagataccttttaaaggaactggaaaagag 1632 Query: 422 tatattggggatgatataacagaaatagcagatgctgttaagtccgcccttaagcagtgc 481 || ||||||||||| ||||| ||||||||| ||||||| |||| |||||||||||||| Sbjct: 1633 tacattggggatgacataaccgaaatagcatctgctgttcagtcagcccttaagcagtgt 1692 Query: 482 tgtgtccaactgaagtcaaagatagtgaagaaacttcaggctcgtgaacagcaggacagg 541 ||| | |||||||||||||||||||| |||||||| ||||||||||||| |||||||||| Sbjct: 1693 tgtcttcaactgaagtcaaagatagtaaagaaactacaggctcgtgaacggcaggacagg 1752 Query: 542 aaaaggaacctgaacaaatacattcctgatgtggcaaggacaattatggagactctggga 601 ||||||||||| |||| ||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 1753 aaaaggaacctaaacagatacattcctgatgttgcgagggcaattatggagactctggga 1812 Query: 602 gaacttgcagacgagtctccccccaagaggccacggtttgacaaggaagatgaggagctc 661 || ||||||| ||||||||||| |||||||||| | ||| |||||||||||||| ||| Sbjct: 1813 gagattgcagatgagtctcccccaaagaggccacattatgataaggaagatgaggaactc 1872 Query: 662 ct 663 || Sbjct: 1873 ct 1874
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 190 bits (96), Expect = 4e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 325 ttggagcatctacaaaattaatcagcagcaggacaagattggtgtctttgtgagcattgt 384 |||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 5827069 ttggagcagctacaaaataaatcaacagcaggacaagattggtgtctttgttagcattgt 5827128 Query: 385 cagtacaaagataccttttaaaggaactggaaaagagtatattggggatgatataacaga 444 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 5827129 aagtacaaagataccttttaaaggaactggaaaagagtacattggggatgacataaccga 5827188 Query: 445 aatagcagatgctgtt 460 ||||||| ||||||| Sbjct: 5827189 aatagcatctgctgtt 5827204 Score = 147 bits (74), Expect = 5e-32 Identities = 83/86 (96%) Strand = Plus / Plus Query: 74 tgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaagagctgcaccct 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5825368 tgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaagagctgcaccct 5825427 Query: 134 gatctggttgcgacacatgcaagcag 159 ||||| ||||| || ||||||||||| Sbjct: 5825428 gatctagttgctacgcatgcaagcag 5825453 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Plus Query: 559 atacattcctgatgtggcaaggacaattatggagactctgggagaacttgcagacgagtc 618 ||||||||||||||| || ||| ||||||||||||||||||||||| ||||||| ||||| Sbjct: 5827804 atacattcctgatgttgcgagggcaattatggagactctgggagaaattgcagatgagtc 5827863 Query: 619 tccccccaagaggccacggtttgacaaggaagatgaggagctcct 663 |||||| ||||||||||| | ||| |||||||||||||| ||||| Sbjct: 5827864 tcccccaaagaggccacgttatgataaggaagatgaggaactcct 5827908 Score = 127 bits (64), Expect = 5e-26 Identities = 88/96 (91%) Strand = Plus / Plus Query: 462 agtccgcccttaagcagtgctgtgtccaactgaagtcaaagatagtgaagaaacttcagg 521 |||| |||||||||||||| ||| | |||||||||||||||||||| |||||||| |||| Sbjct: 5827273 agtcagcccttaagcagtgttgtcttcaactgaagtcaaagatagtaaagaaactacagg 5827332 Query: 522 ctcgtgaacagcaggacaggaaaaggaacctgaaca 557 ||||||||| ||||||||||||||||||||| |||| Sbjct: 5827333 ctcgtgaacggcaggacaggaaaaggaacctaaaca 5827368 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 233 ggtctaaatatttttaggtttgcaaaccgcattccacttctttttgagcaaggtgctgat 292 |||||||| |||||||| | ||| ||||| || |||||||| ||||| |||||||||||| Sbjct: 5826886 ggtctaaacatttttagatatgcgaaccgaatcccacttctctttgaacaaggtgctgat 5826945 Query: 293 gtcatcacaagaactgccctaaaaaggatcaa 324 ||||||||||||||||| ||||||| ||||| Sbjct: 5826946 gtcatcacaagaactgctttaaaaagaatcaa 5826977 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 2 cttacatcacaacagttagtacgaatacatcagttgtttcggcaggctaagtttgatgat 61 ||||||||||| || ||||| || ||||||||||| ||||||||||| || ||||||||| Sbjct: 5825189 cttacatcacagcaattagttcggatacatcagttatttcggcaggcaaaatttgatgat 5825248 Query: 62 cccagtggcaat 73 |||||||||||| Sbjct: 5825249 cccagtggcaat 5825260 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 164 caggtttttgaagggcatccatttattgttgaagccggagtaagcattggtgggaaagat 223 |||||||||||||| |||||||| || |||||||| ||| |||| |||||||| |||||| Sbjct: 5825529 caggtttttgaaggtcatccattcatcgttgaagctggaataagtattggtggaaaagat 5825588 Query: 224 gttaaaca 231 |||||||| Sbjct: 5825589 gttaaaca 5825596
