Clone Information

BLAST Search Result

Clone Name	bags23e01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	IDHP_MEDSA (Q40345) Isocitrate dehydrogenase [NADP], chloroplast...	265	7e-71
2	IDHC_TOBAC (P50218) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42...	258	1e-68
3	IDHC_SOLTU (P50217) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42...	257	2e-68
4	IDHC_SOYBN (Q06197) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42...	252	5e-67
5	IDHP_PIG (P33198) Isocitrate dehydrogenase [NADP], mitochondrial...	224	1e-58
6	IDHP_HUMAN (P48735) Isocitrate dehydrogenase [NADP], mitochondri...	224	1e-58
7	IDHP_BOVIN (Q04467) Isocitrate dehydrogenase [NADP], mitochondri...	224	1e-58
8	IDHP_MOUSE (P54071) Isocitrate dehydrogenase [NADP], mitochondri...	217	2e-56
9	IDHP_SCHPO (O14254) Probable isocitrate dehydrogenase [NADP], mi...	214	1e-55
10	IDH2_CANTR (O13294) Isocitrate dehydrogenase [NADP] peroxisomal ...	210	2e-54
11	IDHC_YEAST (P41939) Isocitrate dehydrogenase [NADP] cytoplasmic ...	209	6e-54
12	IDH_SPHYA (P50215) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)...	207	1e-53
13	IDHP_ASPNG (P79089) Isocitrate dehydrogenase [NADP], mitochondri...	207	2e-53
14	IDHH_YEAST (P53982) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42...	207	2e-53
15	IDH_MYCTU (P65097) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)...	206	4e-53
16	IDH_MYCBO (P65098) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)...	206	4e-53
17	IDH1_CANTR (O13285) Isocitrate dehydrogenase [NADP], mitochondri...	205	6e-53
18	IDHP_YEAST (P21954) Isocitrate dehydrogenase [NADP], mitochondri...	203	2e-52
19	IDHC_MOUSE (O88844) Isocitrate dehydrogenase [NADP] cytoplasmic ...	196	4e-50
20	IDHC_HUMAN (O75874) Isocitrate dehydrogenase [NADP] cytoplasmic ...	196	4e-50
21	IDHC_RAT (P41562) Isocitrate dehydrogenase [NADP] cytoplasmic (E...	196	5e-50
22	IDHC_MICOH (Q9Z2K8) Isocitrate dehydrogenase [NADP] cytoplasmic ...	196	5e-50
23	IDHC_MICME (Q9Z2K9) Isocitrate dehydrogenase [NADP] cytoplasmic ...	196	5e-50
24	IDHC_NAEFO (P83726) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42...	36	0.087
25	POLH_MOUSE (Q9JJN0) DNA polymerase eta (EC 2.7.7.7) (RAD30 homol...	30	6.2
26	HPRK_CLOTE (Q896J4) HPr kinase/phosphorylase (EC 2.7.11.-) (EC 2...	29	8.1
27	KDGD1_STRAW (Q829P9) Probable 5-dehydro-4-deoxyglucarate dehydra...	29	8.1
28	R4RL2_RAT (Q80WD1) Reticulon-4 receptor-like 2 precursor (Nogo-6...	29	8.1
29	R4RL2_MOUSE (Q7M6Z0) Reticulon-4 receptor-like 2 precursor (Nogo...	29	8.1

>IDHP_MEDSA (Q40345) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC|
           1.1.1.42) (Oxalosuccinate decarboxylase) (IDH)
           (NADP(+)-specific ICDH) (IDP) (Fragment)
          Length = 433

 Score =  265 bits (677), Expect = 7e-71
 Identities = 123/141 (87%), Positives = 133/141 (94%)
 Frame = +1

Query: 145 TAAPMAFEKIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGD 324
           T A M F+KI+VANPIVEMDGDEMTRIIWK+IKDKLIFPF++LDIKYFDLGLP RD T D
Sbjct: 18  TTATMGFQKIKVANPIVEMDGDEMTRIIWKYIKDKLIFPFVELDIKYFDLGLPYRDETND 77

Query: 325 KVTIESAEATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIIC 504
           KVT+ESAEATLKYNVAIKCAT+TPDE RVKEF LK+MWRSPNGTIRNILNGTVFREPIIC
Sbjct: 78  KVTVESAEATLKYNVAIKCATITPDEARVKEFGLKSMWRSPNGTIRNILNGTVFREPIIC 137

