ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags22o20 |
|---|---|
| Clone Library Name | barley_pub |
>BT3L4_MOUSE (Q9CQH7) Transcription factor BTF3 homolog 4 (Basic transcription| factor 3-like 4) Length = 158 Score = 125 bits (313), Expect = 5e-29 Identities = 61/103 (59%), Positives = 81/103 (78%), Gaps = 1/103 (0%) Frame = +3 Query: 3 RRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFLNPKVQASIGAN 179 RRKKK VH+T T DDK+LQS+LK++ VN I GIEEVN+ KDD VI F NPKVQAS+ AN Sbjct: 22 RRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSAN 81 Query: 180 TWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQV 308 T+ ++G + K + ++LP I++QLG D+L +LR+LAEQF +QV Sbjct: 82 TFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQV 124
>BT3L4_HUMAN (Q96K17) Transcription factor BTF3 homolog 4 (Basic transcription| factor 3-like 4) Length = 158 Score = 125 bits (313), Expect = 5e-29 Identities = 61/103 (59%), Positives = 81/103 (78%), Gaps = 1/103 (0%) Frame = +3 Query: 3 RRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFLNPKVQASIGAN 179 RRKKK VH+T T DDK+LQS+LK++ VN I GIEEVN+ KDD VI F NPKVQAS+ AN Sbjct: 22 RRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSAN 81 Query: 180 TWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQV 308 T+ ++G + K + ++LP I++QLG D+L +LR+LAEQF +QV Sbjct: 82 TFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQV 124
>BTF3_HUMAN (P20290) Transcription factor BTF3 (RNA polymerase B transcription| factor 3) Length = 206 Score = 124 bits (310), Expect = 1e-28 Identities = 62/102 (60%), Positives = 80/102 (78%), Gaps = 1/102 (0%) Frame = +3 Query: 3 RRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFLNPKVQASIGAN 179 RRKKK VH+T T DDK+LQ +LK++GVN I GIEEVN+F + VI F NPKVQAS+ AN Sbjct: 71 RRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAAN 130 Query: 180 TWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQ 305 T+ ++G +TK+L ++LPSI+NQLG D+L +LRRLAE KQ Sbjct: 131 TFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQ 172
>BTF3_MOUSE (Q64152) Transcription factor BTF3 (RNA polymerase B transcription| factor 3) Length = 204 Score = 124 bits (310), Expect = 1e-28 Identities = 62/102 (60%), Positives = 80/102 (78%), Gaps = 1/102 (0%) Frame = +3 Query: 3 RRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFLNPKVQASIGAN 179 RRKKK VH+T T DDK+LQ +LK++GVN I GIEEVN+F + VI F NPKVQAS+ AN Sbjct: 69 RRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAAN 128 Query: 180 TWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQ 305 T+ ++G +TK+L ++LPSI+NQLG D+L +LRRLAE KQ Sbjct: 129 TFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQ 170
>BTF3_CAEEL (Q18885) Transcription factor BTF3 homolog (Inhibitor of cell death| 1) Length = 161 Score = 117 bits (293), Expect = 1e-26 Identities = 57/104 (54%), Positives = 76/104 (73%), Gaps = 1/104 (0%) Frame = +3 Query: 3 RRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFLNPKVQASIGAN 179 RRKKK +HKT DDK+LQS LK++ V IPGIEEVN+ KDD VI F NPKVQ S+ AN Sbjct: 29 RRKKKVIHKTAAADDKKLQSNLKKLSVTNIPGIEEVNMIKDDGTVIHFNNPKVQTSVPAN 88 Query: 180 TWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQVP 311 T+ V+G+ K++ ++LP I+NQLGP++L +L++LA K P Sbjct: 89 TFSVTGSADNKQITEMLPGILNQLGPESLTHLKKLANNVTKLGP 132