>dbj|AP006528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0651G05 Length = 153258 Score = 190 bits (96), Expect = 4e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 325 ttggagcatctacaaaattaatcagcagcaggacaagattggtgtctttgtgagcattgt 384 |||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 18556 ttggagcagctacaaaataaatcaacagcaggacaagattggtgtctttgttagcattgt 18615 Query: 385 cagtacaaagataccttttaaaggaactggaaaagagtatattggggatgatataacaga 444 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 18616 aagtacaaagataccttttaaaggaactggaaaagagtacattggggatgacataaccga 18675 Query: 445 aatagcagatgctgtt 460 ||||||| ||||||| Sbjct: 18676 aatagcatctgctgtt 18691 Score = 147 bits (74), Expect = 5e-32 Identities = 83/86 (96%) Strand = Plus / Plus Query: 74 tgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaagagctgcaccct 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16855 tgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaagagctgcaccct 16914 Query: 134 gatctggttgcgacacatgcaagcag 159 ||||| ||||| || ||||||||||| Sbjct: 16915 gatctagttgctacgcatgcaagcag 16940 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Plus Query: 559 atacattcctgatgtggcaaggacaattatggagactctgggagaacttgcagacgagtc 618 ||||||||||||||| || ||| ||||||||||||||||||||||| ||||||| ||||| Sbjct: 19291 atacattcctgatgttgcgagggcaattatggagactctgggagaaattgcagatgagtc 19350 Query: 619 tccccccaagaggccacggtttgacaaggaagatgaggagctcct 663 |||||| ||||||||||| | ||| |||||||||||||| ||||| Sbjct: 19351 tcccccaaagaggccacgttatgataaggaagatgaggaactcct 19395 Score = 127 bits (64), Expect = 5e-26 Identities = 88/96 (91%) Strand = Plus / Plus Query: 462 agtccgcccttaagcagtgctgtgtccaactgaagtcaaagatagtgaagaaacttcagg 521 |||| |||||||||||||| ||| | |||||||||||||||||||| |||||||| |||| Sbjct: 18760 agtcagcccttaagcagtgttgtcttcaactgaagtcaaagatagtaaagaaactacagg 18819 Query: 522 ctcgtgaacagcaggacaggaaaaggaacctgaaca 557 ||||||||| ||||||||||||||||||||| |||| Sbjct: 18820 ctcgtgaacggcaggacaggaaaaggaacctaaaca 18855 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 233 ggtctaaatatttttaggtttgcaaaccgcattccacttctttttgagcaaggtgctgat 292 |||||||| |||||||| | ||| ||||| || |||||||| ||||| |||||||||||| Sbjct: 18373 ggtctaaacatttttagatatgcgaaccgaatcccacttctctttgaacaaggtgctgat 18432 Query: 293 gtcatcacaagaactgccctaaaaaggatcaa 324 ||||||||||||||||| ||||||| ||||| Sbjct: 18433 gtcatcacaagaactgctttaaaaagaatcaa 18464 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 2 cttacatcacaacagttagtacgaatacatcagttgtttcggcaggctaagtttgatgat 61 ||||||||||| || ||||| || ||||||||||| ||||||||||| || ||||||||| Sbjct: 16676 cttacatcacagcaattagttcggatacatcagttatttcggcaggcaaaatttgatgat 16735 Query: 62 cccagtggcaat 73 |||||||||||| Sbjct: 16736 cccagtggcaat 16747 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 164 caggtttttgaagggcatccatttattgttgaagccggagtaagcattggtgggaaagat 223 |||||||||||||| |||||||| || |||||||| ||| |||| |||||||| |||||| Sbjct: 17016 caggtttttgaaggtcatccattcatcgttgaagctggaataagtattggtggaaaagat 17075 Query: 224 gttaaaca 231 |||||||| Sbjct: 17076 gttaaaca 17083