Query: 505 KNVPRLVPGWTKPICIGRHAF 567
           KN+PRL+PGWTKPICIGRHAF
Sbjct: 138 KNIPRLIPGWTKPICIGRHAF 158

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>IDHC_TOBAC (P50218) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 415

 Score =  258 bits (658), Expect = 1e-68
 Identities = 120/137 (87%), Positives = 130/137 (94%)
 Frame = +1

Query: 157 MAFEKIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTI 336
           M F+KI+V NPIVEMDGDEMTR+IWK IKDKLI PFL+LDIKYFDLGLP+RDAT DKVT+
Sbjct: 1   MTFDKIKVENPIVEMDGDEMTRVIWKSIKDKLICPFLELDIKYFDLGLPHRDATDDKVTV 60

Query: 337 ESAEATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVP 516
           ESAEAT KYNVAIKCAT+TPDE RVKEFNLK+MWRSPNGTIRNILNGTVFREPI+CKN+P
Sbjct: 61  ESAEATQKYNVAIKCATITPDEARVKEFNLKSMWRSPNGTIRNILNGTVFREPIMCKNIP 120

Query: 517 RLVPGWTKPICIGRHAF 567
           RLVPGWTKPICIGRHAF
Sbjct: 121 RLVPGWTKPICIGRHAF 137

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>IDHC_SOLTU (P50217) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 416

 Score =  257 bits (656), Expect = 2e-68
 Identities = 120/137 (87%), Positives = 129/137 (94%)
 Frame = +1

Query: 157 MAFEKIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTI 336
           MAF+KI V NPIVEMDGDEMTR+IWK IKDKLI PFL+LDIKYF LGLP+RDAT DKVT+
Sbjct: 1   MAFQKITVQNPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFSLGLPHRDATDDKVTV 60

Query: 337 ESAEATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVP 516
           ESAEAT KYNVAIKCAT+TPDE RVKEFNLK+MWRSPNGTIRNILNGTVFREPI+CKN+P
Sbjct: 61  ESAEATQKYNVAIKCATITPDEARVKEFNLKSMWRSPNGTIRNILNGTVFREPIMCKNIP 120

Query: 517 RLVPGWTKPICIGRHAF 567
           RLVPGWTKPICIGRHAF
Sbjct: 121 RLVPGWTKPICIGRHAF 137

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>IDHC_SOYBN (Q06197) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 413

 Score =  252 bits (644), Expect = 5e-67
 Identities = 118/136 (86%), Positives = 128/136 (94%)
 Frame = +1

Query: 160 AFEKIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIE 339
           AF+KI+VANPIVEMDGDEMTR+IWK IKDKLI PFL+LDIKY+DLGLP RD T DKVTIE
Sbjct: 3   AFQKIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYYDLGLPYRDETDDKVTIE 62

Query: 340 SAEATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPR 519
           SAEATLKYNVAIKCAT+TPDE RVKEF LK+MW+SPNGTIRNILNGTVFREPI+CKN+PR
Sbjct: 63  SAEATLKYNVAIKCATITPDEARVKEFGLKSMWKSPNGTIRNILNGTVFREPILCKNIPR 122

Query: 520 LVPGWTKPICIGRHAF 567
           LVPGWTK ICIGRHAF
Sbjct: 123 LVPGWTKAICIGRHAF 138

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>IDHP_PIG (P33198) Isocitrate dehydrogenase [NADP], mitochondrial precursor|
           (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH)
           (NADP(+)-specific ICDH) (IDP) (ICD-M) (Fragment)
          Length = 421

 Score =  224 bits (572), Expect = 1e-58
 Identities = 103/135 (76%), Positives = 121/135 (89%)
 Frame = +1

Query: 160 AFEKIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIE 339
           A ++I+VA P+VEMDGDEMTRIIW++IK+KLI P +D+ +KYFDLGLPNRD T D+VTI+
Sbjct: 9   ADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTID 68

Query: 340 SAEATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPR 519
           SA AT KY+VA+KCAT+TPDE RV+EF LK MW+SPNGTIRNIL GTVFREPIICKN+PR
Sbjct: 69  SALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPR 128

