ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags23d15 |
|---|---|
| Clone Library Name | barley_pub |
>AMPN_ECOLI (P04825) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide| hydrolase) Length = 869 Score = 130 bits (328), Expect = 3e-30 Identities = 73/213 (34%), Positives = 116/213 (54%) Frame = +3 Query: 12 KXGTPTVKATSSYDEGSQTFSLKLSQEVPPTPGQPMKEPMFIPVAVGLVDSTGEDMPLTS 191 + GTP V Y+ ++ ++L +SQ P TP Q K+P+ IP A+ L D+ G+ +PL Sbjct: 441 QSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPL-- 498 Query: 192 IYSDGMVQTLSNDGHPVFTTVLQFKKTEEEFIFNNVPERPVPSLLRGYSAPIRLDSDLTE 371 GHPV +VL + E+ F+F+NV +PVP+LL +SAP++L+ ++ Sbjct: 499 ----------QKGGHPV-NSVLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSD 547 Query: 372 SDLYFLLANDSDEFNRWEAGQILARKLMFSLVADFQQQKTLALNTKFVDGLRAILRSTSL 551 L FL+ + ++F+RW+A Q L + VA QQ + L+L D RA+L + Sbjct: 548 QQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKI 607 Query: 552 DKEFIAKAITLPGQGEIMDMMSIADPDAVHAVR 650 D A+ +TLP E+ ++ I DP A+ VR Sbjct: 608 DPALAAEILTLPSVNEMAELFDIIDPIAIAEVR 640
>AMPN_CAUCR (P37893) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide| hydrolase) Length = 863 Score = 123 bits (308), Expect = 5e-28 Identities = 72/213 (33%), Positives = 111/213 (52%) Frame = +3 Query: 12 KXGTPTVKATSSYDEGSQTFSLKLSQEVPPTPGQPMKEPMFIPVAVGLVDSTGEDMPLTS 191 + GTP+V ++YD + +L L+Q PTPGQP K+P+ IP+A+GL+ + G Sbjct: 444 QAGTPSVTIETAYDAAAGALTLTLTQSTSPTPGQPDKKPLPIPIAIGLLAADGR------ 497 Query: 192 IYSDGMVQTLSNDGHPVFTTVLQFKKTEEEFIFNNVPERPVPSLLRGYSAPIRLDSDLTE 371 + D T ++ + + ++++PE PV S LRG+SAP+ L +D Sbjct: 498 VLRD--------------TEIVLLDQAQMTVRWDSIPEPPVLSALRGFSAPVNLSTDARP 543 Query: 372 SDLYFLLANDSDEFNRWEAGQILARKLMFSLVADFQQQKTLALNTKFVDGLRAILRSTSL 551 SD Y L +D+D FNRWEAGQ LAR L+ + A + ++ D L L + Sbjct: 544 SDRYVLFGSDTDLFNRWEAGQTLARDLILTRAAGAPDE---VGEERYADALGRALVDDAA 600 Query: 552 DKEFIAKAITLPGQGEIMDMMSIADPDAVHAVR 650 + F A + LP + ++ M ADP A+HA R Sbjct: 601 EPAFKALLLALPSEPDLALMFEAADPAALHAAR 633
>AMPN_HAEIN (P45274) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide| hydrolase) Length = 869 Score = 108 bits (271), Expect = 1e-23 Identities = 66/213 (30%), Positives = 106/213 (49%) Frame = +3 Query: 12 KXGTPTVKATSSYDEGSQTFSLKLSQEVPPTPGQPMKEPMFIPVAVGLVDSTGEDMPLTS 191 + GTP + + +YDE + T+ L +SQ PPT Q K + IP+ V L D+ G Sbjct: 443 QSGTPELLISDAYDEKTHTYRLTVSQSTPPTADQMEKVNLHIPLKVALYDANGTK----- 497 Query: 192 IYSDGMVQTLSNDGHPVFTTVLQFKKTEEEFIFNNVPERPVPSLLRGYSAPIRLDSDLTE 371 Q L ++G + + VL + ++ F F+ + RP+P+LL +SAP++LD D Sbjct: 498 -------QMLQHNGE-LLSDVLNVTEKDQVFEFHGIYGRPIPALLCDFSAPVKLDYDYKT 549 Query: 372 SDLYFLLANDSDEFNRWEAGQILARKLMFSLVADFQQQKTLALNTKFVDGLRAILRSTSL 551 L LL ++F RW+A Q+L + + V FQQ + L ++ + + L +L Sbjct: 550 EQLLGLLKFADNQFIRWDAAQMLFAQELRRNVVRFQQGEALEISPEILTALSYVLNHYEK 609 Query: 552 DKEFIAKAITLPGQGEIMDMMSIADPDAVHAVR 650 D E +TLP + E + DPD + A R Sbjct: 610 DIELATLILTLPKEMEFAESFKTIDPDGISAAR 642
>AMP1_PLAFQ (O96935) M1-family aminopeptidase (EC 3.4.11.-) (Pfa-M1)| Length = 1085 Score = 103 bits (256), Expect = 6e-22 Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 9/218 (4%) Frame = +3 Query: 12 KXGTPTVKATSSYDEGSQTFSLKLSQEVPPTPGQPMKEPMFIPVAVGLVD-STGEDMPLT 188 + GTP V +YD + +S+ ++Q P Q K+P+FIP++VGL++ G++M Sbjct: 648 QSGTPHVSFKYNYDAEKKQYSIHVNQYTKPDENQKEKKPLFIPISVGLINPENGKEM--- 704 Query: 189 SIYSDGMVQTLSNDGHPVFTTVLQFKKTEEEFIFNNVPERPVPSLLRGYSAPIRLDSDLT 368 + T L+ K + F+FNN+ +P+PSL RG+SAP+ ++ +LT Sbjct: 705 -----------------ISQTTLELTKESDTFVFNNIAVKPIPSLFRGFSAPVYIEDNLT 747 Query: 369 ESDLYFLLANDSDEFNRWEAGQILARKLMFSLVADFQQQKTLAL--------NTKFVDGL 524 + + LL DSD F R+ + + K + +F + K L N +F+D + Sbjct: 748 DEERILLLKYDSDAFVRYNSCTNIYMKQILMNYNEFLKAKNEKLESFNLTPVNAQFIDAI 807 Query: 525 RAILRSTSLDKEFIAKAITLPGQGEIMDMMSIADPDAV 638 + +L D F + ++LP I++ +S D D + Sbjct: 808 KYLLEDPHADAGFKSYIVSLPQDRYIINFVSNLDTDVL 845