>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701E06 Length = 123415 Score = 190 bits (96), Expect = 4e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 325 ttggagcatctacaaaattaatcagcagcaggacaagattggtgtctttgtgagcattgt 384 |||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 123274 ttggagcagctacaaaataaatcaacagcaggacaagattggtgtctttgttagcattgt 123333 Query: 385 cagtacaaagataccttttaaaggaactggaaaagagtatattggggatgatataacaga 444 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 123334 aagtacaaagataccttttaaaggaactggaaaagagtacattggggatgacataaccga 123393 Query: 445 aatagcagatgctgtt 460 ||||||| ||||||| Sbjct: 123394 aatagcatctgctgtt 123409 Score = 147 bits (74), Expect = 5e-32 Identities = 83/86 (96%) Strand = Plus / Plus Query: 74 tgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaagagctgcaccct 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121573 tgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaagagctgcaccct 121632 Query: 134 gatctggttgcgacacatgcaagcag 159 ||||| ||||| || ||||||||||| Sbjct: 121633 gatctagttgctacgcatgcaagcag 121658 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 233 ggtctaaatatttttaggtttgcaaaccgcattccacttctttttgagcaaggtgctgat 292 |||||||| |||||||| | ||| ||||| || |||||||| ||||| |||||||||||| Sbjct: 123091 ggtctaaacatttttagatatgcgaaccgaatcccacttctctttgaacaaggtgctgat 123150 Query: 293 gtcatcacaagaactgccctaaaaaggatcaa 324 ||||||||||||||||| ||||||| ||||| Sbjct: 123151 gtcatcacaagaactgctttaaaaagaatcaa 123182 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 2 cttacatcacaacagttagtacgaatacatcagttgtttcggcaggctaagtttgatgat 61 ||||||||||| || ||||| || ||||||||||| ||||||||||| || ||||||||| Sbjct: 121394 cttacatcacagcaattagttcggatacatcagttatttcggcaggcaaaatttgatgat 121453 Query: 62 cccagtggcaat 73 |||||||||||| Sbjct: 121454 cccagtggcaat 121465 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 164 caggtttttgaagggcatccatttattgttgaagccggagtaagcattggtgggaaagat 223 |||||||||||||| |||||||| || |||||||| ||| |||| |||||||| |||||| Sbjct: 121734 caggtttttgaaggtcatccattcatcgttgaagctggaataagtattggtggaaaagat 121793 Query: 224 gttaaaca 231 |||||||| Sbjct: 121794 gttaaaca 121801
>gb|BT012968.1| Lycopersicon esculentum clone 114162R, mRNA sequence Length = 2300 Score = 163 bits (82), Expect = 9e-37 Identities = 325/406 (80%) Strand = Plus / Plus Query: 35 ttgtttcggcaggctaagtttgatgatcccagtggcaattgtcttagtcctgcaggtgaa 94 |||||||| || || || ||||||||||||||||| || | | ||||| || || ||| Sbjct: 1359 ttgtttcgtcaagccaaatttgatgatcccagtggtgatattttaagtcccgctggagaa 1418 Query: 95 tacaatttacgtctaggtatcataaaagagctgcaccctgatctggttgcgacacatgca 154 || ||| ||||||| || || ||||| ||||||||||| ||| ||||||| || | || Sbjct: 1419 tataatctacgtcttggcattataaaggagctgcacccagatatggttgcaaccttttca 1478 Query: 155 agcagtcctcaggtttttgaagggcatccatttattgttgaagccggagtaagcattggt 214 | ||| |||| || || ||||| ||||||||||| || ||||| ||||| || ||||| Sbjct: 1479 ggaagtgctcaagtattcgaaggtcatccatttatcgtggaagctggagttagtgttggt 1538 Query: 215 gggaaagatgttaaacaaggtctaaatatttttaggtttgcaaaccgcattccacttctt 274 ||||||||||| |||||||| || ||| |||| | ||||| || || |||||||||||| Sbjct: 1539 gggaaagatgtcaaacaagggctgaatgttttccgatttgctaatcggattccacttctt 1598 Query: 275 tttgagcaaggtgctgatgtcatcacaagaactgccctaaaaaggatcaattggagcatc 334 |||||||||||||||||||| | ||||| ||||| | || || |||||||||| || Sbjct: 1599 tttgagcaaggtgctgatgttgttacaaggactgctatgaagagaatcaattggaacagt 1658 Query: 335 tacaaaattaatcagcagcaggacaagattggtgtctttgtgagcattgtcagtacaaag 394 ||||| || || || || ||||| ||||||||||||||||||||||| || || || Sbjct: 1659 tacaagatcaaccaaacacaagacaaaattggtgtctttgtgagcattgttagcaccaaa 1718 Query: 395 ataccttttaaaggaactggaaaagagtatattggggatgatataa 440 || || |||||||| ||||| || ||||||||||| ||||| |||| Sbjct: 1719 atcccctttaaagggactggcaaggagtatattggagatgacataa 1764