Query: 520 LVPGWTKPICIGRHA 564
           LVPGWTKPI IGRHA
Sbjct: 129 LVPGWTKPITIGRHA 143

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>IDHP_HUMAN (P48735) Isocitrate dehydrogenase [NADP], mitochondrial precursor|
           (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH)
           (NADP(+)-specific ICDH) (IDP) (ICD-M)
          Length = 452

 Score =  224 bits (571), Expect = 1e-58
 Identities = 103/135 (76%), Positives = 121/135 (89%)
 Frame = +1

Query: 160 AFEKIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIE 339
           A ++I+VA P+VEMDGDEMTRIIW++IK+KLI P +D+ +KYFDLGLPNRD T D+VTI+
Sbjct: 40  ADKRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDIQLKYFDLGLPNRDQTDDQVTID 99

Query: 340 SAEATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPR 519
           SA AT KY+VA+KCAT+TPDE RV+EF LK MW+SPNGTIRNIL GTVFREPIICKN+PR
Sbjct: 100 SALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPR 159

Query: 520 LVPGWTKPICIGRHA 564
           LVPGWTKPI IGRHA
Sbjct: 160 LVPGWTKPITIGRHA 174

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>IDHP_BOVIN (Q04467) Isocitrate dehydrogenase [NADP], mitochondrial precursor|
           (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH)
           (NADP(+)-specific ICDH) (IDP) (ICD-M)
          Length = 452

 Score =  224 bits (571), Expect = 1e-58
 Identities = 103/135 (76%), Positives = 121/135 (89%)
 Frame = +1

Query: 160 AFEKIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIE 339
           A ++I+VA P+VEMDGDEMTRIIW++IK+KLI P +D+ +KYFDLGLPNRD T D+VTI+
Sbjct: 40  ADKRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTID 99

Query: 340 SAEATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPR 519
           SA AT KY+VA+KCAT+TPDE RV+EF LK MW+SPNGTIRNIL GTVFREPIICKN+PR
Sbjct: 100 SALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPR 159

Query: 520 LVPGWTKPICIGRHA 564
           LVPGWTKPI IGRHA
Sbjct: 160 LVPGWTKPITIGRHA 174

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>IDHP_MOUSE (P54071) Isocitrate dehydrogenase [NADP], mitochondrial precursor|
           (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH)
           (NADP(+)-specific ICDH) (IDP) (ICD-M)
          Length = 523

 Score =  217 bits (552), Expect = 2e-56
 Identities = 99/135 (73%), Positives = 118/135 (87%)
 Frame = +1

Query: 160 AFEKIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIE 339
           A ++I+V  P+VEMDGDEMTRIIW++IK+KLI P +D+ +KYFDLGLPNRD T D+VTI+
Sbjct: 112 AEKRIKVEKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTID 171

Query: 340 SAEATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPR 519
           SA A  KY++A+KCAT+TPDE RV+EF LK MW+SPNGTIRNIL GTVFREP ICKN+PR
Sbjct: 172 SALAAQKYSMAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPSICKNIPR 231

Query: 520 LVPGWTKPICIGRHA 564
           LVPGWTKPI IGRHA
Sbjct: 232 LVPGWTKPITIGRHA 246

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>IDHP_SCHPO (O14254) Probable isocitrate dehydrogenase [NADP], mitochondrial|
           precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase)
           (IDH) (NADP(+)-specific ICDH) (IDP)
          Length = 418

 Score =  214 bits (546), Expect = 1e-55
 Identities = 92/140 (65%), Positives = 120/140 (85%)
 Frame = +1

Query: 148 AAPMAFEKIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDK 327
           A+  +F+KI V NP+VEMDGDEMTR+IWK I++KL+ P++D+ + Y+DLG+  RD T D+
Sbjct: 6   ASSKSFQKITVKNPVVEMDGDEMTRVIWKIIREKLVLPYMDIKLDYYDLGIEARDKTNDQ 65

Query: 328 VTIESAEATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICK 507
           +T+++A+A LK +V IKCAT+TPDE RVKE+NLK MW+SPNGTIRNILNGTVFREPI+ K
Sbjct: 66  ITVDAAKAILKNDVGIKCATITPDEARVKEYNLKKMWKSPNGTIRNILNGTVFREPILIK 125

Query: 508 NVPRLVPGWTKPICIGRHAF 567
           N+P+ +PGWT PICIGRHAF
Sbjct: 126 NIPKYIPGWTNPICIGRHAF 145

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>IDH2_CANTR (O13294) Isocitrate dehydrogenase [NADP] peroxisomal (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (PS-NADP-IDH)
           (CtIDP2)
          Length = 410

