| Clone Name | bags22o08 |
|---|---|
| Clone Library Name | barley_pub |
>GDA1_SCHPO (Q9UT35) Guanosine-diphosphatase (EC 3.6.1.42) (GDPase)| Length = 556 Score = 33.9 bits (76), Expect = 0.41 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 3/31 (9%) Frame = +3 Query: 429 PRFVEDGHSRFDGTSEYKLDKNG---KIYQH 512 PRF DG S DG +Y LD NG ++YQH Sbjct: 296 PRFASDGESLVDGDHKYVLDYNGEQYELYQH 326
>KLF16_HUMAN (Q9BXK1) Krueppel-like factor 16 (Transcription factor BTEB4)| (Basic transcription element-binding protein 4) (BTE-binding protein 4) (Novel Sp1-like zinc finger transcription factor 2) (Transcription factor NSLP2) Length = 252 Score = 33.5 bits (75), Expect = 0.54 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = -2 Query: 201 PPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPAQG 46 PPAASG + + L D PG P +P + ++AASSP+ G Sbjct: 62 PPAASGPGPGAAAAPHLLAASILADLRGGPGAAPGGASPASSSSAASSPSSG 113
>SCNAA_RABIT (O97741) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 640 Score = 32.3 bits (72), Expect = 1.2 Identities = 24/60 (40%), Positives = 25/60 (41%), Gaps = 1/60 (1%) Frame = -2 Query: 231 WVPRRIRQGAPPAASGWRTPCSRSTSAFLPHPL-PDAESPPGTLP*SLAPRTEAAAASSP 55 W P R GA AS +P S S F PHP P P TLP SL A A P Sbjct: 570 WSPGRGAGGAREVAS---SPVSALPSRFCPHPTSPSVPQPGPTLPPSLTAPPPAYATLGP 626
>SCNAA_MOUSE (Q61180) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 699 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/60 (40%), Positives = 26/60 (43%) Frame = -2 Query: 231 WVPRRIRQGAPPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSPA 52 W P R +GA AS TP S S F PHP SPP +LP A A PA Sbjct: 620 WSPGRGARGAREVAS---TPASSFPSRFCPHP----TSPPPSLPQQGTTPPLALTAPPPA 672
>SCNAA_RAT (P37089) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 698 Score = 31.6 bits (70), Expect = 2.0 Identities = 20/44 (45%), Positives = 22/44 (50%) Frame = -2 Query: 231 WVPRRIRQGAPPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP 100 W P R +GA AS TP S S F PHP SPP +LP Sbjct: 620 WSPGRGARGAREVAS---TPASSFPSRFCPHP----TSPPPSLP 656
>CT165_MOUSE (Q9DA57) Protein C20orf165 homolog| Length = 226 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Frame = -2 Query: 201 PPAASGWRTPCSRSTSAFL-----PHPLPDAESPPGTLP*SLAPRTEAAAA 64 P + GW PCSRS + +L P PL PG LP S + AA+ Sbjct: 99 PLESLGWADPCSRSRAPYLGGPSRPRPLLLCGLSPGVLPISSEAGGKEAAS 149
>GFPT2_RAT (Q4KMC4) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] 2 (EC 2.6.1.16) (Hexosephosphate aminotransferase 2) (D-fructose-6-phosphate amidotransferase 2) (GFAT 2) (GFAT2) Length = 681 Score = 30.4 bits (67), Expect = 4.6 Identities = 14/52 (26%), Positives = 24/52 (46%) Frame = +3 Query: 360 IDIATIWQPVDNVIMVRWIVHGIPRFVEDGHSRFDGTSEYKLDKNGKIYQHK 515 +D+ ++ + RW HG+P V R D +E+ + NG I +K Sbjct: 75 MDLKVEFETHFGIAHTRWATHGVPNVVNSHPQRSDKDNEFVVIHNGIITNYK 126
>DAPA_ARCFU (O29352) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)| Length = 289 Score = 30.4 bits (67), Expect = 4.6 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 10/76 (13%) Frame = -3 Query: 380 PYSSNVNPQGLEENLAGKAQRPEYPFIAIN---------THEFTERIFE-DNIFSVNVKA 231 PY + N +GL ++ A P I N T E R+ E DNIF + + Sbjct: 102 PYYNKPNAEGLYQHYKAVASEVSIPIIVYNVPSRTGINTTPELVRRLAEIDNIFGIKEAS 161 Query: 230 GFLAEYVRELLPQRPD 183 G L + + E++ PD Sbjct: 162 GNLKQ-ISEIIRTTPD 176
>SOX14_DROME (P40656) Putative transcription factor SOX-14| Length = 472 Score = 30.0 bits (66), Expect = 6.0 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = -2 Query: 225 PRRIRQGAPPAASGWRTPCSRSTSAFLP-HPLPDAESPPGTLP*SLAPRTEAAAASSPA 52 P +R G P TP +T HP P A+S P TLP +P A++ SPA Sbjct: 13 PLSLRPGTVPTVPA-TTPARPATITIQRRHPAPKADSTPHTLP-PFSPSPSPASSPSPA 69
>GFPT2_MOUSE (Q9Z2Z9) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] 2 (EC 2.6.1.16) (Hexosephosphate aminotransferase 2) (D-fructose-6-phosphate amidotransferase 2) (GFAT 2) (GFAT2) Length = 681 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/52 (26%), Positives = 24/52 (46%) Frame = +3 Query: 360 IDIATIWQPVDNVIMVRWIVHGIPRFVEDGHSRFDGTSEYKLDKNGKIYQHK 515 +D+ ++ + RW HG+P V R D +E+ + NG I +K Sbjct: 75 MDLKVEFETHFGIAHTRWATHGVPNAVNSHPQRSDKDNEFVVIHNGIITNYK 126
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 29.6 bits (65), Expect = 7.8 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = -2 Query: 204 APPAASGWRTPCSRSTSAFLPHPLPDAESPPGTLP*SLAPRTEAAAASSP 55 +PPA +P S S++ P P A T+P S AP T + +P Sbjct: 216 SPPAPPKSTSPVSPSSAPMTSPPAPMAPKSSSTIPPSSAPMTSPPGSMAP 265
>MSHR_SEMEN (Q864I8) Melanocyte-stimulating hormone receptor (MSH-R)| (Melanotropin receptor) (Melanocortin receptor 1) (MC1-R) Length = 317 Score = 29.6 bits (65), Expect = 7.8 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 285 VGIDSYKRIFWALRFTGQIFFKALWIDIATIW 380 + +D Y IF+ALR+ + + W +A IW Sbjct: 138 IAVDRYISIFYALRYHSIVTLRRAWRVVAAIW 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,382,902 Number of Sequences: 219361 Number of extensions: 1916149 Number of successful extensions: 6792 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 6397 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6761 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)