>gb|AC150786.21| Medicago truncatula clone mth2-170o9, complete sequence Length = 142649 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 335 tacaaaattaatcagcagcaggacaagattggtgtctttgtgagcattgtcagtacaaag 394 ||||||||||| ||| || |||||||||||||||||||| || || || || ||||| Sbjct: 124592 tacaaaattaaccaggtacaagacaagattggtgtctttgtaagtatcgtgagcacaaaa 124651 Query: 395 ataccttttaaaggaactggaaaagagtatattggggatgatataac 441 || || |||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 124652 atcccatttaaaggaactggaaaagaatacattggagatgacataac 124698 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 5 acatcacaacagttagtacgaatacatcagttgtttcggcaggctaagtttgatgatccc 64 |||||||| || |||||||| || |||||||||||||| || || || ||||| ||||| Sbjct: 122459 acatcacagcaattagtacgcattcatcagttgtttcgtcaagccaaatttgacgatcct 122518 Query: 65 agtgg 69 ||||| Sbjct: 122519 agtgg 122523 Score = 44.1 bits (22), Expect = 0.58 Identities = 52/62 (83%) Strand = Plus / Plus Query: 263 attccacttctttttgagcaaggtgctgatgtcatcacaagaactgccctaaaaaggatc 322 |||||||| ||||| ||||||||||| ||||| |||| || ||||| || ||||| ||| Sbjct: 124377 attccactacttttcgagcaaggtgcagatgttgtcaccaggactgcgcttaaaagaatc 124436 Query: 323 aa 324 || Sbjct: 124437 aa 124438
>ref|NM_112969.2| Arabidopsis thaliana ATTOP6B (BRASSINOSTEROID INSENSITIVE 3) AT3G20780 (ATTOP6B) mRNA, complete cds Length = 2212 Score = 67.9 bits (34), Expect = 4e-08 Identities = 241/310 (77%) Strand = Plus / Plus Query: 20 gtacgaatacatcagttgtttcggcaggctaagtttgatgatcccagtggcaattgtctt 79 ||||| ||||||||||| || || || ||||| || || || || ||||| |||||||| Sbjct: 1224 gtacgcatacatcagttattccgccaagctaaattcgacgaccctagtggtgattgtctt 1283 Query: 80 agtcctgcaggtgaatacaatttacgtctaggtatcataaaagagctgcaccctgatctg 139 || || ||||| ||||||||| | |||||||| || || || ||||| || || ||| || Sbjct: 1284 agcccagcaggagaatacaatcttcgtctagggattattaaggagctacatccagatatg 1343 Query: 140 gttgcgacacatgcaagcagtcctcaggtttttgaagggcatccatttattgttgaagcc 199 || || || || | ||||| ||||||| || ||||| ||||| || ||||||||||| Sbjct: 1344 gtggcaacgtattccggcagtgctcaggtcttcgaaggtcatcctttcattgttgaagct 1403 Query: 200 ggagtaagcattggtgggaaagatgttaaacaaggtctaaatatttttaggtttgcaaac 259 || || || | ||||| | ||| || ||||| || | || || || | ||||||||| Sbjct: 1404 ggtgttagtttgggtggaagagacgtgaaacaggggatcaacatattccgttttgcaaac 1463 Query: 260 cgcattccacttctttttgagcaaggtgctgatgtcatcacaagaactgccctaaaaagg 319 || ||||| || |||||||| ||||| |||||||| |||| || || ||| ||||||| Sbjct: 1464 cgtattcctctcctttttgaacaaggagctgatgttgtcaccaggacggccttaaaaaga 1523 Query: 320 atcaattgga 329 |||||||||| Sbjct: 1524 atcaattgga 1533
>emb|AJ297843.1|ATH297843 Arabidopsis thaliana mRNA for topoisomerase 6 subunit B (top6B gene) Length = 2212 Score = 67.9 bits (34), Expect = 4e-08 Identities = 241/310 (77%) Strand = Plus / Plus Query: 20 gtacgaatacatcagttgtttcggcaggctaagtttgatgatcccagtggcaattgtctt 79 ||||| ||||||||||| || || || ||||| || || || || ||||| |||||||| Sbjct: 1224 gtacgcatacatcagttattccgccaagctaaattcgacgaccctagtggtgattgtctt 1283 Query: 80 agtcctgcaggtgaatacaatttacgtctaggtatcataaaagagctgcaccctgatctg 139 || || ||||| ||||||||| | |||||||| || || || ||||| || || ||| || Sbjct: 1284 agcccagcaggagaatacaatcttcgtctagggattattaaggagctacatccagatatg 1343 Query: 140 gttgcgacacatgcaagcagtcctcaggtttttgaagggcatccatttattgttgaagcc 199 || || || || | ||||| ||||||| || ||||| ||||| || ||||||||||| Sbjct: 1344 gtggcaacgtattccggcagtgctcaggtcttcgaaggtcatcctttcattgttgaagct 1403 Query: 200 ggagtaagcattggtgggaaagatgttaaacaaggtctaaatatttttaggtttgcaaac 259 || || || | ||||| | ||| || ||||| || | || || || | ||||||||| Sbjct: 1404 ggtgttagtttgggtggaagagacgtgaaacaggggatcaacatattccgttttgcaaac 1463 Query: 260 cgcattccacttctttttgagcaaggtgctgatgtcatcacaagaactgccctaaaaagg 319 || ||||| || |||||||| ||||| |||||||| |||| || || ||| ||||||| Sbjct: 1464 cgtattcctctcctttttgaacaaggagctgatgttgtcaccaggacggccttaaaaaga 1523 Query: 320 atcaattgga 329 |||||||||| Sbjct: 1524 atcaattgga 1533