 Score =  210 bits (535), Expect = 2e-54
 Identities = 94/134 (70%), Positives = 114/134 (85%)
 Frame = +1

Query: 166 EKIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIESA 345
           +KI V NPIVEMDGDEMTRIIW++IKDKLI P+L++D+KY+DLG+  RD T DKVT ++A
Sbjct: 4   QKITVKNPIVEMDGDEMTRIIWQFIKDKLILPYLNVDLKYYDLGIEYRDKTDDKVTTDAA 63

Query: 346 EATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPRLV 525
           EA L+Y V +KCAT+TPDE RVKEFNLK MW SPNGT+RN++ GTVFREPI+  N+PR+V
Sbjct: 64  EAILQYGVGVKCATITPDEARVKEFNLKKMWLSPNGTLRNVIGGTVFREPIVIDNIPRIV 123

Query: 526 PGWTKPICIGRHAF 567
           P W KPI IGRHAF
Sbjct: 124 PSWEKPIIIGRHAF 137

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>IDHC_YEAST (P41939) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 412

 Score =  209 bits (531), Expect = 6e-54
 Identities = 96/133 (72%), Positives = 113/133 (84%)
 Frame = +1

Query: 169 KIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIESAE 348
           KI+VANPIVEMDGDE TRIIW  I+DKL+ P+LD+D+KY+DL +  RD T D+VT++SA 
Sbjct: 3   KIKVANPIVEMDGDEQTRIIWHLIRDKLVLPYLDVDLKYYDLSVEYRDQTNDQVTVDSAT 62

Query: 349 ATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPRLVP 528
           ATLKY VA+KCAT+TPDE RV+EF+LK MW+SPNGTIRNIL GTVFREPII   +PRLVP
Sbjct: 63  ATLKYGVAVKCATITPDEARVEEFHLKKMWKSPNGTIRNILGGTVFREPIIIPRIPRLVP 122

Query: 529 GWTKPICIGRHAF 567
            W KPI IGRHAF
Sbjct: 123 QWEKPIIIGRHAF 135

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>IDH_SPHYA (P50215) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 406

 Score =  207 bits (528), Expect = 1e-53
 Identities = 90/133 (67%), Positives = 113/133 (84%)
 Frame = +1

Query: 169 KIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIESAE 348
           KI+V NP+VE+DGDEMTRIIW+WI+++LI P+LD+D+KY+DL +  RD T D++TI++A 
Sbjct: 3   KIKVKNPVVEIDGDEMTRIIWEWIRERLILPYLDVDLKYYDLSVEKRDETSDQITIDAAN 62

Query: 349 ATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPRLVP 528
           A  +Y V +KCAT+TPDE RV+EF LK MW+SPNGTIRNIL G VFREPI+ KNVPRLVP
Sbjct: 63  AIKEYGVGVKCATITPDEARVEEFGLKKMWKSPNGTIRNILGGVVFREPIVIKNVPRLVP 122

Query: 529 GWTKPICIGRHAF 567
           GWT PI +GRHAF
Sbjct: 123 GWTDPIVVGRHAF 135

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>IDHP_ASPNG (P79089) Isocitrate dehydrogenase [NADP], mitochondrial precursor|
           (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH)
           (NADP(+)-specific ICDH) (IDP)
          Length = 498

 Score =  207 bits (526), Expect = 2e-53
 Identities = 101/159 (63%), Positives = 119/159 (74%), Gaps = 2/159 (1%)
 Frame = +1

Query: 97  RLASXXXXXXXXXXXXTAAPMAFE--KIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLD 270
           R AS             +  MA E  KI+V NP+VE+DGDEMTRIIW+ I++KLI P+LD
Sbjct: 66  RTASARWTGLSSLNLTQSRTMATEIPKIKVKNPVVELDGDEMTRIIWQEIREKLILPYLD 125

Query: 271 LDIKYFDLGLPNRDATGDKVTIESAEATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPN 450
           +D+KY+DLGL  RD T D+VT+E+AEA  KY V +KCAT+TPDE RV+EF LK MW SPN
Sbjct: 126 VDLKYYDLGLEYRDQTDDQVTVEAAEAIKKYGVGVKCATITPDEARVEEFKLKKMWLSPN 185