>MYBPH_CHICK (Q05623) Myosin-binding protein H (MyBP-H) (H-protein) (86 kDa| protein) Length = 537 Score = 33.5 bits (75), Expect = 0.56 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 8/86 (9%) Frame = +3 Query: 21 TPTVKATSSYDEGSQTFSLKLSQEVPPTPGQPMKEPMFIPVAVGLVDSTGEDMPLT---- 188 TPT +A +++EG + + P P +P +EP +P+++ + + T + LT Sbjct: 99 TPTHEAAPAHEEGPPPAAPAEAPAPEPEPEKPKEEPPSVPLSLAVEEVTENSVTLTWKAP 158 Query: 189 ----SIYSDGMVQTLSNDGHPVFTTV 254 DG V + DG +T V Sbjct: 159 EHTGKSSLDGYVVEICKDGSTDWTAV 184
>TRI66_HUMAN (O15016) Tripartite motif protein 66| Length = 1214 Score = 32.7 bits (73), Expect = 0.96 Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 21/134 (15%) Frame = +3 Query: 30 VKATSSYDEGSQTFSLKLSQEVPPTPGQPMKEPMFIPVAVGLVDSTGEDMPLTSIYSDGM 209 V+ + SQ +L+ + E P + G P+ A L ++GE+ PL+ D Sbjct: 553 VRQPAPVQSQSQEETLQATDEPPASQGSKPALPLDKNTAAALPQASGEETPLSVPPVDST 612 Query: 210 VQTLSND---GHPVFTTVLQFKKTEEEFIFNNVPERP------------------VPSLL 326 +Q S + H +++ F T E + + ERP VPSLL Sbjct: 613 IQHSSPNVVRKHSTSLSIMGFSNTLEMELSSTRLERPLEPQIQSVSNLTAGAPQAVPSLL 672 Query: 327 RGYSAPIRLDSDLT 368 SAP ++ S LT Sbjct: 673 ---SAPPKMVSSLT 683
>ISPG_XYLFT (Q87A73) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 417 Score = 30.4 bits (67), Expect = 4.8 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Frame = +3 Query: 333 YSAPIRLDSDLTESDLYFLLANDSDEFNR----WEAGQILARKLMFSLVADFQQQKTLAL 500 Y PIR+ ++ D L A DE NR W+A Q+L L+FS V ++ L L Sbjct: 146 YGKPIRIGANWGSLD-QMLAAQLMDENNRRKQPWDAAQVLREVLIFSAVGSAERAVELGL 204
>G6PI_SYNPX (Q7U6T0) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 551 Score = 30.0 bits (66), Expect = 6.2 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = -3 Query: 418 LLNSSESLASKKYKSLSV---RSESRRMGALYPLNKEGTGLSGTLLNINS 278 L + +L +SLS+ R ++RR+GAL L + G G L+NIN+ Sbjct: 421 LQGTRSALTEGGRQSLSISMRRFDARRLGALIALFERAVGFYGDLVNINA 470
>Y4RO_RHISN (P55648) Hypothetical 69.3 kDa protein y4rO| Length = 618 Score = 29.6 bits (65), Expect = 8.1 Identities = 18/69 (26%), Positives = 33/69 (47%) Frame = +3 Query: 435 ILARKLMFSLVADFQQQKTLALNTKFVDGLRAILRSTSLDKEFIAKAITLPGQGEIMDMM 614 ILAR + S +A QKT+ + ++ IL + E + + + PG G ++D+ Sbjct: 37 ILAR--LVSQLAQAGVQKTIVFALDGIGDVKRILNNRMKRMELVIRIMPTPGSGRLIDLA 94 Query: 615 SIADPDAVH 641 +I + H Sbjct: 95 TITEIAEFH 103
>G6PI_PROMM (Q7V7M6) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 551 Score = 29.6 bits (65), Expect = 8.1 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = -3 Query: 364 RSESRRMGALYPLNKEGTGLSGTLLNINS 278 R + RR+GAL L + GL G L+NIN+ Sbjct: 442 RFDPRRLGALVALFERAVGLYGELVNINA 470 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,068,101 Number of Sequences: 219361 Number of extensions: 1896920 Number of successful extensions: 5262 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 5044 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5256 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