>dbj|AB025629.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MOE17 Length = 81677 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 251 tttgcaaaccgcattccacttctttttgagcaaggtgctgatgtcatcacaagaactgcc 310 ||||||||||| ||||| || |||||||| ||||| |||||||| |||| || || ||| Sbjct: 25577 tttgcaaaccgtattcctctcctttttgaacaaggagctgatgttgtcaccaggacggcc 25518 Query: 311 ctaaaaaggatcaa 324 ||||||| ||||| Sbjct: 25517 ttaaaaagaatcaa 25504
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 gcaaggtgctgatgtcatcac 300 ||||||||||||||||||||| Sbjct: 65198 gcaaggtgctgatgtcatcac 65178
>ref|XM_618624.2| PREDICTED: Bos taurus similar to Epidermal growth factor receptor kinase substrate 8 (LOC538419), mRNA Length = 3653 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 tctaaatatttttaggtttgc 255 ||||||||||||||||||||| Sbjct: 2848 tctaaatatttttaggtttgc 2868
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 tgagcaaggtgctgatgtcat 297 ||||||||||||||||||||| Sbjct: 327108 tgagcaaggtgctgatgtcat 327088
>gb|AC120837.6| Mus musculus Strain C57BL6/J chromosome 11 BAC, RP23-439E2, Complete Sequence, complete sequence Length = 211996 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 585 ttatggagactctgggagaac 605 ||||||||||||||||||||| Sbjct: 78161 ttatggagactctgggagaac 78181
>emb|AL031293.1|HS864I18 Human DNA sequence from clone RP5-864I18 on chromosome 1p36.11-36.33 Contains ESTs, STSs, GSSs, genomic marker D1S2728 and a ca repeat polymorphism, complete sequence Length = 106018 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 607 tgcagacgagtctccccccaagaggccac 635 |||||| |||||| ||||||||||||||| Sbjct: 40806 tgcagaagagtcttcccccaagaggccac 40834
>emb|AL603745.16| Mouse DNA sequence from clone RP23-392I13 on chromosome 11 Contains the 5' end of the Rad51l3 gene for RAD51-like 3 (S. cerevisiae), two novel genes, the gene for a novel WD40 repeat containing protein, the Cmya4 gene for cardiomyopathy associated 4, a novel gene, the Slfn5, Slfn9, Slfn8 and Slfn2 genes for schlafen 5, 9, 8 and 2, a SET domain-containing protein 8 (Set8) pseudogene, a ribosomal protein L12 (Rpl12) pseudogene, a schlafen (Slfn) pseudogene and a CpG island, complete sequence Length = 198392 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 585 ttatggagactctgggagaac 605 ||||||||||||||||||||| Sbjct: 17585 ttatggagactctgggagaac 17565
>gb|AC023946.5| Homo sapiens chromosome 11, clone RP11-567I13, complete sequence Length = 187380 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 638 tttgacaaggaagatgaggag 658 ||||||||||||||||||||| Sbjct: 77899 tttgacaaggaagatgaggag 77879
>gb|AC104031.6| Homo sapiens chromosome 11, clone RP11-483L5, complete sequence Length = 212779 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 638 tttgacaaggaagatgaggag 658 ||||||||||||||||||||| Sbjct: 188834 tttgacaaggaagatgaggag 188814
>gb|AC008226.10|AC008226 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone BACR02B19, complete sequence Length = 171286 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tgatgatcccagtggcaattg 75 ||||||||||||||||||||| Sbjct: 30387 tgatgatcccagtggcaattg 30407
>gb|AC008029.3|AC008029 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone BACR01C11, complete sequence Length = 176991 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tgatgatcccagtggcaattg 75 ||||||||||||||||||||| Sbjct: 176758 tgatgatcccagtggcaattg 176778