Query: 451 GTIRNILNGTVFREPIICKNVPRLVPGWTKPICIGRHAF 567
           GTIRNIL GTVFREPII   +PRLVPGW KPI IGRHAF
Sbjct: 186 GTIRNILGGTVFREPIIIPAIPRLVPGWNKPIIIGRHAF 224

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>IDHH_YEAST (P53982) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 420

 Score =  207 bits (526), Expect = 2e-53
 Identities = 95/133 (71%), Positives = 112/133 (84%)
 Frame = +1

Query: 169 KIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIESAE 348
           KI+V +PIVEMDGDE TR+IWK IK+KLI P+LD+D+KY+DL +  RD T D+VT +S+ 
Sbjct: 3   KIKVVHPIVEMDGDEQTRVIWKLIKEKLILPYLDVDLKYYDLSIQERDRTNDQVTKDSSY 62

Query: 349 ATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPRLVP 528
           ATLKY VA+KCAT+TPDE R+KEFNLK MW+SPNGTIRNIL GTVFREPII   +PRLVP
Sbjct: 63  ATLKYGVAVKCATITPDEARMKEFNLKEMWKSPNGTIRNILGGTVFREPIIIPKIPRLVP 122

Query: 529 GWTKPICIGRHAF 567
            W KPI IGRHAF
Sbjct: 123 HWEKPIIIGRHAF 135

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>IDH_MYCTU (P65097) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 409

 Score =  206 bits (524), Expect = 4e-53
 Identities = 93/133 (69%), Positives = 113/133 (84%)
 Frame = +1

Query: 169 KIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIESAE 348
           KI+V+ P+VE+DGDEMTR+IWK IKD LI P+LD+ + Y+DLG+ +RDAT D+VTI++A 
Sbjct: 6   KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAY 65

Query: 349 ATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPRLVP 528
           A  K+ V +KCAT+TPDE RV+EFNLK MW SPNGTIRNIL GT+FREPI+  NVPRLVP
Sbjct: 66  AIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVP 125

Query: 529 GWTKPICIGRHAF 567
           GWTKPI IGRHAF
Sbjct: 126 GWTKPIVIGRHAF 138

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>IDH_MYCBO (P65098) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 409

 Score =  206 bits (524), Expect = 4e-53
 Identities = 93/133 (69%), Positives = 113/133 (84%)
 Frame = +1

Query: 169 KIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIESAE 348
           KI+V+ P+VE+DGDEMTR+IWK IKD LI P+LD+ + Y+DLG+ +RDAT D+VTI++A 
Sbjct: 6   KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAY 65

Query: 349 ATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPRLVP 528
           A  K+ V +KCAT+TPDE RV+EFNLK MW SPNGTIRNIL GT+FREPI+  NVPRLVP
Sbjct: 66  AIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVP 125

Query: 529 GWTKPICIGRHAF 567
           GWTKPI IGRHAF
Sbjct: 126 GWTKPIVIGRHAF 138

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>IDH1_CANTR (O13285) Isocitrate dehydrogenase [NADP], mitochondrial precursor|
           (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH)
           (NADP(+)-specific ICDH) (IDP) (CtIDP1)
          Length = 430

 Score =  205 bits (522), Expect = 6e-53
 Identities = 96/141 (68%), Positives = 119/141 (84%)
 Frame = +1

Query: 145 TAAPMAFEKIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGD 324
           T+A +A +KI+V NPIVE+DGDEMTRIIW+ IKD+LI P+LD+D+KY+DLG+ +RDAT D
Sbjct: 22  TSATLA-DKIKVKNPIVELDGDEMTRIIWQKIKDQLILPYLDVDLKYYDLGIESRDATDD 80

Query: 325 KVTIESAEATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIIC 504
           ++TI++A A  +Y V +KCAT+TPDE RVKEF+LK MW SPNGTIRNIL GTVFRE II 
Sbjct: 81  QITIDAANAIKEYGVGVKCATITPDEARVKEFHLKKMWLSPNGTIRNILGGTVFRESIII 140

Query: 505 KNVPRLVPGWTKPICIGRHAF 567
             +PRL+PGW KPI IGRHAF
Sbjct: 141 PCIPRLIPGWEKPIVIGRHAF 161

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>IDHP_YEAST (P21954) Isocitrate dehydrogenase [NADP], mitochondrial precursor|
           (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH)
           (NADP(+)-specific ICDH) (IDP)
          Length = 428