>BT3L3_HUMAN (Q13892) Transcription factor BTF3 homolog 3 (Basic transcription| factor 3-like 3) Length = 214 Score = 106 bits (264), Expect = 2e-23 Identities = 52/101 (51%), Positives = 74/101 (73%), Gaps = 1/101 (0%) Frame = +3 Query: 6 RKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFLNPKVQASIGANT 182 RKKK H+T T DDK+LQ +LK++ VN I GIE+VN+F + VI F NPK QAS+ NT Sbjct: 58 RKKKVFHRTATADDKKLQFSLKKLQVNNISGIEKVNMFTNQGTVIHFNNPKFQASLAVNT 117 Query: 183 WVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQ 305 + ++G + K++ ++LPS+++QLG D+L +LRRLAE KQ Sbjct: 118 FTITGHAEAKQVTEMLPSVLSQLGADSLTSLRRLAEVLPKQ 158
>BT3L1_HUMAN (Q13890) Transcription factor BTF3 homolog 1 (Basic transcription| factor 3-like 1) Length = 111 Score = 80.1 bits (196), Expect = 2e-15 Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 1/78 (1%) Frame = +3 Query: 9 KKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIF-KDDVVIQFLNPKVQASIGANTW 185 +KK VH TT +DK+ Q +LK++GVN IPGIEEVN+F VI F NP+VQAS+ ANT+ Sbjct: 27 RKKVVH--TTAEDKKFQFSLKKLGVNNIPGIEEVNMFTHQGTVIHFNNPEVQASLAANTF 84 Query: 186 VVSGTPQTKKLQDLLPSI 239 ++G +TK+L ++L SI Sbjct: 85 TMTGHAETKQLTEMLLSI 102
>BTF3_SCHPO (Q92371) Transcription factor BTF3 homolog| Length = 151 Score = 79.3 bits (194), Expect = 3e-15 Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 3/102 (2%) Frame = +3 Query: 3 RRKKKAVHKT--TTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDDV-VIQFLNPKVQASIG 173 RRK K K+ + DDK++Q LK++ + + GI+EVN+FK+D VI F P V +S+ Sbjct: 22 RRKVKKPSKSAMSAADDKKVQGALKKLNMQNLAGIQEVNMFKEDGGVINFRAPTVHSSLP 81 Query: 174 ANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQ 299 T + G + K L ++LP I+N LGP++L LR++AEQ + Sbjct: 82 NETTAIYGKAEEKTLSEILPGILNNLGPESLTALRQMAEQLK 123
>EGD1_YEAST (Q02642) BTF3 homolog EGD1 (GAL4 DNA-binding enhancer protein 1)| Length = 157 Score = 77.4 bits (189), Expect = 1e-14 Identities = 50/135 (37%), Positives = 64/135 (47%), Gaps = 1/135 (0%) Frame = +3 Query: 9 KKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFLNPKVQASIGANTW 185 KK DD +LQS L ++ TI + E N FKDD V+ F VQ + NT Sbjct: 29 KKAGSSAGANKDDTKLQSQLAKLHAVTIDNVAEANFFKDDGKVMHFNKVGVQVAAQHNTS 88 Query: 186 VVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQVPXXXXXXXXXXXXXXXXXX 365 V G PQ K LQDL P II+QLGP+ + L +LA Q +K Sbjct: 89 VFYGLPQEKNLQDLFPGIISQLGPEAIQALSQLAAQMEKH----------EAKAPADAEK 138 Query: 366 XXXXVPELVPGETFE 410 +PELV G+TF+ Sbjct: 139 KDEAIPELVEGQTFD 153
>BTT1_YEAST (P40314) BTF3 homolog BTT1| Length = 149 Score = 51.2 bits (121), Expect = 9e-07 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 1/100 (1%) Frame = +3 Query: 9 KKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFLNPKVQASIGANTW 185 KK ++ D+ +LQ+ L ++ TI + E N FK + V+ F + VQ + N Sbjct: 29 KKGNLYNNNDKDNTKLQAELHKLHPMTIENVAEANFFKKNGKVLHFNSAVVQIAPQCNLT 88 Query: 186 VVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLAEQFQKQ 305 ++ G P+ L L PS+ +QLG L+ L LA + + Sbjct: 89 MIHGQPKENTLNGLYPSVASQLGSQELEYLTGLAHNLENE 128