>gb|AC016906.7| Homo sapiens BAC clone RP11-436E24 from 2, complete sequence Length = 183045 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 taaatatttttaggtttgcaaaccg 261 ||||||||||||| ||||||||||| Sbjct: 121789 taaatatttttagctttgcaaaccg 121813
>gb|AE003672.4| Drosophila melanogaster chromosome 3R, section 12 of 118 of the complete sequence Length = 301379 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tgatgatcccagtggcaattg 75 ||||||||||||||||||||| Sbjct: 228167 tgatgatcccagtggcaattg 228187
>emb|BX088552.1|CNS09S4T Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone CITB-248O2 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 190320 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 585 ttatggagactctgggagaac 605 ||||||||||||||||||||| Sbjct: 24756 ttatggagactctgggagaac 24736
>emb|AL713882.1|CNS07YOZ Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 4B7 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 132348 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 585 ttatggagactctgggagaac 605 ||||||||||||||||||||| Sbjct: 58145 ttatggagactctgggagaac 58165
>ref|XM_462530.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G24035g) partial mRNA Length = 948 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ttgaagggcatccatttatt 190 |||||||||||||||||||| Sbjct: 76 ttgaagggcatccatttatt 57
>gb|AC025794.9| Mus musculus chromosome 19, clone RP23-62O7, complete sequence Length = 242418 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 gaaaaggaacctgaacaaat 560 |||||||||||||||||||| Sbjct: 143650 gaaaaggaacctgaacaaat 143669
>gb|AC110256.12| Mus musculus chromosome 6, clone RP23-274K3, complete sequence Length = 240425 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 388 tacaaagataccttttaaaggaac 411 ||||| |||||||||||||||||| Sbjct: 193761 tacaaggataccttttaaaggaac 193784
>emb|CT010493.12| Mouse DNA sequence from clone RP23-140P6 on chromosome 14, complete sequence Length = 223982 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 gaaatagcagatgctgttaa 462 |||||||||||||||||||| Sbjct: 116168 gaaatagcagatgctgttaa 116149
>gb|AC131764.3| Mus musculus BAC clone RP24-239L16 from chromosome 6, complete sequence Length = 210145 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 tacaaagataccttttaaaggaac 411 ||||| |||||||||||||||||| Sbjct: 150651 tacaaggataccttttaaaggaac 150628
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gagcaaggtgctgatgtcat 297 |||||||||||||||||||| Sbjct: 356658 gagcaaggtgctgatgtcat 356639
>ref|NM_007698.2| Mus musculus cholinergic receptor, muscarinic 1, CNS (Chrm1), mRNA Length = 3816 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 gaaaaggaacctgaacaaat 560 |||||||||||||||||||| Sbjct: 3128 gaaaaggaacctgaacaaat 3147
>ref|XM_783109.1| PREDICTED: Strongylocentrotus purpuratus similar to Golgi coiled coil protein 1 (LOC583187), partial mRNA Length = 1731 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tttttgaagggcatccattt 187 |||||||||||||||||||| Sbjct: 360 tttttgaagggcatccattt 341
>emb|AL391559.13| Human DNA sequence from clone RP3-470J8 on chromosome 6, complete sequence Length = 85766 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 ttccacttctttttgagcaa 283 |||||||||||||||||||| Sbjct: 23780 ttccacttctttttgagcaa 23799
>emb|AL031123.14|HS80N2 Human DNA sequence from clone RP1-80N2 on chromosome 6p24.1-25.3 Contains the gene for MD-1,RP105-associated, part of a putative novel gene and three putative CpG islands, complete sequence Length = 193731 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 cagcaggacaggaaaaggaa 549 |||||||||||||||||||| Sbjct: 187286 cagcaggacaggaaaaggaa 187305