 Score =  203 bits (517), Expect = 2e-52
 Identities = 95/140 (67%), Positives = 112/140 (80%)
 Frame = +1

Query: 145 TAAPMAFEKIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGD 324
           T+   AF KI+V  P+VE+DGDEMTRIIW  IK KLI P+LD+D+KY+DL + +RDAT D
Sbjct: 11  TSRLAAFSKIKVKQPVVELDGDEMTRIIWDKIKKKLILPYLDVDLKYYDLSVESRDATSD 70

Query: 325 KVTIESAEATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIIC 504
           K+T ++AEA  KY V IKCAT+TPDE RVKEFNL  MW+SPNGTIRNIL GTVFREPI+ 
Sbjct: 71  KITQDAAEAIKKYGVGIKCATITPDEARVKEFNLHKMWKSPNGTIRNILGGTVFREPIVI 130

Query: 505 KNVPRLVPGWTKPICIGRHA 564
             +PRLVP W KPI IGRHA
Sbjct: 131 PRIPRLVPRWEKPIIIGRHA 150

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>IDHC_MOUSE (O88844) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 414

 Score =  196 bits (498), Expect = 4e-50
 Identities = 92/133 (69%), Positives = 110/133 (82%)
 Frame = +1

Query: 169 KIQVANPIVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIESAE 348
           KIQ    +VEM GDEMTRIIW+ IK+KLI P+++LD+  +DLG+ NRDAT D+VT ++AE
Sbjct: 4   KIQ-GGSVVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAE 62

Query: 349 ATLKYNVAIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPRLVP 528
           A  KYNV +KCAT+TPDE RV+EF LK MW+SPNGTIRNIL GTVFRE IICKN+PRLV 
Sbjct: 63  AIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVT 122

Query: 529 GWTKPICIGRHAF 567
           GW KPI IGRHA+
Sbjct: 123 GWVKPIIIGRHAY 135

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>IDHC_HUMAN (O75874) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 414

 Score =  196 bits (498), Expect = 4e-50
 Identities = 89/126 (70%), Positives = 108/126 (85%)
 Frame = +1

Query: 190 IVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIESAEATLKYNV 369
           +VEM GDEMTRIIW+ IK+KLIFP+++LD+  +DLG+ NRDAT D+VT ++AEA  K+NV
Sbjct: 10  VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNV 69

Query: 370 AIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPRLVPGWTKPIC 549
            +KCAT+TPDE RV+EF LK MW+SPNGTIRNIL GTVFRE IICKN+PRLV GW KPI 
Sbjct: 70  GVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPII 129

Query: 550 IGRHAF 567
           IGRHA+
Sbjct: 130 IGRHAY 135

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>IDHC_RAT (P41562) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 414

 Score =  196 bits (497), Expect = 5e-50
 Identities = 89/126 (70%), Positives = 107/126 (84%)
 Frame = +1

Query: 190 IVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIESAEATLKYNV 369
           +VEM GDEMTRIIW+ IK+KLI P+++LD+  +DLG+ NRDAT D+VT ++AEA  KYNV
Sbjct: 10  VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNV 69

Query: 370 AIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPRLVPGWTKPIC 549
            +KCAT+TPDE RV+EF LK MW+SPNGTIRNIL GTVFRE IICKN+PRLV GW KPI 
Sbjct: 70  GVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPII 129

Query: 550 IGRHAF 567
           IGRHA+
Sbjct: 130 IGRHAY 135

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>IDHC_MICOH (Q9Z2K8) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 414

 Score =  196 bits (497), Expect = 5e-50
 Identities = 89/126 (70%), Positives = 107/126 (84%)
 Frame = +1

Query: 190 IVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIESAEATLKYNV 369
           +VEM GDEMTRIIW+ IK+KLI P+++LD+  +DLG+ NRDAT D+VT ++AEA  KYNV
Sbjct: 10  VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNV 69

Query: 370 AIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPRLVPGWTKPIC 549
            +KCAT+TPDE RV+EF LK MW+SPNGTIRNIL GTVFRE IICKN+PRLV GW KPI 
Sbjct: 70  GVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPII 129

Query: 550 IGRHAF 567
           IGRHA+
Sbjct: 130 IGRHAY 135

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>IDHC_MICME (Q9Z2K9) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 414