>BT3L2_HUMAN (Q13891) Transcription factor BTF3 homolog 2 (Basic transcription| factor 3-like 2) Length = 67 Score = 40.0 bits (92), Expect = 0.002 Identities = 19/43 (44%), Positives = 29/43 (67%) Frame = +3 Query: 9 KKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDDVVI 137 +KK VH+T T +DK+ Q +LK++ I GIEEVN+F + + Sbjct: 26 RKKVVHRTATANDKKRQFSLKKL---EISGIEEVNMFTNQATV 65
>KAD2_SYNY3 (P72641) Probable adenylate kinase 2 (EC 2.7.4.3) (ATP-AMP| transphosphorylase 2) Length = 181 Score = 34.7 bits (78), Expect = 0.089 Identities = 14/60 (23%), Positives = 31/60 (51%) Frame = +3 Query: 75 VGVNTIPGIEEVNIFKDDVVIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIINQLG 254 +G+ P +E ++ D ++I+F+ ++ G W++ G P+T + L ++ LG Sbjct: 45 LGIKAKPYVERGDLLPDPMMIEFIQQRLVQEDGGQGWILEGYPRTAFQAEELDFLLEDLG 104
>ERG27_KLULA (Q6CJC2) 3-keto-steroid reductase (EC 1.1.1.270)| Length = 346 Score = 32.3 bits (72), Expect = 0.44 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%) Frame = +3 Query: 66 LKRVGVNTIPG---IEEVNIFKDDVVIQFLNPKVQASIGANTWV--VSGTPQTKKLQD-- 224 ++RVGV + G + + N+F +IQ L P +QA G WV + P+ LQD Sbjct: 134 IQRVGVKSKDGMGLVFQANVFGPYYLIQKLLPLLQAGQGTVVWVSSIMSAPKYLSLQDIQ 193 Query: 225 LLPSIINQLGPDNLDNL 275 LL S ++ G L +L Sbjct: 194 LLESDVSYEGSKRLVDL 210
>POL_BLVJ (P03361) Pol polyprotein [Contains: Reverse| transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] Length = 852 Score = 30.8 bits (68), Expect = 1.3 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 13/76 (17%) Frame = +3 Query: 102 EEVNIFKDDVVIQFLNP----KVQASIGANTWVVSGTPQTKKLQDLL---------PSII 242 E++ ++ +Q +P ++QA +G WV GTP T++ LL P I Sbjct: 214 EQIVTYQSLPTLQISSPISLHQLQAVLGDLQWVSRGTPTTRRPLQLLYSSLKRHHDPRAI 273 Query: 243 NQLGPDNLDNLRRLAE 290 QL P+ L + L + Sbjct: 274 IQLSPEQLQGIAELRQ 289
>KAD2_ANASP (Q8Z0M3) Probable adenylate kinase 2 (EC 2.7.4.3) (ATP-AMP| transphosphorylase 2) Length = 184 Score = 30.4 bits (67), Expect = 1.7 Identities = 15/65 (23%), Positives = 36/65 (55%) Frame = +3 Query: 60 STLKRVGVNTIPGIEEVNIFKDDVVIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSI 239 S L +G + P + + + D+++I+ + +++ S + WV+ G P+T + L + Sbjct: 40 SHLSELGRHAQPYMIKGELVPDEMIIELIRLRLKKSDVIDGWVLEGYPRTAFQAEELDFL 99 Query: 240 INQLG 254 +++LG Sbjct: 100 LDELG 104
>CITG_KLEPN (P45414) 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase| (EC 2.7.8.25) (2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase) Length = 302 Score = 29.6 bits (65), Expect = 2.9 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = +3 Query: 57 QSTLKRVGVNTIPGIEEVNIFKDDVVIQFLNPKVQASIGANTWVVSGTP 203 Q L + GV G+E + F D+++ + L+P A + A TW +S P Sbjct: 247 QRLLWQGGVLADGGLEALRQFDDELIARHLSPGGSADLLAVTWFLSAFP 295
>EST1_YEAST (P17214) Telomere elongation protein EST1 (EC 2.7.7.-) (Ever| shorter telomeres protein 1) Length = 699 Score = 29.3 bits (64), Expect = 3.7 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = -2 Query: 208 VCGVPLTTHVLAPIEACTLGFRN*ITTSSLKMLTSSIPGMVFTPTLFR 65 + G P T VL+P E C L R+ I S +K L + G+++ + ++ Sbjct: 526 IIGCPTLTKVLSPKEECVLRIRS-IIFSGMKFLEKNDTGVIWNASKYK 572