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 ttgaagggcatccatttatt 190 |||||||||||||||||||| Sbjct: 1839717 ttgaagggcatccatttatt 1839736
>gb|AF491507.1| Caenorhabditis elegans strain PB305 TRA-2 gene, partial cds Length = 654 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 220 acaaggtctaaatattttta 239
>gb|AF491506.1| Caenorhabditis elegans strain CB4932 TRA-2 gene, partial cds Length = 599 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 188 acaaggtctaaatattttta 207
>gb|AF491505.1| Caenorhabditis elegans strain CB4857 TRA-2 gene, partial cds Length = 592 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 180 acaaggtctaaatattttta 199
>gb|AF491504.1| Caenorhabditis elegans strain CB4851 TRA-2 gene, partial cds Length = 637 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 227 acaaggtctaaatattttta 246
>gb|AF491503.1| Caenorhabditis elegans strain CB4855 TRA-2 gene, partial cds Length = 567 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 193 acaaggtctaaatattttta 212
>gb|AF491502.1| Caenorhabditis elegans strain CB4853 TRA-2 gene, partial cds Length = 622 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 185 acaaggtctaaatattttta 204
>gb|AF491501.1| Caenorhabditis elegans strain CB4858 TRA-2 gene, partial cds Length = 644 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 201 acaaggtctaaatattttta 220
>gb|AF491500.1| Caenorhabditis elegans strain DR1344 TRA-2 gene, partial cds Length = 636 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 193 acaaggtctaaatattttta 212
>gb|AF491499.1| Caenorhabditis elegans strain PB307 TRA-2 gene, partial cds Length = 601 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 193 acaaggtctaaatattttta 212
>gb|AF491498.1| Caenorhabditis elegans strain PB303 TRA-2 gene, partial cds Length = 605 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 193 acaaggtctaaatattttta 212
>gb|AF491497.1| Caenorhabditis elegans strain PB306 TRA-2 gene, partial cds Length = 602 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 192 acaaggtctaaatattttta 211
>gb|AF491496.1| Caenorhabditis elegans strain TR388 TRA-2 gene, partial cds Length = 652 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 215 acaaggtctaaatattttta 234
>gb|AF491495.1| Caenorhabditis elegans strain CB4854 TRA-2 gene, partial cds Length = 595 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 185 acaaggtctaaatattttta 204
>gb|AF491494.1| Caenorhabditis elegans strain CB4852 TRA-2 gene, partial cds Length = 606 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 193 acaaggtctaaatattttta 212
>gb|AF491493.1| Caenorhabditis elegans strain AB2 TRA-2 gene, partial cds Length = 619 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 179 acaaggtctaaatattttta 198
>gb|AF491492.1| Caenorhabditis elegans strain DH424 TRA-2 gene, partial cds Length = 547 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 143 acaaggtctaaatattttta 162
>gb|AF491491.1| Caenorhabditis elegans strain CB4507 TRA-2 gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 216 acaaggtctaaatattttta 235
>gb|AF491490.1| Caenorhabditis elegans strain CB4856 TRA-2 gene, partial cds Length = 592 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 185 acaaggtctaaatattttta 204
>gb|AF491489.1| Caenorhabditis elegans strain AB1 TRA-2 gene, partial cds Length = 591 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 193 acaaggtctaaatattttta 212
>emb|CR406846.1| Gallus gallus finished cDNA, clone ChEST733d6 Length = 1381 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 409 aactggaaaagagtatattgggga 432 |||||| ||||||||||||||||| Sbjct: 804 aactgggaaagagtatattgggga 827