 Score =  196 bits (497), Expect = 5e-50
 Identities = 89/126 (70%), Positives = 107/126 (84%)
 Frame = +1

Query: 190 IVEMDGDEMTRIIWKWIKDKLIFPFLDLDIKYFDLGLPNRDATGDKVTIESAEATLKYNV 369
           +VEM GDEMTRIIW+ IK+KLI P+++LD+  +DLG+ NRDAT D+VT ++AEA  KYNV
Sbjct: 10  VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNV 69

Query: 370 AIKCATVTPDEGRVKEFNLKAMWRSPNGTIRNILNGTVFREPIICKNVPRLVPGWTKPIC 549
            +KCAT+TPDE RV+EF LK MW+SPNGTIRNIL GTVFRE IICKN+PRLV GW KPI 
Sbjct: 70  GVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPII 129

Query: 550 IGRHAF 567
           IGRHA+
Sbjct: 130 IGRHAY 135

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>IDHC_NAEFO (P83726) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP) (NF033) (Fragment)
          Length = 20

 Score = 35.8 bits (81), Expect = 0.087
 Identities = 14/18 (77%), Positives = 18/18 (100%)
 Frame = +1

Query: 163 FEKIQVANPIVEMDGDEM 216
           F+KI+VANP+VE+DGDEM
Sbjct: 3   FQKIKVANPVVELDGDEM 20

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>POLH_MOUSE (Q9JJN0) DNA polymerase eta (EC 2.7.7.7) (RAD30 homolog A)|
           (Xeroderma pigmentosum variant type protein homolog)
          Length = 694

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
 Frame = +1

Query: 376 KCATVTPDEGRVKEFNLKAMWRSPN--GTIRNILNGTVFR----------EPIICKNVPR 519
           +C    PD+G VK  + KA+    N  G   N+L+   +           + ++C+    
Sbjct: 562 ECVDSGPDDGAVKPVSSKAVSTEMNVAGDSPNVLDSPAYNSQEVTQRATEDQVLCEKCDS 621

Query: 520 LVPGWTKP 543
           LVP W  P
Sbjct: 622 LVPVWDMP 629

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>HPRK_CLOTE (Q896J4) HPr kinase/phosphorylase (EC 2.7.11.-) (EC 2.7.4.-)|
           (HPrK/P) (HPr(Ser) kinase/phosphorylase)
          Length = 305

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +1

Query: 271 LDIKYFDLGLPNRDATGDKVTIESAEATLKYNVAIKCATVTPDEGRVKEFNLK 429
           L++    + LP R      V IE+A A  +YN+    + V     R+KE NLK
Sbjct: 251 LNVPVRKITLPIRPGRNIAVIIEAAAANYRYNLNSNSSPVDTIGARMKEENLK 303

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>KDGD1_STRAW (Q829P9) Probable 5-dehydro-4-deoxyglucarate dehydratase 1 (EC|
           4.2.1.41) (5-keto-4-deoxy-glucarate dehydratase 1)
           (KDGDH 1)
          Length = 313

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 210 ITVHLDDGVGNLDLLERHGRRGPLAGQLAFF 118
           +T +  DG  NLD+   H RRG  AG  A F
Sbjct: 21  VTAYRPDGALNLDVYREHVRRGVEAGAAAVF 51

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>R4RL2_RAT (Q80WD1) Reticulon-4 receptor-like 2 precursor (Nogo-66 receptor|
           homolog 1) (Nogo-66 receptor-related protein 2) (NgR2)
           (Nogo receptor-like 3)
          Length = 420

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 225 NSCHLITVHLDDGVGNLDLLERHGRRGPLAGQLAFFGTRR 106
           N   L+T H+  G+G+LD L  HG R     + AF G  R
Sbjct: 189 NRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSR 228

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>R4RL2_MOUSE (Q7M6Z0) Reticulon-4 receptor-like 2 precursor (Nogo-66 receptor|
           homolog 1) (Nogo-66 receptor-related protein 2) (NgR2)
           (Nogo receptor-like 3)
          Length = 420

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 225 NSCHLITVHLDDGVGNLDLLERHGRRGPLAGQLAFFGTRR 106
           N   L+T H+  G+G+LD L  HG R     + AF G  R
Sbjct: 189 NRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSR 228


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,889,162
Number of Sequences: 219361
Number of extensions: 1601978
Number of successful extensions: 4627
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4626
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result