>TRXR_CAEEL (Q17745) Thioredoxin reductase (EC 1.8.1.9) (TR-Se) (TRR)| Length = 667 Score = 29.3 bits (64), Expect = 3.7 Identities = 21/57 (36%), Positives = 28/57 (49%) Frame = +3 Query: 9 KKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDDVVIQFLNPKVQASIGAN 179 KKK V K T D+ L ST R IPG++E I DD+ +P +GA+ Sbjct: 306 KKKKVEKLTA--DRFLISTGLRPKYPEIPGVKEYTITSDDLFQLPYSPGKTLCVGAS 360
>DLG1_HUMAN (Q12959) Disks large homolog 1 (Synapse-associated protein 97)| (SAP-97) (hDlg) Length = 904 Score = 28.5 bits (62), Expect = 6.4 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 14/87 (16%) Frame = +3 Query: 27 KTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDDVVIQFL-------NPKV-------QA 164 K + T+D++L+S+++RV +N I + N+F+ + IQ NPK + Sbjct: 21 KLSQTEDRQLRSSIERV-IN----IFQSNLFQALIDIQEFYEVTLLDNPKCIDRSKPSEP 75 Query: 165 SIGANTWVVSGTPQTKKLQDLLPSIIN 245 NTW +S P + + LPS ++ Sbjct: 76 IQPVNTWEISSLPSSTVTSETLPSSLS 102
>ARGJ_STRT2 (Q5M5L0) Arginine biosynthesis bifunctional protein argJ [Includes:| Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (Ornithine transacetylase) (OATase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate syn Length = 397 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = -1 Query: 389 KLRDIIIVVSLSSTCTGT-SLDASGTTRDLLLELLCKPPEVVQVVRTKLI 243 K+R I++ ++++CTGT L+ + T ++ E L P+++ V T +I Sbjct: 67 KMRAIVVNSGVANSCTGTQGLEDAYTMQEWTAEKLGVEPDMIGVASTGII 116
>ARGJ_STRT1 (Q5M122) Arginine biosynthesis bifunctional protein argJ [Includes:| Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (Ornithine transacetylase) (OATase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate syn Length = 397 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = -1 Query: 389 KLRDIIIVVSLSSTCTGT-SLDASGTTRDLLLELLCKPPEVVQVVRTKLI 243 K+R I++ ++++CTGT L+ + T ++ E L P+++ V T +I Sbjct: 67 KMRAIVVNSGVANSCTGTQGLEDAYTMQEWTAEKLGVEPDMIGVASTGII 116
>ATPG_HELHP (Q7VJ22) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 297 Score = 28.1 bits (61), Expect = 8.3 Identities = 17/59 (28%), Positives = 27/59 (45%) Frame = +3 Query: 69 KRVGVNTIPGIEEVNIFKDDVVIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIIN 245 K +G++ P E+ F ++VV FLN I + + Q + Q +LP IN Sbjct: 145 KAIGLSAAPTFEKAEAFIENVVEDFLNGATDEVIIVHNGFKNMISQELESQAILPLTIN 203
>FLIC_SERMA (P13713) Flagellin| Length = 351 Score = 28.1 bits (61), Expect = 8.3 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +3 Query: 108 VNIFKDDVVIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIINQLGPDNLDNLRRLA 287 +N KDD Q ++ + A+I T L +N++ DNL N+RRL Sbjct: 38 INSAKDDAAGQAISNRFTANIKGLTQASRNANDGISLAQTTEGALNEVN-DNLQNIRRLT 96 Query: 288 EQFQ 299 Q Q Sbjct: 97 VQAQ 100 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,777,733 Number of Sequences: 219361 Number of extensions: 1069636 Number of successful extensions: 3387 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3315 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3376 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