>dbj|AK077812.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830499B02 product:unclassifiable, full insert sequence Length = 2435 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 tacaaagataccttttaaaggaac 411 ||||| |||||||||||||||||| Sbjct: 2397 tacaaggataccttttaaaggaac 2374
>dbj|AK081248.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030026C22 product:MUSCARINIC ACETYLCHOLINE RECEPTOR M1, full insert sequence Length = 3816 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 gaaaaggaacctgaacaaat 560 |||||||||||||||||||| Sbjct: 3128 gaaaaggaacctgaacaaat 3147
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gcaattgtcttagtcctgcaggtg 92 |||||||||| ||||||||||||| Sbjct: 8344815 gcaattgtctcagtcctgcaggtg 8344792
>ref|XM_218837.3| PREDICTED: Rattus norvegicus Bloom syndrome (predicted) (Blm_predicted), mRNA Length = 5259 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 tctgggagaacttgcagacg 614 |||||||||||||||||||| Sbjct: 4581 tctgggagaacttgcagacg 4600
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gcaattgtcttagtcctgcaggtg 92 |||||||||| ||||||||||||| Sbjct: 138746 gcaattgtctcagtcctgcaggtg 138723
>dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0503G09 Length = 59843 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gcaattgtcttagtcctgcaggtg 92 |||||||||| ||||||||||||| Sbjct: 9441 gcaattgtctcagtcctgcaggtg 9418
>emb|AL845440.23| Mouse DNA sequence from clone RP23-294B7 on chromosome 2, complete sequence Length = 188464 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 476 cagtgctgtgtccaactgaagtca 499 |||||| ||||||||||||||||| Sbjct: 120387 cagtgcggtgtccaactgaagtca 120410
>dbj|BS000198.1| Pan troglodytes chromosome 22 clone:RP43-091A22, map 22, complete sequences Length = 181880 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tgttaaacaaggtctaaata 242 |||||||||||||||||||| Sbjct: 150285 tgttaaacaaggtctaaata 150304
>gb|AC006608.2| Caenorhabditis elegans cosmid C15F1, complete sequence Length = 37656 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 acaaggtctaaatattttta 248 |||||||||||||||||||| Sbjct: 9811 acaaggtctaaatattttta 9792
>gb|AC005385.3|AC005385 citb_10_k_1, complete sequence Length = 127203 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 atatttttaggtttgcaaac 259 |||||||||||||||||||| Sbjct: 40933 atatttttaggtttgcaaac 40952
>emb|CR385027.12| Zebrafish DNA sequence from clone DKEY-13A17 in linkage group 9, complete sequence Length = 228454 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 atgttaaacaaggtctaaat 241 |||||||||||||||||||| Sbjct: 117034 atgttaaacaaggtctaaat 117015
>gb|AC148246.3| Saimiri boliviensis boliviensis clone CH254-471K13, complete sequence Length = 177755 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 425 attggggatgatataacagaaatagcag 452 ||||| |||||||||| ||||||||||| Sbjct: 19811 attggtgatgatataagagaaatagcag 19784
>emb|CR792419.10| Zebrafish DNA sequence from clone DKEY-11A2 in linkage group 3, complete sequence Length = 61995 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 agcatctacaaaattaatca 348 |||||||||||||||||||| Sbjct: 48694 agcatctacaaaattaatca 48675 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,072,929 Number of Sequences: 3902068 Number of extensions: 7072929 Number of successful extensions: 131052 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130734 Number of HSP's gapped (non-prelim): 317 length of query: 665 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 642 effective length of database: 17,143,297,704 effective search space: 11005997125968 effective search space used: 11005997125968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)